表3.2.2 各类型RNA序列数统计表
Type C1 C2 C3 T1 T2 T3 sum
protein_coding 304879.849012 219941.226805 327414.357876 234193.802568 269188.954407 271984.735902 1.627603e+06
lncRNA 3401.887061 28068.827181 2765.434743 6573.903062 5597.544701 5352.734138 5.176033e+04
unprocessed_pseudogene 7497.518566 10763.098456 6630.635502 3610.568709 11922.771031 2926.617010 4.335121e+04
processed_pseudogene 4476.607906 3515.052777 4232.332338 8777.354706 9737.861141 12093.825995 4.283303e+04
misc_RNA 174.520913 12513.293000 168.859380 664.262914 216.722305 194.742767 1.393240e+04
transcribed_unprocessed_pseudogene 1038.551755 725.776437 1076.777185 1214.568882 950.117938 1130.919821 6.136712e+03
IG_C_gene 1278.069936 463.492343 84.036961 2559.824149 52.232295 299.685785 4.737341e+03
rRNA 43.982071 4101.741660 27.348308 150.440403 77.424551 104.000977 4.504938e+03
transcribed_processed_pseudogene 331.642463 256.620122 320.998889 758.743229 879.919949 937.125893 3.485051e+03
miRNA 226.825756 200.102090 232.299979 377.474027 478.688391 468.699052 1.984089e+03
snoRNA 185.615502 639.949726 160.786354 240.378454 254.830877 204.940206 1.686501e+03
IG_V_gene 447.559970 215.753504 90.517472 645.244990 1.217059 165.504875 1.565798e+03
IG_J_gene 281.829743 123.128595 1.658786 500.256252 0.000000 25.083900 9.319573e+02
TEC 118.495900 76.161802 107.165882 199.837189 231.025386 188.283467 9.209696e+02
snRNA 127.868479 353.629633 64.367145 119.341733 88.903067 90.247050 8.443571e+02
transcribed_unitary_pseudogene 72.297348 61.512157 68.211461 181.864574 244.355453 177.781015 8.060220e+02
ribozyme 5.581549 581.777527 1.559653 32.337807 1.583217 1.562616 6.244024e+02
polymorphic_pseudogene 74.591304 23.273261 49.623213 22.727776 8.645490 7.686012 1.865471e+02
rRNA_pseudogene 25.015913 15.329934 22.605960 13.682704 10.762249 17.950102 1.053469e+02
scaRNA 3.197648 44.419584 2.531959 8.549227 4.370620 3.473996 6.654303e+01
TR_C_gene 3.748898 6.834791 7.372383 8.313962 20.778308 7.118225 5.416657e+01
pseudogene 5.253120 2.586840 0.000000 10.158276 7.751847 8.414770 3.416485e+01
scRNA 0.000000 0.000000 0.000000 4.919362 15.436184 1.321710 2.167726e+01
IG_C_pseudogene 1.845220 4.199108 1.400334 7.062396 0.000000 4.679690 1.918675e+01
TR_J_gene 2.195181 3.121713 1.038729 6.806470 5.482255 0.000000 1.864435e+01
translated_processed_pseudogene 1.519612 1.924588 2.514473 1.975169 2.796593 4.295941 1.502638e+01
translated_unprocessed_pseudogene 0.000000 0.000000 0.000000 2.375128 3.526381 3.090665 8.992174e+00
IG_J_pseudogene 1.998443 0.000000 0.000000 3.329489 0.000000 0.000000 5.327932e+00
unitary_pseudogene 0.000000 0.000000 0.000000 0.000000 0.000000 1.172622 1.172622e+00
IG_V_pseudogene 1.121440 0.000000 0.000000 0.000000 0.000000 0.000000 1.121440e+00
vault_RNA 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000e+00
IG_pseudogene 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000e+00
TR_V_pseudogene 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000e+00
IG_D_gene 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000e+00
TR_D_gene 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000e+00
TR_J_pseudogene 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000e+00
TR_V_gene 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000e+00
sRNA 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000e+00