# emapper version: emapper-2.0.1 emapper DB: 2.0 # command: ./emapper.py -m diamond --seed_ortholog_evalue 0.00001 --data_dir /home/bayegy/Databases/emapper/data_dir2.0.1/ --cpu 45 --temp_dir /media/bayegy/disk0/binning_test/Bin_all/emapper//bin.T13.54/_tmp -i /media/bayegy/disk0/binning_test/Bin_all/Bin_prokka//bin.T13.54/bin.T13.54.faa -o /media/bayegy/disk0/binning_test/Bin_all/emapper//bin.T13.54/bin.T13.54 --usemem --override # time: Wed Nov 3 16:11:54 2021 #query_name seed_eggNOG_ortholog seed_ortholog_evalue seed_ortholog_score best_tax_level Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction taxonomic scope eggNOG OGs best eggNOG OG COG Functional cat. eggNOG free text desc. HGDHCNMN_00001 62928.azo1059 2.7e-17 95.9 Rhodocyclales Bacteria 1Q84V@1224,2KUGG@206389,2VJAQ@28216,COG0457@1,COG0457@2 NA|NA|NA S Domain of unknown function (DUF4440) HGDHCNMN_00002 1485544.JQKP01000001_gene1059 3.3e-65 255.8 Proteobacteria 2.7.7.65 ko:K03320,ko:K21021 ko02025,map02025 ko00000,ko00001,ko01000,ko02000 1.A.11 Bacteria 1R6AT@1224,COG2199@1,COG2199@2,COG3850@1,COG3850@2 NA|NA|NA T Diguanylate cyclase phosphodiesterase (GGDEF EAL domains) with PAS PAC sensor(S) HGDHCNMN_00003 1121035.AUCH01000003_gene1299 6.1e-200 703.4 Rhodocyclales pgk GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3,5.3.1.1 ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01015,R01512 RC00002,RC00043,RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 iSbBS512_1146.SbBS512_E3351 Bacteria 1MUNU@1224,2KUQV@206389,2VHJK@28216,COG0126@1,COG0126@2 NA|NA|NA F Belongs to the phosphoglycerate kinase family HGDHCNMN_00004 85643.Tmz1t_1496 1.1e-184 652.5 Rhodocyclales gapA 1.2.1.12,1.2.1.72 ko:K00134,ko:K03472 ko00010,ko00710,ko00750,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map00750,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00124,M00165,M00166,M00308,M00552 R01061,R01825 RC00149,RC00242 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 1MU93@1224,2KUIY@206389,2VHHG@28216,COG0057@1,COG0057@2 NA|NA|NA C Belongs to the glyceraldehyde-3-phosphate dehydrogenase family HGDHCNMN_00005 1123367.C666_01960 0.0 1189.5 Rhodocyclales tkt 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUEY@1224,2KV91@206389,2VHNX@28216,COG0021@1,COG0021@2 NA|NA|NA H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate HGDHCNMN_00007 365044.Pnap_0849 1.2e-42 181.4 Proteobacteria Bacteria 1P07C@1224,COG4642@1,COG4642@2 NA|NA|NA C Protein conserved in bacteria HGDHCNMN_00008 748247.AZKH_0978 1.8e-135 488.8 Rhodocyclales 2.7.1.19 ko:K00855 ko00710,ko01100,ko01120,ko01200,map00710,map01100,map01120,map01200 M00165,M00166 R01523 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWN9@1224,2KV0P@206389,2VHZD@28216,COG3954@1,COG3954@2 NA|NA|NA C Phosphoribulokinase HGDHCNMN_00009 62928.azo2833 3.1e-110 404.8 Rhodocyclales suhB_2 3.1.3.25,3.1.3.7 ko:K01082,ko:K01092 ko00521,ko00562,ko00920,ko01100,ko01120,ko01130,ko04070,map00521,map00562,map00920,map01100,map01120,map01130,map04070 M00131 R00188,R00508,R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 1NFR1@1224,2KV7Q@206389,2VMQ4@28216,COG0483@1,COG0483@2 NA|NA|NA G COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family HGDHCNMN_00010 1249627.D779_1391 1.1e-77 296.2 Chromatiales Bacteria 1R9YF@1224,1S37E@1236,1WWWB@135613,COG1225@1,COG1225@2 NA|NA|NA O PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen HGDHCNMN_00011 1123487.KB892868_gene1297 1.9e-77 295.8 Rhodocyclales rsmE GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 ko:K09761 ko00000,ko01000,ko03009 Bacteria 1MXCU@1224,2KW6H@206389,2VJS2@28216,COG1385@1,COG1385@2 NA|NA|NA J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit HGDHCNMN_00012 748247.AZKH_0982 1.1e-206 726.1 Rhodocyclales pap Bacteria 1MVE2@1224,2KU63@206389,2VGZV@28216,COG2326@1,COG2326@2 NA|NA|NA S Polyphosphate kinase 2 (PPK2) HGDHCNMN_00013 76114.ebA1090 4e-195 687.6 Rhodocyclales argA GO:0003674,GO:0003824,GO:0003991,GO:0004042,GO:0004358,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016407,GO:0016410,GO:0016597,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.7.2.8 ko:K00619,ko:K00930,ko:K14682 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R00259,R02649 RC00002,RC00004,RC00043,RC00064 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_2830,iLF82_1304.LF82_0116,iNRG857_1313.NRG857_13920,iYL1228.KPN_03226 Bacteria 1MUUP@1224,2KUN4@206389,2VGZC@28216,COG0548@1,COG0548@2,COG1246@1,COG1246@2 NA|NA|NA E Belongs to the acetyltransferase family. ArgA subfamily HGDHCNMN_00014 62928.azo2829 3.3e-127 462.2 Rhodocyclales ko:K13653 ko00000,ko03000 Bacteria 1RGCV@1224,2KUAH@206389,2WGQE@28216,COG2199@1,COG2199@2 NA|NA|NA T GGDEF domain HGDHCNMN_00015 85643.Tmz1t_1524 1.9e-40 171.4 Rhodocyclales yggX Bacteria 1MZ2V@1224,2KWXA@206389,2VTYU@28216,COG2924@1,COG2924@2 NA|NA|NA CO Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes HGDHCNMN_00016 1163617.SCD_n01642 1.7e-29 135.2 Betaproteobacteria flhB2 ko:K04061 ko00000,ko02044 Bacteria 1N7F1@1224,2VTYF@28216,COG2257@1,COG2257@2 NA|NA|NA N homolog of the cytoplasmic domain of flagellar protein FhlB HGDHCNMN_00017 497321.C664_18739 3.1e-89 335.5 Rhodocyclales fliK1 ko:K02414 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1N0CE@1224,2KW7V@206389,2VQG2@28216,COG3144@1,COG3144@2 NA|NA|NA N Flagellar hook-length control protein FliK HGDHCNMN_00018 1123487.KB892836_gene3099 1.3e-20 105.9 Rhodocyclales ko:K02423 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1NPSX@1224,2DK6J@1,2KXHC@206389,2VZ2E@28216,308QQ@2 NA|NA|NA N Flagellar protein FliT HGDHCNMN_00019 85643.Tmz1t_2890 6.7e-45 186.8 Rhodocyclales fliS GO:0001539,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 ko:K02422 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MZ3G@1224,2KX34@206389,2VU2S@28216,COG1516@1,COG1516@2 NA|NA|NA N Flagellar protein FliS HGDHCNMN_00020 497321.C664_18724 1.7e-60 240.4 Rhodocyclales fliD GO:0001539,GO:0005575,GO:0005576,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02407 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MUVP@1224,2KUJB@206389,2VHMK@28216,COG1345@1,COG1345@2 NA|NA|NA N Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end HGDHCNMN_00021 305700.B447_10163 3.9e-15 87.8 Rhodocyclales flaG ko:K06603 ko00000,ko02035 Bacteria 1NH9T@1224,2KXC0@206389,2VXXM@28216,COG1334@1,COG1334@2 NA|NA|NA N FlaG protein HGDHCNMN_00022 748247.AZKH_1429 1.9e-91 342.4 Rhodocyclales fliC GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 ko:K02406 ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134 ko00000,ko00001,ko02035 Bacteria 1MV1N@1224,2KW9R@206389,2VJTA@28216,COG1344@1,COG1344@2 NA|NA|NA N Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella HGDHCNMN_00023 85643.Tmz1t_2886 0.0 1512.7 Rhodocyclales sacB ko:K20444 ko00000,ko01000,ko01005,ko02000 4.D.1.3 GT2,GT4 Bacteria 1MX5Z@1224,2KVTA@206389,2VJUA@28216,COG0438@1,COG0438@2,COG1215@1,COG1215@2,COG1216@1,COG1216@2 NA|NA|NA M glycosyl transferase family 2 HGDHCNMN_00024 1121035.AUCH01000020_gene2626 6.4e-68 264.6 Rhodocyclales 4.2.1.46,5.1.3.2 ko:K01710,ko:K01784 ko00052,ko00520,ko00521,ko00523,ko00525,ko01055,ko01100,ko01130,map00052,map00520,map00521,map00523,map00525,map01055,map01100,map01130 M00361,M00362,M00632,M00793 R00291,R02984,R06513 RC00289,RC00402 ko00000,ko00001,ko00002,ko01000 Bacteria 1NYJW@1224,2KXUK@206389,2VPBE@28216,COG0451@1,COG0451@2 NA|NA|NA GM Male sterility protein HGDHCNMN_00025 794903.OPIT5_24145 1.4e-145 522.7 Bacteria 2.5.1.56 ko:K01654 ko00520,ko01100,map00520,map01100 R01804,R04435 RC00159 ko00000,ko00001,ko01000 iAF987.Gmet_0455 Bacteria COG2089@1,COG2089@2 NA|NA|NA M N-acylneuraminate-9-phosphate synthase activity HGDHCNMN_00026 351746.Pput_1485 2e-51 209.9 Gammaproteobacteria 4.2.1.115 ko:K15894 ko00520,map00520 R09697 RC02609 ko00000,ko00001,ko01000 Bacteria 1QZ5G@1224,1SZTR@1236,COG1086@1,COG1086@2 NA|NA|NA GM Methyltransferase FkbM domain HGDHCNMN_00027 1121035.AUCH01000020_gene2632 5e-246 857.1 Rhodocyclales ilvB2 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 Bacteria 1MYUS@1224,2KU67@206389,2VM1Y@28216,COG0028@1,COG0028@2 NA|NA|NA EH Thiamine pyrophosphate enzyme, central domain HGDHCNMN_00028 886293.Sinac_3930 5.9e-49 201.8 Planctomycetes 4.2.1.115 ko:K12710,ko:K15894 ko00520,ko00523,ko01130,map00520,map00523,map01130 M00795 R09697,R11020 RC00003,RC02609,RC03148 ko00000,ko00001,ko00002,ko01000 Bacteria 2J0E0@203682,COG1086@1,COG1086@2,COG2227@1,COG2227@2 NA|NA|NA H Methyltransferase domain HGDHCNMN_00029 85643.Tmz1t_2877 6.6e-230 803.1 Rhodocyclales rfbH 1.17.1.1,4.2.1.164 ko:K12452,ko:K13328 ko00520,ko00523,ko01130,map00520,map00523,map01130 M00802 R03391,R03392,R08930 RC00230,RC00704 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUPN@1224,2KVY5@206389,2VHA9@28216,COG0399@1,COG0399@2 NA|NA|NA E DegT/DnrJ/EryC1/StrS aminotransferase family HGDHCNMN_00030 85643.Tmz1t_2876 1.1e-163 582.8 Rhodocyclales rfbG 4.2.1.45 ko:K01709 ko00520,map00520 R02426 RC00402 ko00000,ko00001,ko01000 Bacteria 1MV73@1224,2KVIY@206389,2VI84@28216,COG0451@1,COG0451@2 NA|NA|NA M Male sterility protein HGDHCNMN_00031 85643.Tmz1t_2875 4.1e-128 464.2 Rhodocyclales rfbF 2.7.7.33 ko:K00978 ko00500,ko00520,ko01100,map00500,map00520,map01100 R00956 RC00002 ko00000,ko00001,ko01000 Bacteria 1MUYJ@1224,2KVDT@206389,2VIQG@28216,COG1208@1,COG1208@2 NA|NA|NA M Nucleotidyl transferase HGDHCNMN_00033 748247.AZKH_1737 6.6e-87 327.0 Rhodocyclales 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 R01334 RC00017 ko00000,ko00001,ko01000 Bacteria 1REXF@1224,2KXSA@206389,2VS3D@28216,COG0546@1,COG0546@2 NA|NA|NA S haloacid dehalogenase HGDHCNMN_00034 572477.Alvin_2439 5.3e-99 367.5 Chromatiales ygdL GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016829,GO:0016835,GO:0016836,GO:0030955,GO:0031402,GO:0031420,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0061503,GO:0061504,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.7.7.73,2.7.7.80 ko:K03148,ko:K21029,ko:K22132 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07459 RC00043 ko00000,ko00001,ko01000,ko03016 Bacteria 1MWXR@1224,1RMT3@1236,1WXXZ@135613,COG1179@1,COG1179@2 NA|NA|NA H PFAM UBA THIF-type NAD FAD binding HGDHCNMN_00035 1121035.AUCH01000009_gene882 2.4e-65 255.8 Rhodocyclales 3.4.24.75 ko:K08259 ko00000,ko01000,ko01002,ko01011 Bacteria 1MY2X@1224,2KW3F@206389,2VI8F@28216,COG0739@1,COG0739@2 NA|NA|NA M Peptidase family M23 HGDHCNMN_00036 748247.AZKH_3941 1.4e-28 132.5 Rhodocyclales cbiX 4.99.1.3,4.99.1.4 ko:K03794,ko:K03795 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02864,R05807 RC01012 ko00000,ko00001,ko00002,ko01000 Bacteria 1N00J@1224,2KX1I@206389,2VTXE@28216,COG2138@1,COG2138@2 NA|NA|NA S cobalamin (vitamin B12) biosynthesis CbiX protein HGDHCNMN_00037 765913.ThidrDRAFT_3341 1.1e-30 140.6 Chromatiales Bacteria 1R7VB@1224,1S026@1236,1WXCG@135613,COG0745@1,COG0745@2 NA|NA|NA T response regulator receiver HGDHCNMN_00038 748247.AZKH_3940 2.7e-74 285.8 Rhodocyclales Bacteria 1NQZ0@1224,2KUKR@206389,2VJAC@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family HGDHCNMN_00039 76114.ebA3873 0.0 1602.4 Rhodocyclales Bacteria 1MU48@1224,2KUP6@206389,2VI3F@28216,COG0841@1,COG0841@2 NA|NA|NA V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family HGDHCNMN_00040 76114.ebA3874 1.2e-24 118.6 Rhodocyclales Bacteria 1N6NN@1224,2KX5R@206389,2VVV9@28216,32YCZ@2,COG0607@1 NA|NA|NA P Protein of unknown function (DUF2892) HGDHCNMN_00041 1123487.KB892835_gene3599 1.1e-100 375.2 Rhodocyclales 2.7.13.3 ko:K11356 ko02020,map02020 ko00000,ko00001,ko01000,ko01001,ko02022 Bacteria 1NRP8@1224,2KW4J@206389,2VPUH@28216,COG0642@1,COG0642@2,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_00042 1123487.KB892835_gene3600 3.9e-85 321.6 Rhodocyclales Bacteria 1R7VB@1224,2KVAH@206389,2VI0D@28216,COG0745@1,COG0745@2 NA|NA|NA T Histidine kinase-like ATPase domain HGDHCNMN_00043 1304883.KI912532_gene449 1e-120 440.7 Rhodocyclales rsbP 3.1.3.3 ko:K07315,ko:K20977 ko02020,ko02025,map02020,map02025 M00820 ko00000,ko00001,ko00002,ko01000,ko02022,ko03021 Bacteria 1N4K5@1224,2KVU6@206389,2VKGP@28216,COG0745@1,COG0745@2,COG2208@1,COG2208@2 NA|NA|NA T Sigma factor PP2C-like phosphatases HGDHCNMN_00044 1121035.AUCH01000001_gene1816 9.6e-58 229.9 Rhodocyclales nasT ko:K07183,ko:K22010 M00839 ko00000,ko00002,ko02022 Bacteria 1MXDV@1224,2KW1T@206389,2VSMR@28216,COG3707@1,COG3707@2 NA|NA|NA T ANTAR HGDHCNMN_00045 1123487.KB892863_gene1967 5.2e-197 693.7 Rhodocyclales nasF ko:K02051,ko:K15576,ko:K15598,ko:K22067 ko00910,ko02010,map00910,map02010 M00188,M00438,M00442 ko00000,ko00001,ko00002,ko02000,ko02022 3.A.1.16,3.A.1.16.1,3.A.1.16.2,3.A.1.17,3.A.1.17.3,3.A.1.17.6 Bacteria 1MWDN@1224,2KUJ5@206389,2VIJH@28216,COG0715@1,COG0715@2 NA|NA|NA P COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components HGDHCNMN_00046 1000565.METUNv1_00281 4.9e-115 421.0 Rhodocyclales nasE ko:K15577 ko00910,ko02010,map00910,map02010 M00438 ko00000,ko00001,ko00002,ko02000 3.A.1.16.1,3.A.1.16.2 Bacteria 1MU6Q@1224,2KV7F@206389,2VH12@28216,COG0600@1,COG0600@2 NA|NA|NA P COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component HGDHCNMN_00047 1000565.METUNv1_00282 5.8e-122 443.7 Rhodocyclales nasD 3.6.3.36 ko:K02049,ko:K10831,ko:K11952,ko:K11953,ko:K15578,ko:K15579 ko00910,ko00920,ko02010,map00910,map00920,map02010 M00188,M00321,M00435,M00438 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.16,3.A.1.16.1,3.A.1.16.2,3.A.1.16.3,3.A.1.17,3.A.1.17.1,3.A.1.17.4 Bacteria 1MUDV@1224,2KU9N@206389,2VJXH@28216,COG1116@1,COG1116@2 NA|NA|NA P COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component HGDHCNMN_00049 1000565.METUNv1_00937 3.3e-82 311.2 Rhodocyclales sbp ko:K02048 ko00920,ko02010,map00920,map02010 M00185 ko00000,ko00001,ko00002,ko02000 3.A.1.6.1,3.A.1.6.3 Bacteria 1MUAU@1224,2KVPE@206389,2VIQZ@28216,COG1613@1,COG1613@2 NA|NA|NA P Bacterial extracellular solute-binding protein HGDHCNMN_00050 1123367.C666_00910 4.3e-123 447.6 Rhodocyclales cysT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02018,ko:K02046 ko00920,ko02010,map00920,map02010 M00185,M00189 ko00000,ko00001,ko00002,ko02000 3.A.1.6.1,3.A.1.6.3,3.A.1.8 iJN746.PP_5170 Bacteria 1QTTU@1224,2KV4D@206389,2VHKY@28216,COG0555@1,COG0555@2 NA|NA|NA P Sulfate ABC transporter inner membrane subunit CysT HGDHCNMN_00051 1000565.METUNv1_00926 1.7e-133 482.3 Rhodocyclales cysW ko:K02047 ko00920,ko02010,map00920,map02010 M00185 ko00000,ko00001,ko00002,ko02000 3.A.1.6.1,3.A.1.6.3 Bacteria 1MV8X@1224,2KV49@206389,2VI3S@28216,COG4208@1,COG4208@2 NA|NA|NA P Sulfate ABC transporter inner membrane subunit CysW HGDHCNMN_00052 1123367.C666_00920 1.2e-160 572.8 Rhodocyclales cysA GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008272,GO:0015698,GO:0016020,GO:0040007,GO:0044464,GO:0051179,GO:0051234,GO:0071944,GO:0072348 3.6.3.25,3.6.3.29 ko:K02017,ko:K02045,ko:K10112 ko00920,ko02010,map00920,map02010 M00185,M00189,M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.1,3.A.1.6.1,3.A.1.6.3,3.A.1.8 Bacteria 1QTTT@1224,2KUZ0@206389,2VH92@28216,COG1118@1,COG1118@2 NA|NA|NA P Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system HGDHCNMN_00053 323848.Nmul_A1739 1.7e-131 475.7 Nitrosomonadales cbl ko:K13634,ko:K13635 ko00000,ko03000 Bacteria 1MU8N@1224,2VHQY@28216,371UV@32003,COG0583@1,COG0583@2 NA|NA|NA K Bacterial regulatory helix-turn-helix protein, lysR family HGDHCNMN_00054 1127673.GLIP_0373 5.2e-68 264.2 Gammaproteobacteria Bacteria 1N0PI@1224,1SRAI@1236,2EN5S@1,33FTP@2 NA|NA|NA HGDHCNMN_00055 118166.JH976537_gene462 2.3e-07 62.0 Oscillatoriales Bacteria 1GDZF@1117,1HFPR@1150,2C83S@1,33WUK@2 NA|NA|NA HGDHCNMN_00056 1202962.KB907154_gene654 3.6e-96 358.2 Gammaproteobacteria Bacteria 1MVNP@1224,1S1DY@1236,28MDW@1,2ZARP@2 NA|NA|NA S Bacteriophage abortive infection AbiH HGDHCNMN_00057 946483.Cenrod_2252 4.4e-91 340.9 Proteobacteria Bacteria 1NWXC@1224,2DVZ9@1,33XTK@2 NA|NA|NA HGDHCNMN_00058 305700.B447_13764 3.7e-98 364.4 Rhodocyclales sufS 2.8.1.7,4.4.1.16 ko:K11717 ko00450,ko01100,map00450,map01100 R03599,R11528 RC00961,RC01789,RC02313 ko00000,ko00001,ko01000 Bacteria 1MUPD@1224,2KUXB@206389,2VIQW@28216,COG0520@1,COG0520@2 NA|NA|NA E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine HGDHCNMN_00059 187272.Mlg_2451 1.4e-98 367.1 Chromatiales ko:K02044 ko02010,map02010 M00223 ko00000,ko00001,ko00002,ko02000 3.A.1.9 Bacteria 1MU2C@1224,1RM8A@1236,1WVV9@135613,COG3221@1,COG3221@2,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase HGDHCNMN_00060 62928.azo0063 5e-10 70.9 Bacteria Bacteria COG2361@1,COG2361@2 NA|NA|NA S Protein of unknown function DUF86 HGDHCNMN_00061 84531.JMTZ01000033_gene255 2.9e-122 445.3 Xanthomonadales metXA 2.3.1.31 ko:K00641 ko00270,ko01100,ko01130,map00270,map01100,map01130 R01776 RC00004,RC00041 ko00000,ko00001,ko01000 Bacteria 1MVJV@1224,1RQ2N@1236,1X47D@135614,COG2021@1,COG2021@2 NA|NA|NA E Transfers a succinyl group from succinyl-CoA to L- serine, forming succinyl-L-serine HGDHCNMN_00062 395961.Cyan7425_2860 4e-208 730.7 Cyanobacteria metY 2.5.1.49 ko:K01740 ko00270,ko01100,map00270,map01100 R01287,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 iNJ661.Rv3340 Bacteria 1G4EH@1117,COG2873@1,COG2873@2 NA|NA|NA E O-acetylhomoserine sulfhydrylase HGDHCNMN_00063 316057.RPD_3222 3.5e-212 744.2 Bradyrhizobiaceae phaE 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 R02539 RC00004,RC00014 ko00000,ko00001,ko01000 Bacteria 1MV1W@1224,2TRVF@28211,3K2QU@41294,COG1541@1,COG1541@2 NA|NA|NA H AMP-binding enzyme C-terminal domain HGDHCNMN_00064 640081.Dsui_2064 3.6e-114 417.9 Rhodocyclales metQ ko:K02073 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 1MUVY@1224,2KYKQ@206389,2VH5P@28216,COG1464@1,COG1464@2 NA|NA|NA M Belongs to the nlpA lipoprotein family HGDHCNMN_00065 640081.Dsui_2067 1.1e-87 329.7 Rhodocyclales metI ko:K02072 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 1MW8E@1224,2KYV4@206389,2VHYT@28216,COG2011@1,COG2011@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component HGDHCNMN_00066 640081.Dsui_2068 2.3e-100 372.1 Rhodocyclales metN GO:0000099,GO:0000101,GO:0000166,GO:0003333,GO:0003674,GO:0003824,GO:0005215,GO:0005342,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008144,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015191,GO:0015238,GO:0015318,GO:0015399,GO:0015405,GO:0015711,GO:0015807,GO:0015821,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034220,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042940,GO:0042943,GO:0043167,GO:0043168,GO:0043190,GO:0043492,GO:0043865,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0048473,GO:0048474,GO:0050896,GO:0051179,GO:0051234,GO:0055052,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0097159,GO:0097367,GO:0098533,GO:0098655,GO:0098656,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1901682,GO:1902475,GO:1902494,GO:1902495,GO:1903825,GO:1904949,GO:1905039,GO:1990351 ko:K02071 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 iAF1260.b0199,iBWG_1329.BWG_0192,iECDH10B_1368.ECDH10B_0180,iECDH1ME8569_1439.ECDH1ME8569_0193,iECP_1309.ECP_0209,iEcDH1_1363.EcDH1_3403,iEcSMS35_1347.EcSMS35_0211,iJO1366.b0199,iJR904.b0199,iUMNK88_1353.UMNK88_205,iY75_1357.Y75_RS01010 Bacteria 1QTTK@1224,2KYEI@206389,2VJ0S@28216,COG1135@1,COG1135@2 NA|NA|NA P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system HGDHCNMN_00067 748247.AZKH_3252 6.8e-79 300.4 Rhodocyclales ko:K07002 ko00000 Bacteria 1RDB7@1224,2KWGZ@206389,2VTCX@28216,COG3545@1,COG3545@2 NA|NA|NA S esterase of the alpha beta hydrolase fold HGDHCNMN_00068 279714.FuraDRAFT_1845 9e-152 543.1 Neisseriales sbp GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006790,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008152,GO:0008272,GO:0009987,GO:0015698,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043167,GO:0043168,GO:0043199,GO:0044237,GO:0044464,GO:0051179,GO:0051234,GO:0072348,GO:1901681 ko:K02048 ko00920,ko02010,map00920,map02010 M00185 ko00000,ko00001,ko00002,ko02000 3.A.1.6.1,3.A.1.6.3 ic_1306.c4869 Bacteria 1MUAU@1224,2KQ05@206351,2VIQZ@28216,COG1613@1,COG1613@2 NA|NA|NA P Sulfate ABC transporter, sulfate-binding protein HGDHCNMN_00069 497321.C664_14164 9.1e-53 213.0 Rhodocyclales Bacteria 1RH66@1224,2AFCJ@1,2KWN8@206389,2VSTN@28216,315C6@2 NA|NA|NA S Domain of unknown function (DUF1841) HGDHCNMN_00070 497321.C664_14169 1e-92 346.3 Rhodocyclales nth GO:0000702,GO:0000703,GO:0003674,GO:0003824,GO:0003906,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0034644,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0090304,GO:0104004,GO:0140097,GO:1901360 4.2.99.18 ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MUYQ@1224,2KUZB@206389,2VIRB@28216,COG0177@1,COG0177@2 NA|NA|NA L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate HGDHCNMN_00071 76114.ebA4878 2.1e-83 315.5 Rhodocyclales rnfE ko:K03613 ko00000 Bacteria 1MW6N@1224,2KU9D@206389,2VNWT@28216,COG4660@1,COG4660@2 NA|NA|NA C Part of a membrane complex involved in electron transport HGDHCNMN_00072 748247.AZKH_1799 3.2e-65 255.0 Rhodocyclales rnfG GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03612 ko00000 Bacteria 1RDEP@1224,2KVKH@206389,2VS39@28216,COG4659@1,COG4659@2 NA|NA|NA C Part of a membrane complex involved in electron transport HGDHCNMN_00073 748247.AZKH_1800 5.1e-110 404.4 Rhodocyclales rnfD GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0044464,GO:0055114,GO:0071944 1.6.5.8 ko:K00347,ko:K03614 ko00000,ko01000 Bacteria 1MVY6@1224,2KUDZ@206389,2VJZJ@28216,COG4658@1,COG4658@2 NA|NA|NA C Part of a membrane complex involved in electron transport HGDHCNMN_00074 85643.Tmz1t_3234 8e-185 653.7 Rhodocyclales rnfC GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0055114 ko:K03615 ko00000 Bacteria 1PJVF@1224,2KUV4@206389,2VM4P@28216,COG4656@1,COG4656@2 NA|NA|NA C Part of a membrane complex involved in electron transport HGDHCNMN_00075 1502770.JQMG01000001_gene405 5.3e-16 90.9 Nitrosomonadales rnfB GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0055114 1.12.98.1 ko:K00441,ko:K03616 ko00680,ko01100,ko01120,map00680,map01100,map01120 R03025 RC02628 ko00000,ko00001,ko01000 Bacteria 1MUWU@1224,2KMT4@206350,2VN5I@28216,COG2878@1,COG2878@2 NA|NA|NA C Part of a membrane complex involved in electron transport HGDHCNMN_00076 1123367.C666_17810 4.9e-68 264.2 Rhodocyclales apt 2.4.2.22,2.4.2.7 ko:K00759,ko:K03816,ko:K09685 ko00230,ko01100,ko01110,map00230,map01100,map01110 R00190,R01229,R02142,R04378 RC00063,RC00122 ko00000,ko00001,ko01000,ko03000,ko04147 Bacteria 1MZT7@1224,2KYEA@206389,2VVH2@28216,COG0503@1,COG0503@2 NA|NA|NA F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis HGDHCNMN_00077 640081.Dsui_1230 7.4e-117 427.6 Rhodocyclales Bacteria 1PNJV@1224,2KVEI@206389,2VI8H@28216,COG2358@1,COG2358@2 NA|NA|NA S NMT1-like family HGDHCNMN_00078 497321.C664_03625 2.1e-121 442.2 Rhodocyclales dusC GO:0000049,GO:0000166,GO:0002943,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010181,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0032553,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363 ko:K05541 ko00000,ko01000,ko03016 Bacteria 1MUSM@1224,2KVTR@206389,2VHWD@28216,COG0042@1,COG0042@2 NA|NA|NA J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs HGDHCNMN_00079 62928.azo1523 5e-109 400.6 Rhodocyclales yggH 2.1.1.33 ko:K03439 ko00000,ko01000,ko03016 Bacteria 1RE0G@1224,2KW22@206389,2VQEM@28216,COG0220@1,COG0220@2 NA|NA|NA H Methyltransferase HGDHCNMN_00080 85643.Tmz1t_2000 7.3e-55 220.7 Rhodocyclales secA GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 ko:K03070,ko:K07039 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 Bacteria 1R4KR@1224,2KX51@206389,2VHV9@28216,COG0653@1,COG0653@2,COG3318@1,COG3318@2 NA|NA|NA U metal-binding protein related to the C-terminal domain of SecA HGDHCNMN_00081 375451.RD1_B0055 3.6e-165 588.6 Roseobacter Bacteria 1MV2W@1224,2P3KE@2433,2TRT8@28211,COG1835@1,COG1835@2 NA|NA|NA I Acyltransferase family HGDHCNMN_00082 1123367.C666_09440 1.4e-26 125.2 Rhodocyclales ko:K06940 ko00000 Bacteria 1N027@1224,2KX3M@206389,2VU3Y@28216,COG0727@1,COG0727@2 NA|NA|NA S Putative zinc- or iron-chelating domain HGDHCNMN_00083 1286631.X805_40860 1.5e-51 209.1 unclassified Burkholderiales ygaU GO:0003674,GO:0005488,GO:0008150,GO:0010035,GO:0010038,GO:0030955,GO:0031420,GO:0035864,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896 Bacteria 1KM1Q@119065,1RD8K@1224,2VR7C@28216,COG1652@1,COG1652@2 NA|NA|NA S Lysin motif HGDHCNMN_00084 1304883.KI912532_gene212 2.8e-18 97.4 Rhodocyclales yaaA GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K14761 ko00000,ko03009 Bacteria 1N7NW@1224,2KXFJ@206389,2VVQY@28216,COG2501@1,COG2501@2 NA|NA|NA S S4 domain HGDHCNMN_00085 497321.C664_02155 2e-69 268.9 Rhodocyclales gst GO:0000302,GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0009636,GO:0010035,GO:0016740,GO:0016765,GO:0042221,GO:0042493,GO:0042542,GO:0044424,GO:0044464,GO:0046677,GO:0050896,GO:1901700 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 Bacteria 1MY47@1224,2KWAP@206389,2VI89@28216,COG0625@1,COG0625@2 NA|NA|NA O Belongs to the GST superfamily HGDHCNMN_00086 1163617.SCD_n01941 3.9e-47 194.1 Betaproteobacteria ychJ ko:K09858 ko00000 Bacteria 1MZZK@1224,2VTZE@28216,COG3012@1,COG3012@2 NA|NA|NA S Belongs to the UPF0225 family HGDHCNMN_00087 159087.Daro_3308 2.5e-299 1034.6 Rhodocyclales Bacteria 1NRP8@1224,2KVI5@206389,2VK78@28216,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_00088 62928.azo3946 7.2e-30 136.7 Rhodocyclales Bacteria 1N97G@1224,2KX9A@206389,2VW8Q@28216,COG3437@1,COG3437@2 NA|NA|NA T cheY-homologous receiver domain HGDHCNMN_00089 1304883.KI912532_gene2037 0.0 1607.8 Rhodocyclales acnB GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006417,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009060,GO:0009062,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019222,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0031323,GO:0031326,GO:0032268,GO:0032787,GO:0034248,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046395,GO:0046459,GO:0046487,GO:0047456,GO:0048037,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0060255,GO:0065007,GO:0071704,GO:0072329,GO:0072350,GO:0080090,GO:0097159,GO:1901363,GO:1901575,GO:2000112 4.2.1.3,4.2.1.99 ko:K01682 ko00020,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173 R01324,R01325,R01900,R04425 RC00497,RC00498,RC00618,RC01153 br01601,ko00000,ko00001,ko00002,ko01000 iECIAI1_1343.ECIAI1_0116,iPC815.YPO3415 Bacteria 1MVCR@1224,2KUV7@206389,2VHT2@28216,COG1049@1,COG1049@2 NA|NA|NA C Belongs to the aconitase IPM isomerase family HGDHCNMN_00090 395964.KE386496_gene587 1.1e-120 439.9 Beijerinckiaceae MA20_43170 ko:K06911 ko00000 Bacteria 1QV1F@1224,2TWHJ@28211,3NAHU@45404,COG0247@1,COG0247@2 NA|NA|NA C 4Fe-4S dicluster domain HGDHCNMN_00091 1123367.C666_04875 4.7e-79 300.8 Rhodocyclales cinA 3.5.1.42 ko:K03742 ko00760,map00760 R02322 RC00100 ko00000,ko00001,ko01000 Bacteria 1MVG6@1224,2KUEQ@206389,2VHTD@28216,COG1058@1,COG1058@2 NA|NA|NA S Molybdopterin binding HGDHCNMN_00092 349521.HCH_00195 3.2e-14 84.7 Oceanospirillales Bacteria 1MZF2@1224,1S9F7@1236,1XKU8@135619,2DN81@1,32W0Z@2 NA|NA|NA HGDHCNMN_00093 75379.Tint_0533 7.6e-12 77.4 Betaproteobacteria Bacteria 1N4M8@1224,2C0C4@1,2VUYC@28216,32WYX@2 NA|NA|NA HGDHCNMN_00094 159087.Daro_0911 3.9e-151 540.8 Rhodocyclales mhpC 3.7.1.14,3.7.1.17 ko:K05714,ko:K16050,ko:K18092 ko00360,ko00642,ko00984,ko01100,ko01120,ko01220,map00360,map00642,map00984,map01100,map01120,map01220 M00545 R02603,R05366,R06789,R09883 RC00752,RC00753,RC01337,RC02018,RC02740 br01602,ko00000,ko00001,ko00002,ko01000 Bacteria 1P3EB@1224,2KY6B@206389,2VIUP@28216,COG2267@1,COG2267@2 NA|NA|NA F Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid HGDHCNMN_00095 1304883.KI912532_gene865 1.2e-222 779.2 Rhodocyclales Bacteria 1MUNM@1224,28I8B@1,2KUFX@206389,2VKHA@28216,2Z8B5@2 NA|NA|NA C Cytochrome c bacterial HGDHCNMN_00096 748247.AZKH_2371 1.3e-73 282.7 Rhodocyclales ko:K03620 ko02020,map02020 ko00000,ko00001 Bacteria 1R5GN@1224,2KXEJ@206389,2VP9C@28216,COG4117@1,COG4117@2 NA|NA|NA C Cytochrome b/b6/petB HGDHCNMN_00097 338969.Rfer_3633 2.5e-226 791.6 Betaproteobacteria Bacteria 1N0B7@1224,2C99Z@1,2W15Y@28216,2Z9YV@2 NA|NA|NA S Protein of unknown function (DUF3373) HGDHCNMN_00098 1304883.KI912532_gene862 4.2e-26 124.0 Betaproteobacteria Bacteria 1NEPZ@1224,2E66J@1,2W4M5@28216,330V5@2 NA|NA|NA HGDHCNMN_00099 159087.Daro_4075 2.1e-96 359.0 Rhodocyclales Bacteria 1QQY8@1224,2KWB6@206389,2VN44@28216,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family HGDHCNMN_00100 159087.Daro_4076 6.3e-27 126.7 Betaproteobacteria pchB 4.2.99.21 ko:K04782 ko01053,ko01110,ko01130,map01053,map01110,map01130 R06602 RC01549,RC02148 ko00000,ko00001,ko01000 Bacteria 1N6UE@1224,2VUV5@28216,COG1605@1,COG1605@2 NA|NA|NA E chorismate mutase HGDHCNMN_00101 1000565.METUNv1_01346 1.9e-32 145.6 Betaproteobacteria 3.6.1.55,3.6.1.67 ko:K03207,ko:K03574,ko:K19965 ko00790,map00790 M00126 R04638 RC00002 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1MZDA@1224,2VU61@28216,COG1051@1,COG1051@2 NA|NA|NA F Hydrolase HGDHCNMN_00102 748247.AZKH_1582 2.6e-90 338.2 Rhodocyclales maf ko:K07023 ko00000 Bacteria 1MXEZ@1224,2KXEU@206389,2VT7X@28216,COG1896@1,COG1896@2 NA|NA|NA S HD domain HGDHCNMN_00103 1088868.CIN_04240 4.9e-21 107.8 Alphaproteobacteria aacA4_1 4.1.1.17 ko:K01581 ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130 M00134 R00670 RC00299 ko00000,ko00001,ko00002,ko01000 Bacteria 1N81E@1224,2UA5A@28211,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase GNAT family HGDHCNMN_00104 159087.Daro_3214 0.0 1367.8 Rhodocyclales ycaO GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018193,GO:0018197,GO:0018198,GO:0018339,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0047429,GO:0047693,GO:0071704,GO:1901564 ko:K07397,ko:K09136 ko00000,ko03009 Bacteria 1MV7K@1224,2KV2Z@206389,2VHZY@28216,COG1765@1,COG1765@2,COG1944@1,COG1944@2 NA|NA|NA O redox protein, regulator of disulfide bond formation HGDHCNMN_00105 497321.C664_06733 6e-111 407.9 Rhodocyclales ko:K19168 ko00000,ko02048 Bacteria 1R7HC@1224,2KVZI@206389,2VNJ7@28216,COG2199@1,COG3706@2 NA|NA|NA T diguanylate cyclase HGDHCNMN_00106 497321.C664_18679 2e-282 978.0 Rhodocyclales lpdA GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006103,GO:0006139,GO:0006163,GO:0006164,GO:0006520,GO:0006544,GO:0006546,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009071,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015036,GO:0016054,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0017144,GO:0018130,GO:0019438,GO:0019464,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0045250,GO:0045254,GO:0046390,GO:0046395,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0065007,GO:0065008,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902494,GO:1990204 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 iAPECO1_1312.APECO1_1869,iEcolC_1368.EcolC_3543,iPC815.YPO3417,iSFV_1184.SFV_0107,iUMN146_1321.UM146_23385 Bacteria 1MU2U@1224,2KUBK@206389,2VI6G@28216,COG1249@1,COG1249@2 NA|NA|NA C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes HGDHCNMN_00107 1123367.C666_12275 1.7e-232 812.0 Rhodocyclales aceF 2.3.1.12 ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00209,R02569 RC00004,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1MU7K@1224,2KV9Z@206389,2VIHA@28216,COG0508@1,COG0508@2 NA|NA|NA C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) HGDHCNMN_00108 62928.azo1373 0.0 1607.8 Rhodocyclales aceE GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 ko:K00163 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 e_coli_core.b0114,iAF1260.b0114,iBWG_1329.BWG_0107,iE2348C_1286.E2348C_0117,iEC55989_1330.EC55989_0107,iECDH10B_1368.ECDH10B_0094,iECDH1ME8569_1439.ECDH1ME8569_0108,iECH74115_1262.ECH74115_0121,iECIAI1_1343.ECIAI1_0112,iECNA114_1301.ECNA114_0106,iECO103_1326.ECO103_0114,iECO111_1330.ECO111_0115,iECO26_1355.ECO26_0116,iECSE_1348.ECSE_0114,iECSF_1327.ECSF_0127,iECSP_1301.ECSP_0115,iECUMN_1333.ECUMN_0111,iECW_1372.ECW_m0111,iECs_1301.ECs0118,iEKO11_1354.EKO11_3802,iETEC_1333.ETEC_0110,iEcDH1_1363.EcDH1_3488,iEcE24377_1341.EcE24377A_0116,iEcHS_1320.EcHS_A0118,iEcSMS35_1347.EcSMS35_0124,iEcolC_1368.EcolC_3545,iG2583_1286.G2583_0118,iJN746.PP_0339,iJO1366.b0114,iJR904.b0114,iUMNK88_1353.UMNK88_112,iWFL_1372.ECW_m0111,iY75_1357.Y75_RS00580,iZ_1308.Z0124 Bacteria 1MV21@1224,2KU6Z@206389,2VIAH@28216,COG2609@1,COG2609@2 NA|NA|NA C Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) HGDHCNMN_00109 76114.ebA127 2.6e-150 538.5 Rhodocyclales braC ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MX94@1224,2KUMF@206389,2VHQ4@28216,COG0683@1,COG0683@2 NA|NA|NA E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component HGDHCNMN_00110 522306.CAP2UW1_3091 1.4e-71 277.3 Betaproteobacteria Bacteria 1PWQN@1224,2W0G0@28216,COG1262@1,COG1262@2 NA|NA|NA S Sulfatase-modifying factor enzyme 1 HGDHCNMN_00111 748247.AZKH_1449 0.0 1226.8 Rhodocyclales fixL 2.7.13.3 ko:K02482,ko:K11711,ko:K14986 ko02020,map02020 M00524 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1RCM9@1224,2KUQP@206389,2VI6T@28216,COG2202@1,COG2202@2,COG3452@1,COG3452@2,COG3829@1,COG3829@2,COG4191@1,COG4191@2 NA|NA|NA T COG2202 FOG PAS PAC domain HGDHCNMN_00112 62928.azo1376 2.7e-77 295.0 Rhodocyclales ko:K13041 ko02020,map02020 M00514 ko00000,ko00001,ko00002,ko02022 Bacteria 1N6WR@1224,2KW2G@206389,2VM61@28216,COG4566@1,COG4566@2 NA|NA|NA K LuxR family transcriptional regulator HGDHCNMN_00113 76114.ebA122 1e-278 965.7 Rhodocyclales iorA 1.2.7.8 ko:K00179,ko:K08941 M00598 br01601,ko00000,ko00002,ko00194,ko01000 Bacteria 1MUKS@1224,2KVHZ@206389,2VK1K@28216,COG4231@1,COG4231@2 NA|NA|NA C catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates HGDHCNMN_00114 85643.Tmz1t_1097 8e-71 273.5 Rhodocyclales 1.2.7.8 ko:K00180 br01601,ko00000,ko01000 Bacteria 1RH9B@1224,2KW64@206389,2VKDF@28216,COG1014@1,COG1014@2 NA|NA|NA C Pyruvate ferredoxin/flavodoxin oxidoreductase HGDHCNMN_00116 1300350.DSW25_13525 1.6e-10 71.6 Alphaproteobacteria alpA ko:K07733 ko00000,ko03000 Bacteria 1NGB9@1224,2UJGH@28211,COG3311@1,COG3311@2 NA|NA|NA K Prophage CP4-57 regulatory protein (AlpA) HGDHCNMN_00117 1235457.C404_24710 1.8e-157 562.4 Burkholderiaceae Bacteria 1KFH3@119060,1MU23@1224,2VHG5@28216,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family HGDHCNMN_00119 381666.H16_A0786 2.3e-63 248.8 Burkholderiaceae gph GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006040,GO:0006082,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009254,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019752,GO:0030203,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097172,GO:1901135,GO:1901360,GO:1901564 3.1.3.105,3.1.3.18 ko:K01091,ko:K22292 ko00520,ko00630,ko01100,ko01110,ko01130,map00520,map00630,map01100,map01110,map01130 R01334,R11785 RC00017 ko00000,ko00001,ko01000 Bacteria 1JZZC@119060,1RCXJ@1224,2VS13@28216,COG0546@1,COG0546@2 NA|NA|NA G Phosphoglycolate phosphatase HGDHCNMN_00120 305700.B447_17983 3.3e-105 387.9 Rhodocyclales ubiG 2.1.1.222,2.1.1.64 ko:K00568 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04988,R05614,R08769,R08781 RC00003,RC00392,RC01895 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU89@1224,2KVHW@206389,2VHGP@28216,COG2227@1,COG2227@2 NA|NA|NA H O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway HGDHCNMN_00121 62928.azo2588 1e-83 316.6 Rhodocyclales ompA ko:K03286 ko00000,ko02000 1.B.6 Bacteria 1N6EM@1224,2KW20@206389,2VM27@28216,COG2885@1,COG2885@2 NA|NA|NA M Belongs to the ompA family HGDHCNMN_00122 748247.AZKH_3562 1.3e-161 576.2 Rhodocyclales mtaD 3.5.4.28,3.5.4.31 ko:K12960 ko00270,ko01100,map00270,map01100 R09660 RC00477 ko00000,ko00001,ko01000 Bacteria 1MVPA@1224,2KV5W@206389,2VJ4R@28216,COG0402@1,COG0402@2 NA|NA|NA F Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine HGDHCNMN_00123 748247.AZKH_3561 9.9e-60 236.9 Rhodocyclales ompA ko:K03286 ko00000,ko02000 1.B.6 Bacteria 1N6EM@1224,2KYX2@206389,2VM27@28216,COG2885@1,COG2885@2 NA|NA|NA M OmpA family HGDHCNMN_00124 76114.ebA909 0.0 1422.9 Rhodocyclales gyrA GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0032774,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042493,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097659,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 ko:K02469,ko:K02621 ko00000,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 1MUGG@1224,2KV41@206389,2VJ5Q@28216,COG0188@1,COG0188@2 NA|NA|NA L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner HGDHCNMN_00125 1121035.AUCH01000001_gene2098 8e-138 496.9 Rhodocyclales serC GO:0003674,GO:0003824,GO:0004648,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006520,GO:0006553,GO:0006563,GO:0006564,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009085,GO:0009089,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019752,GO:0019842,GO:0030170,GO:0033359,GO:0034641,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046394,GO:0046451,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901615,GO:1901617 2.6.1.52 ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 M00020,M00124 R04173,R05085 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 iEcE24377_1341.EcE24377A_1004,iPC815.YPO1389,iYL1228.KPN_00935 Bacteria 1MUB5@1224,2KUSN@206389,2VH5M@28216,COG1932@1,COG1932@2 NA|NA|NA E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine HGDHCNMN_00126 640081.Dsui_1940 2.9e-156 558.1 Rhodocyclales pheA GO:0003674,GO:0003824,GO:0004106,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 1.3.1.12,2.3.1.79,4.2.1.51,4.2.1.91,5.4.99.5 ko:K00661,ko:K01713,ko:K04092,ko:K04093,ko:K04516,ko:K04518,ko:K14170,ko:K14187 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00024,M00025 R00691,R01373,R01715,R01728 RC00125,RC00360,RC03116 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_2667 Bacteria 1MU60@1224,2KUSW@206389,2VJEV@28216,COG0077@1,COG0077@2,COG1605@1,COG1605@2 NA|NA|NA E chorismate mutase HGDHCNMN_00127 497321.C664_10987 2.6e-152 545.0 Rhodocyclales hisC 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MW7I@1224,2KV2R@206389,2VIPQ@28216,COG0079@1,COG0079@2 NA|NA|NA E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily HGDHCNMN_00128 76114.ebA905 8.2e-120 436.8 Rhodocyclales aroA GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0047794,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.3.1.12,1.3.1.43,2.5.1.19 ko:K00210,ko:K00220,ko:K00800,ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00022,M00025,M00040 R00732,R01728,R03460 RC00125,RC00350 ko00000,ko00001,ko00002,ko01000 Bacteria 1QTZA@1224,2KU90@206389,2VIS1@28216,COG0287@1,COG0287@2 NA|NA|NA E Prephenate dehydrogenase HGDHCNMN_00129 742727.HMPREF9447_04434 8e-09 66.2 Bacteroidaceae Bacteria 2FPEC@200643,4AKUZ@815,4NFE8@976,COG3250@1,COG3250@2 NA|NA|NA G Glycosyl hydrolase family 2, sugar binding domain protein HGDHCNMN_00130 497321.C664_13529 6.3e-56 223.4 Rhodocyclales rplS GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02884 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RH3A@1224,2KWCD@206389,2VR2S@28216,COG0335@1,COG0335@2 NA|NA|NA J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site HGDHCNMN_00131 62928.azo1197 1.5e-133 482.3 Rhodocyclales folE2 3.5.4.16 ko:K09007 ko00790,ko01100,map00790,map01100 M00126 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV1B@1224,2KV79@206389,2VIC9@28216,COG1469@1,COG1469@2 NA|NA|NA S Converts GTP to 7,8-dihydroneopterin triphosphate HGDHCNMN_00133 76114.ebA4440 2.8e-112 411.8 Rhodocyclales ispA GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0071704,GO:1901576 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 ko:K00795,ko:K02523,ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00366 R01658,R02003,R02061,R09248 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 1MWNG@1224,2KV0J@206389,2VHQV@28216,COG0142@1,COG0142@2 NA|NA|NA H Belongs to the FPP GGPP synthase family HGDHCNMN_00134 85643.Tmz1t_1776 3.1e-12 77.4 Rhodocyclales xseB GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1PTYP@1224,2KXDM@206389,2VVQV@28216,COG1722@1,COG1722@2 NA|NA|NA L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides HGDHCNMN_00135 62928.azo1201 1.4e-182 645.6 Rhodocyclales alcE 1.14.15.7 ko:K00479,ko:K00499 ko00260,map00260 R07409 RC00087 ko00000,ko00001,ko01000 Bacteria 1MWXW@1224,2KUAN@206389,2VH18@28216,COG4638@1,COG4638@2 NA|NA|NA P COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit HGDHCNMN_00136 159087.Daro_0706 4.1e-126 458.8 Rhodocyclales aggA ko:K12543 M00330 ko00000,ko00002,ko02000,ko02044 1.B.17,3.A.1.109.4 Bacteria 1MYX2@1224,2KUPB@206389,2VKDN@28216,COG1538@1,COG1538@2,COG4319@1,COG4319@2 NA|NA|NA MU COG1538 Outer membrane protein HGDHCNMN_00137 358220.C380_01345 1.8e-68 265.8 Comamonadaceae Bacteria 1RDQS@1224,2VR6A@28216,4ADUW@80864,COG3672@1,COG3672@2 NA|NA|NA S Bacterial transglutaminase-like cysteine proteinase BTLCP HGDHCNMN_00138 358220.C380_01340 5.4e-153 548.1 Comamonadaceae Bacteria 1QV5H@1224,2WGPI@28216,4AD4A@80864,COG5001@1,COG5001@2 NA|NA|NA T LapD/MoxY periplasmic domain HGDHCNMN_00139 557598.LHK_02918 1.4e-49 204.1 Betaproteobacteria ko:K20276 ko02024,map02024 ko00000,ko00001 Bacteria 1MU7T@1224,2VKA9@28216,COG2304@1,COG2304@2,COG2931@1,COG2931@2 NA|NA|NA Q TIGRFAM outer membrane adhesin like proteiin HGDHCNMN_00140 1123367.C666_04675 9.5e-29 132.1 Rhodocyclales dcd GO:0003674,GO:0003824,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.5.4.13 ko:K01494 ko00240,ko01100,map00240,map01100 M00053 R00568,R02325 RC00074 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV2J@1224,2KU9E@206389,2VIJ0@28216,COG0717@1,COG0717@2 NA|NA|NA F Belongs to the dCTP deaminase family HGDHCNMN_00141 640081.Dsui_1245 0.0 1445.6 Rhodocyclales adiA 4.1.1.19 ko:K01584,ko:K01585 ko00330,ko01100,map00330,map01100 M00133 R00566 RC00299 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWK4@1224,2KV3G@206389,2VIJQ@28216,COG1982@1,COG1982@2 NA|NA|NA E COG1982 Arginine lysine ornithine decarboxylases HGDHCNMN_00142 1121035.AUCH01000005_gene142 7.6e-51 206.8 Rhodocyclales folA GO:0000166,GO:0003674,GO:0003824,GO:0004146,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0070401,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.3 ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 M00126,M00840 R00936,R00937,R00939,R00940,R02235,R02236,R11765 RC00109,RC00110,RC00158 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv2763c Bacteria 1RH0P@1224,2KWQ1@206389,2VSH8@28216,COG0262@1,COG0262@2 NA|NA|NA H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis HGDHCNMN_00143 748247.AZKH_1296 1.6e-135 488.8 Rhodocyclales thyA 2.1.1.45 ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 M00053 R02101 RC00219,RC00332 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUBD@1224,2KU8Q@206389,2VIIR@28216,COG0207@1,COG0207@2 NA|NA|NA F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis HGDHCNMN_00144 1000565.METUNv1_02958 2.6e-43 183.3 Rhodocyclales Bacteria 1R4DM@1224,2DBUQ@1,2KVUH@206389,2VP87@28216,2ZB76@2 NA|NA|NA HGDHCNMN_00145 582744.Msip34_1914 4e-229 800.8 Nitrosomonadales leuA 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1MUNQ@1224,2KMBE@206350,2VJG4@28216,COG0119@1,COG0119@2 NA|NA|NA E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) HGDHCNMN_00146 159087.Daro_2851 1.3e-211 742.3 Rhodocyclales metY 2.5.1.49 ko:K01740 ko00270,ko01100,map00270,map01100 R01287,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 iJN746.PP_2528 Bacteria 1NQME@1224,2KUBN@206389,2VHYA@28216,COG2873@1,COG2873@2 NA|NA|NA E O-acetylhomoserine HGDHCNMN_00148 1301098.PKB_1162 5.8e-54 217.2 Gammaproteobacteria ymdB Bacteria 1RCWP@1224,1S3WJ@1236,COG2110@1,COG2110@2 NA|NA|NA S Deacetylates O-acetyl-ADP ribose. Down-regulates ribonuclease 3 (RNase III) activity. Acts by interacting directly with the region of the ribonuclease that is required for dimerization activation HGDHCNMN_00149 85643.Tmz1t_0183 4.4e-62 244.6 Rhodocyclales parA2 ko:K03496 ko00000,ko03036,ko04812 Bacteria 1Q9XV@1224,2KUYF@206389,2VR8E@28216,COG1192@1,COG1192@2 NA|NA|NA D Cobyrinic acid ac-diamide synthase HGDHCNMN_00150 497321.C664_08208 4.6e-09 68.6 Rhodocyclales Bacteria 1N7HI@1224,2E4XE@1,2KXGK@206389,2VVPN@28216,32ZRB@2 NA|NA|NA HGDHCNMN_00151 76114.ebA6309 1.2e-170 606.7 Rhodocyclales pabB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.85,4.1.3.27,4.1.3.38 ko:K01665,ko:K02619,ko:K03342,ko:K13503,ko:K13950 ko00400,ko00790,ko01100,ko01110,ko01130,ko01230,map00400,map00790,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01716,R05553 RC00010,RC01418,RC01843,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MVBJ@1224,2KVPM@206389,2VHXV@28216,COG0115@1,COG0115@2,COG0147@1,COG0147@2 NA|NA|NA EH COG0147 Anthranilate para-aminobenzoate synthases component I HGDHCNMN_00152 1121035.AUCH01000002_gene1457 5.3e-164 583.9 Rhodocyclales ppk2 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008976,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0044237 2.7.4.1 ko:K22468 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 1MVE2@1224,2KUW9@206389,2VGZV@28216,COG2326@1,COG2326@2 NA|NA|NA S Polyphosphate kinase 2 (PPK2) HGDHCNMN_00153 1123354.AUDR01000013_gene704 3.2e-111 408.3 Betaproteobacteria Bacteria 1MWKA@1224,2C7Q9@1,2VN2M@28216,2Z96K@2 NA|NA|NA HGDHCNMN_00154 1454004.AW11_02734 1.7e-142 512.7 unclassified Betaproteobacteria moeA1 2.10.1.1 ko:K03750 ko00790,ko01100,map00790,map01100 R09735 RC03462 ko00000,ko00001,ko01000 Bacteria 1KQH6@119066,1MVD5@1224,2VH78@28216,COG0303@1,COG0303@2 NA|NA|NA H MoeA N-terminal region (domain I and II) HGDHCNMN_00155 1000565.METUNv1_04050 4.6e-54 218.0 Rhodocyclales mobA GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061603,GO:0070568,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902757,GO:1902758 2.10.1.1,2.7.7.77 ko:K03750,ko:K03752,ko:K13818 ko00790,ko01100,map00790,map01100 R09735,R11581 RC03462 ko00000,ko00001,ko01000 iAPECO1_1312.APECO1_2604,iEcHS_1320.EcHS_A4080,iEcolC_1368.EcolC_4158,iLF82_1304.LF82_1370,iNRG857_1313.NRG857_19230,iSBO_1134.SBO_3869,iSbBS512_1146.SbBS512_E4329,iUMNK88_1353.UMNK88_4686,ic_1306.c4801 Bacteria 1RH3M@1224,2KW8P@206389,2VQR2@28216,COG0746@1,COG0746@2 NA|NA|NA H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor HGDHCNMN_00156 1172188.KB911825_gene3574 2.2e-45 189.9 Intrasporangiaceae 2.7.10.2 ko:K08253,ko:K16692 ko00000,ko01000,ko01001 Bacteria 2GJ1Y@201174,4FFZV@85021,COG0489@1,COG0489@2,COG3944@1,COG3944@2 NA|NA|NA DM biosynthesis protein HGDHCNMN_00159 497321.C664_11340 9.2e-168 596.3 Rhodocyclales recA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071496 ko:K03553 ko03440,map03440 M00729 ko00000,ko00001,ko00002,ko03400 Bacteria 1MU3C@1224,2KUUY@206389,2VHNA@28216,COG0468@1,COG0468@2 NA|NA|NA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage HGDHCNMN_00160 748247.AZKH_4321 1.1e-49 203.0 Rhodocyclales ygaD GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016811,GO:0019159 3.5.1.42 ko:K03742,ko:K03743 ko00760,map00760 R02322 RC00100 ko00000,ko00001,ko01000 Bacteria 1RH2Y@1224,2KWIK@206389,2VSQF@28216,COG1546@1,COG1546@2 NA|NA|NA S Belongs to the CinA family HGDHCNMN_00161 62928.azo0509 5.9e-61 240.4 Rhodocyclales pgpA GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008962,GO:0009058,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0030258,GO:0031224,GO:0031226,GO:0032026,GO:0042221,GO:0042577,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0046839,GO:0050896,GO:0071704,GO:0071944,GO:0090407,GO:1901576 3.1.3.27 ko:K01095 ko00564,ko01100,map00564,map01100 R02029 RC00017 ko00000,ko00001,ko01000 iECSP_1301.ECSP_0485,iECUMN_1333.ECUMN_0456,iECs_1301.ECs0471,iG2583_1286.G2583_0529,iPC815.YPO3179,iZ_1308.Z0520 Bacteria 1MZJA@1224,2KW78@206389,2VSP2@28216,COG1267@1,COG1267@2 NA|NA|NA I Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) HGDHCNMN_00162 85643.Tmz1t_0714 2.8e-118 431.8 Rhodocyclales thiL GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009030,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.16 ko:K00946 ko00730,ko01100,map00730,map01100 M00127 R00617 RC00002 ko00000,ko00001,ko00002,ko01000 iSFV_1184.SFV_0382,iYO844.BSU05900 Bacteria 1MU9X@1224,2KV5I@206389,2VI0Q@28216,COG0611@1,COG0611@2 NA|NA|NA H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 HGDHCNMN_00163 76114.ebA3564 2e-45 188.7 Rhodocyclales nusB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 ko:K03625 ko00000,ko03009,ko03021 Bacteria 1RHFZ@1224,2KWPK@206389,2VSI6@28216,COG0781@1,COG0781@2 NA|NA|NA K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons HGDHCNMN_00164 76114.ebA3566 3.1e-62 244.6 Rhodocyclales ribH GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R04457 RC00960 ko00000,ko00001,ko00002,ko01000 iLJ478.TM1825 Bacteria 1RD9J@1224,2KW8Z@206389,2VQGE@28216,COG0054@1,COG0054@2 NA|NA|NA H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin HGDHCNMN_00165 1123487.KB892857_gene2385 1.4e-153 549.3 Rhodocyclales ribB 3.5.4.25,4.1.99.12 ko:K02858,ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 M00125,M00840 R00425,R07281 RC00293,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU8P@1224,2KUGQ@206389,2VH6S@28216,COG0108@1,COG0108@2,COG0807@1,COG0807@2 NA|NA|NA H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate HGDHCNMN_00166 1348657.M622_10930 2.1e-79 302.0 Rhodocyclales ribE GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9,3.5.4.25,4.1.99.12 ko:K00793,ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 M00125,M00840 R00066,R00425,R07281 RC00293,RC00958,RC00960,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS08950 Bacteria 1MUMB@1224,2KW7R@206389,2VIU0@28216,COG0307@1,COG0307@2 NA|NA|NA H riboflavin synthase, alpha HGDHCNMN_00167 748247.AZKH_2060 7.3e-34 150.2 Rhodocyclales Bacteria 1N7MU@1224,2KZVZ@206389,2VVGU@28216,COG2905@1,COG2905@2 NA|NA|NA T Domain in cystathionine beta-synthase and other proteins. HGDHCNMN_00169 572477.Alvin_1373 1.4e-279 969.9 Chromatiales potC 2.1.1.172,2.1.1.80,2.7.13.3,3.1.1.61,3.5.1.44 ko:K00564,ko:K00575,ko:K02026,ko:K02057,ko:K03201,ko:K03406,ko:K03407,ko:K03412,ko:K03413,ko:K07216,ko:K10716,ko:K11070,ko:K13924,ko:K14393 ko02010,ko02020,ko02030,ko03070,map02010,map02020,map02030,map03070 M00207,M00221,M00299,M00333,M00506 R07234 RC00003 ko00000,ko00001,ko00002,ko01000,ko01001,ko02000,ko02022,ko02035,ko02044,ko03009 1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6,2.A.21.7,3.A.1.1,3.A.1.11.1,3.A.1.2,3.A.7 Bacteria 1NRP8@1224,1SKTW@1236,1WXY9@135613,COG0642@1,COG0784@1,COG0784@2,COG1340@1,COG1340@2,COG1352@1,COG1352@2,COG2198@1,COG2198@2,COG2201@1,COG2201@2,COG2202@1,COG2202@2,COG2205@2,COG3290@1,COG3290@2 NA|NA|NA T catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR HGDHCNMN_00170 251221.35212828 1e-126 459.9 Cyanobacteria Bacteria 1FZW8@1117,COG0604@1,COG0604@2 NA|NA|NA C PFAM Alcohol dehydrogenase GroES-like domain HGDHCNMN_00171 1218075.BAYA01000015_gene4163 4e-118 431.4 Burkholderiaceae nemA ko:K10680 ko00633,ko01120,map00633,map01120 R08014,R08017,R08042 RC00250 ko00000,ko00001,ko01000 Bacteria 1K0MK@119060,1MVIX@1224,2VH2S@28216,COG1902@1,COG1902@2 NA|NA|NA C Nadh flavin oxidoreductase nadh oxidase HGDHCNMN_00172 640081.Dsui_3087 9.7e-23 112.5 Rhodocyclales ppiA 5.2.1.8 ko:K01802,ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 Bacteria 1R9ZQ@1224,2KW7U@206389,2VQ3Z@28216,COG0652@1,COG0652@2 NA|NA|NA M PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides HGDHCNMN_00173 1123367.C666_02790 2.9e-71 274.6 Rhodocyclales ppiB GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.7.11.1,5.2.1.8 ko:K03767,ko:K03768,ko:K08884 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko01001,ko03110,ko04147 Bacteria 1R9ZQ@1224,2KW4W@206389,2VQ3Z@28216,COG0652@1,COG0652@2 NA|NA|NA O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides HGDHCNMN_00174 85643.Tmz1t_3049 8.4e-75 287.0 Rhodocyclales lpxH GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 ko:K03269 ko00540,ko01100,map00540,map01100 M00060 R04549 RC00002 ko00000,ko00001,ko00002,ko01000,ko01005 iE2348C_1286.E2348C_0457 Bacteria 1N3U7@1224,2KW80@206389,2VQRP@28216,COG2908@1,COG2908@2 NA|NA|NA S Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell HGDHCNMN_00175 497321.C664_10927 3.4e-174 617.8 Rhodocyclales metZ GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.8 ko:K01739,ko:K01760,ko:K10764 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00782,R00999,R01286,R01288,R02408,R02508,R03217,R03260,R04941,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00382,RC00420,RC00488,RC00710,RC01245,RC02303,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0391 Bacteria 1MU57@1224,2KUT8@206389,2WGGJ@28216,COG0626@1,COG0626@2 NA|NA|NA E Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide HGDHCNMN_00176 497321.C664_10922 2.6e-243 847.8 Rhodocyclales purF GO:0003674,GO:0003824,GO:0004044,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019752,GO:0034641,GO:0034654,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 iAF1260.b2312,iB21_1397.B21_02197,iBWG_1329.BWG_2086,iECBD_1354.ECBD_1347,iECB_1328.ECB_02237,iECDH10B_1368.ECDH10B_2474,iECDH1ME8569_1439.ECDH1ME8569_2250,iECD_1391.ECD_02237,iECIAI1_1343.ECIAI1_2389,iECO103_1326.ECO103_2776,iECO111_1330.ECO111_3060,iECO26_1355.ECO26_3300,iECW_1372.ECW_m2501,iEKO11_1354.EKO11_1453,iETEC_1333.ETEC_2448,iEcDH1_1363.EcDH1_1344,iEcE24377_1341.EcE24377A_2606,iEcolC_1368.EcolC_1340,iJO1366.b2312,iJR904.b2312,iSF_1195.SF2388,iSFxv_1172.SFxv_2633,iSSON_1240.SSON_2370,iS_1188.S2523,iSbBS512_1146.SbBS512_E2690,iUMNK88_1353.UMNK88_2863,iWFL_1372.ECW_m2501,iY75_1357.Y75_RS12125 Bacteria 1MU0V@1224,2KUPY@206389,2VJM1@28216,COG0034@1,COG0034@2 NA|NA|NA F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine HGDHCNMN_00177 748247.AZKH_3103 2.2e-34 152.1 Rhodocyclales cvpA GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 ko:K03558 ko00000 Bacteria 1NF4G@1224,2KWGU@206389,2VUM6@28216,COG1286@1,COG1286@2 NA|NA|NA S colicin v production HGDHCNMN_00178 76114.ebA4781 6.4e-20 104.8 Rhodocyclales agmI ko:K03591,ko:K03749 ko00000,ko03036 Bacteria 1QVC5@1224,2KZVW@206389,2WGPN@28216,COG3087@1,COG3087@2 NA|NA|NA D Sporulation related domain HGDHCNMN_00179 62928.azo1050 2.4e-170 605.1 Rhodocyclales folC GO:0003674,GO:0003824,GO:0004326,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006761,GO:0006807,GO:0008150,GO:0008152,GO:0008841,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046452,GO:0046483,GO:0046900,GO:0046901,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2475,iJN746.PP_1997,iSDY_1059.SDY_2514 Bacteria 1MVCH@1224,2KV9G@206389,2VI0H@28216,COG0285@1,COG0285@2 NA|NA|NA H Belongs to the folylpolyglutamate synthase family HGDHCNMN_00180 62928.azo1049 9.6e-134 483.0 Rhodocyclales accD GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 iJN678.accD,iPC815.YPO2768,iUTI89_1310.UTI89_C2601 Bacteria 1MW8G@1224,2KUCF@206389,2VHEQ@28216,COG0777@1,COG0777@2 NA|NA|NA I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA HGDHCNMN_00181 1123367.C666_02830 9e-110 403.3 Rhodocyclales trpA 4.2.1.20 ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 Bacteria 1MXJV@1224,2KV5S@206389,2VI78@28216,COG0159@1,COG0159@2 NA|NA|NA E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate HGDHCNMN_00182 305700.B447_01196 7.6e-214 749.6 Rhodocyclales trpB GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUS8@1224,2KUYW@206389,2VHV3@28216,COG0133@1,COG0133@2 NA|NA|NA E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine HGDHCNMN_00183 62928.azo1046 3e-81 308.1 Rhodocyclales trpF GO:0000162,GO:0003674,GO:0003824,GO:0004425,GO:0004640,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48,4.2.1.160,4.2.1.20,5.3.1.24 ko:K01696,ko:K01817,ko:K13498,ko:K22100 ko00260,ko00400,ko00790,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map00790,map01100,map01110,map01130,map01230 M00023,M00840 R00674,R02340,R02722,R03508,R03509,R11072 RC00209,RC00210,RC00700,RC00701,RC00944,RC00945,RC02868,RC03343 ko00000,ko00001,ko00002,ko01000 iJN678.trpF,iPC815.YPO2205,iSBO_1134.SBO_1804,iSDY_1059.SDY_1330 Bacteria 1RA87@1224,2KU7Q@206389,2VPZV@28216,COG0135@1,COG0135@2 NA|NA|NA E Belongs to the TrpF family HGDHCNMN_00184 497321.C664_10882 1e-105 389.8 Rhodocyclales truA GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0030312,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 5.4.99.12 ko:K06173 ko00000,ko01000,ko03016 Bacteria 1MUYI@1224,2KU8S@206389,2VI0R@28216,COG0101@1,COG0101@2 NA|NA|NA J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs HGDHCNMN_00185 76114.ebA4769 2e-15 89.0 Rhodocyclales GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 ko:K16783,ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 M00581,M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1N7EI@1224,2KX6B@206389,2VWJT@28216,COG0619@1,COG0619@2 NA|NA|NA P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates HGDHCNMN_00186 85643.Tmz1t_3066 1.8e-45 190.3 Rhodocyclales fimV ko:K07288,ko:K08086 ko00000 Bacteria 1MXV7@1224,2KUPN@206389,2VHX1@28216,COG3170@1,COG3170@2 NA|NA|NA NU COG3170 Tfp pilus assembly protein FimV HGDHCNMN_00187 1123257.AUFV01000001_gene1967 1.8e-36 159.8 Xanthomonadales pilW ko:K02672 ko00000,ko02035,ko02044 Bacteria 1R5YK@1224,1S3DY@1236,1X6P5@135614,COG4966@1,COG4966@2 NA|NA|NA NU Prokaryotic N-terminal methylation motif HGDHCNMN_00188 1385515.N791_08700 9.5e-25 120.2 Xanthomonadales pilX ko:K02673 ko00000,ko02035,ko02044 Bacteria 1N7KP@1224,1SCM5@1236,1X7RR@135614,COG4726@1,COG4726@2 NA|NA|NA NU Pilus assembly protein HGDHCNMN_00189 1000565.METUNv1_01202 5.2e-260 904.4 Rhodocyclales pilY1 ko:K02674 ko00000,ko02035,ko02044 Bacteria 1NUAV@1224,2KUTC@206389,2VHY8@28216,COG3419@1,COG3419@2 NA|NA|NA NU Tfp pilus assembly protein, tip-associated adhesin PilY1 HGDHCNMN_00190 1122185.N792_13015 2.3e-27 128.6 Xanthomonadales pilE ko:K02655 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1N6QE@1224,1SCBS@1236,1X7XB@135614,COG4968@1,COG4968@2 NA|NA|NA NU Type IV minor pilin ComP, DNA uptake sequence receptor HGDHCNMN_00191 1123367.C666_09475 1.4e-52 212.2 Rhodocyclales Bacteria 1RH98@1224,2AHT8@1,2KWFX@206389,2VR76@28216,3185S@2 NA|NA|NA HGDHCNMN_00192 62928.azo1529 1.8e-200 705.7 Rhodocyclales kch Bacteria 1MU1R@1224,2KV5V@206389,2VJ4Z@28216,COG1226@1,COG1226@2 NA|NA|NA P Kef-type K transport HGDHCNMN_00193 305700.B447_03433 1.4e-14 85.9 Rhodocyclales fjo27 Bacteria 1NGE7@1224,2KZNT@206389,2VYXF@28216,COG5652@1,COG5652@2 NA|NA|NA S PFAM VanZ HGDHCNMN_00194 265072.Mfla_1136 1.6e-74 285.8 Nitrosomonadales ydgI ko:K15976 ko00000,ko01000 Bacteria 1RBZQ@1224,2KP6W@206350,2VQTZ@28216,COG0778@1,COG0778@2 NA|NA|NA C Nitroreductase family HGDHCNMN_00195 1163617.SCD_n00525 5.6e-48 197.6 Betaproteobacteria Bacteria 1RA4T@1224,2VMVW@28216,COG1309@1,COG1309@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_00196 62928.azo0902 2e-41 174.9 Rhodocyclales Z012_04380 Bacteria 1N8RK@1224,2KWNK@206389,2VUJW@28216,COG4390@1,COG4390@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_00197 748247.AZKH_3701 1.5e-213 748.8 Rhodocyclales purB GO:0003674,GO:0003824,GO:0004018,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 iAF1260.b1131,iBWG_1329.BWG_0979,iE2348C_1286.E2348C_1272,iEC042_1314.EC042_1202,iECABU_c1320.ECABU_c13450,iECDH10B_1368.ECDH10B_1203,iECP_1309.ECP_1126,iECUMN_1333.ECUMN_1375,iETEC_1333.ETEC_1255,iEcHS_1320.EcHS_A1251,iEcolC_1368.EcolC_2472,iJO1366.b1131,iJR904.b1131,iLF82_1304.LF82_1774,iNRG857_1313.NRG857_05460,iY75_1357.Y75_RS05905,ic_1306.c1510 Bacteria 1MV4B@1224,2KUAY@206389,2VI2T@28216,COG0015@1,COG0015@2 NA|NA|NA F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily HGDHCNMN_00198 1454004.AW11_00841 4.6e-68 264.2 unclassified Betaproteobacteria yqhA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03535 ko00000,ko02000 2.A.1.14.1 Bacteria 1KQQH@119066,1RANN@1224,2VK3P@28216,COG2862@1,COG2862@2 NA|NA|NA S Uncharacterized protein family, UPF0114 HGDHCNMN_00199 159087.Daro_1627 2.3e-279 967.6 Rhodocyclales fumA 4.2.1.2 ko:K01676,ko:K01677,ko:K01678 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUV9@1224,2KUJQ@206389,2VIP7@28216,COG1838@1,COG1838@2,COG1951@1,COG1951@2 NA|NA|NA C Catalyzes the reversible hydration of fumarate to (S)- malate HGDHCNMN_00200 1163617.SCD_n00906 6.8e-164 584.7 Betaproteobacteria MA20_23465 Bacteria 1MU2C@1224,2W14J@28216,COG5001@1,COG5001@2,COG5002@1,COG5002@2 NA|NA|NA T Putative diguanylate phosphodiesterase HGDHCNMN_00201 765914.ThisiDRAFT_0170 1.5e-23 115.5 Gammaproteobacteria ko:K04752 ko00000 Bacteria 1MZ43@1224,1S9ZT@1236,COG0347@1,COG0347@2 NA|NA|NA E nitrogen regulatory protein PII HGDHCNMN_00202 1304883.KI912532_gene2739 4.5e-121 441.0 Rhodocyclales ko:K07086 ko00000 Bacteria 1N85P@1224,2KVD4@206389,2VI5D@28216,COG3329@1,COG3329@2 NA|NA|NA S Na+-dependent bicarbonate transporter superfamily HGDHCNMN_00203 1304883.KI912532_gene2740 3.4e-110 404.8 Rhodocyclales cmpR ko:K21703 ko00000,ko03000 Bacteria 1MWVU@1224,2KUXU@206389,2VJJH@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_00204 748247.AZKH_3313 2.4e-80 305.4 Rhodocyclales Bacteria 1RBEH@1224,28RZD@1,2KVMI@206389,2VQVV@28216,2ZEBA@2 NA|NA|NA HGDHCNMN_00205 159087.Daro_0455 2e-160 572.4 Rhodocyclales Bacteria 1NU8B@1224,2KXZ0@206389,2VHQ9@28216,COG3829@1,COG3829@2 NA|NA|NA K Sigma-54 interaction domain HGDHCNMN_00206 748247.AZKH_2019 2.1e-207 728.4 Rhodocyclales yxjC Bacteria 1N2VU@1224,2KYC4@206389,2VHB5@28216,COG2610@1,COG2610@2 NA|NA|NA EG Citrate transporter HGDHCNMN_00207 1304883.KI912532_gene392 7.8e-288 996.1 Rhodocyclales 2.8.3.1 ko:K01026 ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120 R00928,R01449,R05508 RC00012,RC00014,RC00137 ko00000,ko00001,ko01000 Bacteria 1MUJW@1224,2KVP5@206389,2VH8B@28216,COG4670@1,COG4670@2 NA|NA|NA I CoA transferase having broad substrate specificity for short-chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons HGDHCNMN_00208 748247.AZKH_3937 1.3e-13 82.4 Rhodocyclales Bacteria 1NIQ0@1224,2EMU8@1,2KZ4Z@206389,2VXM8@28216,33FGK@2 NA|NA|NA HGDHCNMN_00209 748247.AZKH_1317 9.3e-19 100.1 Rhodocyclales Bacteria 1N7KX@1224,2E7ZM@1,2KXDK@206389,2VWWD@28216,332E0@2 NA|NA|NA HGDHCNMN_00210 497321.C664_16700 2.7e-75 289.3 Rhodocyclales flgL GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 ko:K02397 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1PJUJ@1224,2KW67@206389,2VM4I@28216,COG1344@1,COG1344@2 NA|NA|NA N Belongs to the bacterial flagellin family HGDHCNMN_00211 1123367.C666_05740 3.7e-132 479.2 Rhodocyclales flgK GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0044085,GO:0044780,GO:0044781,GO:0070925,GO:0071840 ko:K02396 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MV2M@1224,2KVUK@206389,2VH02@28216,COG1256@1,COG1256@2 NA|NA|NA N Belongs to the flagella basal body rod proteins family HGDHCNMN_00212 748247.AZKH_1314 1.6e-81 309.7 Rhodocyclales flgJ GO:0001539,GO:0003674,GO:0005198,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 3.5.1.28 ko:K01448,ko:K02395 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko02035,ko03036 Bacteria 1MX2W@1224,2KW3R@206389,2VH35@28216,COG1705@1,COG1705@2,COG3951@1,COG3951@2 NA|NA|NA N Flagellar rod assembly protein muramidase FlgJ HGDHCNMN_00213 85643.Tmz1t_2917 4.6e-65 254.2 Rhodocyclales flgI GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0006950,GO:0006974,GO:0008150,GO:0009288,GO:0009425,GO:0009987,GO:0033554,GO:0040011,GO:0042597,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0071973,GO:0097588 ko:K02394 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MVKW@1224,2KV45@206389,2VJAZ@28216,COG1706@1,COG1706@2 NA|NA|NA N Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation HGDHCNMN_00214 748247.AZKH_0548 8.6e-73 279.6 Rhodocyclales metK GO:0000096,GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004478,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006556,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009069,GO:0009108,GO:0009116,GO:0009119,GO:0009987,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0019752,GO:0030554,GO:0030955,GO:0031420,GO:0032553,GO:0032555,GO:0032559,GO:0033353,GO:0034641,GO:0035639,GO:0036094,GO:0042278,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046872,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901605,GO:1901657 2.5.1.6 ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 M00034,M00035,M00368,M00609 R00177,R04771 RC00021,RC01211 ko00000,ko00001,ko00002,ko01000 iJN746.PP_4967,iYL1228.KPN_03375 Bacteria 1MUFQ@1224,2KV7G@206389,2VH7U@28216,COG0192@1,COG0192@2 NA|NA|NA H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme HGDHCNMN_00215 395495.Lcho_3682 5.8e-93 348.2 Proteobacteria 3.6.1.54 ko:K03269 ko00540,ko01100,map00540,map01100 M00060 R04549 RC00002 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1QZYR@1224,COG2908@1,COG2908@2 NA|NA|NA S Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell HGDHCNMN_00216 395495.Lcho_3681 3.9e-33 150.2 Proteobacteria Bacteria 1N70K@1224,COG4995@1,COG4995@2 NA|NA|NA Q CHAT domain HGDHCNMN_00217 159087.Daro_2878 9.4e-106 390.2 Rhodocyclales mpd Bacteria 1MY6G@1224,2KVSE@206389,2VIK0@28216,COG0491@1,COG0491@2 NA|NA|NA S Beta-lactamase superfamily domain HGDHCNMN_00218 1348657.M622_00300 1.1e-34 152.5 Rhodocyclales ko:K11312 ko00000 Bacteria 1QUHG@1224,2KXA4@206389,2WGPE@28216,COG0662@1,COG0662@2 NA|NA|NA G Cupin domain HGDHCNMN_00219 522306.CAP2UW1_0720 2.8e-78 299.3 unclassified Betaproteobacteria cycH ko:K02200 ko00000 Bacteria 1KQB8@119066,1MY4J@1224,2VQ05@28216,COG4235@1,COG4235@2 NA|NA|NA O Cytochrome c-type biogenesis protein HGDHCNMN_00220 452638.Pnec_1376 9.4e-41 173.3 Burkholderiaceae cycL ko:K02198,ko:K02200 ko00000,ko02000 9.B.14.1 Bacteria 1K950@119060,1MZZ5@1224,2VU7C@28216,COG3088@1,COG3088@2 NA|NA|NA P subunit of a heme lyase HGDHCNMN_00221 1121035.AUCH01000025_gene3335 3e-70 271.6 Rhodocyclales ccmG ko:K02199 ko00000,ko03110 Bacteria 1RI3N@1224,2KW3E@206389,2VR8D@28216,COG0526@1,COG0526@2 NA|NA|NA CO Periplasmic protein thiol disulfide oxidoreductase DsbE HGDHCNMN_00222 640081.Dsui_1172 4.6e-269 933.7 Rhodocyclales ccmF ko:K02198 ko00000,ko02000 9.B.14.1 Bacteria 1MUQS@1224,2KUNW@206389,2VHUE@28216,COG1138@1,COG1138@2 NA|NA|NA O Cytochrome c HGDHCNMN_00223 338969.Rfer_0041 3.8e-54 217.6 Comamonadaceae ccmE GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015886,GO:0016020,GO:0016043,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0019538,GO:0020037,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0051179,GO:0051181,GO:0051234,GO:0065003,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097159,GO:0098552,GO:0098567,GO:1901363,GO:1901564,GO:1901678 ko:K02197 ko00000 iSSON_1240.SSON_2255 Bacteria 1RHN5@1224,2VRKZ@28216,4AESD@80864,COG2332@1,COG2332@2 NA|NA|NA O Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH HGDHCNMN_00224 338969.Rfer_0042 2.2e-08 64.3 Comamonadaceae ccmD GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015886,GO:0016020,GO:0031224,GO:0031226,GO:0031235,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098552,GO:0098562,GO:1901678 ko:K02196 ko02010,map02010 ko00000,ko00001,ko02000 3.A.1.107 iB21_1397.B21_02084,iBWG_1329.BWG_1971,iE2348C_1286.E2348C_2342,iEC042_1314.EC042_2439,iEC55989_1330.EC55989_2451,iECABU_c1320.ECABU_c25320,iECBD_1354.ECBD_1462,iECB_1328.ECB_02125,iECDH10B_1368.ECDH10B_2355,iECDH1ME8569_1439.ECDH1ME8569_2133,iECD_1391.ECD_02125,iECED1_1282.ECED1_2663,iECH74115_1262.ECH74115_3335,iECIAI1_1343.ECIAI1_2280,iECIAI39_1322.ECIAI39_2336,iECNA114_1301.ECNA114_2290,iECO103_1326.ECO103_2673,iECO111_1330.ECO111_2934,iECO26_1355.ECO26_3124,iECOK1_1307.ECOK1_2432,iECP_1309.ECP_2238,iECS88_1305.ECS88_2345,iECSE_1348.ECSE_2466,iECSF_1327.ECSF_2079,iECSP_1301.ECSP_3077,iECUMN_1333.ECUMN_2533,iECs_1301.ECs3087,iEKO11_1354.EKO11_1558,iETEC_1333.ETEC_2332,iEcDH1_1363.EcDH1_1461,iEcE24377_1341.EcE24377A_2497,iEcHS_1320.EcHS_A2336,iEcSMS35_1347.EcSMS35_2346,iEcolC_1368.EcolC_1452,iJO1366.b2198,iLF82_1304.LF82_0276,iNRG857_1313.NRG857_11155,iSDY_1059.SDY_0880,iSFV_1184.SFV_2274,iSF_1195.SF2282,iSSON_1240.SSON_2256,iS_1188.S2412,iUMN146_1321.UM146_05815,iUMNK88_1353.UMNK88_2745,iUTI89_1310.UTI89_C2476,iY75_1357.Y75_RS11500,iZ_1308.Z3455,ic_1306.c2735 Bacteria 1PWM2@1224,2WC5D@28216,4AIVV@80864,COG3114@1,COG3114@2 NA|NA|NA U Heme exporter protein D (CcmD) HGDHCNMN_00225 640081.Dsui_1169 2.1e-113 415.2 Rhodocyclales ccmC GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016021,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0031224,GO:0031226,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044425,GO:0044459,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748 ko:K02195 ko02010,map02010 M00259 ko00000,ko00001,ko00002,ko02000 3.A.1.107 iECDH1ME8569_1439.ECDH1ME8569_2134,iSFV_1184.SFV_2275,iSFxv_1172.SFxv_2517,iUTI89_1310.UTI89_C2477,ic_1306.c2736 Bacteria 1MU61@1224,2KV1K@206389,2VHF8@28216,COG0755@1,COG0755@2 NA|NA|NA U Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes HGDHCNMN_00226 338969.Rfer_0044 3.5e-59 235.0 Comamonadaceae ccmB GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031224,GO:0031226,GO:0032991,GO:0042623,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.41 ko:K02193,ko:K02194 ko02010,map02010 M00259 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.107 iECO111_1330.ECO111_2936,iYL1228.KPN_02080 Bacteria 1NJB0@1224,2VNPU@28216,4ADQT@80864,COG2386@1,COG2386@2 NA|NA|NA U Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes HGDHCNMN_00227 395494.Galf_1773 2.1e-55 222.2 Nitrosomonadales ccmA 3.6.3.41 ko:K02193 ko02010,map02010 M00259 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.107 Bacteria 1MZPC@1224,2VMGA@28216,44V0F@713636,COG4133@1,COG4133@2 NA|NA|NA P once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system HGDHCNMN_00228 497321.C664_16455 1.1e-74 288.1 Rhodocyclales Bacteria 1MU9B@1224,2KUPC@206389,2VGZ8@28216,COG0840@1,COG0840@2 NA|NA|NA T COG2202 FOG PAS PAC domain HGDHCNMN_00229 62928.azo3435 2.3e-85 322.0 Rhodocyclales virC1 ko:K03496 ko00000,ko03036,ko04812 Bacteria 1Q9Z3@1224,2KVXM@206389,2VKUV@28216,COG1192@1,COG1192@2 NA|NA|NA D ATPases involved in chromosome partitioning HGDHCNMN_00230 748247.AZKH_4020 2.3e-81 308.9 Rhodocyclales ko:K15256 ko00000,ko01000,ko03016 Bacteria 1QVCU@1224,2KZWC@206389,2WGQP@28216,COG0500@1,COG0500@2 NA|NA|NA Q methyltransferase HGDHCNMN_00231 748247.AZKH_4019 0.0 1763.8 Rhodocyclales porG 1.2.7.11,1.2.7.3,1.2.7.8 ko:K00175,ko:K04090 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1MUKS@1224,2KUJ8@206389,2VJGC@28216,COG1014@1,COG1014@2,COG4231@1,COG4231@2 NA|NA|NA C COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits HGDHCNMN_00232 357808.RoseRS_2159 2.2e-131 476.1 Chloroflexia Bacteria 2G7Q0@200795,376N0@32061,COG5267@1,COG5267@2 NA|NA|NA S Protein of unknown function (DUF1800) HGDHCNMN_00233 383372.Rcas_3484 1.2e-81 310.5 Chloroflexia Bacteria 2G79B@200795,3759N@32061,COG4102@1,COG4102@2 NA|NA|NA S Protein of unknown function (DUF1501) HGDHCNMN_00234 887062.HGR_04823 7.2e-110 404.8 Proteobacteria Bacteria 1NAE1@1224,28J7E@1,2Z92U@2 NA|NA|NA S Domain of unknown function (DUF4105) HGDHCNMN_00235 1538295.JY96_12850 6.9e-41 173.7 Betaproteobacteria Bacteria 1N17Y@1224,2DMP9@1,2VX5P@28216,32SV1@2 NA|NA|NA S Protein of unknown function (DUF3015) HGDHCNMN_00236 1304883.KI912532_gene3130 6.5e-46 191.8 Proteobacteria Bacteria 1RBQH@1224,COG0840@1,COG0840@2 NA|NA|NA NT chemotaxis protein HGDHCNMN_00237 76114.ebA3803 3.5e-207 727.6 Rhodocyclales dld 1.1.2.4,1.1.3.15 ko:K00102,ko:K00104 ko00620,ko00630,ko01100,ko01110,ko01120,ko01130,map00620,map00630,map01100,map01110,map01120,map01130 R00197,R00475 RC00042,RC00044 ko00000,ko00001,ko01000 Bacteria 1MU6Y@1224,2KVPK@206389,2VI85@28216,COG0277@1,COG0277@2 NA|NA|NA C FAD linked oxidases, C-terminal domain HGDHCNMN_00238 748247.AZKH_4247 1.9e-54 218.4 Rhodocyclales tdcF 3.5.99.10 ko:K09022 R11098,R11099 RC03275,RC03354 ko00000,ko01000 Bacteria 1MZ3J@1224,2KWF2@206389,2VRQ3@28216,COG0251@1,COG0251@2 NA|NA|NA J endoribonuclease L-PSP HGDHCNMN_00239 748247.AZKH_4246 4.6e-275 953.7 Rhodocyclales recG GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MWN2@1224,2KUCJ@206389,2VHE8@28216,COG1200@1,COG1200@2 NA|NA|NA L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) HGDHCNMN_00240 62928.azo0478 1.8e-37 162.5 Rhodocyclales ubiC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008813,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.1.3.40 ko:K03181 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R01302 RC00491,RC02148 ko00000,ko00001,ko00002,ko01000 iZ_1308.Z5638 Bacteria 1N8BF@1224,2KXAX@206389,2VU5V@28216,COG3161@1,COG3161@2 NA|NA|NA H Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway HGDHCNMN_00241 62928.azo0479 1.7e-117 429.1 Rhodocyclales ubiA GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008412,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 2.5.1.39 ko:K03179 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R05000,R05615 RC00209,RC02895 ko00000,ko00001,ko00002,ko01000,ko01006 iZ_1308.Z5639 Bacteria 1MV4Q@1224,2KUZN@206389,2VHEU@28216,COG0382@1,COG0382@2 NA|NA|NA H Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate HGDHCNMN_00242 748247.AZKH_3121 1.2e-191 676.0 Rhodocyclales ilvB GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 iSDY_1059.SDY_4155 Bacteria 1MU6U@1224,2KV5U@206389,2VMKP@28216,COG0028@1,COG0028@2 NA|NA|NA H Acetolactate synthase HGDHCNMN_00243 748247.AZKH_3122 1.6e-252 878.6 Rhodocyclales fadD 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 Bacteria 1MU6G@1224,2KUXQ@206389,2VI0I@28216,COG0318@1,COG0318@2 NA|NA|NA IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II HGDHCNMN_00244 748247.AZKH_3123 1.1e-56 226.1 Rhodocyclales hrp1 Bacteria 1N0H3@1224,2KW7W@206389,2VQEB@28216,COG0517@1,COG0517@2 NA|NA|NA S CBS domain HGDHCNMN_00245 395494.Galf_2445 2.7e-49 201.1 Nitrosomonadales fdxA ko:K05524 ko00000 Bacteria 1RH5I@1224,2VSJ0@28216,44WI9@713636,COG1146@1,COG1146@2 NA|NA|NA C Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions HGDHCNMN_00246 76114.ebB161 2e-52 211.5 Rhodocyclales trxA GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 iECW_1372.ECW_m4079,iECs_1301.ECs4714,iEKO11_1354.EKO11_4576,iG2583_1286.G2583_4574,iSBO_1134.SBO_3791,iSDY_1059.SDY_3968,iSF_1195.SF3854,iSSON_1240.SSON_3952,iS_1188.S3905,iWFL_1372.ECW_m4079,iZ_1308.Z5291 Bacteria 1MZBB@1224,2KWAV@206389,2VSHX@28216,COG3118@1,COG3118@2 NA|NA|NA O Belongs to the thioredoxin family HGDHCNMN_00247 76114.ebA4743 9.4e-223 779.2 Rhodocyclales rho GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 ko:K02887,ko:K03628 ko03010,ko03018,map03010,map03018 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03019,ko03021 Bacteria 1MUCF@1224,2KVBW@206389,2VJ2E@28216,COG1158@1,COG1158@2 NA|NA|NA K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template HGDHCNMN_00248 1123367.C666_05970 9e-26 122.5 Rhodocyclales Bacteria 1N7MN@1224,2EFX9@1,2KXDY@206389,2VW9F@28216,32YGP@2 NA|NA|NA HGDHCNMN_00249 76114.ebA5136 1.7e-33 149.1 Rhodocyclales ccoH ko:K09926 ko00000 Bacteria 1N75J@1224,2KX1A@206389,2VTYE@28216,COG3198@1,COG3198@2 NA|NA|NA S FixH family HGDHCNMN_00250 497321.C664_09813 8.5e-133 479.9 Rhodocyclales ccoP ko:K00406 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002 3.D.4.3 iJN746.PP_4253 Bacteria 1MUCW@1224,2KUZH@206389,2VHGS@28216,COG2010@1,COG2010@2 NA|NA|NA C C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex HGDHCNMN_00251 76114.ebA5132 3.2e-95 354.8 Rhodocyclales ccoO 1.9.3.1 ko:K00405,ko:K15862 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iIT341.HP0145 Bacteria 1MXEY@1224,2KVRX@206389,2VIJ2@28216,COG2993@1,COG2993@2 NA|NA|NA C COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit HGDHCNMN_00252 62928.azo1341 2.4e-259 901.0 Rhodocyclales ccoN GO:0003674,GO:0003824,GO:0004129,GO:0005215,GO:0005488,GO:0005506,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008144,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0015975,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016675,GO:0016676,GO:0016705,GO:0017144,GO:0019411,GO:0019637,GO:0019646,GO:0019693,GO:0019825,GO:0020037,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045154,GO:0045333,GO:0046034,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070069,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901135,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.9.3.1 ko:K00404,ko:K15862 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iIT341.HP0144 Bacteria 1MU18@1224,2KVB2@206389,2VIWB@28216,COG3278@1,COG3278@2 NA|NA|NA C Belongs to the heme-copper respiratory oxidase family HGDHCNMN_00253 1121035.AUCH01000002_gene1606 1.2e-83 316.6 Rhodocyclales Bacteria 1NSUG@1224,2KV4Q@206389,2VNS7@28216,COG4395@1,COG4395@2 NA|NA|NA S import inner membrane translocase subunit Tim44 HGDHCNMN_00254 1121035.AUCH01000012_gene2958 6.6e-117 427.2 Rhodocyclales nhaR ko:K03717 ko00000,ko03000 Bacteria 1MVHT@1224,2KVKU@206389,2VHF0@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HGDHCNMN_00255 1304883.KI912532_gene2435 2.5e-10 71.6 Rhodocyclales hpf GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 ko:K05808 ko00000,ko03009 Bacteria 1N8CQ@1224,2KXJW@206389,2VVX7@28216,COG1544@1,COG1544@2 NA|NA|NA J Sigma 54 modulation protein / S30EA ribosomal protein HGDHCNMN_00257 748247.AZKH_0033 1.2e-105 389.8 Rhodocyclales rdgC ko:K03554 ko00000,ko03400 Bacteria 1MXPR@1224,2KVYJ@206389,2VHD8@28216,COG2974@1,COG2974@2 NA|NA|NA L May be involved in recombination HGDHCNMN_00259 62928.azo3321 2.2e-176 625.9 Rhodocyclales tamB ko:K09800 ko00000,ko02000 Bacteria 1MUVD@1224,2KUFW@206389,2VJB8@28216,COG2911@1,COG2911@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_00260 384676.PSEEN2653 3.3e-15 89.0 Gammaproteobacteria Bacteria 1R499@1224,1RZKQ@1236,28KNE@1,2ZA6M@2 NA|NA|NA S Protein of unknown function (DUF998) HGDHCNMN_00261 1304883.KI912532_gene2695 1e-73 283.5 Betaproteobacteria ko:K19707 ko00000,ko03021 Bacteria 1N8CR@1224,2WHJM@28216,COG0596@1,COG0596@2 NA|NA|NA S Serine aminopeptidase, S33 HGDHCNMN_00262 1123367.C666_15140 2.2e-51 209.1 Rhodocyclales Bacteria 1PRHB@1224,2KWUJ@206389,2VTBQ@28216,COG5473@1,COG5473@2 NA|NA|NA S Predicted integral membrane protein (DUF2189) HGDHCNMN_00263 882378.RBRH_01085 2.9e-64 251.5 Burkholderiaceae msrA 1.8.4.11 ko:K07304 ko00000,ko01000 Bacteria 1K3ZU@119060,1MVUS@1224,2VR6F@28216,COG0225@1,COG0225@2 NA|NA|NA O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine HGDHCNMN_00264 1123487.KB892835_gene3789 6e-47 193.4 Rhodocyclales fkpA 5.2.1.8 ko:K01802,ko:K03772 ko00000,ko01000,ko03110 Bacteria 1RDA1@1224,2KWM2@206389,2VSIG@28216,COG0545@1,COG0545@2 NA|NA|NA O Peptidyl-prolyl cis-trans HGDHCNMN_00266 247639.MGP2080_07012 7e-119 434.5 Gammaproteobacteria CP_0318 ko:K06132 ko00564,ko01100,map00564,map01100 R11062 RC00017 ko00000,ko00001,ko01000 Bacteria 1MUDJ@1224,1RMIF@1236,COG1502@1,COG1502@2 NA|NA|NA I COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes HGDHCNMN_00267 1366050.N234_26750 5.7e-178 630.9 Burkholderiaceae Bacteria 1K0BQ@119060,1MUY7@1224,2VIXT@28216,COG0642@1,COG0745@1,COG0745@2,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_00268 1366050.N234_26755 2.6e-56 225.3 Burkholderiaceae corR Bacteria 1KC4U@119060,1P4TD@1224,2W90G@28216,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon HGDHCNMN_00271 84531.JMTZ01000006_gene3476 4.5e-67 262.7 Proteobacteria Bacteria 1P9HF@1224,2DGBE@1,2ZV9X@2 NA|NA|NA HGDHCNMN_00273 76114.ebA4224 3.9e-211 741.1 Rhodocyclales recQ GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008270,GO:0009295,GO:0009378,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017116,GO:0017117,GO:0030894,GO:0032392,GO:0032508,GO:0032991,GO:0032993,GO:0033202,GO:0033554,GO:0034641,GO:0042623,GO:0043138,GO:0043140,GO:0043142,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494,GO:1904949 3.6.4.12 ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 Bacteria 1MVGG@1224,2KUTU@206389,2VH8W@28216,COG0514@1,COG0514@2 NA|NA|NA L DNA helicase HGDHCNMN_00274 497321.C664_17000 1.4e-131 475.7 Rhodocyclales mraY GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 iAF987.Gmet_0409,iEC042_1314.EC042_0088,iECABU_c1320.ECABU_c00920,iECED1_1282.ECED1_0088,iECH74115_1262.ECH74115_0095,iECSP_1301.ECSP_0090,iECs_1301.ECs0091,iG2583_1286.G2583_0091,iSDY_1059.SDY_0117,iZ_1308.Z0097,ic_1306.c0105 Bacteria 1MUTK@1224,2KVME@206389,2VHAP@28216,COG0472@1,COG0472@2 NA|NA|NA M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan HGDHCNMN_00275 62928.azo0882 3.7e-164 584.7 Rhodocyclales murD GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008764,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 iAPECO1_1312.APECO1_1898,iECNA114_1301.ECNA114_0081,iECOK1_1307.ECOK1_0089,iECP_1309.ECP_0090,iECS88_1305.ECS88_0091,iECSF_1327.ECSF_0098,iLF82_1304.LF82_1418,iNRG857_1313.NRG857_00450,iUMN146_1321.UM146_23225,iUTI89_1310.UTI89_C0097 Bacteria 1MVYD@1224,2KU87@206389,2VHJ1@28216,COG0771@1,COG0771@2 NA|NA|NA M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) HGDHCNMN_00276 76114.ebA1445 1.3e-168 599.4 Rhodocyclales ftsW GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008360,GO:0009987,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032153,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051179,GO:0051234,GO:0051301,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071705,GO:0071944,GO:1901264,GO:1901505 2.4.1.227 ko:K02563,ko:K03588 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011,ko02000,ko03036 2.A.103.1 GT28 Bacteria 1MVDB@1224,2KUH4@206389,2VI5Q@28216,COG0772@1,COG0772@2 NA|NA|NA D Peptidoglycan polymerase that is essential for cell division HGDHCNMN_00277 305700.B447_02913 2.3e-145 521.9 Rhodocyclales murG GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0050511,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.227 ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011 GT28 iLJ478.TM0232,iSFV_1184.SFV_0083,iSF_1195.SF0087,iSFxv_1172.SFxv_0091,iS_1188.S0089 Bacteria 1MVIB@1224,2KVGS@206389,2VH32@28216,COG0707@1,COG0707@2 NA|NA|NA M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) HGDHCNMN_00279 1304883.KI912532_gene2490 1.8e-97 362.1 Rhodocyclales udgB GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MW91@1224,2KY7S@206389,2VQ3T@28216,COG1573@1,COG1573@2 NA|NA|NA L UreE urease accessory protein, C-terminal domain HGDHCNMN_00280 1304883.KI912532_gene2491 3.6e-284 983.8 Rhodocyclales uvrC GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009380,GO:0009381,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016787,GO:0016788,GO:0030312,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1902494,GO:1905347,GO:1905348,GO:1990391 ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1MV38@1224,2KURJ@206389,2VIM4@28216,COG0322@1,COG0322@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision HGDHCNMN_00281 1304883.KI912532_gene2492 6.7e-83 313.5 Rhodocyclales pgsA 2.7.8.41,2.7.8.5 ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 R01801,R02030 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 Bacteria 1RCZ7@1224,2KW4F@206389,2VQI2@28216,COG0558@1,COG0558@2 NA|NA|NA I Belongs to the CDP-alcohol phosphatidyltransferase class-I family HGDHCNMN_00286 1218084.BBJK01000066_gene4947 6.7e-202 709.9 Burkholderiaceae gcdH 1.3.8.6 ko:K00252 ko00071,ko00310,ko00362,ko00380,ko01100,ko01120,ko01130,map00071,map00310,map00362,map00380,map01100,map01120,map01130 M00032 R02487,R02488,R10074 RC00052,RC00156 ko00000,ko00001,ko00002,ko01000 Bacteria 1K6D6@119060,1MUK0@1224,2VHDV@28216,COG1960@1,COG1960@2 NA|NA|NA I Acyl-CoA dehydrogenase, middle domain HGDHCNMN_00287 1304883.KI912532_gene251 9.9e-175 619.8 Rhodocyclales livF ko:K01996 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MVVC@1224,2KZYP@206389,2VK1I@28216,COG0410@1,COG0410@2,COG3945@1,COG3945@2 NA|NA|NA E Hemerythrin HHE cation binding domain HGDHCNMN_00288 159087.Daro_0365 9e-120 436.4 Rhodocyclales livG ko:K01995 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MUTY@1224,2KZYQ@206389,2VHQC@28216,COG0411@1,COG0411@2 NA|NA|NA E Branched-chain amino acid ATP-binding cassette transporter HGDHCNMN_00289 1304883.KI912532_gene249 1.1e-151 542.7 Rhodocyclales livM ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MV66@1224,2KZ2Q@206389,2VM4B@28216,COG4177@1,COG4177@2 NA|NA|NA P Belongs to the binding-protein-dependent transport system permease family HGDHCNMN_00290 159087.Daro_0367 1.8e-132 478.8 Rhodocyclales livH ko:K01997 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MU25@1224,2KZZV@206389,2VIDW@28216,COG0559@1,COG0559@2 NA|NA|NA E Branched-chain amino acid transport system / permease component HGDHCNMN_00291 85643.Tmz1t_1516 7.5e-101 373.6 Rhodocyclales Bacteria 1Q7BI@1224,2KYEM@206389,2VKBU@28216,COG1414@1,COG1414@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_00292 1348657.M622_10860 2.1e-74 285.4 Rhodocyclales caiE GO:0003674,GO:0003824,GO:0006575,GO:0006577,GO:0006807,GO:0008150,GO:0008152,GO:0008735,GO:0009437,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0034641,GO:0044237,GO:0071704,GO:0097164,GO:1901564 ko:K02617,ko:K08279 ko00000 Bacteria 1MVUI@1224,2KUST@206389,2VH4Y@28216,COG0663@1,COG0663@2 NA|NA|NA S Phenylacetic acid degradation protein PaaY HGDHCNMN_00293 1003200.AXXA_01420 6.8e-46 190.3 Betaproteobacteria VY92_01935 Bacteria 1RKY5@1224,2VSJG@28216,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain HGDHCNMN_00294 1157708.KB907450_gene6085 6.7e-35 153.3 Comamonadaceae 2.3.1.128 ko:K03790 ko00000,ko01000,ko03009 Bacteria 1N1IA@1224,2VSTH@28216,4AF7G@80864,COG2329@1,COG2329@2 NA|NA|NA S Antibiotic biosynthesis monooxygenase HGDHCNMN_00295 85643.Tmz1t_1514 2.6e-127 461.8 Rhodocyclales paaX ko:K02616 ko00000,ko03000 Bacteria 1R4IF@1224,2KVFG@206389,2VP5N@28216,COG3327@1,COG3327@2 NA|NA|NA K PaaX family HGDHCNMN_00296 1304883.KI912532_gene247 8.4e-177 626.3 Betaproteobacteria 1.17.1.1,1.18.1.3 ko:K00523,ko:K00529 ko00071,ko00360,ko00520,ko01120,ko01220,map00071,map00360,map00520,map01120,map01220 M00545 R02000,R03391,R03392,R06782,R06783 RC00098,RC00230 br01602,ko00000,ko00001,ko00002,ko01000 Bacteria 1REP4@1224,2VM5Y@28216,COG1018@1,COG1018@2 NA|NA|NA C Oxidoreductase FAD-binding domain HGDHCNMN_00297 1304883.KI912532_gene246 7.7e-199 699.5 Betaproteobacteria acsF 1.14.13.81 ko:K04035 ko00860,ko01100,ko01110,map00860,map01100,map01110 R06265,R06266,R06267,R10068 RC00741,RC01491,RC01492,RC03042 ko00000,ko00001,ko01000 Bacteria 1QXP8@1224,2VNUB@28216,COG0208@1,COG0208@2 NA|NA|NA F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides HGDHCNMN_00298 305700.B447_09033 5.7e-284 983.0 Rhodocyclales paaN Bacteria 1MY4N@1224,2KUYJ@206389,2VH9F@28216,COG1012@1,COG1012@2 NA|NA|NA C phenylacetic acid degradation protein paaN HGDHCNMN_00299 85643.Tmz1t_1512 6.5e-129 466.8 Rhodocyclales paaG GO:0003674,GO:0003824,GO:0004300,GO:0005488,GO:0005515,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0019395,GO:0019439,GO:0019748,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 5.3.3.18 ko:K15866 ko00360,ko01120,map00360,map01120 R09837,R09839 RC00004,RC00326,RC02689,RC03003 ko00000,ko00001,ko01000 iECO103_1326.ECO103_1531,iJN746.PP_3283,iYL1228.KPN_01475 Bacteria 1MVQN@1224,2KUU2@206389,2VHE9@28216,COG1024@1,COG1024@2 NA|NA|NA I Belongs to the enoyl-CoA hydratase isomerase family HGDHCNMN_00300 305700.B447_09043 1.7e-221 775.4 Rhodocyclales paaH 1.1.1.157 ko:K00074 ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120 R01976,R05576,R06941 RC00029,RC00117 ko00000,ko00001,ko01000 Bacteria 1MU9P@1224,2KVQR@206389,2VK75@28216,COG1250@1,COG1250@2 NA|NA|NA I 3-hydroxyacyl-CoA dehydrogenase HGDHCNMN_00301 305700.B447_09048 5.9e-61 240.4 Rhodocyclales paaI GO:0003674,GO:0003824,GO:0016289,GO:0016787,GO:0016788,GO:0016790 ko:K02614 ko00360,map00360 R09840 RC00004,RC00014 ko00000,ko00001,ko01000 iBWG_1329.BWG_1225,iEC55989_1330.EC55989_1532,iECDH10B_1368.ECDH10B_1521,iECDH1ME8569_1439.EcDH1_2249,iECIAI1_1343.ECIAI1_1396,iECO103_1326.ECO103_1533,iECO111_1330.ECO111_1790,iECO26_1355.ECO26_2000,iECSE_1348.ECSE_1481,iEKO11_1354.EKO11_2417,iETEC_1333.ETEC_1471,iEcDH1_1363.EcDH1_2249,iEcE24377_1341.EcE24377A_1581,iEcHS_1320.EcHS_A1483,iEcolC_1368.EcolC_2259,iUMNK88_1353.UMNK88_1803,iY75_1357.Y75_RS07340 Bacteria 1RH35@1224,2KWSU@206389,2VRC2@28216,COG2050@1,COG2050@2 NA|NA|NA Q phenylacetic acid degradation protein HGDHCNMN_00302 1304883.KI912532_gene241 2.1e-220 771.5 Rhodocyclales paaK GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006082,GO:0006725,GO:0006805,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0017076,GO:0019439,GO:0019748,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0047475,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0097159,GO:0097367,GO:0098754,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 R02539 RC00004,RC00014 ko00000,ko00001,ko01000 iECIAI1_1343.ECIAI1_1398,iECO111_1330.ECO111_1792,iECO26_1355.ECO26_2002,iECSE_1348.ECSE_1483,iECW_1372.ECW_m1532,iEKO11_1354.EKO11_2415,iEcE24377_1341.EcE24377A_1584,iWFL_1372.ECW_m1532 Bacteria 1MV1W@1224,2KVJW@206389,2VI46@28216,COG1541@1,COG1541@2 NA|NA|NA H Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) HGDHCNMN_00303 85643.Tmz1t_1508 6e-203 713.4 Rhodocyclales pcaF 2.3.1.16,2.3.1.174,2.3.1.223,2.3.1.9 ko:K00626,ko:K00632,ko:K02615 ko00071,ko00072,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00592,ko00620,ko00630,ko00640,ko00642,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00281,map00310,map00360,map00362,map00380,map00592,map00620,map00630,map00640,map00642,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00087,M00088,M00095,M00113,M00373,M00374,M00375 R00238,R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095,R09839 RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955,RC03003 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MU5G@1224,2KUTW@206389,2VIF8@28216,COG0183@1,COG0183@2 NA|NA|NA I Belongs to the thiolase family HGDHCNMN_00304 1304883.KI912532_gene239 1.8e-188 665.2 Rhodocyclales livK-1 ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 iAF987.Gmet_1823 Bacteria 1MXR4@1224,2KVKD@206389,2VHP9@28216,COG0683@1,COG0683@2 NA|NA|NA E amino acid HGDHCNMN_00305 159087.Daro_0383 1.2e-103 382.9 Rhodocyclales liuC 4.2.1.18 ko:K13766 ko00280,ko01100,map00280,map01100 M00036 R02085 RC02416 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVEC@1224,2KYHZ@206389,2VI5G@28216,COG1024@1,COG1024@2 NA|NA|NA I enoyl-CoA hydratase HGDHCNMN_00306 1304883.KI912532_gene238 5.8e-183 646.7 Rhodocyclales paaA 1.14.13.149 ko:K02609 ko00360,ko01120,map00360,map01120 R09838 RC02690 ko00000,ko00001,ko01000 Bacteria 1MVQ7@1224,2KUW7@206389,2VHQZ@28216,COG3396@1,COG3396@2 NA|NA|NA S Phenylacetate-CoA oxygenase subunit PaaA HGDHCNMN_00307 305700.B447_09073 1.2e-50 205.7 Rhodocyclales paaB ko:K02610 ko00360,ko01120,map00360,map01120 R09838 RC02690 ko00000,ko00001 Bacteria 1RHM5@1224,2KX2A@206389,2VSR2@28216,COG3460@1,COG3460@2 NA|NA|NA Q Phenylacetate-CoA oxygenase subunit PaaB HGDHCNMN_00308 85643.Tmz1t_1504 7.6e-122 443.4 Rhodocyclales paaC 1.14.13.149 ko:K02611 ko00360,ko01120,map00360,map01120 R09838 RC02690 ko00000,ko00001,ko01000 Bacteria 1MVYQ@1224,2KW9B@206389,2VJ03@28216,COG3396@1,COG3396@2 NA|NA|NA S Phenylacetic acid catabolic protein HGDHCNMN_00309 1123367.C666_06630 2.7e-67 261.5 Rhodocyclales paaD ko:K02612 ko00360,ko01120,map00360,map01120 R09838 RC02690 ko00000,ko00001 Bacteria 1RF3S@1224,2KWTD@206389,2VQI0@28216,COG2151@1,COG2151@2 NA|NA|NA S Phenylacetate-CoA oxygenase subunit PaaJ HGDHCNMN_00310 85643.Tmz1t_1502 3.3e-155 554.7 Rhodocyclales paaE ko:K02613 ko00360,ko01120,map00360,map01120 R09838 RC02690 ko00000,ko00001 Bacteria 1MY2Q@1224,2KUHX@206389,2VKK1@28216,COG1018@1,COG1018@2 NA|NA|NA C COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 HGDHCNMN_00311 29581.BW37_01210 4.5e-58 232.6 Oxalobacteraceae ko:K07001 ko00000 Bacteria 1MUI6@1224,2WDK7@28216,4786Z@75682,COG1752@1,COG1752@2 NA|NA|NA S Patatin-like phospholipase HGDHCNMN_00312 983917.RGE_45640 2.6e-64 252.7 Proteobacteria Bacteria 1R3D8@1224,2DN2I@1,32V6Q@2 NA|NA|NA HGDHCNMN_00313 883126.HMPREF9710_04522 2.6e-73 283.5 Oxalobacteraceae tsr1 ko:K05875 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2VGZ8@28216,473EA@75682,COG0840@1,COG0840@2 NA|NA|NA NT HAMP domain, Methyl-accepting chemotaxis protein (MCP) signaling domain HGDHCNMN_00314 977880.RALTA_B1139 6e-187 660.2 Burkholderiaceae amt ko:K03320 ko00000,ko02000 1.A.11 Bacteria 1K00W@119060,1NR9F@1224,2VI9I@28216,COG0004@1,COG0004@2 NA|NA|NA P Ammonium transporter HGDHCNMN_00315 279714.FuraDRAFT_0411 8.8e-86 323.6 Neisseriales fpr 1.18.1.2,1.19.1.1 ko:K00528,ko:K05784 ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00362,map00364,map00622,map01100,map01120,map01220 M00551 R05290,R05291,R05428,R05621,R05622,R05665,R08100,R08101,R08108,R08109,R08110,R10159 RC00270,RC01378,RC01450,RC01910 br01602,ko00000,ko00001,ko00002,ko01000 Bacteria 1MW37@1224,2KQ83@206351,2WGQC@28216,COG1018@1,COG1018@2 NA|NA|NA C Oxidoreductase NAD-binding domain protein HGDHCNMN_00316 1000565.METUNv1_02458 1.1e-24 119.8 Rhodocyclales ppdD GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 ko:K02650,ko:K02682 ko02020,map02020 ko00000,ko00001,ko02035,ko02044 3.A.15.2 Bacteria 1N7EQ@1224,2KX9R@206389,2VVSJ@28216,COG4969@1,COG4969@2 NA|NA|NA NU Pilin (bacterial filament) HGDHCNMN_00317 497321.C664_09665 9.3e-67 260.0 Rhodocyclales ampD GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 ko:K03806 ko00000,ko01000,ko01011 iAF1260.b0110,iB21_1397.B21_00108,iBWG_1329.BWG_0103,iEC55989_1330.EC55989_0103,iECBD_1354.ECBD_3509,iECB_1328.ECB_00109,iECDH10B_1368.ECDH10B_0090,iECDH1ME8569_1439.ECDH1ME8569_0104,iECD_1391.ECD_00109,iECIAI1_1343.ECIAI1_0107,iECO103_1326.ECO103_0110,iECO111_1330.ECO111_0111,iECO26_1355.ECO26_0112,iECSE_1348.ECSE_0110,iECW_1372.ECW_m0107,iEKO11_1354.EKO11_3806,iETEC_1333.ETEC_0106,iEcDH1_1363.EcDH1_3492,iEcE24377_1341.EcE24377A_0112,iEcHS_1320.EcHS_A0114,iEcolC_1368.EcolC_3549,iJO1366.b0110,iSFV_1184.SFV_0101,iSF_1195.SF0107,iSFxv_1172.SFxv_0113,iS_1188.S0109,iUMNK88_1353.UMNK88_108,iWFL_1372.ECW_m0107,iY75_1357.Y75_RS00560 Bacteria 1RDHU@1224,2KW48@206389,2VR5A@28216,COG3023@1,COG3023@2 NA|NA|NA V Negative regulator of beta-lactamase expression HGDHCNMN_00318 748247.AZKH_0630 6.9e-42 177.6 Rhodocyclales Bacteria 1RAP3@1224,2KWVV@206389,2VQXG@28216,COG0741@1,COG0741@2 NA|NA|NA M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) HGDHCNMN_00319 748247.AZKH_0631 3.1e-164 584.7 Rhodocyclales aspB Bacteria 1MW0Z@1224,2KU9I@206389,2VI01@28216,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase HGDHCNMN_00320 159087.Daro_3156 1.9e-90 339.0 Rhodocyclales ccdA ko:K06196 ko00000,ko02000 5.A.1.2 Bacteria 1MVV0@1224,2KZ0Q@206389,2W9SK@28216,COG0785@1,COG0785@2 NA|NA|NA O Cytochrome C biogenesis protein transmembrane region HGDHCNMN_00321 159087.Daro_3155 4.6e-30 137.5 Rhodocyclales ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Bacteria 1MZQJ@1224,2KZGM@206389,2VT2D@28216,COG0526@1,COG0526@2 NA|NA|NA CO Thioredoxin HGDHCNMN_00322 62928.azo0068 1.1e-60 240.0 Rhodocyclales Bacteria 1MYS7@1224,2KWS9@206389,2VTK9@28216,COG1514@1,COG1514@2 NA|NA|NA J 2'-5' RNA ligase superfamily HGDHCNMN_00323 316058.RPB_4298 7.3e-09 67.0 Proteobacteria Bacteria 1NDBA@1224,2DQXW@1,339A4@2 NA|NA|NA HGDHCNMN_00324 420662.Mpe_A3609 6.9e-31 141.4 unclassified Burkholderiales Bacteria 1KN3R@119065,1RKHK@1224,2BH5I@1,2VSSI@28216,32B6M@2 NA|NA|NA S Nuclease-related domain HGDHCNMN_00325 479431.Namu_2374 1e-169 603.6 Frankiales ina Bacteria 2GMKQ@201174,4EUZ4@85013,COG4412@1,COG4412@2 NA|NA|NA S Immune inhibitor A peptidase M6 HGDHCNMN_00326 479431.Namu_2372 2.8e-12 79.3 Actinobacteria Bacteria 2AWE2@1,2GRDR@201174,314QJ@2 NA|NA|NA HGDHCNMN_00327 1214101.BN159_0094 2.9e-62 245.7 Bacteria Bacteria COG0189@1,COG0189@2 NA|NA|NA HJ Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) HGDHCNMN_00329 1304883.KI912532_gene1084 5.9e-100 370.5 Rhodocyclales adoK GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004001,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005975,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019200,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032552,GO:0032553,GO:0032554,GO:0032555,GO:0032559,GO:0032560,GO:0032561,GO:0032567,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046390,GO:0046483,GO:0046835,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.15,2.7.1.20 ko:K00852,ko:K00856 ko00030,ko00230,ko01100,map00030,map00230,map01100 R00185,R01051,R02750 RC00002,RC00017 ko00000,ko00001,ko01000 iAF987.Gmet_2683 Bacteria 1PDQE@1224,2KUNE@206389,2VHMF@28216,COG0524@1,COG0524@2 NA|NA|NA G COG0524 Sugar kinases, ribokinase family HGDHCNMN_00330 497321.C664_18277 2.6e-29 135.2 Rhodocyclales slyB ko:K06077 ko00000 Bacteria 1RJWY@1224,2KWZB@206389,2WE8P@28216,COG3133@1,COG3133@2 NA|NA|NA M 17 kDa surface antigen HGDHCNMN_00331 62928.azo0855 2.8e-121 441.4 Rhodocyclales Bacteria 1MWIM@1224,2KU7J@206389,2VH4B@28216,COG3176@1,COG3176@2 NA|NA|NA S Acetyltransferase (GNAT) domain HGDHCNMN_00332 76114.ebA3306 4.2e-68 264.6 Rhodocyclales plsC 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1N2DG@1224,2KW55@206389,2VSJD@28216,COG0204@1,COG0204@2 NA|NA|NA I acyltransferase HGDHCNMN_00333 1454004.AW11_01539 1.2e-106 392.9 unclassified Betaproteobacteria apaH GO:0003674,GO:0003824,GO:0004551,GO:0004721,GO:0006139,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008138,GO:0008150,GO:0008152,GO:0008796,GO:0008803,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015949,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0019538,GO:0034641,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0140096,GO:1901360,GO:1901564 3.6.1.41 ko:K01525 ko00230,map00230 R00125 RC00002 ko00000,ko00001,ko01000 iECIAI39_1322.ECIAI39_0052,iEcSMS35_1347.EcSMS35_0053,iJN746.PP_0399,iSDY_1059.SDY_0074 Bacteria 1KPXN@119066,1MV10@1224,2VHV6@28216,COG0639@1,COG0639@2 NA|NA|NA T Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP HGDHCNMN_00334 640512.BC1003_0777 5.3e-206 724.2 Burkholderiaceae capD 4.2.1.115 ko:K15894 ko00520,map00520 R09697 RC02609 ko00000,ko00001,ko01000 Bacteria 1K3BJ@119060,1MWKY@1224,2VHGF@28216,COG1086@1,COG1086@2 NA|NA|NA GM Polysaccharide biosynthesis protein CapD HGDHCNMN_00335 1218084.BBJK01000030_gene2859 1.8e-75 289.7 Burkholderiaceae wbpL 2.7.8.33,2.7.8.35 ko:K02851,ko:K13007 R08856 RC00002 ko00000,ko01000,ko01003,ko01005 Bacteria 1KGYA@119060,1MWYW@1224,2VQW6@28216,COG0472@1,COG0472@2 NA|NA|NA M Glycosyl transferase, family 4 HGDHCNMN_00336 76114.ebA1635 3.3e-87 328.6 Rhodocyclales 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 Bacteria 1MX2J@1224,2KWT3@206389,2VJHC@28216,COG0451@1,COG0451@2 NA|NA|NA M NAD(P)H-binding HGDHCNMN_00337 640081.Dsui_2466 5.6e-97 360.9 Rhodocyclales lig GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 ko:K10747 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 R00381,R00382,R10822,R10823 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 Bacteria 1MUW3@1224,2KUKX@206389,2VI3P@28216,COG1793@1,COG1793@2 NA|NA|NA L DNA ligase HGDHCNMN_00338 1458357.BG58_03365 6.3e-76 290.8 Burkholderiaceae wbbL ko:K07011 ko00000 Bacteria 1JZUE@119060,1RFK0@1224,2VUIZ@28216,COG1216@1,COG1216@2 NA|NA|NA S Glycosyl transferase HGDHCNMN_00339 748247.AZKH_3775 5.6e-162 577.0 Rhodocyclales capI 5.1.3.6 ko:K08679 ko00520,ko01100,map00520,map01100 R01385 RC00289 ko00000,ko00001,ko01000 Bacteria 1MU7J@1224,2KUD6@206389,2VI0M@28216,COG0451@1,COG0451@2 NA|NA|NA M epimerase dehydratase HGDHCNMN_00340 76114.ebA1636 1.9e-136 492.7 Rhodocyclales kdtA 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 ko:K02527 ko00540,ko01100,map00540,map01100 M00060,M00080 R04658,R05074,R09763 RC00009,RC00077,RC00247 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 GT30 iIT341.HP0957 Bacteria 1MU9F@1224,2KUT0@206389,2VI67@28216,COG1519@1,COG1519@2 NA|NA|NA M 3-Deoxy-D-manno-octulosonic-acid transferase HGDHCNMN_00341 1280950.HJO_12696 7.5e-40 171.4 Alphaproteobacteria Bacteria 1RF4N@1224,2U8NZ@28211,COG1835@1,COG1835@2 NA|NA|NA I Acyltransferase family HGDHCNMN_00342 4530.OS01T0323775-00 3e-32 146.0 Liliopsida Viridiplantae 2E697@1,2SD02@2759,3825A@33090,3GRTV@35493,3M8SX@4447 NA|NA|NA HGDHCNMN_00343 62928.azo0590 1.2e-94 353.2 Rhodocyclales htrB 2.3.1.241 ko:K02517 ko00540,ko01100,map00540,map01100 M00060 R05146 RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1Q41N@1224,2KUY8@206389,2VKN0@28216,COG1560@1,COG1560@2 NA|NA|NA M acyltransferase HGDHCNMN_00344 85643.Tmz1t_3838 3e-111 408.3 Rhodocyclales lpxM GO:0003674,GO:0003824,GO:0005975,GO:0006082,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019752,GO:0036103,GO:0036104,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0046467,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.241,2.3.1.243 ko:K02517,ko:K02560 ko00540,ko01100,map00540,map01100 M00060 R05075,R05146 RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01005 iECABU_c1320.ECABU_c21170,iECIAI39_1322.ECIAI39_1194,ic_1306.c2269 Bacteria 1MVNI@1224,2KVIC@206389,2VICZ@28216,COG1560@1,COG1560@2 NA|NA|NA M Lipid A biosynthesis acyltransferase HGDHCNMN_00345 1304883.KI912532_gene985 7.3e-09 66.2 Rhodocyclales Bacteria 1NIA2@1224,2ERF9@1,2KXJD@206389,2VYNH@28216,33J0T@2 NA|NA|NA HGDHCNMN_00346 748247.AZKH_4453 1.1e-98 366.3 Rhodocyclales trmB GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0040007,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.297,2.1.1.33,2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 ko:K02493,ko:K02527,ko:K03439 ko00540,ko01100,map00540,map01100 M00060,M00080 R04658,R05074,R09763,R10806 RC00003,RC00009,RC00077,RC00247,RC03279 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005,ko03012,ko03016 GT30 Bacteria 1MUWJ@1224,2KUWG@206389,2VJN2@28216,COG0220@1,COG0220@2 NA|NA|NA J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA HGDHCNMN_00347 76114.c1A46 1.2e-119 436.0 Rhodocyclales thiG GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 ko:K03149 ko00730,ko01100,map00730,map01100 R10247 RC03096,RC03097,RC03461 ko00000,ko00001,ko01000 Bacteria 1N0N5@1224,2KURE@206389,2VJ8T@28216,COG2022@1,COG2022@2 NA|NA|NA H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S HGDHCNMN_00348 1123487.KB892834_gene2677 1.2e-19 102.1 Rhodocyclales thiS GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 ko:K03149,ko:K03154 ko00730,ko01100,ko04122,map00730,map01100,map04122 R10247 RC03096,RC03097,RC03461 ko00000,ko00001,ko01000 Bacteria 1NG8E@1224,2KX6R@206389,2VVVB@28216,COG2104@1,COG2104@2 NA|NA|NA H COG2104 Sulfur transfer protein involved in thiamine biosynthesis HGDHCNMN_00350 757424.Hsero_1214 2.7e-113 415.2 Betaproteobacteria mrr ko:K07448 ko00000,ko02048 Bacteria 1Q2VY@1224,2VPK0@28216,COG1715@1,COG1715@2 NA|NA|NA L restriction endonuclease HGDHCNMN_00351 1268622.AVS7_03916 2.4e-127 461.8 Comamonadaceae 2.1.1.191 ko:K06969 ko00000,ko01000,ko03009 Bacteria 1PUHQ@1224,2WGBZ@28216,4ACMM@80864,COG1092@1,COG1092@2 NA|NA|NA J Belongs to the methyltransferase superfamily HGDHCNMN_00352 1000565.METUNv1_00319 6e-15 87.4 Rhodocyclales fliL GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009425,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02415 ko00000,ko02035 Bacteria 1RARK@1224,2KWNP@206389,2VTGH@28216,COG1580@1,COG1580@2 NA|NA|NA N Controls the rotational direction of flagella during chemotaxis HGDHCNMN_00354 1304883.KI912532_gene2003 3.4e-98 365.9 Rhodocyclales Bacteria 1RCM9@1224,2KV5M@206389,2VJGE@28216,COG4191@1,COG4191@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_00355 264198.Reut_B4317 5.6e-142 510.8 Burkholderiaceae namA 1.14.13.40,1.6.99.1 ko:K00354,ko:K09461 ko00627,ko01120,map00627,map01120 R00282,R03998,R03999 RC00001,RC00244 ko00000,ko00001,ko01000 Bacteria 1K3NA@119060,1MVE0@1224,2VHDY@28216,COG1902@1,COG1902@2 NA|NA|NA C NADH flavin oxidoreductase NADH oxidase HGDHCNMN_00356 159087.Daro_1934 2.4e-135 490.3 Betaproteobacteria arcB Bacteria 1NC9X@1224,2WGIN@28216,COG0784@1,COG0784@2,COG3290@1,COG3290@2,COG5002@1,COG5002@2 NA|NA|NA T Histidine kinase HGDHCNMN_00357 62928.azo0856 3.2e-119 435.3 Rhodocyclales Bacteria 1MUB7@1224,2KURY@206389,2VJ5X@28216,COG0438@1,COG0438@2 NA|NA|NA M Glycosyltransferase Family 4 HGDHCNMN_00359 497321.C664_17055 8.8e-29 133.7 Rhodocyclales Z012_02020 Bacteria 1NHRC@1224,2KXB4@206389,2VW9Q@28216,COG4701@1,COG4701@2 NA|NA|NA S Protein of unknown function (DUF721) HGDHCNMN_00360 497321.C664_17060 0.0 1487.6 Rhodocyclales secA GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006457,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015627,GO:0015628,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042802,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061077,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:0098776,GO:1901265,GO:1901363,GO:1904680 ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 Bacteria 1MUJZ@1224,2KVJC@206389,2VHDH@28216,COG0653@1,COG0653@2 NA|NA|NA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane HGDHCNMN_00361 748247.AZKH_3716 6.7e-100 371.3 Rhodocyclales Bacteria 1NJC4@1224,2KVTS@206389,2VHRZ@28216,COG1639@1,COG1639@2,COG2203@1,COG2203@2 NA|NA|NA T Domain present in phytochromes and cGMP-specific phosphodiesterases. HGDHCNMN_00362 748247.AZKH_3715 4.6e-182 644.0 Rhodocyclales argJ GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35,2.7.2.8 ko:K00620,ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R00259,R02282,R02649 RC00002,RC00004,RC00043,RC00064 ko00000,ko00001,ko00002,ko01000 iLJ478.TM1783 Bacteria 1MU0T@1224,2KUJ7@206389,2VJ84@28216,COG1364@1,COG1364@2 NA|NA|NA E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate HGDHCNMN_00363 305700.B447_17776 7.6e-137 493.8 Rhodocyclales ko:K02004,ko:K09808 ko02010,map02010 M00255,M00258 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.125 Bacteria 1R4Q2@1224,2KV6R@206389,2VKX2@28216,COG4591@1,COG4591@2 NA|NA|NA M MacB-like periplasmic core domain HGDHCNMN_00364 305700.B447_17771 3.1e-130 471.9 Rhodocyclales lolE_2 ko:K02004,ko:K09808 ko02010,map02010 M00255,M00258 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.125 Bacteria 1R4Q2@1224,2KUSJ@206389,2VP40@28216,COG4591@1,COG4591@2 NA|NA|NA M MacB-like periplasmic core domain HGDHCNMN_00365 1266925.JHVX01000007_gene2302 1.6e-07 63.5 Betaproteobacteria Bacteria 1NCPA@1224,2DQSD@1,2VW7A@28216,338DJ@2 NA|NA|NA HGDHCNMN_00367 1000565.METUNv1_02410 4.7e-37 162.5 Rhodocyclales Bacteria 1R6PQ@1224,2CG4C@1,2KVNU@206389,2VHKG@28216,2Z8MQ@2 NA|NA|NA HGDHCNMN_00368 1123487.KB892846_gene568 9.2e-103 380.6 Rhodocyclales pilC2 ko:K02653 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1MV4U@1224,2KU71@206389,2VI1J@28216,COG1459@1,COG1459@2 NA|NA|NA NU type II secretion system protein HGDHCNMN_00369 1000565.METUNv1_02412 3.3e-215 754.6 Rhodocyclales xcpR 4.6.1.1 ko:K01768,ko:K02454,ko:K02652 ko00230,ko02025,ko03070,ko04113,ko04213,ko05111,map00230,map02025,map03070,map04113,map04213,map05111 M00331,M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1MU7V@1224,2KUQA@206389,2VHQ1@28216,COG2804@1,COG2804@2 NA|NA|NA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB HGDHCNMN_00370 1349767.GJA_2108 1.4e-17 97.4 Betaproteobacteria Bacteria 1RKBG@1224,2VQFW@28216,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeats HGDHCNMN_00371 1121035.AUCH01000003_gene1192 2.4e-171 609.0 Rhodocyclales outD ko:K02453,ko:K12282 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1MVNC@1224,2KUZ5@206389,2VMT1@28216,COG1450@1,COG1450@2 NA|NA|NA NU Type II and III secretion system protein HGDHCNMN_00372 497321.C664_01580 0.0 1203.0 Rhodocyclales acsA 6.2.1.1 ko:K01895 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1MUF5@1224,2KUJV@206389,2VIP3@28216,COG0365@1,COG0365@2 NA|NA|NA H Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA HGDHCNMN_00373 305700.B447_00375 9.4e-10 68.9 Rhodocyclales Bacteria 1NJ4Q@1224,2DS4B@1,2KZB2@206389,2WGB4@28216,33EG1@2 NA|NA|NA HGDHCNMN_00374 1123399.AQVE01000004_gene2680 3.6e-48 197.6 Proteobacteria Bacteria 1NZS6@1224,344J8@2,arCOG12574@1 NA|NA|NA HGDHCNMN_00375 1123399.AQVE01000004_gene2681 1.7e-116 426.4 Gammaproteobacteria ko:K06907 ko00000 Bacteria 1R9R0@1224,1SN4X@1236,COG3497@1,COG3497@2 NA|NA|NA S Phage tail sheath C-terminal domain HGDHCNMN_00376 522306.CAP2UW1_2207 4.9e-123 449.5 Bacteria Bacteria COG3064@1,COG3064@2 NA|NA|NA M translation initiation factor activity HGDHCNMN_00377 221288.JH992901_gene5747 5.5e-81 308.5 Bacteria Bacteria 28KMN@1,2ZA61@2 NA|NA|NA HGDHCNMN_00378 522306.CAP2UW1_2886 2.5e-54 219.2 Proteobacteria 1.1.1.305,2.1.2.13,2.1.2.9 ko:K00604,ko:K10011 ko00520,ko00670,ko00970,ko01503,map00520,map00670,map00970,map01503 M00721,M00761 R03940,R07658,R07660 RC00026,RC00165,RC01575,RC01812 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1RERW@1224,COG0223@1,COG0223@2 NA|NA|NA J Formyl transferase HGDHCNMN_00379 522306.CAP2UW1_2885 4.3e-93 348.2 Betaproteobacteria CP_0258 ko:K01989 M00247 ko00000,ko00002,ko02000 Bacteria 1MW5D@1224,2VIC1@28216,COG2984@1,COG2984@2 NA|NA|NA S Abc transporter HGDHCNMN_00380 522306.CAP2UW1_2884 8.4e-105 388.3 Betaproteobacteria Bacteria 1MXKN@1224,2VTVU@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HGDHCNMN_00381 748247.AZKH_0705 1.6e-138 499.2 Rhodocyclales ftsY GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019897,GO:0019898,GO:0031224,GO:0031226,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033036,GO:0033365,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2,3.A.5.7 Bacteria 1MUDU@1224,2KVC3@206389,2VHK7@28216,COG0552@1,COG0552@2 NA|NA|NA U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components HGDHCNMN_00382 748247.AZKH_0704 7.4e-173 613.6 Rhodocyclales MA20_05655 ko:K07263 ko00000,ko01000,ko01002 Bacteria 1MVST@1224,2KV63@206389,2VHVB@28216,COG0612@1,COG0612@2 NA|NA|NA S Belongs to the peptidase M16 family HGDHCNMN_00383 497321.C664_16153 6.7e-142 510.8 Rhodocyclales MA20_05660 ko:K07263 ko00000,ko01000,ko01002 Bacteria 1MU6R@1224,2KV10@206389,2VH8D@28216,COG0612@1,COG0612@2 NA|NA|NA S Peptidase M16 HGDHCNMN_00384 85643.Tmz1t_3619 9e-58 229.9 Rhodocyclales rsmD GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052913,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.171 ko:K08316 R07234 RC00003 ko00000,ko01000,ko03009 Bacteria 1MXKW@1224,2KWFM@206389,2VRD3@28216,COG0742@1,COG0742@2 NA|NA|NA L methyltransferase HGDHCNMN_00385 76114.ebA1397 2.3e-68 265.0 Rhodocyclales coaD GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0015939,GO:0015940,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046390,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 iPC815.YPO0053,iSDY_1059.SDY_4064 Bacteria 1RD9F@1224,2KW7T@206389,2VMQQ@28216,COG0669@1,COG0669@2 NA|NA|NA H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate HGDHCNMN_00386 497321.C664_16138 2.8e-38 164.1 Rhodocyclales fdx1 ko:K03522,ko:K05337 ko00000,ko04147 Bacteria 1MZ6H@1224,2KX13@206389,2VTZ1@28216,COG1145@1,COG1145@2 NA|NA|NA C Ferredoxin HGDHCNMN_00387 85643.Tmz1t_3622 1.6e-261 908.7 Rhodocyclales Bacteria 1MXBK@1224,2KUHM@206389,2VKA1@28216,COG0699@1,COG0699@2 NA|NA|NA S Dynamin family HGDHCNMN_00388 497321.C664_16128 1.6e-94 352.4 Rhodocyclales fpg GO:0000702,GO:0000703,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0008534,GO:0009987,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363 3.2.2.23,4.2.99.18 ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MVM5@1224,2KVBM@206389,2VI10@28216,COG0266@1,COG0266@2 NA|NA|NA L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates HGDHCNMN_00389 1120999.JONM01000030_gene3266 2.6e-35 154.5 Neisseriales ko:K07483 ko00000 Bacteria 1N335@1224,2KT95@206351,2VUUC@28216,COG2963@1,COG2963@2 NA|NA|NA L Winged helix-turn helix HGDHCNMN_00390 1265502.KB905972_gene1341 7.7e-64 250.8 Comamonadaceae Bacteria 1NZ1M@1224,2VR7D@28216,4AJE8@80864,COG5281@1,COG5281@2 NA|NA|NA D sister chromatid segregation HGDHCNMN_00391 535289.Dtpsy_3452 3.2e-55 222.6 Comamonadaceae Tnr ko:K20276 ko02024,map02024 ko00000,ko00001 Bacteria 1R55I@1224,2VR0I@28216,4AFQ2@80864,COG4733@1,COG4733@2 NA|NA|NA S cellulase activity HGDHCNMN_00392 1178482.BJB45_05500 4.7e-142 511.9 Oceanospirillales Bacteria 1MWTW@1224,1S3FP@1236,1XNZQ@135619,COG5361@1,COG5361@2 NA|NA|NA S Protein of unknown function (DUF1254) HGDHCNMN_00393 935557.ATYB01000014_gene1915 3.4e-197 694.5 Rhizobiaceae Bacteria 1NX2A@1224,2TTBA@28211,4BAZE@82115,COG5361@1,COG5361@2 NA|NA|NA S Protein of unknown function (DUF1254) HGDHCNMN_00394 748247.AZKH_0711 8.6e-94 350.5 Rhodocyclales ndpA ko:K06899 ko00000,ko03036 Bacteria 1NXJU@1224,2KW9V@206389,2VP4C@28216,COG3081@1,COG3081@2 NA|NA|NA S nucleoid-associated protein HGDHCNMN_00396 1121035.AUCH01000002_gene1549 1.6e-43 182.2 Rhodocyclales dgkA 2.7.1.107 ko:K00901 ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00561,map00564,map01100,map01110,map04070,map04072,map05231 R02240 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1MZ3Q@1224,2KWKX@206389,2VU5Y@28216,COG0818@1,COG0818@2 NA|NA|NA M Recycling of diacylglycerol produced during the turnover of membrane phospholipid HGDHCNMN_00397 1100720.ALKN01000037_gene1869 9.4e-56 223.8 Comamonadaceae MA20_38155 3.1.1.24 ko:K01055 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 M00568 R02991 RC00825 ko00000,ko00001,ko00002,ko01000 Bacteria 1P7JV@1224,2VR0X@28216,4AF11@80864,COG2267@1,COG2267@2 NA|NA|NA I Alpha beta hydrolase HGDHCNMN_00398 748247.AZKH_4466 1.7e-47 195.7 Rhodocyclales ntaB Bacteria 1RGYM@1224,2KWJW@206389,2VQA1@28216,COG1853@1,COG1853@2 NA|NA|NA K COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family HGDHCNMN_00399 62928.azo3812 2.2e-132 478.8 Rhodocyclales mutY GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MUD4@1224,2KUFV@206389,2VH21@28216,COG1194@1,COG1194@2 NA|NA|NA L A G-specific HGDHCNMN_00400 62928.azo2974 3.8e-31 141.4 Rhodocyclales ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 Bacteria 1N36E@1224,2KWXM@206389,2VUSZ@28216,COG2010@1,COG2010@2 NA|NA|NA C Cytochrome C oxidase, cbb3-type, subunit III HGDHCNMN_00402 1304883.KI912532_gene1821 0.0 1125.9 Rhodocyclales pedE 1.1.2.8,1.1.5.11 ko:K00114,ko:K20937 ko00010,ko00625,ko01100,ko01110,ko01120,ko01130,map00010,map00625,map01100,map01110,map01120,map01130 R05062,R05198,R05285 RC00087,RC00088,RC01039 ko00000,ko00001,ko01000 Bacteria 1MUQX@1224,2KV1B@206389,2VJQ1@28216,COG4993@1,COG4993@2 NA|NA|NA G PQQ-like domain HGDHCNMN_00404 497321.C664_06453 4.3e-215 754.2 Rhodocyclales aarF ko:K03688 ko00000 Bacteria 1MU1Z@1224,2KZS4@206389,2VJ9H@28216,COG0661@1,COG0661@2 NA|NA|NA S ABC1 family HGDHCNMN_00405 1454004.AW11_03552 5.2e-75 287.7 Betaproteobacteria phnE 3.6.1.63 ko:K02042,ko:K06162 ko00440,ko02010,map00440,map02010 M00223 R10186 RC00002 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.9 Bacteria 1N3HU@1224,2VMR7@28216,COG3639@1,COG3639@2 NA|NA|NA P binding-protein-dependent transport systems inner membrane component HGDHCNMN_00406 1454004.AW11_03552 4.5e-93 347.8 Betaproteobacteria phnE 3.6.1.63 ko:K02042,ko:K06162 ko00440,ko02010,map00440,map02010 M00223 R10186 RC00002 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.9 Bacteria 1N3HU@1224,2VMR7@28216,COG3639@1,COG3639@2 NA|NA|NA P binding-protein-dependent transport systems inner membrane component HGDHCNMN_00407 1226994.AMZB01000138_gene5647 1.1e-88 333.2 Pseudomonas aeruginosa group phnC 3.6.3.28 ko:K02041 ko02010,map02010 M00223 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.9 Bacteria 1MXYA@1224,1SYD0@1236,1YFCB@136841,COG3638@1,COG3638@2 NA|NA|NA P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system HGDHCNMN_00408 1304883.KI912532_gene2281 3.2e-121 441.4 Rhodocyclales phnD ko:K02044 ko02010,map02010 M00223 ko00000,ko00001,ko00002,ko02000 3.A.1.9 Bacteria 1MWFF@1224,2KZ2X@206389,2VMDZ@28216,COG3221@1,COG3221@2 NA|NA|NA P ABC transporter, phosphonate, periplasmic substrate-binding protein HGDHCNMN_00409 640081.Dsui_1878 4.1e-119 434.5 Rhodocyclales yijE GO:0000099,GO:0000101,GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:1901682,GO:1903825,GO:1905039 Bacteria 1NEYM@1224,2KW5W@206389,2VPAG@28216,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family HGDHCNMN_00410 522306.CAP2UW1_2374 4.5e-121 441.0 unclassified Betaproteobacteria ywkB ko:K07088 ko00000 Bacteria 1KQZ7@119066,1MY23@1224,2VI9B@28216,COG0679@1,COG0679@2 NA|NA|NA S Membrane transport protein HGDHCNMN_00411 522306.CAP2UW1_2410 1.5e-152 545.8 Betaproteobacteria gspE ko:K02454,ko:K02652 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1MU7V@1224,2VHQ1@28216,COG2804@1,COG2804@2 NA|NA|NA NU type II secretion system protein E HGDHCNMN_00412 395495.Lcho_2507 1.3e-142 512.7 unclassified Burkholderiales rlmN 2.1.1.192 ko:K06941 ko00000,ko01000,ko03009 Bacteria 1KJ7U@119065,1Q0HH@1224,2VMGJ@28216,COG0820@1,COG0820@2 NA|NA|NA J Belongs to the radical SAM superfamily. RlmN family HGDHCNMN_00413 1192124.LIG30_2077 1.5e-143 516.5 Burkholderiaceae Bacteria 1K3E2@119060,1MWEC@1224,2VJXF@28216,COG2831@1,COG2831@2 NA|NA|NA U Polypeptide-transport-associated domain protein ShlB-type HGDHCNMN_00414 1000565.METUNv1_01173 2.2e-51 209.1 Rhodocyclales Bacteria 1Q227@1224,2KX4T@206389,2VSH1@28216,COG1262@1,COG1262@2 NA|NA|NA S SapC HGDHCNMN_00420 748247.AZKH_0913 7.1e-135 486.9 Rhodocyclales hemC GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018065,GO:0018130,GO:0018160,GO:0018193,GO:0018198,GO:0019438,GO:0019538,GO:0033013,GO:0033014,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,2.5.1.61,4.2.1.75 ko:K01749,ko:K13542 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R00084,R03165,R03194 RC00003,RC00871,RC01861,RC02317 ko00000,ko00001,ko00002,ko01000 iEC55989_1330.EC55989_4275,iECH74115_1262.ECH74115_5243,iECIAI1_1343.ECIAI1_3991,iECO103_1326.ECO103_4362,iECO111_1330.ECO111_4628,iECO26_1355.ECO26_4784,iECSE_1348.ECSE_4086,iEKO11_1354.EKO11_4554,iHN637.CLJU_RS15760,iPC815.YPO3849 Bacteria 1MU56@1224,2KVQ9@206389,2VHT4@28216,COG0181@1,COG0181@2 NA|NA|NA H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps HGDHCNMN_00421 748247.AZKH_0912 0.0 1368.2 Rhodocyclales ppc GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008964,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.1.1.31 ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 M00168,M00170,M00171,M00172,M00173,M00346,M00374 R00345 RC02741 ko00000,ko00001,ko00002,ko01000 iJN678.ppc,iSFV_1184.SFV_4025 Bacteria 1MUD5@1224,2KUMU@206389,2VI9F@28216,COG2352@1,COG2352@2 NA|NA|NA H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle HGDHCNMN_00422 1123367.C666_13485 2.3e-154 551.6 Rhodocyclales ppk2 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005525,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006183,GO:0006464,GO:0006468,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009889,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0030808,GO:0031323,GO:0031326,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0036211,GO:0040007,GO:0042278,GO:0042451,GO:0042455,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046777,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051704,GO:0055086,GO:0062012,GO:0065007,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0080090,GO:0090407,GO:0097159,GO:0097367,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.4.1 ko:K22468 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 1MVE2@1224,2KUW9@206389,2VGZV@28216,COG2326@1,COG2326@2 NA|NA|NA S Polyphosphate kinase 2 (PPK2) HGDHCNMN_00423 1163617.SCD_n02028 3.5e-138 498.0 Betaproteobacteria cah 4.2.1.1 ko:K01673 ko00910,map00910 R00132,R10092 RC02807 ko00000,ko00001,ko01000 Bacteria 1MXW3@1224,2VP29@28216,COG0288@1,COG0288@2 NA|NA|NA P Carboxysome Shell Carbonic Anhydrase HGDHCNMN_00425 76114.ebA4278 6.4e-128 464.2 Rhodocyclales Bacteria 1R94Z@1224,2KZIH@206389,2WAN4@28216,COG3919@1,COG3919@2 NA|NA|NA S ATP-grasp domain HGDHCNMN_00426 1500894.JQNN01000001_gene3499 1.3e-47 198.0 Bacteria Bacteria COG5617@1,COG5617@2 NA|NA|NA M Psort location CytoplasmicMembrane, score HGDHCNMN_00427 977880.RALTA_B1937 2.1e-76 292.7 Burkholderiaceae ko:K20534 ko00000,ko01000,ko01005,ko02000 4.D.2.1.9 GT2 Bacteria 1K03G@119060,1MWE5@1224,2VIY2@28216,COG0463@1,COG0463@2 NA|NA|NA M Pfam Glycosyl transferase family 2 HGDHCNMN_00429 76114.ebA4281 1.4e-96 359.8 Betaproteobacteria 3.5.1.104 ko:K22278 ko00000,ko01000 Bacteria 1RDB8@1224,2VY2J@28216,COG0726@1,COG0726@2 NA|NA|NA G polysaccharide deacetylase HGDHCNMN_00430 76114.ebA4284 2.1e-42 179.1 Betaproteobacteria 3.1.3.48 ko:K01104 ko00000,ko01000 Bacteria 1NA6Z@1224,2W4ZZ@28216,COG0394@1,COG0394@2 NA|NA|NA T Low molecular weight phosphatase family HGDHCNMN_00431 62928.azo1507 0.0 1124.8 Rhodocyclales ygiQ Bacteria 1MUG3@1224,2KV3Z@206389,2VJ9A@28216,COG1032@1,COG1032@2 NA|NA|NA C UPF0313 protein HGDHCNMN_00432 857087.Metme_1207 4.8e-50 205.3 Gammaproteobacteria Bacteria 1RF4N@1224,1S7UV@1236,COG1835@1,COG1835@2 NA|NA|NA I Acyltransferase family HGDHCNMN_00433 748247.AZKH_0889 1.5e-93 349.4 Rhodocyclales algR ko:K02477,ko:K08083 ko02020,map02020 M00493 ko00000,ko00001,ko00002,ko02022 Bacteria 1MVJI@1224,2KVZZ@206389,2VPZX@28216,COG3279@1,COG3279@2 NA|NA|NA K LytTr DNA-binding domain HGDHCNMN_00434 497321.C664_14459 4.5e-90 338.2 Rhodocyclales algZ 2.7.13.3 ko:K08082 ko02020,map02020 M00493 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MXVQ@1224,2KUPR@206389,2VH9S@28216,COG2972@1,COG2972@2 NA|NA|NA T alginate biosynthesis protein AlgZ FimS HGDHCNMN_00435 85643.Tmz1t_1433 6.6e-228 796.6 Rhodocyclales argH GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MUTU@1224,2KVGH@206389,2VH47@28216,COG0165@1,COG0165@2 NA|NA|NA E argininosuccinate lyase HGDHCNMN_00436 62928.azo0988 8.8e-160 570.1 Rhodocyclales pp2c12 2.7.11.1,3.1.3.16 ko:K12132,ko:K20074 ko00000,ko01000,ko01001,ko01009 Bacteria 1MV1P@1224,2KU89@206389,2VIE9@28216,COG0515@1,COG0515@2,COG0664@1,COG0664@2 NA|NA|NA KLT serine threonine protein kinase HGDHCNMN_00439 1304883.KI912532_gene2933 9.2e-119 433.3 Rhodocyclales Bacteria 1MWU5@1224,2KWDV@206389,2VHDB@28216,COG5265@1,COG5265@2 NA|NA|NA O HPr kinase HGDHCNMN_00440 1304883.KI912532_gene2932 5.4e-113 414.5 Rhodocyclales Bacteria 1MXKT@1224,28JAH@1,2KW5D@206389,2VI69@28216,2Z95A@2 NA|NA|NA S Uncharacterised nucleotidyltransferase HGDHCNMN_00441 305700.B447_17124 2.7e-38 164.5 Rhodocyclales grxD GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051536,GO:0051537,GO:0051540 ko:K07390 ko00000,ko03029,ko03110 iPC815.YPO2383,iYL1228.KPN_01992 Bacteria 1MZ4V@1224,2KWQF@206389,2VSCX@28216,COG0278@1,COG0278@2 NA|NA|NA C Belongs to the glutaredoxin family. Monothiol subfamily HGDHCNMN_00442 85643.Tmz1t_1425 1.9e-75 289.3 Rhodocyclales prmC 2.1.1.297,2.1.1.298 ko:K02493,ko:K07320 R10806 RC00003,RC03279 ko00000,ko01000,ko03009,ko03012 Bacteria 1MXCQ@1224,2KW1H@206389,2VP72@28216,COG2890@1,COG2890@2 NA|NA|NA J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif HGDHCNMN_00443 1123487.KB892834_gene2856 8e-154 550.1 Rhodocyclales prfA GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02835,ko:K15034 ko00000,ko03012 Bacteria 1MV28@1224,2KV7M@206389,2VJKV@28216,COG0216@1,COG0216@2 NA|NA|NA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA HGDHCNMN_00444 1123367.C666_01660 3.9e-181 641.0 Rhodocyclales hemA GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006082,GO:0006520,GO:0006536,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008883,GO:0009058,GO:0009064,GO:0009288,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019353,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0033526,GO:0034641,GO:0042168,GO:0042440,GO:0042597,GO:0042802,GO:0042995,GO:0043226,GO:0043228,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0055040,GO:0055114,GO:0071704,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.2.1.70 ko:K02407,ko:K02492 ko00860,ko01100,ko01110,ko01120,ko02040,map00860,map01100,map01110,map01120,map02040 M00121 R04109 RC00055,RC00149 ko00000,ko00001,ko00002,ko01000,ko02035 iECNA114_1301.ECNA114_1375,iECSF_1327.ECSF_1186,iSB619.SA_RS08420,iUTI89_1310.UTI89_C1404 Bacteria 1MU41@1224,2KV1D@206389,2VHNC@28216,COG0373@1,COG0373@2 NA|NA|NA H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) HGDHCNMN_00445 640081.Dsui_0504 1.3e-85 323.2 Rhodocyclales yneE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K08994 ko00000,ko02000 1.A.46.2 Bacteria 1MX91@1224,2KW01@206389,2VHY9@28216,COG3781@1,COG3781@2 NA|NA|NA S Bestrophin, RFP-TM, chloride channel HGDHCNMN_00446 265072.Mfla_1315 2.9e-89 335.1 Nitrosomonadales ko:K07274 ko00000,ko02000 9.B.99.1 Bacteria 1MWQN@1224,2KMBI@206350,2VX3J@28216,COG3713@1,COG3713@2 NA|NA|NA M MltA-interacting protein MipA HGDHCNMN_00447 864051.BurJ1DRAFT_3766 2.5e-49 202.6 Betaproteobacteria Bacteria 1RGIQ@1224,2BWSC@1,2W4KA@28216,32R00@2 NA|NA|NA S exosortase interaction domain HGDHCNMN_00448 1538295.JY96_20230 2.1e-48 198.4 unclassified Burkholderiales XK27_05000 ko:K06940 ko00000 Bacteria 1KNPJ@119065,1RI32@1224,2VRGA@28216,COG0727@1,COG0727@2 NA|NA|NA S Putative zinc- or iron-chelating domain HGDHCNMN_00449 159087.Daro_2106 4.1e-188 666.0 Rhodocyclales Bacteria 1MXIP@1224,2KXC4@206389,2VJ6Y@28216,COG3210@1,COG3210@2 NA|NA|NA U haemagglutination activity domain HGDHCNMN_00450 159087.Daro_2107 5.6e-159 567.8 Rhodocyclales hxuB GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 Bacteria 1MWEC@1224,2KX5Q@206389,2VJXF@28216,COG2831@1,COG2831@2 NA|NA|NA U Haemolysin secretion/activation protein ShlB/FhaC/HecB HGDHCNMN_00451 1538295.JY96_20230 7.8e-54 216.5 unclassified Burkholderiales XK27_05000 ko:K06940 ko00000 Bacteria 1KNPJ@119065,1RI32@1224,2VRGA@28216,COG0727@1,COG0727@2 NA|NA|NA S Putative zinc- or iron-chelating domain HGDHCNMN_00452 1304883.KI912532_gene3151 2.1e-122 446.0 Rhodocyclales bdlA ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2KVRI@206389,2VGZ8@28216,COG0840@1,COG0840@2 NA|NA|NA NT Chemotaxis sensory transducer HGDHCNMN_00453 1366050.N234_24100 1.2e-09 70.5 Burkholderiaceae Bacteria 1KC51@119060,1NSR2@1224,2EW44@1,2W14K@28216,33PHB@2 NA|NA|NA HGDHCNMN_00454 196367.JNFG01000090_gene3771 9.2e-31 139.8 Burkholderiaceae ko:K07481 ko00000 Bacteria 1K1CT@119060,1MVTU@1224,2VK8B@28216,COG3039@1,COG3039@2 NA|NA|NA L COG Transposase and inactivated derivatives, IS5 family HGDHCNMN_00455 1304883.KI912532_gene1857 1.1e-208 733.8 Betaproteobacteria Bacteria 1RGKE@1224,2WHKS@28216,COG0642@1,COG0642@2,COG2203@1,COG2203@2,COG2703@1,COG2703@2 NA|NA|NA T Domain present in phytochromes and cGMP-specific phosphodiesterases. HGDHCNMN_00456 1430440.MGMSRv2_1566 1.2e-103 383.3 Rhodospirillales ko:K10439,ko:K10440 ko02010,ko02030,map02010,map02030 M00212 ko00000,ko00001,ko00002,ko02000 3.A.1.2.1,3.A.1.2.13,3.A.1.2.19 Bacteria 1MX32@1224,2JUY5@204441,2U3N1@28211,COG2199@1,COG2199@2,COG2203@1,COG2203@2 NA|NA|NA T GAF domain HGDHCNMN_00457 85643.Tmz1t_2712 1.3e-108 399.4 Betaproteobacteria Bacteria 1QVTB@1224,2VTTN@28216,COG2755@1,COG2755@2 NA|NA|NA E lipolytic protein G-D-S-L family HGDHCNMN_00458 388051.AUFE01000007_gene1541 2e-44 184.9 Burkholderiaceae ynfA GO:0005575,GO:0005576 ko:K09771 ko00000,ko02000 2.A.7.26 Bacteria 1K8EY@119060,1MZI8@1224,2VUNG@28216,COG1742@1,COG1742@2 NA|NA|NA S UPF0060 membrane protein HGDHCNMN_00459 118166.JH976538_gene5372 5.1e-12 77.4 Cyanobacteria Bacteria 1GETU@1117,2C83S@1,340UQ@2 NA|NA|NA HGDHCNMN_00460 159087.Daro_3257 4.8e-72 277.7 Rhodocyclales ddpX 3.4.13.22 ko:K08641 ko01502,ko02020,map01502,map02020 M00651 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 Bacteria 1PSR8@1224,2KYQA@206389,2VV4Y@28216,COG3786@1,COG3786@2 NA|NA|NA S Protein conserved in bacteria HGDHCNMN_00461 1304883.KI912532_gene2066 1.7e-200 705.3 Rhodocyclales spmB ko:K06373,ko:K06374 ko00000 Bacteria 1MVZ0@1224,2KUB3@206389,2VKEY@28216,COG0700@1,COG0700@2,COG2715@1,COG2715@2 NA|NA|NA S Nucleoside recognition HGDHCNMN_00463 1304883.KI912532_gene1842 1.9e-105 389.0 Rhodocyclales rrmA GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008270,GO:0008649,GO:0008757,GO:0008989,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0052912,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.187 ko:K00563 R07233 RC00003 ko00000,ko01000,ko03009 Bacteria 1MXDY@1224,2KXQQ@206389,2VJJM@28216,COG0500@1,COG2226@2 NA|NA|NA Q Methyltransferase domain HGDHCNMN_00464 76114.ebA6362 1.8e-77 296.2 Rhodocyclales 5.99.1.2 ko:K03169,ko:K07448 ko00000,ko01000,ko02048,ko03032 Bacteria 1RAHG@1224,2KVQW@206389,2VNZE@28216,COG0551@1,COG0551@2,COG1787@1,COG1787@2 NA|NA|NA V Restriction endonuclease HGDHCNMN_00465 159087.Daro_1722 4.7e-67 261.5 Rhodocyclales speE2 2.5.1.16 ko:K00797 ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100 M00034,M00133 R01920,R02869,R08359 RC00021,RC00053 ko00000,ko00001,ko00002,ko01000 Bacteria 1RBWW@1224,2KW56@206389,2VQ5B@28216,COG0421@1,COG0421@2 NA|NA|NA E Spermidine synthase HGDHCNMN_00466 1123487.KB892843_gene784 3.8e-59 236.1 Rhodocyclales ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2KYJK@206389,2VQBW@28216,COG0840@1,COG0840@2 NA|NA|NA NT Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). HGDHCNMN_00468 640081.Dsui_0422 4.5e-18 96.3 Rhodocyclales thiC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 ko:K03147 ko00730,ko01100,map00730,map01100 M00127 R03472 RC03251,RC03252 ko00000,ko00001,ko00002,ko01000 iECABU_c1320.ECABU_c45100 Bacteria 1MUVV@1224,2KV81@206389,2VHS3@28216,COG0422@1,COG0422@2 NA|NA|NA H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction HGDHCNMN_00470 1120999.JONM01000001_gene1361 6.2e-128 465.7 Neisseriales 2.7.13.3,2.7.7.65,4.6.1.1 ko:K01768,ko:K07675,ko:K20959 ko00230,ko02020,ko02025,ko04113,ko04213,ko05111,map00230,map02020,map02025,map04113,map04213,map05111 M00473,M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1NRP8@1224,2KU5Q@206351,2VGZQ@28216,COG0642@1,COG2205@2,COG3614@1,COG3614@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_00471 1121004.ATVC01000016_gene1763 5.5e-137 494.2 Betaproteobacteria 5.1.99.4 ko:K01796 ko00120,ko01100,ko04146,map00120,map01100,map04146 M00104 R08734,R08739 RC02345 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW1H@1224,2VJJQ@28216,COG1804@1,COG1804@2 NA|NA|NA C L-carnitine dehydratase bile acid-inducible protein F HGDHCNMN_00472 748247.AZKH_0739 8.6e-118 429.9 Rhodocyclales echA8_3 4.2.1.17 ko:K01692,ko:K07534 ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,ko01220,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212,map01220 M00032,M00087,M00540 R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R05600,R06411,R06412,R06942,R08093 RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02034,RC02115 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWZC@1224,2KVMT@206389,2VJVA@28216,COG1024@1,COG1024@2 NA|NA|NA I Belongs to the enoyl-CoA hydratase isomerase family HGDHCNMN_00473 62928.azo1178 1.3e-235 822.4 Rhodocyclales 3.1.3.16 ko:K01090,ko:K20074 ko00000,ko01000,ko01009 Bacteria 1MV1P@1224,2KY31@206389,2VH5K@28216,COG0515@1,COG0515@2,COG0631@1,COG0631@2 NA|NA|NA T Serine/threonine phosphatases, family 2C, catalytic domain HGDHCNMN_00474 62928.azo1177 6e-138 496.9 Rhodocyclales focA ko:K06212,ko:K21993 ko00000,ko02000 1.A.16.1.1,1.A.16.1.3,1.A.16.2 Bacteria 1MU0W@1224,2KX8T@206389,2VKMF@28216,COG2116@1,COG2116@2 NA|NA|NA P Formate/nitrite transporter HGDHCNMN_00475 1286631.X805_37470 6.3e-41 173.3 unclassified Burkholderiales nirD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0008150,GO:0008152,GO:0008942,GO:0009061,GO:0009344,GO:0009987,GO:0015980,GO:0016491,GO:0016661,GO:0032991,GO:0044237,GO:0044424,GO:0044464,GO:0045333,GO:0046857,GO:0055114,GO:0098809 1.7.1.15 ko:K00362,ko:K00363,ko:K05710 ko00360,ko00910,ko01120,ko01220,map00360,map00910,map01120,map01220 M00530,M00545 R00787,R06782,R06783 RC00098,RC00176 br01602,ko00000,ko00001,ko00002,ko01000 iEC55989_1330.EC55989_3772 Bacteria 1KMGC@119065,1MZBY@1224,2VUZ7@28216,COG2146@1,COG2146@2 NA|NA|NA P Rieske-like [2Fe-2S] domain HGDHCNMN_00476 62928.azo1175 0.0 1477.2 Rhodocyclales nirB 1.7.1.15 ko:K00362 ko00910,ko01120,map00910,map01120 M00530 R00787 RC00176 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW58@1224,2KUZ3@206389,2VN2R@28216,COG1251@1,COG1251@2 NA|NA|NA C Nitrite and sulphite reductase 4Fe-4S domain HGDHCNMN_00477 497321.C664_03330 5.1e-44 184.1 Rhodocyclales Bacteria 1N4G2@1224,2CZS8@1,2KWYM@206389,2VUSW@28216,32T71@2 NA|NA|NA HGDHCNMN_00479 1192034.CAP_5865 2.7e-42 179.1 Deltaproteobacteria Bacteria 1NF7B@1224,2WWBC@28221,431P3@68525,COG0739@1,COG0739@2,COG3409@1,COG3409@2 NA|NA|NA M Peptidase family M23 HGDHCNMN_00480 497321.C664_09680 3e-149 534.6 Rhodocyclales pckG GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0007028,GO:0007154,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009267,GO:0009410,GO:0009605,GO:0009607,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010106,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016020,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019725,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030003,GO:0030145,GO:0030154,GO:0030312,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031668,GO:0031669,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033554,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042592,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0046916,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050792,GO:0050794,GO:0050801,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071496,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0071944,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0075136,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:0098771,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32,4.1.1.49 ko:K01596,ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko03320,ko04068,ko04151,ko04152,ko04910,ko04920,ko04922,ko04931,ko04964,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200,map03320,map04068,map04151,map04152,map04910,map04920,map04922,map04931,map04964 M00003,M00170 R00341,R00431,R00726 RC00002,RC02741 ko00000,ko00001,ko00002,ko01000 Bacteria 1MX3C@1224,2KV5X@206389,2VINZ@28216,COG1274@1,COG1274@2 NA|NA|NA H Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle HGDHCNMN_00481 497321.C664_09685 0.0 1279.6 Rhodocyclales maeB GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 ko:K00027,ko:K00029,ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,ko02020,map00430,map00620,map00640,map00680,map00710,map00720,map01100,map01120,map01200,map02020 M00169,M00172,M00357,M00579 R00214,R00216,R00230,R00921 RC00004,RC00105,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1637 Bacteria 1MU0A@1224,2KVTV@206389,2VIYB@28216,COG0280@1,COG0280@2,COG0281@1,COG0281@2 NA|NA|NA C Malic enzyme HGDHCNMN_00482 62928.azo0822 3.8e-146 524.6 Rhodocyclales ko:K07001 ko00000 Bacteria 1PIHH@1224,2KUYE@206389,2VHKX@28216,COG1752@1,COG1752@2 NA|NA|NA S esterase of the alpha-beta hydrolase superfamily HGDHCNMN_00483 1123487.KB892846_gene579 3.4e-88 332.0 Rhodocyclales pbpG GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.16.4 ko:K07258,ko:K07262 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria 1MWZA@1224,2KUX8@206389,2VH1S@28216,COG1686@1,COG1686@2 NA|NA|NA M Belongs to the peptidase S11 family HGDHCNMN_00484 62928.azo0824 1.6e-110 405.6 Rhodocyclales yiaJ ko:K13641 ko00000,ko03000 Bacteria 1MUNW@1224,2KUMZ@206389,2VHB6@28216,COG1414@1,COG1414@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_00485 62928.azo0107 9e-109 399.8 Betaproteobacteria yhhQ ko:K09125 ko00000 Bacteria 1NIPE@1224,2VH6D@28216,COG1738@1,COG1738@2 NA|NA|NA S Involved in the import of queuosine (Q) precursors, required for Q precursor salvage HGDHCNMN_00486 1304883.KI912532_gene3109 1.8e-117 429.1 Rhodocyclales Bacteria 1NAP4@1224,2KVPS@206389,2VNQT@28216,COG0370@1,COG0370@2 NA|NA|NA P Transporter of a GTP-driven Fe(2 ) uptake system HGDHCNMN_00487 305700.B447_07132 1.2e-84 319.7 Rhodocyclales lrgB Bacteria 1MV81@1224,2KVYR@206389,2VH4N@28216,COG1346@1,COG1346@2 NA|NA|NA M of murein hydrolase HGDHCNMN_00488 62928.azo1155 3.2e-27 127.9 Rhodocyclales lrgA GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009056,GO:0009057,GO:0009253,GO:0015031,GO:0015833,GO:0016020,GO:0030203,GO:0033036,GO:0042886,GO:0043170,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 ko:K05338,ko:K06518 ko02020,map02020 ko00000,ko00001,ko02000 1.E.14.1,1.E.14.2 Bacteria 1N753@1224,2KX00@206389,2VTZY@28216,COG1380@1,COG1380@2 NA|NA|NA S effector of murein hydrolase LrgA HGDHCNMN_00489 748247.AZKH_1013 8e-186 656.4 Rhodocyclales Bacteria 1MVMD@1224,2KURQ@206389,2VH1J@28216,COG4663@1,COG4663@2 NA|NA|NA C Part of the tripartite ATP-independent periplasmic (TRAP) transport system HGDHCNMN_00490 748247.AZKH_1013 4.7e-170 604.0 Rhodocyclales Bacteria 1MVMD@1224,2KURQ@206389,2VH1J@28216,COG4663@1,COG4663@2 NA|NA|NA C Part of the tripartite ATP-independent periplasmic (TRAP) transport system HGDHCNMN_00491 748247.AZKH_1014 3.7e-185 654.4 Rhodocyclales pmbA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564 ko:K03592 ko00000,ko01002 Bacteria 1MUVW@1224,2KUV1@206389,2VHJ4@28216,COG0312@1,COG0312@2 NA|NA|NA S modulator of DNA gyrase HGDHCNMN_00492 62928.azo2793 1.8e-48 199.1 Rhodocyclales yjgA ko:K09889 ko00000,ko03009 Bacteria 1MZ4R@1224,2KWJZ@206389,2VSGZ@28216,COG3028@1,COG3028@2 NA|NA|NA S Belongs to the UPF0307 family HGDHCNMN_00493 1304883.KI912532_gene1396 2.8e-81 308.1 Rhodocyclales mog GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0032324,GO:0034641,GO:0042278,GO:0042802,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.7.7.75,2.8.1.12 ko:K03635,ko:K03831 ko00790,ko01100,ko04122,map00790,map01100,map04122 R09395,R09726 RC00002,RC02507 ko00000,ko00001,ko01000 iAPECO1_1312.APECO1_1969,iECABU_c1320.ECABU_c00100,iECED1_1282.ECED1_0009,iECNA114_1301.ECNA114_4653,iECP_1309.ECP_0010,iECS88_1305.ECS88_0010,iECSF_1327.ECSF_0009,iECUMN_1333.ECUMN_0010,iEcSMS35_1347.EcSMS35_0008,iLF82_1304.LF82_1379,iNRG857_1313.NRG857_00050,iUMN146_1321.UM146_22820 Bacteria 1R9W2@1224,2KUQ0@206389,2VH28@28216,COG0521@1,COG0521@2 NA|NA|NA H Molybdenum cofactor biosynthesis protein HGDHCNMN_00494 497321.C664_13012 2e-53 215.7 Rhodocyclales ysdA ko:K03704 ko00000,ko03000 Bacteria 1N6YM@1224,2KX2F@206389,2VQXP@28216,COG1278@1,COG1278@2,COG3326@1,COG3326@2 NA|NA|NA K Protein of unknown function (DUF1294) HGDHCNMN_00495 62928.azo2791 3.9e-82 311.2 Rhodocyclales msrQ ko:K17247 ko00000 Bacteria 1RDUP@1224,2KW1M@206389,2VRBQ@28216,COG2717@1,COG2717@2 NA|NA|NA C Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain HGDHCNMN_00496 62928.azo2790 3e-79 301.2 Rhodocyclales msrP ko:K07147 ko00000,ko01000 Bacteria 1MUW0@1224,2KV6B@206389,2VH08@28216,COG2041@1,COG2041@2 NA|NA|NA C Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide HGDHCNMN_00498 76114.ebA3981 6.6e-110 403.7 Rhodocyclales fmt2 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 Bacteria 1MU6N@1224,2KUFM@206389,2VK4I@28216,COG1611@1,COG1611@2 NA|NA|NA S Belongs to the LOG family HGDHCNMN_00499 748247.AZKH_0588 2.4e-27 128.3 Rhodocyclales Bacteria 1N98H@1224,2C1YJ@1,2KXDS@206389,2VVT5@28216,32ZXK@2 NA|NA|NA S Protein of unknown function (DUF2782) HGDHCNMN_00500 267608.RSc3362 3.4e-10 72.4 Burkholderiaceae ko:K07126 ko00000 Bacteria 1K61P@119060,1N3Q8@1224,2VXFI@28216,COG0790@1,COG0790@2 NA|NA|NA S Sel1-like repeats. HGDHCNMN_00501 859657.RPSI07_0078 9.2e-297 1025.8 Burkholderiaceae cpdB 3.1.3.6,3.1.4.16 ko:K01119 ko00230,ko00240,map00230,map00240 R01562,R01877,R02148,R02370,R03537,R03538,R03929,R05135 RC00078,RC00296 ko00000,ko00001,ko01000 Bacteria 1K3SN@119060,1MU11@1224,2VJC2@28216,COG0737@1,COG0737@2 NA|NA|NA F Belongs to the 5'-nucleotidase family HGDHCNMN_00502 748247.AZKH_4452 1.5e-165 589.7 Rhodocyclales sppA ko:K04773 ko00000,ko01000,ko01002 Bacteria 1MUXE@1224,2KVMS@206389,2VH94@28216,COG0616@1,COG0616@2 NA|NA|NA OU signal peptide peptidase HGDHCNMN_00503 580332.Slit_0149 3.7e-43 181.0 Nitrosomonadales yccU GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06929 ko00000 Bacteria 1N03D@1224,2VU9G@28216,44WH5@713636,COG1832@1,COG1832@2 NA|NA|NA S SMART CoA-binding domain protein HGDHCNMN_00504 497321.C664_18609 7.3e-123 446.8 Rhodocyclales dapF GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00527 R02735 RC00302 ko00000,ko00001,ko00002,ko01000 iECED1_1282.ECED1_4494 Bacteria 1MWDH@1224,2KV20@206389,2VI0C@28216,COG0253@1,COG0253@2 NA|NA|NA E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan HGDHCNMN_00505 748247.AZKH_0553 1.3e-71 276.2 Rhodocyclales yigA ko:K09921 ko00000 Bacteria 1R4BP@1224,2KV4A@206389,2VPN6@28216,COG3159@1,COG3159@2 NA|NA|NA S Protein of unknown function, DUF484 HGDHCNMN_00506 497321.C664_03325 8.3e-189 666.4 Rhodocyclales rlmI GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.191 ko:K06969 ko00000,ko01000,ko03009 Bacteria 1MUGB@1224,2KUS1@206389,2VKNG@28216,COG1092@1,COG1092@2 NA|NA|NA J Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase HGDHCNMN_00507 76114.ebA3954 9.8e-20 103.6 Rhodocyclales dmpM ko:K02624 ko00000,ko03000 Bacteria 1NMZV@1224,2KYSE@206389,2VYEZ@28216,COG1414@1,COG1414@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_00508 1123367.C666_04080 8.1e-167 593.2 Rhodocyclales ruvB GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 3.6.4.12 ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MU38@1224,2KUCP@206389,2VH0J@28216,COG2255@1,COG2255@2 NA|NA|NA L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing HGDHCNMN_00509 1121035.AUCH01000008_gene1052 3.1e-102 378.6 Rhodocyclales ydiK GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 Bacteria 1MVX7@1224,2KW9W@206389,2VIIX@28216,COG0628@1,COG0628@2 NA|NA|NA S AI-2E family transporter HGDHCNMN_00510 378806.STAUR_7710 8.7e-126 458.4 Myxococcales 3.1.4.53 ko:K03651 ko00230,ko02025,map00230,map02025 R00191 RC00296 ko00000,ko00001,ko01000 Bacteria 1NSXS@1224,2X480@28221,2YYG3@29,4392B@68525,COG0457@1,COG0457@2,COG1409@1,COG1409@2,COG3903@1,COG3903@2 NA|NA|NA K Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes HGDHCNMN_00511 1123487.KB892834_gene2610 2.6e-56 224.9 Rhodocyclales Bacteria 1RH0Z@1224,2KZ26@206389,2VT69@28216,COG2050@1,COG2050@2 NA|NA|NA Q Domain of unknown function (DUF4442) HGDHCNMN_00512 748247.AZKH_0570 1.5e-77 295.8 Rhodocyclales ruvA GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MWJR@1224,2KW2M@206389,2VJ98@28216,COG0632@1,COG0632@2 NA|NA|NA L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB HGDHCNMN_00513 342113.DM82_780 8.1e-55 220.3 Burkholderiaceae 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 Bacteria 1K4M5@119060,1NUET@1224,2VKA7@28216,COG0625@1,COG0625@2 NA|NA|NA O Glutathione S-transferase HGDHCNMN_00514 1120999.JONM01000023_gene3148 2.9e-14 84.7 Betaproteobacteria Bacteria 1PAYY@1224,295Y2@1,2W50E@28216,2ZT8X@2 NA|NA|NA HGDHCNMN_00515 1123487.KB892834_gene2608 2.7e-51 208.8 Rhodocyclales 3.1.3.96 ko:K17623 R11180 RC00017 ko00000,ko01000,ko01009 Bacteria 1PUMZ@1224,2KXJ9@206389,2VHJ3@28216,COG0637@1,COG0637@2 NA|NA|NA S Haloacid dehalogenase-like hydrolase HGDHCNMN_00516 748247.AZKH_0571 7.9e-113 413.7 Rhodocyclales menA 2.5.1.74 ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R05617,R06858,R10757 RC02935,RC02936,RC03264 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 1MXQQ@1224,2KVGA@206389,2VJX1@28216,COG1575@1,COG1575@2 NA|NA|NA H COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase HGDHCNMN_00517 497321.C664_09620 1.5e-107 397.5 Betaproteobacteria ko:K21000 ko02025,map02025 ko00000,ko00001 GH39 Bacteria 1QUYG@1224,2VMBF@28216,COG3307@1,COG3307@2,COG5652@1,COG5652@2 NA|NA|NA M -O-antigen HGDHCNMN_00518 62928.azo3245 1.1e-113 416.8 Rhodocyclales Bacteria 1R5QH@1224,2KVT0@206389,2VMF9@28216,COG3420@1,COG3420@2 NA|NA|NA P alginic acid biosynthetic process HGDHCNMN_00519 640081.Dsui_1873 3.3e-48 198.4 Rhodocyclales acrR ko:K03577,ko:K18135 ko01501,map01501 M00647 ko00000,ko00001,ko00002,ko03000 Bacteria 1N659@1224,2KX9V@206389,2VS47@28216,COG1309@1,COG1309@2 NA|NA|NA K MAATS-type transcriptional repressor, C-terminal region HGDHCNMN_00520 1304883.KI912532_gene2139 7.4e-108 397.5 Rhodocyclales cmeA ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 Bacteria 1MU78@1224,2KVSS@206389,2VINC@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family HGDHCNMN_00521 1000565.METUNv1_02119 0.0 1431.0 Rhodocyclales ko:K03296,ko:K18138 ko01501,ko01503,map01501,map01503 M00647,M00699,M00718 ko00000,ko00001,ko00002,ko01504,ko02000 2.A.6.2 Bacteria 1MU48@1224,2KUKW@206389,2VHFI@28216,COG0841@1,COG0841@2 NA|NA|NA V AcrB/AcrD/AcrF family HGDHCNMN_00522 640081.Dsui_1870 2.9e-124 452.2 Rhodocyclales ko:K18139 ko01501,ko02024,map01501,map02024 M00642,M00643,M00647,M00718,M00768,M00822 ko00000,ko00001,ko00002,ko01504,ko02000 1.B.17,2.A.6.2 Bacteria 1MUA8@1224,2KVEZ@206389,2VI5V@28216,COG1538@1,COG1538@2 NA|NA|NA M Outer membrane efflux protein HGDHCNMN_00523 85643.Tmz1t_0302 1.4e-33 149.4 Betaproteobacteria Bacteria 1NDJ3@1224,2E9TA@1,2VWXX@28216,333ZD@2 NA|NA|NA HGDHCNMN_00524 1134474.O59_000934 1.5e-90 339.7 Gammaproteobacteria lpqC ko:K03932 ko00000 CE1 Bacteria 1N6M6@1224,1S6C7@1236,COG3509@1,COG3509@2 NA|NA|NA Q Esterase PHB depolymerase HGDHCNMN_00525 395492.Rleg2_1811 4e-127 461.1 Rhizobiaceae nodD2 Bacteria 1N663@1224,2TU9J@28211,4B9F0@82115,COG0583@1,COG0583@2 NA|NA|NA K transcriptional regulator HGDHCNMN_00526 1380394.JADL01000003_gene5135 1.1e-142 513.5 Rhodospirillales stp_1 Bacteria 1QUAS@1224,2JYUT@204441,2TWE2@28211,COG0477@1,COG2814@2 NA|NA|NA EGP Transmembrane secretion effector HGDHCNMN_00527 443598.AUFA01000037_gene5139 2.2e-11 77.0 Bradyrhizobiaceae 3.1.3.8 ko:K01083,ko:K15125 ko00562,ko05133,map00562,map05133 R03371 RC00078 ko00000,ko00001,ko00536,ko01000 Bacteria 1MU7T@1224,2VFDK@28211,3K6F2@41294,COG2931@1,COG2931@2,COG3210@1,COG3210@2,COG3391@1,COG3391@2,COG4932@1,COG4932@2 NA|NA|NA Q COG2931, RTX toxins and related Ca2 -binding proteins HGDHCNMN_00528 929562.Emtol_0826 2.3e-100 372.9 Cytophagia 1.8.5.4 ko:K17218 ko00920,map00920 R10152 RC03155 ko00000,ko00001,ko01000 Bacteria 47N6I@768503,4NEK6@976,COG0446@1,COG0446@2 NA|NA|NA S Pyridine nucleotide-disulphide oxidoreductase HGDHCNMN_00529 1286631.X805_20020 3.4e-26 124.0 unclassified Burkholderiales Bacteria 1KMQF@119065,1N7YT@1224,2VVZM@28216,COG5591@1,COG5591@2 NA|NA|NA S Peptidase propeptide and YPEB domain HGDHCNMN_00530 85643.Tmz1t_1933 3.3e-68 264.6 Rhodocyclales Bacteria 1RB03@1224,2KWNC@206389,2VUDN@28216,COG3658@1,COG3658@2 NA|NA|NA C Cytochrome b/b6/petB HGDHCNMN_00531 85643.Tmz1t_1912 5.8e-25 120.2 Rhodocyclales Bacteria 1NHDB@1224,2KX5T@206389,2VWE0@28216,COG3212@1,COG3212@2 NA|NA|NA S Propeptide PepSY amd peptidase M4 HGDHCNMN_00532 85643.Tmz1t_1913 2.9e-98 364.8 Rhodocyclales Bacteria 1N0YI@1224,2KZRU@206389,2W22R@28216,COG0745@1,COG0745@2 NA|NA|NA K Two component transcriptional regulator HGDHCNMN_00533 85643.Tmz1t_1914 8.7e-150 537.0 Rhodocyclales 2.7.13.3 ko:K07649,ko:K07653,ko:K18351 ko01502,ko02020,map01502,map02020 M00457,M00460,M00651,M00658 ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 Bacteria 1MX6R@1224,2KUZ6@206389,2VIZI@28216,COG0642@1,COG0642@2 NA|NA|NA T COG0642 Signal transduction histidine kinase HGDHCNMN_00534 1117958.PE143B_0105275 3.5e-89 335.1 Gammaproteobacteria GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1MVMI@1224,1RXZ6@1236,COG1305@1,COG1305@2 NA|NA|NA E Transglutaminase HGDHCNMN_00535 640081.Dsui_3230 6.2e-258 897.1 Rhodocyclales MA20_16190 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1MX5P@1224,2KUBA@206389,2VJEU@28216,COG2307@1,COG2307@2,COG2308@1,COG2308@2 NA|NA|NA S Circularly permuted ATP-grasp type 2 HGDHCNMN_00536 62928.azo1604 0.0 1750.3 Rhodocyclales MA20_16195 GO:0003674,GO:0005198,GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0030115,GO:0030312,GO:0044464,GO:0045229,GO:0071840,GO:0071944 Bacteria 1MVAG@1224,2KV93@206389,2VKKZ@28216,COG1305@1,COG1305@2,COG4196@1,COG4196@2 NA|NA|NA E Putative amidoligase enzyme (DUF2126) HGDHCNMN_00537 640081.Dsui_0644 1.4e-229 802.4 Rhodocyclales alkK ko:K00666 ko00000,ko01000,ko01004 Bacteria 1MUMC@1224,2KV0T@206389,2VGZE@28216,COG0318@1,COG0318@2 NA|NA|NA IQ AMP-binding enzyme HGDHCNMN_00538 748247.AZKH_1410 2.4e-29 134.8 Rhodocyclales Bacteria 1RIEZ@1224,2KWR0@206389,2VTF6@28216,COG1403@1,COG1403@2 NA|NA|NA V HNH endonuclease HGDHCNMN_00539 196367.JNFG01000090_gene3771 1.9e-31 142.1 Burkholderiaceae ko:K07481 ko00000 Bacteria 1K1CT@119060,1MVTU@1224,2VK8B@28216,COG3039@1,COG3039@2 NA|NA|NA L COG Transposase and inactivated derivatives, IS5 family HGDHCNMN_00540 1304883.KI912532_gene1036 7.6e-34 151.0 Rhodocyclales hupK Bacteria 1R6ND@1224,2KXDB@206389,2VQXM@28216,COG0374@1,COG0374@2 NA|NA|NA C Ni,Fe-hydrogenase I large subunit HGDHCNMN_00541 1121035.AUCH01000003_gene1267 3e-20 105.1 Rhodocyclales rubA GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0008199,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114 Bacteria 1N813@1224,2KXFP@206389,2VUNU@28216,COG1773@1,COG1773@2 NA|NA|NA C [NiFe]-hydrogenase assembly, chaperone, HybE HGDHCNMN_00542 1121035.AUCH01000003_gene1266 1.5e-24 118.2 Rhodocyclales rubA GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0008199,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114 Bacteria 1N6TQ@1224,2KXEW@206389,2VWD0@28216,COG1773@1,COG1773@2 NA|NA|NA C Rubredoxin HGDHCNMN_00543 1121035.AUCH01000003_gene1265 3.4e-83 315.1 Rhodocyclales rubA GO:0000302,GO:0003674,GO:0003824,GO:0004601,GO:0005488,GO:0005506,GO:0006091,GO:0006950,GO:0006970,GO:0006979,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009266,GO:0009268,GO:0009408,GO:0009409,GO:0009628,GO:0009636,GO:0009651,GO:0009987,GO:0010035,GO:0010446,GO:0016209,GO:0016491,GO:0016684,GO:0016692,GO:0016999,GO:0017001,GO:0017144,GO:0022900,GO:0033554,GO:0034599,GO:0034605,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0043167,GO:0043169,GO:0044237,GO:0044248,GO:0046677,GO:0046872,GO:0046914,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070417,GO:0070482,GO:0070887,GO:0071214,GO:0071236,GO:0071453,GO:0071467,GO:0071469,GO:0071470,GO:0071472,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:0104004,GO:1901700,GO:1901701,GO:1990748 ko:K03618 ko00000 Bacteria 1MV2U@1224,2KWD5@206389,2VKNQ@28216,COG1773@1,COG1773@2 NA|NA|NA C HupH hydrogenase expression protein, C-terminal conserved region HGDHCNMN_00544 159087.Daro_3984 5.2e-22 110.9 Rhodocyclales hoxO ko:K03619,ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Bacteria 1RJ41@1224,2KXAE@206389,2VSQM@28216,COG0526@1,COG0526@2 NA|NA|NA CO Hydrogenase-1 expression protein HyaE HGDHCNMN_00545 1485545.JQLW01000005_gene927 6.5e-21 106.7 Proteobacteria hybG ko:K03605,ko:K03618,ko:K04653 ko00000,ko01000,ko01002 Bacteria 1N9Z3@1224,COG0298@1,COG0298@2 NA|NA|NA O Hydrogenase expression formation protein (HUPF HGDHCNMN_00546 1121035.AUCH01000003_gene1262 1e-73 283.1 Rhodocyclales hupD GO:0003674,GO:0003824,GO:0004175,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 ko:K03605 ko00000,ko01000,ko01002 Bacteria 1RE1C@1224,2KWD1@206389,2VJ4W@28216,COG0680@1,COG0680@2 NA|NA|NA C Hydrogenase maturation protease HGDHCNMN_00547 313589.JNB_03820 1.5e-201 710.7 Actinobacteria Bacteria 28PWR@1,2H37T@201174,2ZCGZ@2 NA|NA|NA HGDHCNMN_00548 1348657.M622_00020 8.8e-172 609.8 Rhodocyclales dgt GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 ko:K01129 ko00230,map00230 R01856 RC00017 ko00000,ko00001,ko01000 Bacteria 1MVQ2@1224,2KVNM@206389,2VI7B@28216,COG0232@1,COG0232@2 NA|NA|NA F Belongs to the dGTPase family. Type 2 subfamily HGDHCNMN_00549 76114.ebA2256 1.4e-147 529.3 Rhodocyclales aroB GO:0000166,GO:0003674,GO:0003824,GO:0003856,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0051287,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.71,4.2.3.4 ko:K01735,ko:K13829 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412,R03083 RC00002,RC00078,RC00847 ko00000,ko00001,ko00002,ko01000 iAF1260.b3389,iBWG_1329.BWG_3080,iECDH10B_1368.ECDH10B_3564,iECDH1ME8569_1439.ECDH1ME8569_3268,iECNA114_1301.ECNA114_3486,iEcDH1_1363.EcDH1_0324,iIT341.HP0283,iJO1366.b3389,iJR904.b3389,iY75_1357.Y75_RS20275 Bacteria 1MUBK@1224,2KURZ@206389,2VHXR@28216,COG0337@1,COG0337@2 NA|NA|NA E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) HGDHCNMN_00550 62928.azo3645 1.2e-62 246.1 Rhodocyclales aroK 2.7.1.71,4.2.3.4 ko:K00891,ko:K13829,ko:K15546 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412,R03083 RC00002,RC00078,RC00847 ko00000,ko00001,ko00002,ko01000,ko03000 Bacteria 1MUFJ@1224,2KWHZ@206389,2VRDN@28216,COG0703@1,COG0703@2 NA|NA|NA F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate HGDHCNMN_00551 443144.GM21_2663 4.3e-60 239.6 Deltaproteobacteria ko:K20276 ko02024,map02024 ko00000,ko00001 Bacteria 1MWWH@1224,2WT70@28221,42WWV@68525,COG2831@1,COG2831@2 NA|NA|NA U PFAM Ig domain protein, group 1 domain protein HGDHCNMN_00552 1123487.KB892868_gene1229 9.5e-239 833.2 Rhodocyclales pilQ GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 ko:K02507,ko:K02666 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1QTT6@1224,2KUHK@206389,2VHY4@28216,COG4796@1,COG4796@2 NA|NA|NA U Type 4 fimbrial biogenesis protein HGDHCNMN_00553 62928.azo3647 1.1e-44 186.4 Rhodocyclales pilP ko:K02664,ko:K02665 ko00000,ko02035,ko02044 Bacteria 1RI6V@1224,2KWK4@206389,2VSVR@28216,COG3168@1,COG3168@2 NA|NA|NA NU pilus assembly protein PilP HGDHCNMN_00554 76114.ebA2264 1.7e-74 285.8 Rhodocyclales pilO ko:K02664 ko00000,ko02035,ko02044 Bacteria 1RBGW@1224,2KW2A@206389,2VH68@28216,COG3167@1,COG3167@2 NA|NA|NA NU Pilus assembly protein PilO HGDHCNMN_00555 62928.azo3649 3.5e-58 231.5 Rhodocyclales pilN ko:K02663 ko00000,ko02035,ko02044 Bacteria 1RF1S@1224,2KWD2@206389,2VN9T@28216,COG3166@1,COG3166@2 NA|NA|NA NU fimbrial biogenesis protein PilN HGDHCNMN_00556 748247.AZKH_4221 5.4e-94 350.9 Rhodocyclales pilM ko:K02662 ko00000,ko02035,ko02044 Bacteria 1MX8P@1224,2KV8N@206389,2VH6W@28216,COG4972@1,COG4972@2 NA|NA|NA NU Pilus assembly protein HGDHCNMN_00557 243231.GSU0959 1.9e-112 412.1 Proteobacteria Bacteria 1R5X5@1224,28J8W@1,2Z941@2 NA|NA|NA HGDHCNMN_00559 640081.Dsui_3124 6.4e-21 107.1 Bacteria ko:K03413 ko02020,ko02030,map02020,map02030 M00506 ko00000,ko00001,ko00002,ko02022,ko02035 Bacteria COG2204@1,COG2204@2 NA|NA|NA T phosphorelay signal transduction system HGDHCNMN_00560 159087.Daro_0233 3.6e-283 980.3 Rhodocyclales gpmI 5.4.2.12 ko:K15633 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUQ1@1224,2KVH2@206389,2VMTN@28216,COG0696@1,COG0696@2 NA|NA|NA G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate HGDHCNMN_00561 497321.C664_13779 1.3e-95 356.3 Rhodocyclales Bacteria 1RB8U@1224,28P0I@1,2KW9E@206389,2VQ6K@28216,2ZBX5@2 NA|NA|NA S Protein of unknown function (DUF3025) HGDHCNMN_00562 1123367.C666_14710 5.2e-35 154.1 Rhodocyclales Bacteria 1N7QI@1224,2CJFN@1,2KX8A@206389,2VX2C@28216,32ZIB@2 NA|NA|NA HGDHCNMN_00563 748247.AZKH_3737 6.4e-153 547.0 Rhodocyclales pyrC GO:0003674,GO:0003824,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUYP@1224,2KVK1@206389,2VH6F@28216,COG0418@1,COG0418@2 NA|NA|NA F Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate HGDHCNMN_00564 76114.ebA1457 3.1e-100 371.7 Rhodocyclales rsmI GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 ko:K07056 ko00000,ko01000,ko03009 Bacteria 1MU0E@1224,2KVEN@206389,2VHI1@28216,COG0313@1,COG0313@2 NA|NA|NA H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA HGDHCNMN_00565 1123367.C666_14725 3.9e-36 157.5 Rhodocyclales yraN ko:K07460 ko00000 Bacteria 1N6VN@1224,2KX35@206389,2VU20@28216,COG0792@1,COG0792@2 NA|NA|NA L Belongs to the UPF0102 family HGDHCNMN_00566 640081.Dsui_0253 3.5e-32 144.4 Rhodocyclales WQ51_03175 Bacteria 1N2XU@1224,2DMN0@1,2KWXP@206389,2VUWF@28216,32SKB@2 NA|NA|NA S HIRAN HGDHCNMN_00567 62928.azo0870 4.4e-90 337.4 Rhodocyclales gmhA GO:0003674,GO:0005488,GO:0005515,GO:0006275,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010556,GO:0010557,GO:0010604,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032298,GO:0042802,GO:0045740,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0060255,GO:0065007,GO:0080090,GO:0090329,GO:2000105,GO:2000112 2.7.1.167,2.7.1.33,2.7.7.70,5.3.1.28 ko:K03271,ko:K03272,ko:K03525,ko:K12961 ko00540,ko00770,ko01100,map00540,map00770,map01100 M00064,M00120 R02971,R03018,R04391,R05644,R05645,R05646,R09768,R09769 RC00002,RC00017,RC00078,RC00434 ko00000,ko00001,ko00002,ko01000,ko01005,ko03036 Bacteria 1NJ8X@1224,2KVWJ@206389,2VN12@28216,COG0279@1,COG0279@2 NA|NA|NA G Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate HGDHCNMN_00568 76114.ebA1464 1.1e-57 229.9 Rhodocyclales Bacteria 1MUZ2@1224,2KWEB@206389,2VQIS@28216,COG2823@1,COG2823@2 NA|NA|NA S periplasmic or secreted lipoprotein HGDHCNMN_00569 395494.Galf_1749 4.5e-23 114.4 Nitrosomonadales Bacteria 1RKU4@1224,2E0GC@1,2WCSX@28216,32W2D@2,44WM8@713636 NA|NA|NA HGDHCNMN_00570 1244869.H261_16341 1.5e-30 139.8 Rhodospirillales 2.7.13.3 ko:K11527 ko00000,ko01000,ko01001,ko02022 Bacteria 1NRP8@1224,2JPEA@204441,2TXJ2@28211,COG0642@1,COG0784@1,COG0784@2,COG2198@1,COG2198@2,COG2202@1,COG2202@2,COG2205@2,COG2770@1,COG2770@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_00571 1000565.METUNv1_02982 4.7e-136 491.9 Rhodocyclales pkn2 2.7.11.1 ko:K08884 ko00000,ko01000,ko01001 Bacteria 1PJRR@1224,2KWHB@206389,2VHAU@28216,COG0515@1,COG0515@2,COG2114@1,COG2114@2 NA|NA|NA KLT Protein kinase domain HGDHCNMN_00572 1000565.METUNv1_02983 9.7e-102 376.7 Betaproteobacteria mcp64H-2 ko:K02660,ko:K03406,ko:K11525 ko02020,ko02025,ko02030,map02020,map02025,map02030 ko00000,ko00001,ko02035,ko02044 Bacteria 1QYRK@1224,2WHJ2@28216,COG2972@1,COG2972@2 NA|NA|NA T Protein of unknown function (DUF3365) HGDHCNMN_00573 640081.Dsui_3388 5.3e-168 597.4 Rhodocyclales Bacteria 1PUZK@1224,2KYH0@206389,2VKEF@28216,COG1055@1,COG1055@2 NA|NA|NA P Involved in arsenical resistance. Thought to form the channel of an arsenite pump HGDHCNMN_00574 85643.Tmz1t_0572 2.2e-276 958.0 Rhodocyclales kup GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 ko:K03549 ko00000,ko02000 2.A.72 Bacteria 1MUVH@1224,2KUQJ@206389,2VH9I@28216,COG3158@1,COG3158@2 NA|NA|NA P Transport of potassium into the cell HGDHCNMN_00575 1532557.JL37_29610 6.4e-191 673.7 Alcaligenaceae Bacteria 1MV6F@1224,2VGZY@28216,3T22T@506,COG1167@1,COG1167@2 NA|NA|NA K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs HGDHCNMN_00576 381666.H16_A0971 3.2e-09 68.2 Burkholderiaceae Bacteria 1KE8A@119060,1NZI1@1224,295UE@1,2W3C3@28216,34314@2 NA|NA|NA HGDHCNMN_00579 62928.azo3315 3.4e-72 278.5 Rhodocyclales sdh Bacteria 1R735@1224,2KW32@206389,2VH63@28216,COG0300@1,COG0300@2 NA|NA|NA S Belongs to the short-chain dehydrogenases reductases (SDR) family HGDHCNMN_00580 497321.C664_16013 5.1e-117 427.6 Rhodocyclales gluQ GO:0000166,GO:0002097,GO:0003674,GO:0005488,GO:0005524,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 ko:K01894 ko00000,ko01000,ko01007,ko03016 Bacteria 1MUN7@1224,2KV7X@206389,2VHYK@28216,COG0008@1,COG0008@2 NA|NA|NA J Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon HGDHCNMN_00581 614083.AWQR01000055_gene1987 2e-51 210.7 Comamonadaceae Bacteria 1MU2C@1224,2VH3V@28216,4A9PA@80864,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase HGDHCNMN_00582 62928.azo2788 1e-172 612.8 Rhodocyclales aroG GO:0003674,GO:0003824,GO:0003849,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.54 ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 M00022 R01826 RC00435 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_0684,iECSF_1327.ECSF_0680,iEcSMS35_1347.EcSMS35_0777,iLF82_1304.LF82_0146,iNRG857_1313.NRG857_03335,iYL1228.KPN_00758 Bacteria 1MU5Q@1224,2KU9M@206389,2VH4W@28216,COG0722@1,COG0722@2 NA|NA|NA E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) HGDHCNMN_00583 497321.C664_10148 4.9e-112 411.0 Rhodocyclales splB Bacteria 1MW0H@1224,2KUH2@206389,2VIYE@28216,COG1533@1,COG1533@2 NA|NA|NA L Elongator protein 3, MiaB family, Radical SAM HGDHCNMN_00584 1304883.KI912532_gene547 7.6e-50 204.1 Rhodocyclales Bacteria 1NC9X@1224,2KZWN@206389,2WGIN@28216,COG0642@1,COG0642@2,COG0784@1,COG0784@2 NA|NA|NA T Histidine Phosphotransfer domain HGDHCNMN_00585 640081.Dsui_0536 5.6e-83 315.1 Rhodocyclales ko:K07212,ko:K07216 ko00000 Bacteria 1RCM9@1224,2KVY4@206389,2VJGE@28216,COG2703@1,COG2703@2,COG4191@1,COG4191@2 NA|NA|NA PT Hemerythrin HHE cation binding domain HGDHCNMN_00586 1454004.AW11_02684 1.9e-126 458.8 unclassified Betaproteobacteria htpX ko:K03799 M00743 ko00000,ko00002,ko01000,ko01002 Bacteria 1KQHZ@119066,1MUV4@1224,2VIVB@28216,COG0501@1,COG0501@2 NA|NA|NA O Belongs to the peptidase M48B family HGDHCNMN_00587 748247.AZKH_0057 1.7e-120 439.1 Rhodocyclales fmt GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.1.176,2.1.2.9 ko:K00604,ko:K03500 ko00670,ko00970,map00670,map00970 R03940 RC00026,RC00165 ko00000,ko00001,ko01000,ko03009 iECABU_c1320.ECABU_c37050,iECUMN_1333.ECUMN_3761,ic_1306.c4048 Bacteria 1MU4Q@1224,2KVNV@206389,2VIS2@28216,COG0223@1,COG0223@2 NA|NA|NA J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus HGDHCNMN_00588 85643.Tmz1t_0095 6.4e-74 283.5 Rhodocyclales def GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0008463,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043021,GO:0043022,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046872,GO:0046914,GO:0071704,GO:1901564 3.5.1.88 ko:K01462 ko00000,ko01000 Bacteria 1RA2P@1224,2KW47@206389,2VQ4N@28216,COG0242@1,COG0242@2 NA|NA|NA J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions HGDHCNMN_00589 76114.ebA2958 8.9e-108 397.1 Rhodocyclales lysM Bacteria 1MUBV@1224,2KUKQ@206389,2VIZJ@28216,COG1652@1,COG1652@2 NA|NA|NA S protein containing LysM domain HGDHCNMN_00590 748247.AZKH_0054 6.8e-121 440.7 Rhodocyclales dprA ko:K04096 ko00000 Bacteria 1MVF6@1224,2KUP7@206389,2VH3W@28216,COG0758@1,COG0758@2 NA|NA|NA LU Rossmann fold nucleotide-binding protein involved in DNA uptake HGDHCNMN_00591 748247.AZKH_0053 1.9e-43 182.2 Rhodocyclales smg ko:K03747 ko00000 Bacteria 1RD5F@1224,2KWJJ@206389,2VRJF@28216,COG2922@1,COG2922@2 NA|NA|NA S Belongs to the Smg family HGDHCNMN_00592 76114.ebA2963 0.0 1384.0 Rhodocyclales topB 5.99.1.2 ko:K03169 ko00000,ko01000,ko03032 Bacteria 1MUFZ@1224,2KUMN@206389,2VHUF@28216,COG0550@1,COG0550@2 NA|NA|NA L DNA topoisomerase III HGDHCNMN_00593 1121035.AUCH01000005_gene200 1.4e-57 229.9 Bacteria Bacteria COG1639@1,COG1639@2 NA|NA|NA T HDOD domain HGDHCNMN_00594 85643.Tmz1t_1811 3.6e-16 91.7 Betaproteobacteria Bacteria 1P46K@1224,2C2IY@1,2W5FJ@28216,2ZM9A@2 NA|NA|NA HGDHCNMN_00595 1123487.KB892834_gene2838 4.1e-39 169.9 Rhodocyclales Bacteria 1QV1N@1224,2KZQJ@206389,2WGRZ@28216,COG3170@1,COG3170@2 NA|NA|NA NU Protein of unknown function (DUF1631) HGDHCNMN_00596 748247.AZKH_0039 0.0 2840.4 Rhodocyclales uvrA2 ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1MW0W@1224,2KVBJ@206389,2VI87@28216,COG0178@1,COG0178@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate HGDHCNMN_00597 1163408.UU9_00964 7.7e-87 327.4 Xanthomonadales pldA 3.1.1.32,3.1.1.4 ko:K01058 ko00564,ko00565,ko00590,ko00591,ko00592,ko01100,ko01110,map00564,map00565,map00590,map00591,map00592,map01100,map01110 R01315,R01316,R01317,R02053,R02054,R04034,R07064,R07379,R07387,R07859,R07860 RC00020,RC00037,RC00041,RC00094 ko00000,ko00001,ko01000 Bacteria 1PC8I@1224,1RMJH@1236,1X44M@135614,COG2829@1,COG2829@2 NA|NA|NA M phospholipase HGDHCNMN_00598 395495.Lcho_2109 9.3e-74 283.5 Proteobacteria ko:K02044 ko02010,map02010 M00223 ko00000,ko00001,ko00002,ko02000 3.A.1.9 Bacteria 1NAHN@1224,COG3221@1,COG3221@2 NA|NA|NA P ABC transporter, phosphonate, periplasmic substrate-binding protein HGDHCNMN_00600 1304885.AUEY01000051_gene1505 3.9e-119 434.9 Desulfobacterales ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MUIA@1224,2MJUF@213118,2WIU2@28221,43AEH@68525,COG0842@1,COG0842@2 NA|NA|NA V ABC-2 family transporter protein HGDHCNMN_00601 1304885.AUEY01000051_gene1506 2.3e-127 462.2 Desulfobacterales ko:K01992,ko:K13926 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1NG32@1224,2MMUI@213118,2WMWG@28221,43APA@68525,COG0842@1,COG0842@2 NA|NA|NA V ABC-2 family transporter protein HGDHCNMN_00602 330214.NIDE0032 7e-212 743.8 Bacteria ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria COG1131@1,COG1131@2 NA|NA|NA V ATPase activity HGDHCNMN_00603 1122604.JONR01000009_gene2466 2.7e-82 312.4 Xanthomonadales yhiI ko:K01993,ko:K02005 ko00000 Bacteria 1MXZV@1224,1S2IJ@1236,1X764@135614,COG1566@1,COG1566@2 NA|NA|NA V Biotin-lipoyl like HGDHCNMN_00604 296591.Bpro_5561 8.5e-81 307.8 Betaproteobacteria Bacteria 1R4EG@1224,2VXKM@28216,COG1538@1,COG1538@2 NA|NA|NA MU Outer membrane efflux protein HGDHCNMN_00605 1121035.AUCH01000002_gene1465 1.5e-55 222.6 Rhodocyclales ygjP ko:K07043 ko00000 Bacteria 1RDJ9@1224,2KWI3@206389,2VR4I@28216,COG1451@1,COG1451@2 NA|NA|NA S WLM domain HGDHCNMN_00606 159087.Daro_1500 1.2e-50 207.2 Betaproteobacteria comEA ko:K02237,ko:K02238 M00429 ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 Bacteria 1N2AZ@1224,2W4W8@28216,COG1555@1,COG1555@2 NA|NA|NA L Helix-hairpin-helix motif HGDHCNMN_00607 76114.ebA3964 2.7e-234 817.8 Rhodocyclales rng GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008996,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 ko:K08301 ko00000,ko01000,ko03009,ko03019 Bacteria 1MV65@1224,2KU6W@206389,2VI3N@28216,COG1530@1,COG1530@2 NA|NA|NA J ribonuclease, Rne Rng family HGDHCNMN_00608 76114.ebA3966 9.1e-67 260.0 Rhodocyclales maf GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0030312,GO:0036218,GO:0036221,GO:0042802,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0047429,GO:0071944 2.1.1.190 ko:K03215,ko:K06287 ko00000,ko01000,ko03009 Bacteria 1RH6H@1224,2KWAG@206389,2VQC3@28216,COG0424@1,COG0424@2 NA|NA|NA D Maf-like protein HGDHCNMN_00609 748247.AZKH_0582 4e-70 270.8 Rhodocyclales rlmH GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042802,GO:0042803,GO:0043021,GO:0043022,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0044877,GO:0046483,GO:0046983,GO:0070037,GO:0070038,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.177 ko:K00783 ko00000,ko01000,ko03009 Bacteria 1R9Z2@1224,2KWIS@206389,2VQ2M@28216,COG1576@1,COG1576@2 NA|NA|NA J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA HGDHCNMN_00610 76114.ebA3971 3.9e-38 164.1 Rhodocyclales rsfS GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 2.7.7.18 ko:K00969,ko:K09710 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000,ko03009 Bacteria 1MZEF@1224,2KWQI@206389,2VRRV@28216,COG0799@1,COG0799@2 NA|NA|NA J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation HGDHCNMN_00611 497321.C664_19620 2e-67 262.3 Rhodocyclales nadD GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034355,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18,3.5.4.4,3.6.1.55 ko:K00969,ko:K01488,ko:K03574 ko00230,ko00760,ko01100,ko05340,map00230,map00760,map01100,map05340 M00115 R00137,R01560,R02556,R03005 RC00002,RC00477 ko00000,ko00001,ko00002,ko01000,ko03400 iECUMN_1333.ECUMN_0733,iJN746.PP_4810,iPC815.YPO2607,iSbBS512_1146.SbBS512_E0612 Bacteria 1RD0J@1224,2KW3W@206389,2VSQ7@28216,COG1057@1,COG1057@2 NA|NA|NA H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) HGDHCNMN_00612 1348657.M622_10600 1.3e-54 219.9 Rhodocyclales Bacteria 1N9UJ@1224,2KWHK@206389,2VNM5@28216,COG5473@1,COG5473@2 NA|NA|NA HGDHCNMN_00613 76114.ebA3976 2e-53 216.1 Rhodocyclales Bacteria 1N9UJ@1224,2KX03@206389,2VRZ3@28216,COG5473@1,COG5473@2 NA|NA|NA HGDHCNMN_00614 497321.C664_19605 3.2e-127 461.5 Rhodocyclales thrB 2.7.1.39 ko:K02204 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 M00018 R01771 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUKJ@1224,2KUYA@206389,2VH2I@28216,COG2334@1,COG2334@2 NA|NA|NA F Belongs to the pseudomonas-type ThrB family HGDHCNMN_00615 1123367.C666_16095 3.8e-287 993.8 Rhodocyclales rep GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044786,GO:0044787,GO:0046483,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 ko:K03656,ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1MU0G@1224,2KUF0@206389,2VJFM@28216,COG0210@1,COG0210@2 NA|NA|NA L it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction HGDHCNMN_00616 305700.B447_18648 2.1e-72 278.9 Rhodocyclales VY92_06375 Bacteria 1R3WM@1224,2KYVM@206389,2VQ6M@28216,COG4380@1,COG4380@2 NA|NA|NA S Putative bacterial lipoprotein (DUF799) HGDHCNMN_00618 1286093.C266_10801 2.1e-80 305.4 Burkholderiaceae csgG Bacteria 1K1N2@119060,1NDU8@1224,2VI5Y@28216,COG1462@1,COG1462@2 NA|NA|NA M Curli production assembly transport component CsgG HGDHCNMN_00619 748247.AZKH_0562 1.4e-209 735.3 Rhodocyclales acxB GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016885,GO:0017144,GO:0018710,GO:0042180,GO:0043443,GO:0044237,GO:0044281,GO:0071704,GO:1901568,GO:1902224 3.5.2.14,6.4.1.6 ko:K01474,ko:K10854 ko00330,ko01100,map00330,map01100 R03187 RC00632 ko00000,ko00001,ko01000 Bacteria 1QU46@1224,2KVW2@206389,2VI9T@28216,COG0146@1,COG0146@2 NA|NA|NA EQ Hydantoinase B/oxoprolinase HGDHCNMN_00620 76114.ebA4702 5.2e-92 343.6 Rhodocyclales acxC GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016885,GO:0017144,GO:0018710,GO:0042180,GO:0043443,GO:0044237,GO:0044281,GO:0071704,GO:1901568,GO:1902224 6.4.1.6 ko:K10856 ko00000,ko01000 Bacteria 1N485@1224,2KUTV@206389,2VK8X@28216,COG4647@1,COG4647@2 NA|NA|NA Q Acetone carboxylase gamma subunit HGDHCNMN_00621 85643.Tmz1t_3467 9.1e-257 892.9 Rhodocyclales 6.2.1.1 ko:K01895 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1MXDK@1224,2KVNN@206389,2VIAE@28216,COG0365@1,COG0365@2 NA|NA|NA I Acetyl-coenzyme A synthetase N-terminus HGDHCNMN_00622 1348657.M622_14965 4.2e-52 211.5 Rhodocyclales kdsB 2.7.7.38 ko:K00979 ko00540,ko01100,map00540,map01100 M00063 R03351,R11396 RC00152,RC00910 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1MUUU@1224,2KU7X@206389,2VINM@28216,COG1212@1,COG1212@2 NA|NA|NA M Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria HGDHCNMN_00623 497321.C664_14304 9.1e-105 386.3 Rhodocyclales adk GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 iJN746.PP_1506 Bacteria 1MXCZ@1224,2KUU9@206389,2VH1C@28216,COG0563@1,COG0563@2 NA|NA|NA F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism HGDHCNMN_00624 76114.ebA5088 4.5e-140 504.6 Rhodocyclales pfp 2.7.1.11,2.7.1.90 ko:K00850,ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 M00001,M00345 R00756,R00764,R02073,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Bacteria 1MVN3@1224,2KUJT@206389,2VK7J@28216,COG0205@1,COG0205@2 NA|NA|NA H Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions HGDHCNMN_00625 62928.azo1475 3.3e-138 498.8 Rhodocyclales ggt GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 Bacteria 1MUV6@1224,2KV6Y@206389,2VI60@28216,COG0405@1,COG0405@2 NA|NA|NA M Gamma-glutamyltranspeptidase HGDHCNMN_00626 497321.C664_08528 1.4e-86 325.9 Rhodocyclales bbsI ko:K06910 ko00000 Bacteria 1N0Y4@1224,2KUB9@206389,2VJ4C@28216,COG1881@1,COG1881@2 NA|NA|NA S Phospholipid-binding protein HGDHCNMN_00627 497321.C664_01715 1e-218 766.1 Rhodocyclales murJ GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0010876,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0030203,GO:0031224,GO:0031226,GO:0033036,GO:0034203,GO:0034204,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0070589,GO:0071554,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097035,GO:1901135,GO:1901137,GO:1901264,GO:1901505,GO:1901564,GO:1901566,GO:1901576 ko:K03980 ko00000,ko01011,ko02000 2.A.66.4 iECO103_1326.ECO103_1114 Bacteria 1MUH0@1224,2KVHB@206389,2VHTQ@28216,COG0728@1,COG0728@2 NA|NA|NA S Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane HGDHCNMN_00628 62928.azo0915 4.7e-158 563.9 Rhodocyclales accA GO:0001676,GO:0003674,GO:0003824,GO:0003989,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009987,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0032787,GO:0032991,GO:0042759,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576,GO:1902494,GO:1990234 2.1.3.15,6.4.1.2 ko:K01962,ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 iAF1260.b0185,iBWG_1329.BWG_0177,iEC55989_1330.EC55989_0179,iECDH10B_1368.ECDH10B_0165,iECDH1ME8569_1439.ECDH1ME8569_0178,iECED1_1282.ECED1_0191,iECH74115_1262.ECH74115_0195,iECIAI1_1343.ECIAI1_0185,iECNA114_1301.ECNA114_0175,iECO111_1330.ECO111_0186,iECO26_1355.ECO26_0187,iECP_1309.ECP_0193,iECSE_1348.ECSE_0184,iECSF_1327.ECSF_0200,iECSP_1301.ECSP_0184,iECW_1372.ECW_m0181,iECs_1301.ECs0187,iEKO11_1354.EKO11_3733,iEcDH1_1363.EcDH1_3418,iEcE24377_1341.EcE24377A_0189,iEcHS_1320.EcHS_A0187,iG2583_1286.G2583_0188,iJN746.PP_1607,iJO1366.b0185,iJR904.b0185,iLF82_1304.LF82_0008,iNRG857_1313.NRG857_00945,iSDY_1059.SDY_0201,iSFV_1184.SFV_0168,iSF_1195.SF0175,iSFxv_1172.SFxv_0185,iS_1188.S0178,iUMNK88_1353.UMNK88_190,iWFL_1372.ECW_m0181,iY75_1357.Y75_RS00935,iZ_1308.Z0197 Bacteria 1MURN@1224,2KUDJ@206389,2VHS0@28216,COG0825@1,COG0825@2 NA|NA|NA I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA HGDHCNMN_00629 748247.AZKH_3687 1.8e-94 353.2 Rhodocyclales tilS GO:0002097,GO:0002101,GO:0002136,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016879,GO:0032267,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 6.3.4.19 ko:K04075,ko:K14058 R09597 RC02633,RC02634 ko00000,ko01000,ko03016 Bacteria 1MU85@1224,2KW1P@206389,2VP12@28216,COG0037@1,COG0037@2 NA|NA|NA J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine HGDHCNMN_00630 748247.AZKH_3685 8.4e-76 290.0 Rhodocyclales dctR ko:K11712 ko02020,map02020 ko00000,ko00001,ko02022 Bacteria 1N6WR@1224,2KW5Q@206389,2VK0C@28216,COG4566@1,COG4566@2 NA|NA|NA K response regulator HGDHCNMN_00631 76114.ebA4156 2.9e-234 818.1 Rhodocyclales dctS 2.7.13.3 ko:K02482,ko:K11711,ko:K14986 ko02020,map02020 M00524 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1RCM9@1224,2KUUR@206389,2VI6T@28216,COG3829@1,COG3829@2,COG4191@1,COG4191@2 NA|NA|NA T Signal transduction histidine kinase HGDHCNMN_00632 1000565.METUNv1_01526 1.5e-154 552.4 Rhodocyclales dctP ko:K11688 ko02020,map02020 ko00000,ko00001,ko02000 2.A.56.1 Bacteria 1MVHC@1224,2KV1X@206389,2VHPJ@28216,COG1638@1,COG1638@2 NA|NA|NA G COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component HGDHCNMN_00633 748247.AZKH_3682 1.2e-99 369.4 Rhodocyclales dctQ ko:K11689,ko:K11690,ko:K21394 ko02020,map02020 ko00000,ko00001,ko02000 2.A.56.1 Bacteria 1R3YK@1224,2KVXN@206389,2VQMP@28216,COG3090@1,COG3090@2 NA|NA|NA G Tripartite ATP-independent periplasmic transporters, DctQ component HGDHCNMN_00634 159087.Daro_2991 5.2e-213 746.9 Rhodocyclales dctM GO:0005575,GO:0016020,GO:0016021,GO:0031224,GO:0044425 ko:K11690 ko02020,map02020 ko00000,ko00001,ko02000 2.A.56.1 Bacteria 1MU0F@1224,2KV2N@206389,2VHJP@28216,COG1593@1,COG1593@2 NA|NA|NA G Tripartite ATP-independent periplasmic transporter, DctM component HGDHCNMN_00635 76114.ebA5128 0.0 1075.8 Rhodocyclales fixI GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.4,3.6.3.54 ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 Bacteria 1MU08@1224,2KV1V@206389,2VJSM@28216,COG2217@1,COG2217@2,COG2608@1,COG2608@2 NA|NA|NA P cation transport ATPase HGDHCNMN_00636 1121004.ATVC01000002_gene593 3.3e-15 87.0 Neisseriales ccoS Bacteria 1NG90@1224,2KS1K@206351,2VWG5@28216,COG3197@1,COG3197@2 NA|NA|NA P cytochrome oxidase maturation protein cbb3-type HGDHCNMN_00637 497321.C664_18342 1.3e-72 278.9 Rhodocyclales ndk GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 M00049,M00050,M00052,M00053 R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895 RC00002 ko00000,ko00001,ko00002,ko01000,ko04131 Bacteria 1R9ZA@1224,2KW72@206389,2VQ2J@28216,COG0105@1,COG0105@2 NA|NA|NA F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate HGDHCNMN_00638 305700.B447_18753 4.5e-173 614.0 Rhodocyclales rlmN GO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363 2.1.1.192 ko:K06941 ko00000,ko01000,ko03009 Bacteria 1MUYK@1224,2KVXU@206389,2VIBN@28216,COG0820@1,COG0820@2 NA|NA|NA J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs HGDHCNMN_00639 76114.ebA1266 7.8e-74 283.9 Rhodocyclales pilF ko:K02453,ko:K02656 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15 Bacteria 1MXPC@1224,2KW79@206389,2VNC8@28216,COG3063@1,COG3063@2 NA|NA|NA NU type 4 pilus biogenesis protein HGDHCNMN_00640 76114.ebA1262 2.4e-42 179.5 Rhodocyclales ko:K15539 ko00000 Bacteria 1N240@1224,2KWMY@206389,2VVFV@28216,COG1426@1,COG1426@2 NA|NA|NA S Domain of unknown function (DUF4115) HGDHCNMN_00641 748247.AZKH_0806 9.1e-194 682.9 Rhodocyclales ispG GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009055,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0022900,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R08689,R10859 RC01486 ko00000,ko00001,ko00002,ko01000 iJN678.gcpE Bacteria 1MUAX@1224,2KUBR@206389,2VID7@28216,COG0821@1,COG0821@2 NA|NA|NA I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate HGDHCNMN_00642 62928.azo0928 2.8e-206 724.5 Rhodocyclales hisS GO:0003674,GO:0003824,GO:0004812,GO:0004821,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006427,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.21 ko:K01892 ko00970,map00970 M00359,M00360 R03655 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iE2348C_1286.E2348C_2797,iECNA114_1301.ECNA114_2592,iECSF_1327.ECSF_2358 Bacteria 1MV2K@1224,2KUKY@206389,2VIGA@28216,COG0124@1,COG0124@2 NA|NA|NA J histidyl-tRNA synthetase HGDHCNMN_00643 76114.ebA1259 1.1e-60 240.0 Rhodocyclales yfgM GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0044425,GO:0044459,GO:0044464,GO:0071575,GO:0071944,GO:0098552 Bacteria 1N117@1224,2KWT1@206389,2VSHE@28216,COG2976@1,COG2976@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_00644 62928.azo0930 1.4e-81 310.1 Rhodocyclales bamB GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0008152,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0016491,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0055114,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 ko:K17713 ko00000,ko02000 1.B.33.1 Bacteria 1MXIJ@1224,2KVKZ@206389,2VHH5@28216,COG1520@1,COG1520@2 NA|NA|NA M Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane HGDHCNMN_00645 76114.ebA1256 6.4e-198 696.8 Rhodocyclales der GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 ko:K03977 ko00000,ko03009 Bacteria 1MU9S@1224,2KVNI@206389,2VI8D@28216,COG1160@1,COG1160@2 NA|NA|NA S GTPase that plays an essential role in the late steps of ribosome biogenesis HGDHCNMN_00646 1304883.KI912532_gene1970 2.6e-33 147.5 Rhodocyclales hfq GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016246,GO:0016441,GO:0016458,GO:0017148,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030423,GO:0031047,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0035194,GO:0040029,GO:0040033,GO:0043170,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045974,GO:0045975,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113 ko:K03666 ko02024,ko03018,ko05111,map02024,map03018,map05111 ko00000,ko00001,ko03019,ko03036 Bacteria 1MZM1@1224,2KWYA@206389,2VTXK@28216,COG1923@1,COG1923@2 NA|NA|NA J RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs HGDHCNMN_00647 497321.C664_19541 1.8e-148 532.3 Rhodocyclales hflX GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006464,GO:0006468,GO:0006518,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018105,GO:0018193,GO:0018209,GO:0019001,GO:0019222,GO:0019538,GO:0019843,GO:0022411,GO:0030554,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032790,GO:0032984,GO:0032988,GO:0034248,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0036211,GO:0036289,GO:0043021,GO:0043022,GO:0043023,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:2000112 ko:K03665 ko00000,ko03009 Bacteria 1MUA0@1224,2KV0C@206389,2VI86@28216,COG2262@1,COG2262@2 NA|NA|NA S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis HGDHCNMN_00648 159087.Daro_2978 3.6e-145 521.5 Rhodocyclales hflK GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0031233,GO:0032991,GO:0043086,GO:0043170,GO:0044092,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0098796,GO:0140096,GO:1901564 ko:K04088 M00742 ko00000,ko00002,ko01000 Bacteria 1MUM2@1224,2KUKU@206389,2VIG2@28216,COG0330@1,COG0330@2 NA|NA|NA O HflC and HflK could encode or regulate a protease HGDHCNMN_00649 159087.Daro_2977 5.2e-114 417.5 Rhodocyclales hflC GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0031233,GO:0032991,GO:0043086,GO:0043170,GO:0044092,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0098796,GO:0140096,GO:1901564 ko:K04087 M00742 ko00000,ko00002,ko01000 Bacteria 1MV7R@1224,2KUAU@206389,2VI9W@28216,COG0330@1,COG0330@2 NA|NA|NA O HflC and HflK could regulate a protease HGDHCNMN_00650 522306.CAP2UW1_2913 2.9e-16 90.5 Betaproteobacteria yjeT ko:K09937 ko00000 Bacteria 1NG9Q@1224,2VXNJ@28216,COG3242@1,COG3242@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_00651 76114.ebA1250 2.3e-151 542.0 Rhodocyclales hisZ 2.4.2.17,6.1.1.21 ko:K00765,ko:K01892,ko:K02502 ko00340,ko00970,ko01100,ko01110,ko01230,map00340,map00970,map01100,map01110,map01230 M00026,M00359,M00360 R01071,R03655 RC00055,RC00523,RC02819,RC03200 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1MWIG@1224,2KUII@206389,2VHVX@28216,COG3705@1,COG3705@2 NA|NA|NA E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine HGDHCNMN_00652 497321.C664_19516 1.1e-229 802.4 Rhodocyclales purA GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 M00049 R01135 RC00458,RC00459 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_4393,iECSF_1327.ECSF_4063,iJN746.PP_4889 Bacteria 1MU5B@1224,2KV2X@206389,2VHBR@28216,COG0104@1,COG0104@2 NA|NA|NA F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP HGDHCNMN_00655 76114.ebA1247 0.0 1159.4 Rhodocyclales rnr GO:0000175,GO:0003674,GO:0003724,GO:0003824,GO:0004386,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008408,GO:0008997,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009628,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016896,GO:0017111,GO:0019222,GO:0019439,GO:0034458,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901575 ko:K12573 ko03018,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 Bacteria 1MUS6@1224,2KUXR@206389,2VHBJ@28216,COG0557@1,COG0557@2 NA|NA|NA J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs HGDHCNMN_00656 748247.AZKH_0821 6.1e-105 387.1 Rhodocyclales rlmB GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 ko:K03218,ko:K03437,ko:K22132 ko00000,ko01000,ko03009,ko03016 Bacteria 1MWCM@1224,2KV2Q@206389,2VHF4@28216,COG0566@1,COG0566@2 NA|NA|NA J Specifically methylates the ribose of guanosine 2251 in 23S rRNA HGDHCNMN_00657 1192124.LIG30_4654 7.2e-36 157.5 Burkholderiaceae ko:K07226 ko00000 Bacteria 1KHDI@119060,1RFVC@1224,2VTN8@28216,COG0748@1,COG0748@2 NA|NA|NA P Pfam Pyridoxamine 5'-phosphate HGDHCNMN_00658 1288494.EBAPG3_18000 4.4e-85 321.2 Nitrosomonadales Bacteria 1RE9C@1224,2VPGB@28216,372QM@32003,COG2834@1,COG2834@2 NA|NA|NA M Outer membrane lipoprotein-sorting protein HGDHCNMN_00659 305700.B447_02843 1.9e-88 332.4 Rhodocyclales ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MU45@1224,2KU68@206389,2VQWS@28216,COG1136@1,COG1136@2 NA|NA|NA V ATP-binding cassette (ABC) transporters form a large family of proteins responsible for translocation of a variety of compounds across biological membranes. They are composed of two transmembrane domains responsible for binding and transport and two nucleotide-binding domains responsible for coupling the energy of ATP hydrolysis to conformational changes in the TMDs HGDHCNMN_00660 62928.azo3285 3e-115 422.2 Rhodocyclales Bacteria 1MVX1@1224,2KVG6@206389,2VKXR@28216,COG3103@1,COG3103@2 NA|NA|NA T Sh3 type 3 domain protein HGDHCNMN_00661 62928.azo3283 9.4e-80 303.1 Rhodocyclales wza ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 1.B.18 Bacteria 1RFBH@1224,2KVHI@206389,2VKB3@28216,COG1596@1,COG1596@2 NA|NA|NA M COG1596 Periplasmic protein involved in polysaccharide export HGDHCNMN_00662 1439940.BAY1663_04992 2e-23 116.7 Gammaproteobacteria Bacteria 1NM6K@1224,1SW7N@1236,2CEHR@1,33D10@2 NA|NA|NA HGDHCNMN_00664 1000565.METUNv1_00301 1.5e-51 209.5 Betaproteobacteria Bacteria 1RC7F@1224,2CCJR@1,2W4MN@28216,2ZCU4@2 NA|NA|NA HGDHCNMN_00665 768706.Desor_4228 6.6e-120 438.3 Peptococcaceae Bacteria 1TP8D@1239,24808@186801,263U9@186807,COG1455@1,COG1455@2,COG2200@1,COG2200@2 NA|NA|NA U TIGRFAM PTS system, lactose cellobiose family IIC HGDHCNMN_00666 1123487.KB892857_gene2425 1.3e-272 945.3 Rhodocyclales ybiT GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0050896 ko:K06158 ko00000,ko03012 Bacteria 1MU37@1224,2KUDD@206389,2VHGH@28216,COG0488@1,COG0488@2 NA|NA|NA S of ABC transporters with duplicated ATPase HGDHCNMN_00667 1348657.M622_00540 6.6e-35 153.7 Rhodocyclales Bacteria 1P0X8@1224,2C5XS@1,2KZ65@206389,2W4GI@28216,3438D@2 NA|NA|NA HGDHCNMN_00668 883126.HMPREF9710_03726 1.1e-15 90.5 Proteobacteria Bacteria 1P7ZM@1224,COG4932@1,COG4932@2 NA|NA|NA M domain protein HGDHCNMN_00669 748247.AZKH_0534 7.8e-113 413.3 Rhodocyclales yebC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896 Bacteria 1MW3X@1224,2KUG6@206389,2VIA5@28216,COG0217@1,COG0217@2 NA|NA|NA K transcriptional regulatory protein HGDHCNMN_00670 62928.azo0576 3.8e-210 737.6 Rhodocyclales yjgR ko:K06915,ko:K19172 ko00000,ko02048 Bacteria 1MU59@1224,2KVA8@206389,2VIJY@28216,COG0433@1,COG0433@2 NA|NA|NA S Bacterial protein of unknown function (DUF853) HGDHCNMN_00671 1210884.HG799471_gene14655 1.5e-136 494.2 Bacteria Bacteria COG2834@1,COG2834@2,COG3209@1,COG3209@2 NA|NA|NA M Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) HGDHCNMN_00672 864051.BurJ1DRAFT_3701 5.1e-93 348.6 unclassified Burkholderiales 2.7.7.65 ko:K02488 ko02020,ko04112,map02020,map04112 M00511 R08057 ko00000,ko00001,ko00002,ko01000,ko02022 Bacteria 1KNAJ@119065,1MZV7@1224,2VVBP@28216,COG2199@1,COG3706@2 NA|NA|NA T diguanylate cyclase HGDHCNMN_00673 1217718.ALOU01000091_gene1692 4.7e-38 164.1 Burkholderiaceae exbD1 ko:K03559 ko00000,ko02000 1.A.30.2.1 Bacteria 1K70R@119060,1MZ6M@1224,2VSVW@28216,COG0848@1,COG0848@2 NA|NA|NA U PFAM Biopolymer transport protein ExbD TolR HGDHCNMN_00674 1120999.JONM01000006_gene2313 6.6e-72 277.3 Neisseriales exbB ko:K03561,ko:K03562 ko01120,map01120 ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 Bacteria 1NMPB@1224,2KQZT@206351,2VJ4U@28216,COG0811@1,COG0811@2 NA|NA|NA U Transporter, MotA TolQ ExbB proton channel family protein HGDHCNMN_00675 1000565.METUNv1_01413 7.2e-24 117.9 Rhodocyclales tonB1 ko:K03832 ko00000,ko02000 2.C.1.1 Bacteria 1MZPX@1224,2KWVW@206389,2VM32@28216,COG0810@1,COG0810@2 NA|NA|NA M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins HGDHCNMN_00676 1288494.EBAPG3_14930 9.8e-45 186.8 Betaproteobacteria ko:K09950 ko00000 Bacteria 1RB8H@1224,2VSUS@28216,COG3495@1,COG3495@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_00677 1121035.AUCH01000002_gene1540 4.3e-130 471.5 Rhodocyclales ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MVN1@1224,2KXE4@206389,2VJWZ@28216,COG0577@1,COG0577@2 NA|NA|NA V COG0577 ABC-type antimicrobial peptide transport system, permease component HGDHCNMN_00678 305700.B447_19139 2.3e-71 275.4 Rhodocyclales bceA ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1RA1K@1224,2KYJQ@206389,2VQ4I@28216,COG1136@1,COG1136@2 NA|NA|NA V COG1136 ABC-type antimicrobial peptide transport system, ATPase component HGDHCNMN_00679 522306.CAP2UW1_4258 7.5e-67 260.4 Betaproteobacteria Bacteria 1N204@1224,297YV@1,2VVM4@28216,2ZV50@2 NA|NA|NA S Protein of unknown function (DUF1826) HGDHCNMN_00680 1121035.AUCH01000002_gene1543 5.4e-44 183.7 Rhodocyclales queD 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 1PSH6@1224,2KZ2A@206389,2VUV7@28216,COG0720@1,COG0720@2 NA|NA|NA H 6-pyruvoyl tetrahydropterin synthase HGDHCNMN_00681 522306.CAP2UW1_4259 4.6e-188 664.1 Betaproteobacteria pyrC 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW10@1224,2VJZV@28216,COG0044@1,COG0044@2 NA|NA|NA F Catalyzes the hydrolytic cleavage of imides that range from linear to heterocyclic and that include hydantoins, dihydropyrimidines, and phthalimides HGDHCNMN_00682 1121035.AUCH01000001_gene1779 1.5e-87 328.9 Rhodocyclales ccmM ko:K03321,ko:K08698 ko00000,ko02000 2.A.53.3 Bacteria 1N26K@1224,2KY37@206389,2VKSP@28216,COG0663@1,COG0663@2 NA|NA|NA S Bacterial transferase hexapeptide (six repeats) HGDHCNMN_00683 522306.CAP2UW1_4262 0.0 1082.8 unclassified Betaproteobacteria thrS 6.1.1.3 ko:K01868 ko00970,map00970 M00359,M00360 R03663 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1KPSG@119066,1MUP2@1224,2VHFD@28216,COG0441@1,COG0441@2 NA|NA|NA J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) HGDHCNMN_00684 522306.CAP2UW1_4269 1.5e-50 205.7 unclassified Betaproteobacteria hisI GO:0008150,GO:0040007 3.5.4.19,3.6.1.31 ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037 RC00002,RC01055 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1606 Bacteria 1KQ18@119066,1MW67@1224,2VR9B@28216,COG0139@1,COG0139@2 NA|NA|NA E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP HGDHCNMN_00685 522306.CAP2UW1_4270 2.2e-47 195.3 Betaproteobacteria zur GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0008270,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010035,GO:0010038,GO:0010043,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0042221,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046872,GO:0046914,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K02076,ko:K03711,ko:K09823 ko02024,map02024 ko00000,ko00001,ko03000 Bacteria 1MZIW@1224,2VUP1@28216,COG0735@1,COG0735@2 NA|NA|NA P Belongs to the Fur family HGDHCNMN_00686 522306.CAP2UW1_2906 4.7e-25 121.3 Bacteria Bacteria COG2909@1,COG2909@2 NA|NA|NA K trisaccharide binding HGDHCNMN_00687 365044.Pnap_3599 1.1e-302 1045.8 Betaproteobacteria ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1MXJU@1224,2VN9X@28216,COG4772@1,COG4772@2 NA|NA|NA P TonB-dependent Receptor Plug HGDHCNMN_00689 1366050.N234_11975 2.8e-58 231.9 Burkholderiaceae ko:K02282,ko:K07687,ko:K07690 ko02020,ko02026,ko05133,map02020,map02026,map05133 M00474,M00477,M00697 ko00000,ko00001,ko00002,ko01504,ko02022,ko02035,ko02044 Bacteria 1KGEY@119060,1QW4D@1224,2VRIA@28216,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon HGDHCNMN_00690 640081.Dsui_2409 1.4e-165 589.3 Rhodocyclales lplT ko:K08227 ko00000,ko02000 2.A.1.42 Bacteria 1QTWR@1224,2KU64@206389,2VIC5@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HGDHCNMN_00691 62928.azo1715 1.4e-111 409.5 Rhodocyclales rbcR Bacteria 1MWVU@1224,2KU9Y@206389,2VIX7@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_00692 1123487.KB892841_gene4235 3.3e-115 421.8 Rhodocyclales alr GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006023,GO:0006024,GO:0006082,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008784,GO:0009058,GO:0009059,GO:0009078,GO:0009079,GO:0009252,GO:0009273,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0019842,GO:0030170,GO:0030203,GO:0030632,GO:0034645,GO:0036094,GO:0036361,GO:0040007,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044281,GO:0044283,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0047661,GO:0048037,GO:0050662,GO:0070279,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.1 ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 R00401 RC00285 ko00000,ko00001,ko01000,ko01011 iEC55989_1330.EC55989_1285,iECIAI39_1322.ECIAI39_1880,iECO103_1326.ECO103_1292,iECO26_1355.ECO26_1703,iECSE_1348.ECSE_1238,iECUMN_1333.ECUMN_1479,iECW_1372.ECW_m1275,iEKO11_1354.EKO11_2666,iEcE24377_1341.EcE24377A_1335,iWFL_1372.ECW_m1275,iYL1228.KPN_02308 Bacteria 1MV0Q@1224,2KV0K@206389,2VIXM@28216,COG0787@1,COG0787@2 NA|NA|NA M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids HGDHCNMN_00693 748247.AZKH_2729 3.6e-212 744.2 Rhodocyclales radA GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 ko:K04485 ko00000,ko03400 Bacteria 1MUJQ@1224,2KUIZ@206389,2VH93@28216,COG1066@1,COG1066@2 NA|NA|NA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function HGDHCNMN_00694 1121035.AUCH01000004_gene298 5.9e-29 133.3 Rhodocyclales hupB ko:K03530 ko00000,ko03032,ko03036,ko03400 Bacteria 1MZ5B@1224,2KXFI@206389,2VU4V@28216,COG0776@1,COG0776@2 NA|NA|NA L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions HGDHCNMN_00695 159087.Daro_3919 5.4e-150 537.7 Rhodocyclales Bacteria 1MUA8@1224,2KWC0@206389,2VJ1B@28216,COG1538@1,COG1538@2 NA|NA|NA MU RND efflux system, outer membrane lipoprotein HGDHCNMN_00696 159087.Daro_3918 1e-131 476.9 Rhodocyclales macA_1 ko:K02005,ko:K13888 M00709 ko00000,ko00002,ko02000 8.A.1 Bacteria 1MU8D@1224,2KVEK@206389,2VH9K@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family HGDHCNMN_00697 1304883.KI912532_gene2801 1.3e-104 386.0 Rhodocyclales ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MU45@1224,2KVSC@206389,2VKEW@28216,COG1136@1,COG1136@2 NA|NA|NA V ATPases associated with a variety of cellular activities HGDHCNMN_00698 1304883.KI912532_gene2802 8e-171 606.7 Rhodocyclales salY ko:K02004,ko:K05685 ko02010,map02010 M00258,M00709 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.122.1,3.A.1.122.12 Bacteria 1PBKH@1224,2KZWY@206389,2W3RM@28216,COG0577@1,COG0577@2 NA|NA|NA V ABC-type antimicrobial peptide transport system, permease component HGDHCNMN_00699 987059.RBXJA2T_02787 1.1e-49 203.8 unclassified Burkholderiales ko:K07814 ko00000,ko02022 Bacteria 1KKWQ@119065,1MUB8@1224,2VH1F@28216,COG3437@1,COG3437@2 NA|NA|NA T metal-dependent phosphohydrolase HD sub domain HGDHCNMN_00700 748247.AZKH_4508 1.4e-104 386.0 Rhodocyclales MA20_22480 Bacteria 1NK3M@1224,2KZW8@206389,2VKPD@28216,COG2267@1,COG2267@2 NA|NA|NA I Alpha/beta hydrolase family HGDHCNMN_00702 1286631.X805_09040 3.4e-58 230.7 Betaproteobacteria Bacteria 1RM5X@1224,2BB53@1,2VTKG@28216,324MI@2 NA|NA|NA HGDHCNMN_00703 1286631.X805_09030 3.4e-258 897.1 unclassified Burkholderiales ptlI Bacteria 1KMM7@119065,1MV75@1224,2VIRM@28216,COG2124@1,COG2124@2 NA|NA|NA C Cytochrome P450 HGDHCNMN_00704 1286631.X805_09020 2.6e-186 657.9 Betaproteobacteria Bacteria 1MXCB@1224,2VXFM@28216,COG0596@1,COG0596@2 NA|NA|NA S Alpha beta hydrolase HGDHCNMN_00705 1348657.M622_14705 2e-32 144.4 Rhodocyclales poxE ko:K16245 ko00361,ko00362,ko00623,ko01100,ko01120,ko01220,map00361,map00362,map00623,map01100,map01120,map01220 M00548 R03560,R03608,R10042,R10043 RC00046,RC00490 ko00000,ko00001,ko00002 Bacteria 1N22H@1224,2DGRK@1,2KWQH@206389,2VSPD@28216,32U7S@2 NA|NA|NA S Phenol hydroxylase conserved region HGDHCNMN_00706 85643.Tmz1t_3111 5.7e-173 613.6 Rhodocyclales nqrF 1.6.5.8 ko:K00351,ko:K16246 ko00361,ko00362,ko00623,ko01100,ko01120,ko01220,map00361,map00362,map00623,map01100,map01120,map01220 M00548 R03560,R03608,R10042,R10043 RC00046,RC00490 ko00000,ko00001,ko00002,ko01000 Bacteria 1QTUV@1224,2KUW1@206389,2VIBG@28216,COG2871@1,COG2871@2 NA|NA|NA C COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases HGDHCNMN_00707 85643.Tmz1t_3109 5.9e-166 590.1 Rhodocyclales 1.13.11.2 ko:K00446 ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220 M00569 R00816,R04089,R05295,R05404,R05406,R07795 RC00387,RC00643,RC01075,RC01364,RC01914 br01602,ko00000,ko00001,ko00002,ko01000 Bacteria 1MUWY@1224,2KUG0@206389,2VKV3@28216,COG0346@1,COG0346@2 NA|NA|NA E COG0346 Lactoylglutathione lyase and related lyases HGDHCNMN_00708 305700.B447_13349 2.4e-90 338.6 Rhodocyclales Bacteria 1Q85H@1224,2KV86@206389,2VIB4@28216,COG1802@1,COG1802@2 NA|NA|NA K transcriptional HGDHCNMN_00709 305700.B447_13344 4e-43 181.0 Rhodocyclales Bacteria 1RH9E@1224,2KWQD@206389,2VT15@28216,COG3193@1,COG3193@2 NA|NA|NA S protein, possibly involved in utilization of glycolate and propanediol HGDHCNMN_00710 870187.Thini_4212 1.6e-98 365.9 Thiotrichales Bacteria 1MUWC@1224,1RQBN@1236,46049@72273,COG1028@1,COG1028@2 NA|NA|NA IQ PFAM short chain dehydrogenase HGDHCNMN_00711 1149133.ppKF707_3397 9.6e-153 546.2 Gammaproteobacteria mhpF 1.2.1.10,1.2.1.87 ko:K18366 ko00362,ko00620,ko00621,ko00622,ko00650,ko01100,ko01120,ko01220,map00362,map00620,map00621,map00622,map00650,map01100,map01120,map01220 M00569 R00228,R01172,R09097 RC00004,RC00184,RC01195 br01602,ko00000,ko00001,ko00002,ko01000 Bacteria 1MV23@1224,1RNDJ@1236,COG4569@1,COG4569@2 NA|NA|NA Q Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD( ) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds HGDHCNMN_00712 1121035.AUCH01000001_gene1763 1.9e-173 615.1 Rhodocyclales mhpE 4.1.3.39,4.1.3.43 ko:K01666,ko:K18365 ko00360,ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00360,map00362,map00621,map00622,map01100,map01120,map01220 M00545,M00569 R00750,R05298 RC00307,RC00371,RC00572 br01602,ko00000,ko00001,ko00002,ko01000 Bacteria 1MVQG@1224,2KVIN@206389,2VIXZ@28216,COG0119@1,COG0119@2 NA|NA|NA E Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds HGDHCNMN_00713 1121035.AUCH01000001_gene1765 2.4e-20 105.1 Rhodocyclales xylH 5.3.2.6 ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 M00569 R03966,R05389 RC01040,RC01355 ko00000,ko00001,ko00002,ko01000 Bacteria 1N7K1@1224,2KXCS@206389,2VWGR@28216,COG1942@1,COG1942@2 NA|NA|NA G Tautomerase enzyme HGDHCNMN_00714 1121004.ATVC01000014_gene2006 2.1e-102 379.0 Betaproteobacteria pcmK Bacteria 1R6GU@1224,2VPAQ@28216,COG4313@1,COG4313@2 NA|NA|NA C Putative MetA-pathway of phenol degradation HGDHCNMN_00715 870187.Thini_3652 2e-200 705.3 Thiotrichales gabD 1.2.1.16,1.2.1.20,1.2.1.79 ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 M00027 R00713,R00714,R02401 RC00080 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU1V@1224,1RMBQ@1236,460F9@72273,COG1012@1,COG1012@2 NA|NA|NA C Aldehyde dehydrogenase family HGDHCNMN_00716 159087.Daro_1677 2.5e-47 195.3 Rhodocyclales Bacteria 1QTX0@1224,2KW69@206389,2W3XP@28216,COG0477@1,COG2814@2 NA|NA|NA EGP of the major facilitator HGDHCNMN_00718 1123367.C666_18830 9.9e-102 376.3 Rhodocyclales Bacteria 1MU67@1224,2KVAP@206389,2VHHB@28216,COG0745@1,COG0745@2 NA|NA|NA K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain HGDHCNMN_00719 640081.Dsui_2638 1e-21 109.4 Rhodocyclales ko:K07152,ko:K07810 ko02020,map02020 ko00000,ko00001,ko03029 2.A.6.1.4 Bacteria 1N8CJ@1224,2KX75@206389,2VVSU@28216,COG5569@1,COG5569@2 NA|NA|NA S Copper binding periplasmic protein CusF HGDHCNMN_00720 640081.Dsui_2637 3.5e-153 548.1 Rhodocyclales cebC Bacteria 1PCPQ@1224,2KUNJ@206389,2VMAB@28216,COG1538@1,COG1538@2 NA|NA|NA MU PFAM Outer membrane efflux protein HGDHCNMN_00721 1304883.KI912532_gene2831 2.4e-188 665.2 Rhodocyclales cusB ko:K07798 ko02020,map02020 ko00000,ko00001,ko02000 2.A.6.1.4,8.A.1 Bacteria 1MVAS@1224,2KVT7@206389,2VJXV@28216,COG0845@1,COG0845@2,COG5569@1,COG5569@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family HGDHCNMN_00722 522306.CAP2UW1_0150 0.0 1717.2 unclassified Betaproteobacteria cusA ko:K07787,ko:K15726 ko02020,map02020 ko00000,ko00001,ko02000 2.A.6.1.2,2.A.6.1.4 iAF987.Gmet_1547 Bacteria 1KQHT@119066,1NUIV@1224,2VHCZ@28216,COG3696@1,COG3696@2 NA|NA|NA P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family HGDHCNMN_00724 748247.AZKH_4307 7.7e-69 266.9 Rhodocyclales VM57_04575 Bacteria 1RDIV@1224,2KWHD@206389,2VQSX@28216,COG1284@1,COG1284@2 NA|NA|NA S Uncharacterised 5xTM membrane BCR, YitT family COG1284 HGDHCNMN_00725 1121448.DGI_3362 1e-45 190.3 Desulfovibrionales 3.5.1.28 ko:K01448,ko:K02395,ko:K17733 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko02035,ko03036 Bacteria 1Q53D@1224,2MEK3@213115,2X19Y@28221,43EUQ@68525,COG1705@1,COG1705@2 NA|NA|NA NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HGDHCNMN_00726 395495.Lcho_3613 8.2e-88 330.5 Betaproteobacteria Bacteria 1PMCV@1224,2VNJA@28216,2Z7TM@2,COG5660@1 NA|NA|NA S TRAP transporter T-component HGDHCNMN_00727 395495.Lcho_3612 2.1e-143 515.4 Betaproteobacteria ko:K11688,ko:K21395 ko02020,map02020 ko00000,ko00001,ko02000 2.A.56.1 Bacteria 1PMWE@1224,2VNJI@28216,COG1638@1,COG1638@2 NA|NA|NA G Bacterial extracellular solute-binding protein, family 7 HGDHCNMN_00729 159087.Daro_3576 1.1e-221 776.2 Rhodocyclales ko:K11690 ko02020,map02020 ko00000,ko00001,ko02000 2.A.56.1 Bacteria 1MU0F@1224,2M00C@206389,2VMTA@28216,COG1593@1,COG1593@2 NA|NA|NA G Tripartite ATP-independent periplasmic transporters, DctQ component HGDHCNMN_00731 76114.ebA6671 2.4e-59 235.0 Rhodocyclales moaE GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0030366,GO:0032324,GO:0034641,GO:0042278,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.8.1.12 ko:K03635 ko00790,ko01100,ko04122,map00790,map01100,map04122 R09395 RC02507 ko00000,ko00001,ko01000 iAPECO1_1312.APECO1_1305,iEC042_1314.EC042_0869,iEC55989_1330.EC55989_0828,iECABU_c1320.ECABU_c08270,iECED1_1282.ECED1_0750,iECIAI1_1343.ECIAI1_0820,iECIAI39_1322.ECIAI39_0761,iECNA114_1301.ECNA114_0717,iECO103_1326.ECO103_0820,iECO111_1330.ECO111_0846,iECO26_1355.ECO26_0911,iECOK1_1307.ECOK1_0787,iECP_1309.ECP_0799,iECS88_1305.ECS88_0802,iECSE_1348.ECSE_0839,iECSF_1327.ECSF_0711,iECW_1372.ECW_m0841,iEKO11_1354.EKO11_3101,iEcE24377_1341.EcE24377A_0848,iG2583_1286.G2583_1013,iLF82_1304.LF82_1369,iNRG857_1313.NRG857_03500,iSSON_1240.SSON_0764,iUMN146_1321.UM146_13720,iUTI89_1310.UTI89_C0785,iWFL_1372.ECW_m0841,ic_1306.c0867 Bacteria 1RGUX@1224,2KW54@206389,2VRMG@28216,COG0314@1,COG0314@2 NA|NA|NA H Molybdopterin converting factor, large subunit HGDHCNMN_00732 497321.C664_01865 1.5e-23 115.2 Rhodocyclales moaD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.12 ko:K03636,ko:K21142 ko00790,ko01100,ko04122,map00790,map01100,map04122 R09395 RC02507 ko00000,ko00001,ko01000 Bacteria 1N0IE@1224,2KX9K@206389,2VVSP@28216,COG1977@1,COG1977@2 NA|NA|NA H Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin HGDHCNMN_00733 1366050.N234_13165 4.3e-148 531.2 Burkholderiaceae moeA 2.10.1.1 ko:K03750 ko00790,ko01100,map00790,map01100 R09735 RC03462 ko00000,ko00001,ko01000 Bacteria 1JZXP@119060,1MVD5@1224,2VIFK@28216,COG0303@1,COG0303@2 NA|NA|NA H MoeA domain protein domain I and II HGDHCNMN_00734 85643.Tmz1t_2526 8.3e-66 256.5 Rhodocyclales mobB GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.10.1.1,2.7.7.77 ko:K02379,ko:K03750,ko:K03752,ko:K03753,ko:K13818 ko00790,ko01100,map00790,map01100 R09735,R11581 RC03462 ko00000,ko00001,ko01000 iB21_1397.B21_03691,iBWG_1329.BWG_3527,iECBD_1354.ECBD_4174,iECDH1ME8569_1439.ECDH1ME8569_3728,iEcDH1_1363.EcDH1_4130,iJO1366.b3856,iSbBS512_1146.SbBS512_E4328,iY75_1357.Y75_RS17805 Bacteria 1RD3Q@1224,2KWDE@206389,2VSIP@28216,COG1763@1,COG1763@2 NA|NA|NA H molybdopterin-guanine dinucleotide biosynthesis protein HGDHCNMN_00735 76114.ebA6677 1.7e-95 355.9 Rhodocyclales Bacteria 1P9A0@1224,2KU66@206389,2VISX@28216,COG2308@1,COG2308@2 NA|NA|NA S Evidence 4 Homologs of previously reported genes of HGDHCNMN_00736 365044.Pnap_2641 3.3e-117 428.3 Comamonadaceae MA20_09270 2.7.13.1,2.7.13.3 ko:K05962,ko:K07675 ko02020,map02020 M00473 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MWPN@1224,2VQ79@28216,4AI92@80864,COG4585@1,COG4585@2 NA|NA|NA T PFAM ATP-binding region, ATPase domain protein domain protein HGDHCNMN_00737 1123255.JHYS01000001_gene1832 3.3e-16 92.8 Proteobacteria Bacteria 1P73X@1224,28XD7@1,2ZJAY@2 NA|NA|NA HGDHCNMN_00738 1116472.MGMO_11c00060 1.2e-184 652.9 Methylococcales ydiU ko:K08997 ko00000 Bacteria 1MVK3@1224,1RNCS@1236,1XE5J@135618,COG0397@1,COG0397@2 NA|NA|NA S Belongs to the UPF0061 (SELO) family HGDHCNMN_00739 85643.Tmz1t_2831 1.2e-135 490.7 Rhodocyclales 2.7.13.3 ko:K11527 ko00000,ko01000,ko01001,ko02022 Bacteria 1NC9X@1224,2KZWQ@206389,2WGIN@28216,COG0642@1,COG0642@2,COG0784@1,COG0784@2,COG2198@1,COG2198@2,COG2202@1,COG2202@2,COG3829@1,COG3829@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_00740 1123368.AUIS01000008_gene2156 1.3e-42 179.5 Gammaproteobacteria Bacteria 1RHUE@1224,1SDQZ@1236,2AH4X@1,317EK@2 NA|NA|NA HGDHCNMN_00741 497321.C664_06758 1.7e-126 459.1 Rhodocyclales Bacteria 1MUWD@1224,2KUX9@206389,2VMUP@28216,COG0348@1,COG0348@2 NA|NA|NA C 4Fe-4S binding domain HGDHCNMN_00742 1163617.SCD_n00453 9.5e-33 146.4 Betaproteobacteria Bacteria 1N5DU@1224,2C0CP@1,2VU5I@28216,32SP5@2 NA|NA|NA HGDHCNMN_00743 159087.Daro_3188 5.2e-55 220.7 Rhodocyclales Bacteria 1N2JK@1224,2BX44@1,2KXAF@206389,2VVHA@28216,32VIR@2 NA|NA|NA HGDHCNMN_00744 522306.CAP2UW1_3121 1.5e-09 68.9 Proteobacteria ypeC Bacteria 1RHG1@1224,2B58A@1,31Y28@2 NA|NA|NA S Protein of unknown function (DUF2502) HGDHCNMN_00745 85643.Tmz1t_3570 3.4e-149 534.6 Rhodocyclales Bacteria 1MXJP@1224,2KZI2@206389,2VNAC@28216,COG1397@1,COG1397@2 NA|NA|NA O ADP-ribosylglycohydrolase HGDHCNMN_00746 748247.AZKH_0199 2.7e-101 375.6 Rhodocyclales phaZ 3.1.1.75 ko:K03932,ko:K05973 ko00650,map00650 R05118 ko00000,ko00001,ko01000 CE1 Bacteria 1MXUI@1224,2KVSX@206389,2VKEH@28216,COG3509@1,COG3509@2 NA|NA|NA Q Esterase PHB depolymerase HGDHCNMN_00747 497321.C664_19690 1.8e-24 119.4 Rhodocyclales phaP Bacteria 1R4SV@1224,2KW96@206389,2VQP2@28216,COG5490@1,COG5490@2 NA|NA|NA S Phasin protein HGDHCNMN_00748 1304883.KI912532_gene1837 1.2e-20 105.9 Rhodocyclales Bacteria 1N6VS@1224,2C84F@1,2KXJN@206389,2VWHA@28216,334ZR@2 NA|NA|NA HGDHCNMN_00749 62928.azo0025 5.4e-69 267.3 Rhodocyclales Bacteria 1NB1B@1224,2KWGT@206389,2VQ0V@28216,COG1853@1,COG1853@2 NA|NA|NA S Flavin reductase like domain HGDHCNMN_00750 29581.BW37_02778 1.3e-33 149.1 Oxalobacteraceae speD GO:0003674,GO:0003824,GO:0004014,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16,4.1.1.50 ko:K00797,ko:K01611 ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100 M00034,M00133 R00178,R01920,R02869,R08359 RC00021,RC00053,RC00299 ko00000,ko00001,ko00002,ko01000 iPC815.YPO3412,iSDY_1059.SDY_0027 Bacteria 1RH88@1224,2VWA1@28216,477GI@75682,COG1586@1,COG1586@2 NA|NA|NA H Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine HGDHCNMN_00752 267608.RSp1295 4.5e-115 421.8 Burkholderiaceae yqxK 3.1.3.97,3.6.4.12 ko:K03657,ko:K07053 ko03420,ko03430,map03420,map03430 R00188,R11188 RC00078 ko00000,ko00001,ko01000,ko03400 Bacteria 1K4MC@119060,1MVED@1224,2VJM0@28216,COG1379@1,COG1379@2 NA|NA|NA S Domain of unknown function (DUF4178) HGDHCNMN_00753 264198.Reut_A3302 1.7e-137 495.7 Burkholderiaceae ydjI Bacteria 1K4JY@119060,1MXTD@1224,2VJ2P@28216,COG4260@1,COG4260@2 NA|NA|NA S SPFH domain-Band 7 family HGDHCNMN_00754 1000565.METUNv1_00153 5.7e-30 137.1 Rhodocyclales yjfL GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K08989 ko00000 Bacteria 1N14W@1224,2KZND@206389,2VUJZ@28216,COG3766@1,COG3766@2 NA|NA|NA S Domain of Unknown Function (DUF350) HGDHCNMN_00755 1120999.JONM01000006_gene2375 2.4e-212 745.0 Neisseriales speE GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.5.1.16 ko:K00797 ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100 M00034,M00133 R01920,R02869,R08359 RC00021,RC00053 ko00000,ko00001,ko00002,ko01000 Bacteria 1QTYC@1224,2KPFS@206351,2VK9Z@28216,COG4262@1,COG4262@2 NA|NA|NA S Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine HGDHCNMN_00756 266264.Rmet_3462 4.6e-158 564.7 Burkholderiaceae Bacteria 1K6PE@119060,1N849@1224,2VJPR@28216,COG1233@1,COG1233@2 NA|NA|NA Q Flavin containing amine oxidoreductase HGDHCNMN_00757 1304883.KI912532_gene1611 6.6e-24 117.1 Rhodocyclales ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1N0PQ@1224,2M03D@206389,2VUBS@28216,COG0226@1,COG0226@2 NA|NA|NA P Part of the ABC transporter complex PstSACB involved in phosphate import HGDHCNMN_00758 765911.Thivi_4159 6.2e-81 308.1 Chromatiales Bacteria 1R1T0@1224,1T59P@1236,1X2VC@135613,COG1024@1,COG1024@2 NA|NA|NA I Enoyl-CoA hydratase HGDHCNMN_00759 765911.Thivi_4164 2.2e-65 256.5 Chromatiales Bacteria 1NRP8@1224,1RX2W@1236,1X0CE@135613,COG0642@1,COG0745@1,COG0745@2,COG0784@1,COG0784@2,COG2198@1,COG2198@2,COG2205@2 NA|NA|NA T Histidine Phosphotransfer domain HGDHCNMN_00761 497321.C664_18939 5.6e-126 457.2 Rhodocyclales folD GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1162 Bacteria 1MWU4@1224,2KUYY@206389,2VI8C@28216,COG0190@1,COG0190@2 NA|NA|NA F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate HGDHCNMN_00762 748247.AZKH_1456 6e-67 260.4 Rhodocyclales purE GO:0003674,GO:0003824,GO:0004638,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016866,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034023,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 5.4.99.18 ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07405 RC01947 ko00000,ko00001,ko00002,ko01000 iETEC_1333.ETEC_0575,iJN746.PP_5336,iPC815.YPO3076,iUTI89_1310.UTI89_C0551 Bacteria 1RCWJ@1224,2KW4U@206389,2VQ1I@28216,COG0041@1,COG0041@2 NA|NA|NA F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) HGDHCNMN_00763 497321.C664_18949 3.8e-178 630.9 Rhodocyclales purK GO:0000166,GO:0003674,GO:0003824,GO:0004638,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016829,GO:0016830,GO:0016831,GO:0016874,GO:0016879,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034028,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.4.18 ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07404 RC01927 ko00000,ko00001,ko00002,ko01000 iECUMN_1333.ECUMN_0562,iYL1228.KPN_00477 Bacteria 1MU70@1224,2KV1J@206389,2VI6V@28216,COG0026@1,COG0026@2 NA|NA|NA F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) HGDHCNMN_00765 1304883.KI912532_gene2754 1.1e-31 143.7 Rhodocyclales 3.4.16.4 ko:K01286 ko00000,ko01000 Bacteria 1P3SQ@1224,2KZDE@206389,2VIDP@28216,COG1680@1,COG1680@2 NA|NA|NA V 6-aminohexanoate-dimer hydrolase HGDHCNMN_00767 748247.AZKH_p0085 3.8e-73 281.6 Rhodocyclales Bacteria 1RHP5@1224,2AM41@1,2KWPH@206389,2VSXQ@28216,31BY6@2 NA|NA|NA S Protein of unknown function (DUF3348) HGDHCNMN_00768 748247.AZKH_p0086 3.2e-203 715.3 Rhodocyclales ko:K03561,ko:K03562 ko01120,map01120 ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 Bacteria 1QVBX@1224,2KV1P@206389,2WGPD@28216,COG0811@1,COG0811@2 NA|NA|NA U Domain of unknown function (DUF802) HGDHCNMN_00769 62928.azo0281 8.2e-90 336.7 Rhodocyclales yiaD_2 ko:K11891 ko02025,ko03070,map02025,map03070 M00334 ko00000,ko00001,ko00002,ko02044 3.A.23.1 Bacteria 1MU4S@1224,2KUZD@206389,2VJJE@28216,COG1360@1,COG1360@2 NA|NA|NA N OmpA family HGDHCNMN_00770 522306.CAP2UW1_0327 2e-36 159.5 Betaproteobacteria Bacteria 1MY6A@1224,2B4YM@1,2VUKQ@28216,31XRK@2 NA|NA|NA S Protein of unknown function (DUF2894) HGDHCNMN_00771 522306.CAP2UW1_2750 9.2e-28 129.0 Betaproteobacteria Bacteria 1N728@1224,2VWXC@28216,COG0526@1,COG0526@2 NA|NA|NA CO Thioredoxin domain HGDHCNMN_00772 1538295.JY96_09340 3.4e-149 534.6 unclassified Burkholderiales ko:K07089 ko00000 Bacteria 1KMDN@119065,1MUN8@1224,2VJC7@28216,COG0701@1,COG0701@2 NA|NA|NA S Predicted permease HGDHCNMN_00773 159087.Daro_2950 9.7e-68 263.1 Rhodocyclales ko:K03088 ko00000,ko03021 Bacteria 1RHI0@1224,2KWKE@206389,2VRKX@28216,COG1595@1,COG1595@2 NA|NA|NA K Belongs to the sigma-70 factor family. ECF subfamily HGDHCNMN_00774 1235457.C404_16155 5.8e-189 667.5 Burkholderiaceae ushA 3.1.3.5,3.6.1.45 ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 Bacteria 1KEVT@119060,1MX03@1224,2VK5J@28216,COG0737@1,COG0737@2 NA|NA|NA F Belongs to the 5'-nucleotidase family HGDHCNMN_00775 305700.B447_03173 3.1e-291 1007.3 Rhodocyclales glmS GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 R00768 RC00010,RC00163,RC02752 ko00000,ko00001,ko01000,ko01002 Bacteria 1MW4K@1224,2KVCK@206389,2VHVY@28216,COG0449@1,COG0449@2 NA|NA|NA M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source HGDHCNMN_00776 62928.azo3637 2.3e-203 714.9 Rhodocyclales glmU GO:0000270,GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006629,GO:0006725,GO:0006793,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009225,GO:0009226,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0018130,GO:0019134,GO:0019438,GO:0030203,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0042546,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046872,GO:0055086,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 M00362 R00416,R05332 RC00002,RC00004,RC00166 ko00000,ko00001,ko00002,ko01000 iECED1_1282.ECED1_4420,iYL1228.KPN_04135 Bacteria 1MUPH@1224,2KVQ1@206389,2VH54@28216,COG1207@1,COG1207@2 NA|NA|NA M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain HGDHCNMN_00777 62928.azo3638 1.4e-214 752.3 Rhodocyclales pta GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747,GO:0050182 1.1.1.40,2.3.1.19,2.3.1.8,4.2.1.55 ko:K00029,ko:K00625,ko:K00634,ko:K13788,ko:K17865 ko00430,ko00620,ko00630,ko00640,ko00650,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00630,map00640,map00650,map00680,map00710,map00720,map01100,map01120,map01200 M00169,M00172,M00357,M00373,M00579 R00216,R00230,R00921,R01174,R03027 RC00004,RC00105,RC00831,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2098,iYO844.BSU24090 Bacteria 1MWPK@1224,2KV8I@206389,2WGKC@28216,COG0280@1,COG0280@2,COG2030@1,COG2030@2 NA|NA|NA CI Bifunctional enoyl-CoA hydratase phosphate acetyltransferase HGDHCNMN_00778 748247.AZKH_4211 2.9e-141 508.4 Rhodocyclales ackA 2.7.2.1 ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00315,R01353 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW61@1224,2KUC3@206389,2VHRC@28216,COG0282@1,COG0282@2 NA|NA|NA H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction HGDHCNMN_00779 159087.Daro_0218 2.9e-260 904.0 Rhodocyclales gltD 1.4.1.13,1.4.1.14 ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 iJN678.gltD,iSB619.SA_RS02450 Bacteria 1MU2H@1224,2KUS9@206389,2VIHR@28216,COG0493@1,COG0493@2 NA|NA|NA C glutamate synthase HGDHCNMN_00780 76114.ebA2252 1.1e-86 326.2 Rhodocyclales gltB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 R00021,R00093,R00114,R00248,R10086 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 Bacteria 1MU7B@1224,2KUPX@206389,2VHUY@28216,COG0067@1,COG0067@2,COG0069@1,COG0069@2,COG0070@1,COG0070@2 NA|NA|NA E glutamate synthase HGDHCNMN_00782 748247.AZKH_0632 2.4e-141 509.2 Rhodocyclales pckG GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0007028,GO:0007154,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009267,GO:0009410,GO:0009605,GO:0009607,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010106,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016020,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019725,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030003,GO:0030145,GO:0030154,GO:0030312,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031668,GO:0031669,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033554,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042592,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0046916,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050792,GO:0050794,GO:0050801,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071496,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0071944,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0075136,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:0098771,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32,4.1.1.49 ko:K01596,ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko03320,ko04068,ko04151,ko04152,ko04910,ko04920,ko04922,ko04931,ko04964,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200,map03320,map04068,map04151,map04152,map04910,map04920,map04922,map04931,map04964 M00003,M00170 R00341,R00431,R00726 RC00002,RC02741 ko00000,ko00001,ko00002,ko01000 Bacteria 1MX3C@1224,2KV5X@206389,2VINZ@28216,COG1274@1,COG1274@2 NA|NA|NA H Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle HGDHCNMN_00783 398578.Daci_2324 1.6e-117 429.1 Comamonadaceae ko:K18336 ko00051,ko01120,map00051,map01120 R10691 RC00326,RC03236 ko00000,ko00001,ko01000 Bacteria 1MUPF@1224,2VI5Z@28216,4AA1T@80864,COG0179@1,COG0179@2 NA|NA|NA Q PFAM fumarylacetoacetate (FAA) hydrolase HGDHCNMN_00784 159087.Daro_3552 5.3e-191 673.7 Rhodocyclales purT GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008776,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016741,GO:0016742,GO:0016772,GO:0016774,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.2 ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 iSDY_1059.SDY_1135 Bacteria 1N3KA@1224,2KV39@206389,2VH4M@28216,COG0027@1,COG0027@2 NA|NA|NA F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate HGDHCNMN_00785 497321.C664_05001 2.5e-240 838.2 Rhodocyclales mutL GO:0000018,GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391 ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 Bacteria 1MV61@1224,2KVF9@206389,2VIBW@28216,COG0323@1,COG0323@2 NA|NA|NA L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex HGDHCNMN_00786 987059.RBXJA2T_16692 8.3e-67 260.4 unclassified Burkholderiales rsuA 5.4.99.19,5.4.99.22 ko:K06178,ko:K06183 ko00000,ko01000,ko03009 Bacteria 1KJ40@119065,1MU6M@1224,2VIXH@28216,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family HGDHCNMN_00787 1123487.KB892839_gene221 2.6e-92 345.9 Rhodocyclales rluF 5.4.99.21 ko:K06182 ko00000,ko01000,ko03009 Bacteria 1MXQE@1224,2KUFI@206389,2VI7P@28216,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family HGDHCNMN_00789 1349767.GJA_2255 6.8e-208 730.7 Oxalobacteraceae Bacteria 1MUNI@1224,2VN34@28216,4762A@75682,COG0784@1,COG0784@2,COG5001@1,COG5001@2 NA|NA|NA T Domain of unknown function (DUF3369) HGDHCNMN_00790 1000565.METUNv1_00644 1.2e-195 689.9 Rhodocyclales smoE ko:K02027,ko:K02030,ko:K10227 ko02010,map02010 M00200,M00207,M00236 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.5,3.A.1.3 Bacteria 1PH3C@1224,2KZIC@206389,2VVZD@28216,COG0834@1,COG0834@2,COG1653@1,COG1653@2 NA|NA|NA ET Bacterial extracellular solute-binding proteins, family 3 HGDHCNMN_00791 1123487.KB892835_gene3464 7.7e-129 467.6 Rhodocyclales Bacteria 1RCM9@1224,2KYBZ@206389,2VMUZ@28216,COG4191@1,COG4191@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_00792 1123487.KB892838_gene3887 1.1e-143 516.2 Rhodocyclales prfB GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02836 ko00000,ko03012 Bacteria 1MUAW@1224,2KUA1@206389,2VJ6C@28216,COG1186@1,COG1186@2 NA|NA|NA J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA HGDHCNMN_00793 522306.CAP2UW1_0061 7.3e-74 284.6 Betaproteobacteria yfiM ko:K05811 ko00000 Bacteria 1QU58@1224,2VQZ5@28216,COG5544@1,COG5544@2 NA|NA|NA S Lipoprotein HGDHCNMN_00794 305700.B447_08368 4.5e-154 551.2 Rhodocyclales Bacteria 1NFW3@1224,2CG46@1,2KVGK@206389,2VN3X@28216,2Z7W3@2 NA|NA|NA HGDHCNMN_00795 305700.B447_08363 2.2e-80 305.4 Rhodocyclales Bacteria 1RCI8@1224,28KTK@1,2KVK3@206389,2VQ6W@28216,2ZAAP@2 NA|NA|NA HGDHCNMN_00796 62928.azo1494 0.0 1198.7 Rhodocyclales Bacteria 1NGZ2@1224,2KUZR@206389,2VIWY@28216,COG1196@1,COG1196@2 NA|NA|NA D SMC domain-containing protein HGDHCNMN_00797 1123367.C666_11925 6.5e-80 304.7 Betaproteobacteria Bacteria 1N426@1224,2DZNC@1,2VVJB@28216,32VEI@2 NA|NA|NA S Protein of unknown function C-terminus (DUF2399) HGDHCNMN_00798 1123487.KB892838_gene3893 3.5e-68 265.4 Rhodocyclales Bacteria 1R6GI@1224,2KWR2@206389,2VM5N@28216,COG2199@1,COG3706@2 NA|NA|NA T diguanylate cyclase HGDHCNMN_00799 305700.B447_08238 6.7e-263 912.9 Rhodocyclales lysS GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006629,GO:0006644,GO:0006650,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009405,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019637,GO:0019752,GO:0030312,GO:0030322,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0042221,GO:0042391,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046471,GO:0046483,GO:0046486,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAF1260.b4129,iECDH1ME8569_1439.ECDH1ME8569_3989,iECW_1372.ECW_m4490,iEcDH1_1363.EcDH1_3862,iJN678.lysS,iJO1366.b4129,iWFL_1372.ECW_m4490 Bacteria 1MX1V@1224,2KVEX@206389,2VH1A@28216,COG1190@1,COG1190@2 NA|NA|NA J Belongs to the class-II aminoacyl-tRNA synthetase family HGDHCNMN_00800 62928.azo0194 5.8e-09 67.4 Rhodocyclales korB ko:K03746 ko00000,ko03036,ko03400 Bacteria 1N801@1224,2KX8I@206389,2VWID@28216,COG2916@1,COG2916@2 NA|NA|NA S DNA-binding protein H-NS HGDHCNMN_00802 1304883.KI912532_gene1542 2.9e-300 1037.7 Rhodocyclales ppsA2 2.7.1.40,2.7.9.2 ko:K00873,ko:K01007 ko00010,ko00230,ko00620,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map00680,map00720,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050,M00173,M00374 R00199,R00200,R00430,R01138,R01858,R02320 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 1Q33X@1224,2KYG2@206389,2VKF9@28216,COG0574@1,COG0574@2,COG3848@1,COG3848@2 NA|NA|NA GT Pyruvate phosphate dikinase, PEP/pyruvate binding domain HGDHCNMN_00803 1179773.BN6_76280 1.1e-16 93.2 Pseudonocardiales 3.2.2.21 ko:K01247 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 2GP69@201174,4DXEY@85010,COG0122@1,COG0122@2 NA|NA|NA L 3-methyladenine DNA glycosylase HGDHCNMN_00804 1005395.CSV86_00252 6.1e-15 86.7 Gammaproteobacteria Bacteria 1R58D@1224,1RYZE@1236,COG4313@1,COG4313@2 NA|NA|NA C Putative MetA-pathway of phenol degradation HGDHCNMN_00805 292415.Tbd_0334 8e-87 327.4 Betaproteobacteria ctaA ko:K02259,ko:K03110 ko00190,ko00860,ko01100,ko01110,ko02020,ko02024,ko03060,ko03070,ko04714,map00190,map00860,map01100,map01110,map02020,map02024,map03060,map03070,map04714 M00154,M00335 R07412 RC00769 ko00000,ko00001,ko00002,ko02044,ko03029 3.A.5.1,3.A.5.2,3.A.5.7,3.D.4.4 Bacteria 1MVJ4@1224,2VJ3C@28216,COG1612@1,COG1612@2 NA|NA|NA O cytochrome oxidase assembly HGDHCNMN_00806 522306.CAP2UW1_4148 9e-103 380.2 unclassified Betaproteobacteria ctaB GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 ko:K02257 ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714 M00154 R07411 RC01786 ko00000,ko00001,ko00002,ko01000,ko01006,ko03029 iJN746.PP_0110 Bacteria 1KQGD@119066,1MW3S@1224,2VHZU@28216,COG0109@1,COG0109@2 NA|NA|NA O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group HGDHCNMN_00807 522306.CAP2UW1_4149 4.3e-29 134.8 Betaproteobacteria VVA1110 Bacteria 1N6R6@1224,2VXI0@28216,COG1999@1,COG1999@2 NA|NA|NA S signal sequence binding HGDHCNMN_00808 159087.Daro_1465 3e-63 248.4 Rhodocyclales surf1 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704,GO:0071944 ko:K14998 ko00000,ko03029 3.D.4.8 Bacteria 1MZUH@1224,2KWKA@206389,2VSAZ@28216,COG3346@1,COG3346@2 NA|NA|NA S SURF1-like protein HGDHCNMN_00809 666681.M301_2285 4.7e-09 66.6 Nitrosomonadales VL23_10685 Bacteria 1NH9B@1224,2EGIJ@1,2KNAK@206350,2W81A@28216,33AAQ@2 NA|NA|NA S Protein of unknown function (DUF2909) HGDHCNMN_00810 522306.CAP2UW1_4152 1.1e-129 469.5 unclassified Betaproteobacteria ctaE GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 1.9.3.1 ko:K02276 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.4,3.D.4.6 iJN678.ctaE Bacteria 1KQK0@119066,1MUCK@1224,2VJAP@28216,COG1845@1,COG1845@2 NA|NA|NA C Cytochrome c oxidase subunit III HGDHCNMN_00811 522306.CAP2UW1_4153 2.4e-53 215.3 unclassified Betaproteobacteria ctaG GO:0008150,GO:0008535,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840 ko:K02258 ko00190,ko01100,ko04714,map00190,map01100,map04714 M00154 ko00000,ko00001,ko00002,ko03029 3.D.4.8 Bacteria 1KQT5@119066,1RDTU@1224,2VHRQ@28216,COG3175@1,COG3175@2 NA|NA|NA O Cytochrome c oxidase assembly protein CtaG/Cox11 HGDHCNMN_00813 159087.Daro_1470 4e-279 966.8 Rhodocyclales 1.9.3.1 ko:K02274 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6 Bacteria 1MU7S@1224,2KVEH@206389,2VHGU@28216,COG0843@1,COG0843@2 NA|NA|NA C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B HGDHCNMN_00814 522306.CAP2UW1_4155 6e-187 660.2 unclassified Betaproteobacteria ctaC GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0040007,GO:0042773,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051704,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 ko:K02275 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 Bacteria 1KQCB@119066,1MWHZ@1224,2VH9M@28216,COG1622@1,COG1622@2,COG2010@1,COG2010@2 NA|NA|NA C Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) HGDHCNMN_00815 522306.CAP2UW1_4156 6.3e-15 87.4 Bacteria Bacteria COG5488@1,COG5488@2 NA|NA|NA S Integral membrane protein (DUF2244) HGDHCNMN_00816 497321.C664_18237 2.3e-70 271.9 Rhodocyclales hyaE GO:0003674,GO:0005048,GO:0005488,GO:0033218,GO:0042277 ko:K03619,ko:K07152 ko00000,ko03029 Bacteria 1RHJ8@1224,2KWGG@206389,2VR3M@28216,COG1999@1,COG1999@2 NA|NA|NA S protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems HGDHCNMN_00817 85643.Tmz1t_1062 3.7e-122 444.5 Rhodocyclales rpoH ko:K03089 ko00000,ko03021 Bacteria 1MVWR@1224,2KUT2@206389,2VI91@28216,COG0568@1,COG0568@2 NA|NA|NA K RNA polymerase sigma HGDHCNMN_00818 159087.Daro_1132 1.3e-56 226.1 Rhodocyclales Bacteria 1RDZ1@1224,2KYQJ@206389,2VRXK@28216,COG0727@1,COG0727@2 NA|NA|NA S Putative zinc- or iron-chelating domain HGDHCNMN_00820 62928.azo0345 2.6e-294 1017.7 Rhodocyclales pcrA 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1MU0G@1224,2KVCG@206389,2VM2H@28216,COG0210@1,COG0210@2 NA|NA|NA L COG0210 Superfamily I DNA and RNA helicases HGDHCNMN_00821 652103.Rpdx1_1185 2e-24 118.6 Proteobacteria Bacteria 1NACU@1224,COG5274@1,COG5274@2 NA|NA|NA CI PFAM cytochrome HGDHCNMN_00822 1304883.KI912532_gene1893 6.4e-115 421.0 Betaproteobacteria Bacteria 1MV9P@1224,2WF2M@28216,COG4097@1,COG4097@2 NA|NA|NA P FAD-binding domain HGDHCNMN_00823 522306.CAP2UW1_2673 9e-15 86.3 Betaproteobacteria Bacteria 1NMIT@1224,2DRFI@1,2VY9W@28216,33BHX@2 NA|NA|NA HGDHCNMN_00824 1123255.JHYS01000017_gene1381 6.9e-26 123.2 Comamonadaceae Bacteria 1N7PZ@1224,2E80B@1,2VVZX@28216,332EM@2,4AG3W@80864 NA|NA|NA HGDHCNMN_00825 85643.Tmz1t_2446 1.5e-55 222.6 Rhodocyclales blc ko:K03098 ko00000,ko04147 Bacteria 1RDAI@1224,2KX4V@206389,2VRSU@28216,COG3040@1,COG3040@2 NA|NA|NA M Lipocalin-like domain HGDHCNMN_00826 159087.Daro_0487 1.7e-125 455.7 Rhodocyclales ycgE ko:K22491 ko00000,ko03000 Bacteria 1R2NF@1224,2KW35@206389,2VJDG@28216,COG0789@1,COG0789@2,COG5012@1,COG5012@2 NA|NA|NA K B12 binding domain HGDHCNMN_00827 159087.Daro_0488 7.6e-84 316.6 Rhodocyclales btuE 1.11.1.9 ko:K00432 ko00480,ko00590,ko04918,map00480,map00590,map04918 R00274,R07034,R07035 RC00011,RC00982 ko00000,ko00001,ko01000 Bacteria 1RDR8@1224,2KWUQ@206389,2VQHV@28216,COG0386@1,COG0386@2 NA|NA|NA O Belongs to the glutathione peroxidase family HGDHCNMN_00828 159087.Daro_0489 1.2e-114 419.5 Rhodocyclales folE2 3.5.4.16 ko:K01495,ko:K09007 ko00790,ko01100,map00790,map01100 M00126,M00841,M00842,M00843 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV1B@1224,2KVNT@206389,2VIC9@28216,COG1469@1,COG1469@2 NA|NA|NA S Converts GTP to 7,8-dihydroneopterin triphosphate HGDHCNMN_00829 159087.Daro_0490 7.2e-210 736.5 Rhodocyclales ko:K06954 ko00000 Bacteria 1MV4Z@1224,2KVDS@206389,2VHCR@28216,COG2907@1,COG2907@2 NA|NA|NA S Flavin containing amine oxidoreductase HGDHCNMN_00830 1304883.KI912532_gene356 1.3e-102 379.4 Rhodocyclales 2.1.1.79 ko:K00574,ko:K09701 ko00000,ko01000 Bacteria 1RC56@1224,2KW5G@206389,2VIZ9@28216,COG3496@1,COG3496@2 NA|NA|NA S Protein of unknown function (DUF1365) HGDHCNMN_00831 1304883.KI912532_gene355 4.8e-176 624.0 Rhodocyclales cfa GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008168,GO:0008610,GO:0008757,GO:0009058,GO:0009059,GO:0009273,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0030312,GO:0032259,GO:0032787,GO:0034645,GO:0042546,GO:0043170,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070589,GO:0071554,GO:0071704,GO:0071766,GO:0071767,GO:0071768,GO:0071840,GO:0071944,GO:0072330,GO:1901576 2.1.1.317,2.1.1.79 ko:K00574,ko:K20238 ko00000,ko01000 Bacteria 1MX3U@1224,2KVAC@206389,2VJ00@28216,COG2230@1,COG2230@2 NA|NA|NA M Cyclopropane fatty acid synthase HGDHCNMN_00832 1304883.KI912532_gene354 2.7e-62 245.0 Rhodocyclales Bacteria 1N0R0@1224,2KX3V@206389,2VUCP@28216,COG3572@1,COG3572@2 NA|NA|NA H Chalcone isomerase-like HGDHCNMN_00833 1304883.KI912532_gene353 1.1e-148 533.1 Rhodocyclales ko:K03292 ko00000 2.A.2 Bacteria 1MVUM@1224,2KVBH@206389,2VI47@28216,COG2211@1,COG2211@2 NA|NA|NA G MFS/sugar transport protein HGDHCNMN_00834 1304883.KI912532_gene352 1.2e-83 315.8 Rhodocyclales PP2730 Bacteria 1RHTE@1224,2ANPA@1,2KWF5@206389,2VRS4@28216,31DNS@2 NA|NA|NA S Protein of unknown function (DUF3833) HGDHCNMN_00835 159087.Daro_0496 8.4e-102 376.7 Rhodocyclales sdh Bacteria 1R735@1224,2KW32@206389,2VH63@28216,COG0300@1,COG0300@2 NA|NA|NA S Belongs to the short-chain dehydrogenases reductases (SDR) family HGDHCNMN_00836 1304883.KI912532_gene350 4.8e-43 180.6 Rhodocyclales 5.3.3.1 ko:K01822,ko:K21972 ko00140,ko00984,ko01100,ko01120,map00140,map00984,map01100,map01120 M00107,M00110 R01837,R02216,R02499,R02840,R03327,R04163,R04678,R04849,R09955 RC00146,RC00762 ko00000,ko00001,ko00002,ko01000,ko03000 Bacteria 1MZS5@1224,2KWYK@206389,2VSD2@28216,COG3631@1,COG3631@2 NA|NA|NA S SnoaL-like domain HGDHCNMN_00837 62928.azo2484 3.9e-146 524.6 Rhodocyclales ko:K07814 ko00000,ko02022 Bacteria 1MUB8@1224,2KUMQ@206389,2VH1F@28216,COG3437@1,COG3437@2 NA|NA|NA T response regulator HGDHCNMN_00838 1000565.METUNv1_03417 1.6e-59 236.9 Rhodocyclales barA 2.7.13.3 ko:K11527 ko00000,ko01000,ko01001,ko02022 Bacteria 1NRP8@1224,2KVVC@206389,2VGZQ@28216,COG0642@1,COG0642@2,COG2205@2,COG5002@1,COG5002@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_00839 1134912.AJTV01000032_gene2194 2.9e-07 62.8 Methylocystaceae Bacteria 1NM0S@1224,2DPW6@1,2VD7R@28211,333NE@2,3704M@31993 NA|NA|NA HGDHCNMN_00841 1366050.N234_17020 2.1e-111 408.7 Burkholderiaceae lgt GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009058,GO:0009059,GO:0009249,GO:0009898,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0040007,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.1.1.199 ko:K03438,ko:K13292 ko00000,ko01000,ko03009 Bacteria 1K2AG@119060,1MVE3@1224,2VHEW@28216,COG0682@1,COG0682@2 NA|NA|NA M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins HGDHCNMN_00842 76114.ebA177 1.2e-58 233.4 Rhodocyclales Bacteria 1RG86@1224,29TFP@1,2KWFR@206389,2VS6R@28216,30ENV@2 NA|NA|NA HGDHCNMN_00844 748247.AZKH_2214 1.7e-92 346.7 Betaproteobacteria zraS GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0010288,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031226,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071241,GO:0071248,GO:0071284,GO:0071294,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 ko:K07709 ko02020,map02020 M00499 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1R8JK@1224,2WEZZ@28216,COG3290@1,COG3290@2,COG4191@1,COG4191@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_00845 864051.BurJ1DRAFT_3978 4.3e-128 464.9 unclassified Burkholderiales atoC ko:K02481,ko:K07714 ko02020,map02020 M00500 ko00000,ko00001,ko00002,ko02022 Bacteria 1KK5X@119065,1MU0N@1224,2VHSB@28216,COG2204@1,COG2204@2 NA|NA|NA T Response regulator receiver HGDHCNMN_00846 62928.azo0604 3.3e-23 114.4 Rhodocyclales Bacteria 1NH6U@1224,2KZ0H@206389,2VXW0@28216,COG4392@1,COG4392@2 NA|NA|NA S Branched-chain amino acid transport protein (AzlD) HGDHCNMN_00847 62928.azo0603 4.3e-68 264.6 Rhodocyclales azlC Bacteria 1MVGN@1224,2KZSS@206389,2VPFP@28216,COG1296@1,COG1296@2 NA|NA|NA E branched-chain amino acid permease (azaleucine resistance) HGDHCNMN_00848 757424.Hsero_2555 3.4e-88 331.6 Oxalobacteraceae ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 1R7DC@1224,2VP65@28216,477XA@75682,COG0834@1,COG0834@2 NA|NA|NA ET Periplasmic component of amino acid ABC-type transporter signal transduction system HGDHCNMN_00849 159087.Daro_3975 4.5e-99 368.6 Rhodocyclales Bacteria 1RGCV@1224,2KVQG@206389,2WGZP@28216,COG2199@1,COG2199@2,COG3614@1,COG3614@2 NA|NA|NA T CHASE HGDHCNMN_00850 452637.Oter_1144 3.5e-40 171.8 Opitutae Bacteria 3K7YJ@414999,46T5E@74201,COG2860@1,COG2860@2 NA|NA|NA S UPF0126 domain HGDHCNMN_00851 1121116.KB894769_gene1310 8.1e-51 206.5 Comamonadaceae XK27_07670 ko:K07397 ko00000 Bacteria 1N2BT@1224,2VU1M@28216,4AF4W@80864,COG1765@1,COG1765@2 NA|NA|NA O OsmC-like protein HGDHCNMN_00852 305700.B447_04023 3.1e-111 408.3 Rhodocyclales Z012_04450 ko:K06911 ko00000 Bacteria 1MWIP@1224,2KWM7@206389,2VHUJ@28216,COG1741@1,COG1741@2 NA|NA|NA S Belongs to the pirin family HGDHCNMN_00853 522306.CAP2UW1_4286 1.3e-117 429.5 Betaproteobacteria dedA_2 Bacteria 1R6F1@1224,2VMW2@28216,COG0586@1,COG0586@2,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese domain protein HGDHCNMN_00855 748247.AZKH_0537 2.5e-100 372.1 Rhodocyclales ycbK Bacteria 1MYHQ@1224,2KVWH@206389,2VJMU@28216,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family HGDHCNMN_00856 76114.ebA6442 2e-25 121.3 Rhodocyclales Bacteria 1N728@1224,2KX1D@206389,2VU78@28216,COG0526@1,COG0526@2 NA|NA|NA CO Thioredoxin domain HGDHCNMN_00857 76114.ebA6443 8.7e-196 689.9 Rhodocyclales ko:K07089 ko00000 Bacteria 1MUN8@1224,2KVB8@206389,2VNTF@28216,COG0701@1,COG0701@2 NA|NA|NA S Predicted permease HGDHCNMN_00858 522306.CAP2UW1_1795 2.4e-41 175.3 unclassified Betaproteobacteria ko:K09796 ko00000,ko03110 Bacteria 1KR0V@119066,1MZ3M@1224,2VTY7@28216,COG2847@1,COG2847@2 NA|NA|NA S Copper chaperone PCu(A)C HGDHCNMN_00859 365044.Pnap_4012 7.5e-22 109.8 Comamonadaceae Bacteria 1MZCY@1224,2VV9D@28216,4AG28@80864,COG3339@1,COG3339@2 NA|NA|NA S Protein of unknown function (DUF1232) HGDHCNMN_00860 305700.B447_14179 2.5e-79 302.0 Rhodocyclales Bacteria 1MWER@1224,2KW1J@206389,2VN6D@28216,COG0745@1,COG0745@2 NA|NA|NA K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain HGDHCNMN_00861 159087.Daro_0225 2e-193 682.6 Rhodocyclales Bacteria 1RCM9@1224,2KUYQ@206389,2VHTK@28216,COG0784@1,COG0784@2,COG4191@1,COG4191@2 NA|NA|NA T COG0642 Signal transduction histidine kinase HGDHCNMN_00862 62928.azo1922 6.4e-110 403.7 Rhodocyclales etfB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 ko:K03521 ko00000 Bacteria 1MVH6@1224,2KUTX@206389,2VHXJ@28216,COG2086@1,COG2086@2 NA|NA|NA C Electron transfer flavoprotein HGDHCNMN_00863 159087.Daro_1212 4.9e-128 464.2 Rhodocyclales etfA GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 ko:K03522 ko00000,ko04147 Bacteria 1MUFI@1224,2KUDQ@206389,2VI6W@28216,COG2025@1,COG2025@2 NA|NA|NA C Electron transfer flavoprotein alpha subunit HGDHCNMN_00864 1121035.AUCH01000013_gene3102 7.3e-221 773.5 Rhodocyclales acd ko:K20035 ko00920,map00920 R11130 RC03363 ko00000,ko00001,ko01000 Bacteria 1MU20@1224,2KUFZ@206389,2VGZD@28216,COG1960@1,COG1960@2 NA|NA|NA C COG1960 Acyl-CoA dehydrogenases HGDHCNMN_00865 748247.AZKH_0914 2.3e-70 272.3 Rhodocyclales hemD GO:0003674,GO:0003824,GO:0004852,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,2.5.1.61,4.2.1.75 ko:K01719,ko:K01749,ko:K02496,ko:K13542,ko:K13543 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R00084,R03165,R03194 RC00003,RC00871,RC01861,RC02317 ko00000,ko00001,ko00002,ko01000 iJN746.PP_0187,iSBO_1134.SBO_3815 Bacteria 1MWZD@1224,2KVD0@206389,2VRU9@28216,COG1587@1,COG1587@2 NA|NA|NA H Uroporphyrinogen-III synthase HemD HGDHCNMN_00866 159087.Daro_3672 5.5e-78 298.1 Rhodocyclales hemX 2.1.1.107,4.2.1.75 ko:K02496,ko:K06313,ko:K13543 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R03165,R03194 RC00003,RC00871,RC01861 ko00000,ko00001,ko00002,ko01000 iAF1260.b3803,iBWG_1329.BWG_3482,iECDH1ME8569_1439.ECDH1ME8569_3682,iECUMN_1333.ECUMN_4327,iECs_1301.ECs4733,iEcDH1_1363.EcDH1_4176,iJO1366.b3803,iJR904.b3803,iPC815.YPO3851,iUMN146_1321.UM146_19140,iY75_1357.Y75_RS18060,iZ_1308.Z5317 Bacteria 1MY3A@1224,2KW9U@206389,2VMG1@28216,COG2959@1,COG2959@2 NA|NA|NA H HemX, putative uroporphyrinogen-III C-methyltransferase HGDHCNMN_00867 62928.azo0996 4.1e-103 381.7 Rhodocyclales hemY GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02498 ko00000 Bacteria 1MU7A@1224,2KVAI@206389,2VK6P@28216,COG3071@1,COG3071@2 NA|NA|NA H enzyme of heme biosynthesis HGDHCNMN_00868 522306.CAP2UW1_4457 1.1e-87 329.3 unclassified Betaproteobacteria ahpC GO:0003674,GO:0003824,GO:0004601,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009321,GO:0009605,GO:0009636,GO:0009970,GO:0009987,GO:0009991,GO:0010033,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0019725,GO:0030003,GO:0031667,GO:0031668,GO:0031669,GO:0032843,GO:0032991,GO:0033194,GO:0033195,GO:0033212,GO:0033214,GO:0033554,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071496,GO:0097237,GO:0098754,GO:0098771,GO:0098869,GO:1901700,GO:1902494,GO:1990204,GO:1990748 1.11.1.15 ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 Bacteria 1KQ43@119066,1MWPY@1224,2VI7T@28216,COG0450@1,COG0450@2 NA|NA|NA O Redoxin HGDHCNMN_00869 743721.Psesu_2386 1.1e-220 772.7 Xanthomonadales ahpF GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008785,GO:0009321,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363,GO:1902494,GO:1990204 ko:K03387 ko00000,ko01000 Bacteria 1MUKD@1224,1RNC7@1236,1X4HZ@135614,COG3634@1,COG3634@2 NA|NA|NA O Alkyl hydroperoxide reductase HGDHCNMN_00871 7213.XP_004528229.1 5.5e-08 65.5 Diptera Arthropoda 38CSD@33154,3BAX6@33208,3CW8X@33213,3SFZS@50557,41UGJ@6656,44Z9M@7147,COG0415@1,COG1053@1,COG4770@1,KOG0133@2759,KOG0238@2759,KOG2403@2759 NA|NA|NA C Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) HGDHCNMN_00872 85643.Tmz1t_2546 4.5e-30 136.7 Rhodocyclales sdhE GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006105,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016043,GO:0016999,GO:0017013,GO:0017144,GO:0018065,GO:0018293,GO:0019538,GO:0019752,GO:0022607,GO:0034552,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0043648,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0045333,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072350,GO:1901564 1.3.5.1,1.3.5.4 ko:K00240,ko:K09159 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000,ko02048 Bacteria 1PV72@1224,2KXIA@206389,2VWIR@28216,COG2938@1,COG2938@2 NA|NA|NA S Flavinator of succinate dehydrogenase HGDHCNMN_00873 62928.azo1552 1.1e-127 462.6 Rhodocyclales sdhB GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0022904,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 e_coli_core.b0724,iAF1260.b0724,iBWG_1329.BWG_0583,iEC042_1314.EC042_0742,iECDH10B_1368.ECDH10B_0791,iECDH1ME8569_1439.ECDH1ME8569_0683,iECUMN_1333.ECUMN_0802,iEcDH1_1363.EcDH1_2911,iJO1366.b0724,iJR904.b0724,iY75_1357.Y75_RS03765 Bacteria 1MVHS@1224,2KUNB@206389,2VIKC@28216,COG0479@1,COG0479@2 NA|NA|NA C Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family HGDHCNMN_00874 62928.azo1551 0.0 1112.1 Rhodocyclales sdhA GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0043436,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071704,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0072350,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 iE2348C_1286.E2348C_0603,iJN746.PP_4191,iPC815.YPO1111 Bacteria 1MU5M@1224,2KV73@206389,2VHM6@28216,COG1053@1,COG1053@2 NA|NA|NA C Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily HGDHCNMN_00875 1000565.METUNv1_01115 3.8e-41 174.1 Rhodocyclales sdhD GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0016999,GO:0017004,GO:0017144,GO:0019752,GO:0020037,GO:0022607,GO:0022900,GO:0032991,GO:0034622,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0065003,GO:0070469,GO:0070470,GO:0071704,GO:0071840,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 ko:K00242 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173 R02164 RC00045 ko00000,ko00001,ko00002 e_coli_core.b0722,iAF1260.b0722,iAPECO1_1312.APECO1_1356,iB21_1397.B21_00671,iBWG_1329.BWG_0581,iE2348C_1286.E2348C_0602,iEC042_1314.EC042_0740,iECABU_c1320.ECABU_c07680,iECBD_1354.ECBD_2938,iECB_1328.ECB_00682,iECDH10B_1368.ECDH10B_0789,iECDH1ME8569_1439.ECDH1ME8569_0681,iECD_1391.ECD_00682,iECED1_1282.ECED1_0692,iECIAI1_1343.ECIAI1_0696,iECIAI39_1322.ECIAI39_0680,iECNA114_1301.ECNA114_0658,iECO103_1326.ECO103_0716,iECO111_1330.ECO111_0739,iECO26_1355.ECO26_0783,iECOK1_1307.ECOK1_0722,iECP_1309.ECP_0734,iECS88_1305.ECS88_0748,iECSE_1348.ECSE_0782,iECSF_1327.ECSF_0655,iECUMN_1333.ECUMN_0800,iECW_1372.ECW_m0777,iEKO11_1354.EKO11_3157,iETEC_1333.ETEC_0733,iEcDH1_1363.EcDH1_2913,iEcE24377_1341.EcE24377A_0749,iEcHS_1320.EcHS_A0770,iEcSMS35_1347.EcSMS35_0735,iEcolC_1368.EcolC_2933,iJO1366.b0722,iJR904.b0722,iLF82_1304.LF82_2100,iNRG857_1313.NRG857_03215,iSBO_1134.SBO_0580,iSDY_1059.SDY_0660,iSFV_1184.SFV_0613,iSF_1195.SF0575,iSFxv_1172.SFxv_0634,iSSON_1240.SSON_0673,iS_1188.S0588,iUMN146_1321.UM146_14010,iUMNK88_1353.UMNK88_758,iUTI89_1310.UTI89_C0718,iWFL_1372.ECW_m0777,iY75_1357.Y75_RS03755,ic_1306.c0800 Bacteria 1MZR9@1224,2KWK5@206389,2VSJN@28216,COG2142@1,COG2142@2 NA|NA|NA C Succinate dehydrogenase, hydrophobic HGDHCNMN_00876 748247.AZKH_1818 2.2e-42 178.3 Rhodocyclales sdhC GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0008177,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0016635,GO:0017004,GO:0020037,GO:0022607,GO:0022900,GO:0034622,GO:0043933,GO:0044085,GO:0044237,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0048038,GO:0048039,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0097159,GO:1901363 ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002 iSF_1195.SF0576,iS_1188.S0589 Bacteria 1RIGZ@1224,2KWKD@206389,2VSEG@28216,COG2009@1,COG2009@2 NA|NA|NA C COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit HGDHCNMN_00877 748247.AZKH_1817 2.9e-115 421.4 Rhodocyclales frlR ko:K03710 ko00000,ko03000 Bacteria 1MUEB@1224,2KUI0@206389,2VJ6N@28216,COG2188@1,COG2188@2 NA|NA|NA K transcriptional HGDHCNMN_00878 62928.azo1547 2.7e-172 611.3 Rhodocyclales mdh GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0030312,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV57@1224,2KUMR@206389,2VHC8@28216,COG0039@1,COG0039@2 NA|NA|NA C Catalyzes the reversible oxidation of malate to oxaloacetate HGDHCNMN_00879 748247.AZKH_p0372 1.7e-163 582.0 Rhodocyclales citE 4.1.3.25,4.1.3.34 ko:K01644,ko:K18292 ko00660,ko01100,ko02020,map00660,map01100,map02020 R00237,R00362 RC00067,RC00502,RC01118,RC01205 ko00000,ko00001,ko01000 Bacteria 1Q91U@1224,2KUFC@206389,2VJJY@28216,COG2301@1,COG2301@2 NA|NA|NA G Belongs to the HpcH HpaI aldolase family HGDHCNMN_00880 279714.FuraDRAFT_3022 2.1e-206 724.9 Neisseriales 1.13.12.16 ko:K00459 ko00910,map00910 R00025 RC02541,RC02759 ko00000,ko00001,ko01000 Bacteria 1N52W@1224,2KPG5@206351,2VJ45@28216,COG2070@1,COG2070@2 NA|NA|NA S 2-nitropropane dioxygenase HGDHCNMN_00881 748247.AZKH_1813 2.2e-85 322.4 Rhodocyclales 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 Bacteria 1NAJG@1224,2KWRJ@206389,2VJW8@28216,COG1716@1,COG1716@2,COG2114@1,COG2114@2 NA|NA|NA T Forkhead associated domain HGDHCNMN_00882 497321.C664_01815 3.3e-95 355.1 Rhodocyclales estA ko:K01066 ko00000,ko01000 Bacteria 1NEXK@1224,2KWFY@206389,2VJSB@28216,COG0657@1,COG0657@2 NA|NA|NA I Carboxylesterase family HGDHCNMN_00884 305700.B447_18703 2.4e-136 491.9 Rhodocyclales queA GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0050896,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29,2.4.99.17 ko:K00773,ko:K07568 R03789,R10209 RC00063 ko00000,ko01000,ko03016 Bacteria 1MUH3@1224,2KVHN@206389,2VHJF@28216,COG0809@1,COG0809@2 NA|NA|NA F Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) HGDHCNMN_00885 497321.C664_18402 1.1e-169 602.8 Rhodocyclales tgt GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0008479,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 ko:K00773 R03789,R10209 RC00063 ko00000,ko01000,ko03016 iECW_1372.ECW_m0475,iWFL_1372.ECW_m0475 Bacteria 1MUCA@1224,2KUHH@206389,2VIRX@28216,COG0343@1,COG0343@2 NA|NA|NA F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) HGDHCNMN_00886 76114.ebA4449 3e-117 428.3 Rhodocyclales ribF GO:0003674,GO:0003824,GO:0003919,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008531,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0044237,GO:0070566 2.7.1.26,2.7.7.2 ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00161,R00549 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 iETEC_1333.ETEC_0025,iJN746.PP_0602 Bacteria 1MV9I@1224,2KVAZ@206389,2VHIP@28216,COG0196@1,COG0196@2 NA|NA|NA H Belongs to the ribF family HGDHCNMN_00888 1454004.AW11_02660 4.8e-112 411.0 Betaproteobacteria pepD GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0009056,GO:0009987,GO:0016787,GO:0016805,GO:0019538,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0070573,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 ko:K01270 ko00480,ko01100,map00480,map01100 R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 iPC815.YPO3230,iSBO_1134.SBO_0243 Bacteria 1MUWK@1224,2VHR4@28216,COG2195@1,COG2195@2 NA|NA|NA E aminoacyl-histidine dipeptidase HGDHCNMN_00889 1120999.JONM01000008_gene1946 5e-101 374.8 Betaproteobacteria Bacteria 1MVK5@1224,2WF1X@28216,COG2133@1,COG2133@2 NA|NA|NA G Glucose / Sorbosone dehydrogenase HGDHCNMN_00890 748247.AZKH_3024 3.9e-244 850.5 Rhodocyclales peaE 1.2.1.39 ko:K00146 ko00360,ko00643,ko01100,ko01120,map00360,map00643,map01100,map01120 R02536 RC00080 ko00000,ko00001,ko01000 iJN746.PP_3463 Bacteria 1MU1V@1224,2KYF2@206389,2VHNV@28216,COG1012@1,COG1012@2 NA|NA|NA C Aldehyde dehydrogenase family HGDHCNMN_00891 62928.azo2251 1.4e-46 192.6 Rhodocyclales Bacteria 1N6YZ@1224,2KYRQ@206389,2VU5M@28216,COG4103@1,COG4103@2 NA|NA|NA S Tellurite resistance protein TerB HGDHCNMN_00892 748247.AZKH_3026 4e-24 119.0 Rhodocyclales ycf48 Bacteria 1RCNG@1224,2KY5K@206389,2WFGN@28216,COG4447@1,COG4447@2 NA|NA|NA S Photosynthesis system II assembly factor YCF48 HGDHCNMN_00893 62928.azo2253 0.0 1345.5 Rhodocyclales ko:K07003 ko00000 Bacteria 1MUE1@1224,2KXRI@206389,2VJ61@28216,COG1033@1,COG1033@2 NA|NA|NA S MMPL family HGDHCNMN_00894 62928.azo2254 1.1e-261 909.1 Rhodocyclales Bacteria 1MXEB@1224,2KY1Z@206389,2VPRW@28216,COG3203@1,COG3203@2 NA|NA|NA M Protein of unknown function (DUF1302) HGDHCNMN_00895 748247.AZKH_3029 2.1e-215 755.0 Rhodocyclales Bacteria 1MXTF@1224,28H52@1,2KXUQ@206389,2VJJ3@28216,2Z7HQ@2 NA|NA|NA S Protein of unknown function (DUF1329) HGDHCNMN_00896 62928.azo2256 4.6e-39 167.5 Betaproteobacteria Bacteria 1N8E4@1224,2VWFV@28216,COG2010@1,COG2010@2 NA|NA|NA C Cytochrome c HGDHCNMN_00897 526227.Mesil_2783 4.6e-21 107.8 Deinococcus-Thermus Bacteria 1WJSY@1297,COG2010@1,COG2010@2 NA|NA|NA C PFAM Cytochrome c, class I HGDHCNMN_00898 62928.azo2257 5e-85 320.5 Rhodocyclales aauA 1.4.9.1,1.4.9.2 ko:K13371,ko:K15228 ko00350,ko00360,ko00680,ko00950,ko01100,ko01110,ko01120,map00350,map00360,map00680,map00950,map01100,map01110,map01120 R00606,R02382,R02612,R04300 RC00062,RC00189 ko00000,ko00001,ko01000 Bacteria 1RD5G@1224,28V8Y@1,2KYYG@206389,2VS15@28216,2ZHBX@2 NA|NA|NA C Methylamine dehydrogenase, L chain HGDHCNMN_00899 62928.azo2258 3.3e-85 321.2 Rhodocyclales Bacteria 1R3WA@1224,2KZ33@206389,2VQKN@28216,COG0526@1,COG0526@2 NA|NA|NA CO AhpC/TSA family HGDHCNMN_00900 62928.azo2259 3.5e-65 254.6 Betaproteobacteria mauE Bacteria 1QUTX@1224,2DNZS@1,2WGQ5@28216,32ZYX@2 NA|NA|NA S Methylamine utilisation protein MauE HGDHCNMN_00901 62928.azo2260 1.5e-142 512.7 Rhodocyclales mauB GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.4.9.1,1.4.9.2 ko:K13372,ko:K15229 ko00350,ko00360,ko00680,ko00950,ko01100,ko01110,ko01120,map00350,map00360,map00680,map00950,map01100,map01110,map01120 R00606,R02382,R02612,R04300 RC00062,RC00189 ko00000,ko00001,ko01000 Bacteria 1R8X0@1224,2KZ29@206389,2VNTY@28216,COG3391@1,COG3391@2 NA|NA|NA S Methylamine dehydrogenase heavy chain (MADH) HGDHCNMN_00902 62928.azo2261 2.7e-108 398.7 Rhodocyclales ko:K04033 ko00000,ko03000 Bacteria 1Q3UX@1224,2KWHG@206389,2VT4I@28216,COG2207@1,COG2207@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_00903 159087.Daro_1000 3.3e-201 708.4 Rhodocyclales acoR ko:K21405 ko00000,ko03000 Bacteria 1NRG5@1224,2KV0U@206389,2VICI@28216,COG3284@1,COG3284@2 NA|NA|NA K Transcriptional activator of acetoin glycerol metabolism HGDHCNMN_00904 62928.azo2933 1.3e-53 216.1 Rhodocyclales exaB ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 Bacteria 1RH1S@1224,2KWMS@206389,2VQ9Y@28216,COG2010@1,COG2010@2 NA|NA|NA C COG2010 Cytochrome c, mono- and diheme variants HGDHCNMN_00905 159087.Daro_1002 1.2e-85 323.2 Rhodocyclales pedG ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 1RIGN@1224,2KWHJ@206389,2VMMR@28216,COG0834@1,COG0834@2 NA|NA|NA ET Bacterial extracellular solute-binding proteins, family 3 HGDHCNMN_00906 1247726.MIM_c14420 3.3e-23 115.9 Alcaligenaceae Bacteria 1MVXR@1224,2VKJ9@28216,3T6IK@506,COG3391@1,COG3391@2 NA|NA|NA S 40-residue yvtn family beta-propeller repeat protein HGDHCNMN_00907 1123367.C666_14225 1.3e-29 135.6 Rhodocyclales nirM ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 Bacteria 1N6UN@1224,2KX86@206389,2VW1Y@28216,COG4654@1,COG4654@2 NA|NA|NA C Cytochrome c HGDHCNMN_00908 269796.Rru_A0932 1.6e-138 500.0 Rhodospirillales ko:K21405 ko00000,ko03000 Bacteria 1NRG5@1224,2JR01@204441,2TR0H@28211,COG3284@1,COG3284@2 NA|NA|NA KQ GAF modulated sigma54 specific transcriptional regulator, Fis family HGDHCNMN_00911 1123367.C666_03140 4.2e-257 893.6 Rhodocyclales cydA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iPC815.YPO1117,iSBO_1134.SBO_2253,iSFxv_1172.SFxv_0621,iS_1188.S0577,iSbBS512_1146.SbBS512_E2337 Bacteria 1MV60@1224,2KVQY@206389,2VHFR@28216,COG1271@1,COG1271@2 NA|NA|NA C Cytochrome bd-type quinol oxidase, subunit 1 HGDHCNMN_00912 305700.B447_01396 5.6e-166 590.5 Rhodocyclales cydB GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iECABU_c1320.ECABU_c10120,iLF82_1304.LF82_0101,iNRG857_1313.NRG857_04455,iPC815.YPO1118,iYO844.BSU38750,ic_1306.c1120 Bacteria 1MURP@1224,2KVCB@206389,2VHSQ@28216,COG1294@1,COG1294@2 NA|NA|NA C oxidase, subunit HGDHCNMN_00913 1123367.C666_03130 1.7e-07 60.8 Betaproteobacteria ybgT GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0019867,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0071944 1.10.3.14 ko:K00424 ko00190,ko02020,map00190,map02020 M00153 ko00000,ko00001,ko01000 3.D.4.3 Bacteria 1NHAG@1224,2VYC0@28216,COG4890@1,COG4890@2 NA|NA|NA S Cyd operon protein YbgT HGDHCNMN_00914 1123367.C666_14475 3.8e-27 127.9 Rhodocyclales yjbI ko:K06886 ko00000 Bacteria 1RH21@1224,2KWMV@206389,2VSUJ@28216,COG2346@1,COG2346@2 NA|NA|NA S Bacterial-like globin HGDHCNMN_00915 420662.Mpe_A1833 1.4e-18 98.6 unclassified Burkholderiales Bacteria 1KP39@119065,1N87C@1224,2E43A@1,2VYDQ@28216,32YZN@2 NA|NA|NA S Cyd operon protein YbgE (Cyd_oper_YbgE) HGDHCNMN_00916 1323663.AROI01000010_gene3373 1.9e-71 275.4 Gammaproteobacteria Bacteria 1RDYR@1224,1S42J@1236,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese-like HGDHCNMN_00917 85643.Tmz1t_2701 3.1e-122 444.9 Rhodocyclales Bacteria 1MWSU@1224,2KZAS@206389,2VHP3@28216,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family HGDHCNMN_00918 159087.Daro_1022 1.7e-34 152.1 Rhodocyclales ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 Bacteria 1N457@1224,2KX9J@206389,2VVMH@28216,COG4654@1,COG4654@2 NA|NA|NA C Cytochrome c HGDHCNMN_00920 62928.azo2971 1.5e-106 393.3 Rhodocyclales 2.7.13.1,2.7.13.3 ko:K05962,ko:K07675 ko02020,map02020 M00473 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1RAB6@1224,2KW3N@206389,2VQT9@28216,COG4585@1,COG4585@2 NA|NA|NA T Histidine kinase HGDHCNMN_00923 1304883.KI912532_gene1793 3.9e-68 265.4 Rhodocyclales czcB ko:K15727 ko00000,ko02000 8.A.1.2.1 Bacteria 1QN99@1224,2KWDC@206389,2VQR3@28216,COG0845@1,COG0845@2 NA|NA|NA M Barrel-sandwich domain of CusB or HlyD membrane-fusion HGDHCNMN_00924 159087.Daro_2801 0.0 1434.5 Rhodocyclales cznA ko:K07239,ko:K07787,ko:K15726 ko02020,map02020 ko00000,ko00001,ko02000 2.A.6.1,2.A.6.1.2,2.A.6.1.4 Bacteria 1NUIV@1224,2KVY2@206389,2VHCZ@28216,COG3696@1,COG3696@2 NA|NA|NA P AcrB/AcrD/AcrF family HGDHCNMN_00925 1121035.AUCH01000003_gene1390 1.2e-17 95.9 Rhodocyclales Bacteria 1PWXV@1224,2EQBS@1,2KXME@206389,2VXTI@28216,30WRH@2 NA|NA|NA S Protein of unknown function (DUF3240) HGDHCNMN_00926 159087.Daro_2803 2.1e-97 362.8 Rhodocyclales Bacteria 1R9PU@1224,2KW3Y@206389,2VPEH@28216,COG1538@1,COG1538@2 NA|NA|NA MU Outer membrane efflux protein HGDHCNMN_00927 637910.ROD_04581 2.9e-26 124.8 Citrobacter ko:K06996 ko00000 Bacteria 1N7Q5@1224,1SCXZ@1236,3WYDS@544,COG3324@1,COG3324@2 NA|NA|NA S Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HGDHCNMN_00928 62928.azo3078 3.3e-60 238.4 Rhodocyclales MA20_18740 Bacteria 1MXS8@1224,2KWF0@206389,2VP6N@28216,COG2378@1,COG2378@2 NA|NA|NA K WYL domain HGDHCNMN_00929 1095769.CAHF01000005_gene1494 5.8e-33 147.1 Oxalobacteraceae ko:K06940 ko00000 Bacteria 1N027@1224,2WAHJ@28216,478A4@75682,COG0727@1,COG0727@2 NA|NA|NA S Putative zinc- or iron-chelating domain HGDHCNMN_00930 62928.azo2080 2e-216 758.4 Rhodocyclales thrC 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUWQ@1224,2KUMA@206389,2VHR6@28216,COG0498@1,COG0498@2 NA|NA|NA E Threonine synthase HGDHCNMN_00931 1304883.KI912532_gene2567 2.9e-66 259.2 Rhodocyclales Bacteria 1RF11@1224,28Q1D@1,2KYKA@206389,2VQZQ@28216,2ZCJS@2 NA|NA|NA HGDHCNMN_00932 159087.Daro_4192 6.9e-98 364.4 Rhodocyclales ko:K07168 ko00000 Bacteria 1MXJG@1224,2KWAQ@206389,2VJU5@28216,COG3448@1,COG3448@2 NA|NA|NA T HPP family HGDHCNMN_00933 1304883.KI912532_gene2568 1e-38 165.6 Rhodocyclales Bacteria 1N4MS@1224,2KXFV@206389,2VU7H@28216,COG4309@1,COG4309@2 NA|NA|NA S Uncharacterized conserved protein (DUF2249) HGDHCNMN_00934 477228.YO5_10935 7.2e-236 822.8 Pseudomonas stutzeri group Bacteria 1N2H9@1224,1RYEY@1236,1Z2HH@136846,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family HGDHCNMN_00935 477228.YO5_10930 7.1e-35 152.9 Gammaproteobacteria Bacteria 1PSYU@1224,1SIG7@1236,COG3311@1,COG3311@2 NA|NA|NA K Helix-turn-helix domain HGDHCNMN_00936 1117943.SFHH103_04048 6.4e-104 383.6 Alphaproteobacteria 2.1.1.72 ko:K03427 ko00000,ko01000,ko02048 Bacteria 1RETJ@1224,2U97M@28211,COG0286@1,COG0286@2 NA|NA|NA V site-specific DNA-methyltransferase (adenine-specific) activity HGDHCNMN_00937 1117943.SFHH103_04047 1.8e-57 229.2 Alphaproteobacteria Bacteria 1NAEG@1224,2E5W0@1,2UKG5@28211,330K2@2 NA|NA|NA S Domain of unknown function (DUF4433) HGDHCNMN_00939 1304883.KI912532_gene1768 9.7e-81 306.6 Rhodocyclales yccA ko:K06890,ko:K19416 M00742 ko00000,ko00002,ko02000 1.A.14.2.1 Bacteria 1MU69@1224,2KVW9@206389,2VKZV@28216,COG0670@1,COG0670@2 NA|NA|NA S Inhibitor of apoptosis-promoting Bax1 HGDHCNMN_00940 76114.ebA771 2.9e-182 644.8 Rhodocyclales rlmD GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070041,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.190 ko:K03215 ko00000,ko01000,ko03009 Bacteria 1MV3A@1224,2KVES@206389,2VHJ8@28216,COG2265@1,COG2265@2 NA|NA|NA J Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA HGDHCNMN_00941 497321.C664_11157 1.1e-140 506.5 Rhodocyclales ycfD GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016491,GO:0016705,GO:0016706,GO:0018193,GO:0018195,GO:0019538,GO:0030961,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0046914,GO:0051213,GO:0055114,GO:0071704,GO:1901564 1.14.11.47 ko:K18850 ko00000,ko01000,ko03009 Bacteria 1MW30@1224,2KYI5@206389,2VH3D@28216,COG2850@1,COG2850@2 NA|NA|NA S A domain family that is part of the cupin metalloenzyme superfamily. HGDHCNMN_00942 748247.AZKH_3519 4.6e-139 501.1 Rhodocyclales bamC GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045229,GO:0061024,GO:0071709,GO:0071840,GO:0071944,GO:0098552,GO:0098796,GO:1990063 ko:K07287 ko00000,ko02000 1.B.33.1 Bacteria 1N670@1224,2KUM7@206389,2VHS5@28216,COG3317@1,COG3317@2 NA|NA|NA M (Lipo)protein HGDHCNMN_00943 748247.AZKH_3520 6.5e-130 470.3 Rhodocyclales dapA GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008840,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0019877,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_2492,iYL1228.KPN_02812 Bacteria 1MUCM@1224,2KUG2@206389,2VIQ4@28216,COG0329@1,COG0329@2 NA|NA|NA E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) HGDHCNMN_00944 748247.AZKH_3521 5.8e-145 520.4 Rhodocyclales hdaH Bacteria 1MU7P@1224,2KVWI@206389,2VIK8@28216,COG0123@1,COG0123@2 NA|NA|NA BQ COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein HGDHCNMN_00945 85643.Tmz1t_3009 5.4e-111 407.5 Rhodocyclales moxR ko:K03924 ko00000,ko01000 Bacteria 1MUFN@1224,2KVFI@206389,2VKJJ@28216,COG0714@1,COG0714@2 NA|NA|NA S ATPase family associated with various cellular activities (AAA) HGDHCNMN_00946 62928.azo1093 2.6e-79 302.4 Rhodocyclales Bacteria 1R3QD@1224,2KW8Q@206389,2VN9P@28216,COG1721@1,COG1721@2 NA|NA|NA S conserved protein (some members contain a von Willebrand factor type A (vWA) domain) HGDHCNMN_00947 1123367.C666_15130 2e-179 636.0 Rhodocyclales tgpA 2.3.2.13 ko:K22452 ko00000,ko01000 Bacteria 1MWCE@1224,2KV42@206389,2VHZP@28216,COG1305@1,COG1305@2 NA|NA|NA E Domain of unknown function (DUF3488) HGDHCNMN_00948 62928.azo1091 6.8e-102 377.5 Rhodocyclales mltB ko:K08305 ko00000,ko01000,ko01011 GH103 Bacteria 1MUZ3@1224,2KVBT@206389,2VJGZ@28216,COG2951@1,COG2951@2 NA|NA|NA M lytic murein transglycosylase HGDHCNMN_00949 522306.CAP2UW1_4244 1.7e-41 175.3 unclassified Betaproteobacteria 1.20.4.1 ko:K00537 ko00000,ko01000 Bacteria 1KR3H@119066,1MZ4Z@1224,2VWVP@28216,COG1393@1,COG1393@2 NA|NA|NA C ArsC family HGDHCNMN_00950 62928.azo1090 4.5e-129 467.6 Rhodocyclales rpoS GO:0000988,GO:0000990,GO:0001000,GO:0001121,GO:0001123,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 ko:K03087 ko02026,ko05111,map02026,map05111 ko00000,ko00001,ko03021 Bacteria 1MUDI@1224,2KUKV@206389,2VIUT@28216,COG0568@1,COG0568@2 NA|NA|NA K RNA polymerase sigma HGDHCNMN_00951 522306.CAP2UW1_1365 5.7e-82 311.2 unclassified Betaproteobacteria nlpD GO:0000920,GO:0001896,GO:0005575,GO:0005623,GO:0008150,GO:0008219,GO:0009279,GO:0009987,GO:0012501,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0043085,GO:0044093,GO:0044462,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071944 ko:K05802,ko:K06194,ko:K12943 ko00000,ko02000 1.A.23.1.1,1.A.34.1.2 Bacteria 1KQ2E@119066,1RD24@1224,2VINR@28216,COG1388@1,COG1388@2,COG4942@1,COG4942@2 NA|NA|NA D Lysin motif HGDHCNMN_00952 748247.AZKH_3528 8.7e-79 300.1 Rhodocyclales pcm GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0030091,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 ko:K00573 ko00000,ko01000 Bacteria 1MXQC@1224,2KV8C@206389,2VQ3B@28216,COG2518@1,COG2518@2 NA|NA|NA J Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins HGDHCNMN_00953 748247.AZKH_3529 2.6e-111 408.3 Rhodocyclales surE GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 iSFxv_1172.SFxv_3035 Bacteria 1MVHE@1224,2KU8F@206389,2VIND@28216,COG0496@1,COG0496@2 NA|NA|NA S Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates HGDHCNMN_00955 1123367.C666_00150 1.1e-26 125.6 Rhodocyclales GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016999,GO:0017000,GO:0017144,GO:0044237,GO:0044249 ko:K21781 ko00333,map00333 M00837,M00838 R06746 RC00039,RC01438 ko00000,ko00001,ko00002 Bacteria 1N83X@1224,2KXFZ@206389,2VW0V@28216,COG0236@1,COG0236@2 NA|NA|NA IQ Phosphopantetheine attachment site HGDHCNMN_00956 748247.AZKH_0839 0.0 1144.4 Rhodocyclales nasA 1.6.99.3,1.7.7.2 ko:K00367,ko:K00372,ko:K03885 ko00190,ko00910,ko01120,map00190,map00910,map01120 M00531 R00791,R00798,R01106 RC02812 ko00000,ko00001,ko00002,ko01000 Bacteria 1NS3T@1224,2KUQZ@206389,2VIB1@28216,COG0243@1,COG0243@2,COG1251@1,COG1251@2 NA|NA|NA C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family HGDHCNMN_00957 1348657.M622_05680 0.0 2056.6 Rhodocyclales Bacteria 1MUIQ@1224,2KVCP@206389,2VKH5@28216,COG1075@1,COG1075@2,COG4995@1,COG4995@2 NA|NA|NA S CHAT domain HGDHCNMN_00958 497321.C664_19366 1.2e-98 366.3 Rhodocyclales atmc2 Bacteria 1RC3Z@1224,2KXTP@206389,2VQVC@28216,COG4249@1,COG4249@2 NA|NA|NA S Caspase domain HGDHCNMN_00959 748247.AZKH_3933 1.1e-117 429.9 Rhodocyclales ybiB GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 2.4.2.18 ko:K00766 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R01073 RC00440 ko00000,ko00001,ko00002,ko01000 Bacteria 1QJ8Q@1224,2KVGU@206389,2VH2D@28216,COG0547@1,COG0547@2 NA|NA|NA E glycosyl transferase family HGDHCNMN_00961 1123487.KB892846_gene590 3.4e-32 144.8 Rhodocyclales glxR 1.1.1.60 ko:K00042 ko00630,ko01100,map00630,map01100 R01745,R01747 RC00099 ko00000,ko00001,ko01000 Bacteria 1MUGU@1224,2KUVA@206389,2VIVI@28216,COG2084@1,COG2084@2 NA|NA|NA I 2-hydroxy-3-oxopropionate reductase HGDHCNMN_00962 1120999.JONM01000027_gene480 9.6e-47 194.9 Neisseriales ko:K20276 ko02024,map02024 ko00000,ko00001 Bacteria 1MU7T@1224,2KR3Z@206351,2VKA9@28216,COG2304@1,COG2304@2,COG2931@1,COG2931@2,COG4932@1,COG4932@2 NA|NA|NA Q TIGRFAM outer membrane adhesin like proteiin HGDHCNMN_00963 358220.C380_01325 3.6e-50 204.9 Comamonadaceae ko:K07684 ko02020,map02020 M00471 ko00000,ko00001,ko00002,ko02022 Bacteria 1N8MU@1224,2VUXK@28216,4AIZ0@80864,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon HGDHCNMN_00964 358220.C380_01320 1.1e-166 593.2 Comamonadaceae lapC ko:K02022,ko:K12542 M00330 ko00000,ko00002,ko02000,ko02044 3.A.1.109.4,8.A.1 Bacteria 1MUI8@1224,2VIAA@28216,4AD4H@80864,COG0845@1,COG0845@2 NA|NA|NA M TIGRFAM type I secretion membrane fusion protein, HlyD family HGDHCNMN_00965 358220.C380_01315 6.8e-285 986.5 Comamonadaceae lapB ko:K12541 ko02010,map02010 M00330 ko00000,ko00001,ko00002,ko02000,ko02044 3.A.1.109.3,3.A.1.109.4 Bacteria 1R2T0@1224,2VP2B@28216,4ABCX@80864,COG2274@1,COG2274@2 NA|NA|NA V TIGRFAM type I secretion system ATPase HGDHCNMN_00966 864051.BurJ1DRAFT_4398 8.2e-19 99.8 unclassified Burkholderiales Bacteria 1KMGN@119065,1N79W@1224,2E4XG@1,2VWJP@28216,32ZRD@2 NA|NA|NA S tryptophan synthase subunit beta HGDHCNMN_00967 62928.azo1202 2.9e-144 518.1 Rhodocyclales ispH GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0042380,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046490,GO:0048037,GO:0051536,GO:0051538,GO:0051540,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.4,2.7.4.25 ko:K00945,ko:K02945,ko:K03527 ko00240,ko00900,ko01100,ko01110,ko01130,ko03010,map00240,map00900,map01100,map01110,map01130,map03010 M00052,M00096,M00178 R00158,R00512,R01665,R05884,R08210 RC00002,RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03011 iECIAI1_1343.ECIAI1_0030,iECW_1372.ECW_m0028,iEKO11_1354.EKO11_3884,iEcHS_1320.EcHS_A0031,iEcolC_1368.EcolC_3626,iIT341.HP0400,iLJ478.TM1444,iPC815.YPO0477,iSFV_1184.SFV_0023,iSF_1195.SF0026,iSFxv_1172.SFxv_0027,iS_1188.S0028,iWFL_1372.ECW_m0028,iYL1228.KPN_00024 Bacteria 1MU7G@1224,2KU8H@206389,2VHM8@28216,COG0761@1,COG0761@2 NA|NA|NA IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis HGDHCNMN_00968 76114.ebB150 1.5e-47 195.7 Rhodocyclales fkpB GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0061077,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 ko:K03774,ko:K03775 ko00000,ko01000,ko03110 Bacteria 1RHD1@1224,2KX0N@206389,2VRJ4@28216,COG1047@1,COG1047@2 NA|NA|NA O Peptidyl-prolyl cis-trans HGDHCNMN_00969 76114.ebA4447 2.9e-55 221.5 Rhodocyclales lspA 3.4.23.36 ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 Bacteria 1RGV9@1224,2KWMG@206389,2VSEP@28216,COG0597@1,COG0597@2 NA|NA|NA M This protein specifically catalyzes the removal of signal peptides from prolipoproteins HGDHCNMN_00970 62928.azo1205 1.1e-167 596.3 Rhodocyclales ileS GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iG2583_1286.G2583_0027,iPC815.YPO0475 Bacteria 1MVBQ@1224,2KV9I@206389,2VIEJ@28216,COG0060@1,COG0060@2 NA|NA|NA J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) HGDHCNMN_00971 857087.Metme_2665 2.2e-23 116.3 Methylococcales Bacteria 1PS00@1224,1TKCS@1236,1XGS9@135618,COG0457@1,COG0457@2 NA|NA|NA S Protein of unknown function (DUF2971) HGDHCNMN_00973 748247.AZKH_0876 9.5e-182 643.3 Rhodocyclales 2.7.13.3 ko:K07645,ko:K07649 ko02020,ko02024,map02020,map02024 M00453,M00457 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1QTSA@1224,2KZNS@206389,2WGPM@28216,COG5002@1,COG5002@2 NA|NA|NA T Two-component sensor kinase N-terminal HGDHCNMN_00974 497321.C664_14544 1.8e-100 372.1 Rhodocyclales Bacteria 1MY5Y@1224,2KUBI@206389,2VI0W@28216,COG0745@1,COG0745@2 NA|NA|NA K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain HGDHCNMN_00975 497321.C664_14549 4.1e-279 966.8 Rhodocyclales groL GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0008144,GO:0008150,GO:0009266,GO:0009314,GO:0009405,GO:0009408,GO:0009628,GO:0009966,GO:0009967,GO:0009986,GO:0009987,GO:0010646,GO:0010647,GO:0016032,GO:0016462,GO:0016465,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018995,GO:0019058,GO:0019068,GO:0020003,GO:0022610,GO:0023051,GO:0023056,GO:0030430,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033643,GO:0033644,GO:0033646,GO:0033647,GO:0033648,GO:0033655,GO:0035639,GO:0035821,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0043900,GO:0043903,GO:0044174,GO:0044175,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044218,GO:0044279,GO:0044403,GO:0044406,GO:0044419,GO:0044421,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044650,GO:0044764,GO:0046812,GO:0046872,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0051817,GO:0052047,GO:0052212,GO:0061077,GO:0065007,GO:0065010,GO:0097159,GO:0097367,GO:0101031,GO:1901222,GO:1901224,GO:1901265,GO:1901363,GO:1902531,GO:1902533,GO:1990220,GO:2000535 ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Bacteria 1MURR@1224,2KUH8@206389,2VIW1@28216,COG0459@1,COG0459@2 NA|NA|NA O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions HGDHCNMN_00976 305700.B447_17089 3.9e-39 167.2 Rhodocyclales groS GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 ko:K04078 ko00000,ko03029,ko03110 Bacteria 1MZ2X@1224,2KWRA@206389,2VSKJ@28216,COG0234@1,COG0234@2 NA|NA|NA O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter HGDHCNMN_00977 62928.azo2396 2.4e-279 968.0 Rhodocyclales Bacteria 1QVCH@1224,2KVN0@206389,2WGQ6@28216,COG4772@1,COG4772@2 NA|NA|NA P TonB dependent receptor HGDHCNMN_00978 883126.HMPREF9710_01010 4.4e-31 140.6 Betaproteobacteria Bacteria 1N8AH@1224,2W4M8@28216,COG4744@1,COG4744@2 NA|NA|NA S Uncharacterized conserved protein (DUF2149) HGDHCNMN_00979 883126.HMPREF9710_01009 1.1e-53 216.1 Betaproteobacteria Bacteria 1RJQC@1224,2VT8B@28216,COG0811@1,COG0811@2 NA|NA|NA U Biopolymer transport HGDHCNMN_00980 883126.HMPREF9710_01008 0.0 1837.4 Oxalobacteraceae cobN 6.6.1.2 ko:K02230 ko00860,ko01100,map00860,map01100 R05227 RC02000 ko00000,ko00001,ko01000 Bacteria 1MU5W@1224,2VI5I@28216,4762U@75682,COG1429@1,COG1429@2 NA|NA|NA H cobalamin biosynthesis protein HGDHCNMN_00982 748247.AZKH_4345 1.2e-290 1005.4 Rhodocyclales glpCD 1.1.2.4,1.12.98.1 ko:K00102,ko:K00441 ko00620,ko00680,ko01100,ko01120,map00620,map00680,map01100,map01120 R00197,R03025 RC00044,RC02628 ko00000,ko00001,ko01000 Bacteria 1MU43@1224,2KUWB@206389,2VHYU@28216,COG0247@1,COG0247@2,COG0277@1,COG0277@2,COG1145@1,COG1145@2 NA|NA|NA C FAD linked oxidase HGDHCNMN_00983 7159.AAEL015589-PA 2.6e-208 731.1 Arthropoda Arthropoda 38H6J@33154,3BC6X@33208,3CVK7@33213,41VCW@6656,COG1960@1,KOG0139@2759 NA|NA|NA E flavin adenine dinucleotide binding. It is involved in the biological process described with oxidation-reduction process HGDHCNMN_00984 748247.AZKH_0512 5.5e-172 610.5 Rhodocyclales atoB 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MU5G@1224,2KV1Y@206389,2VH4C@28216,COG0183@1,COG0183@2 NA|NA|NA I Belongs to the thiolase family HGDHCNMN_00985 522306.CAP2UW1_1196 2.9e-192 679.1 Betaproteobacteria 2.1.1.72 ko:K00571,ko:K07448 ko00000,ko01000,ko02048 Bacteria 1MWRF@1224,2VVW1@28216,COG0457@1,COG0457@2,COG1715@1,COG1715@2 NA|NA|NA T Tetratricopeptide repeat HGDHCNMN_00986 395961.Cyan7425_4154 4.7e-61 242.3 Cyanothece Bacteria 1GJV9@1117,3KJWA@43988,COG4278@1,COG4278@2 NA|NA|NA S membrane protein (DUF2207) HGDHCNMN_00987 85643.Tmz1t_2489 3.3e-55 221.1 Rhodocyclales ysmA 3.1.2.23 ko:K01075,ko:K07107 ko00130,ko00362,ko01100,ko01110,ko01120,map00130,map00362,map01100,map01110,map01120 R01301 RC00004,RC00174 ko00000,ko00001,ko01000 Bacteria 1RG6B@1224,2KYQY@206389,2VTAU@28216,COG0824@1,COG0824@2 NA|NA|NA S Thioesterase-like superfamily HGDHCNMN_00988 522306.CAP2UW1_1893 3.3e-139 501.5 unclassified Betaproteobacteria 2.8.3.1 ko:K01026 ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120 R00928,R01449,R05508 RC00012,RC00014,RC00137 ko00000,ko00001,ko01000 Bacteria 1KR3Z@119066,1MUJW@1224,2VH8B@28216,COG4670@1,COG4670@2 NA|NA|NA I Malonate decarboxylase, alpha subunit, transporter HGDHCNMN_00989 640081.Dsui_3083 5e-62 244.2 Rhodocyclales livK ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MWR8@1224,2KVK6@206389,2VHH6@28216,COG0683@1,COG0683@2 NA|NA|NA E amino acid HGDHCNMN_00990 62928.azo1060 1.8e-214 751.9 Rhodocyclales cysS GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 6.1.1.16,6.3.1.13 ko:K01883,ko:K15526 ko00970,map00970 M00359,M00360 R03650 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iECUMN_1333.ECUMN_0566,iJN746.PP_2905 Bacteria 1MV8H@1224,2KUCB@206389,2VHN4@28216,COG0215@1,COG0215@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family HGDHCNMN_00991 1000565.METUNv1_00353 4.3e-86 325.1 Rhodocyclales Bacteria 1Q84V@1224,2KUGG@206389,2VJAQ@28216,COG0457@1,COG0457@2 NA|NA|NA S Domain of unknown function (DUF4440) HGDHCNMN_00992 640081.Dsui_3086 6.5e-152 543.9 Rhodocyclales pgp2 Bacteria 1N2B6@1224,2KVPI@206389,2VJXB@28216,COG3034@1,COG3034@2 NA|NA|NA S L,D-transpeptidase catalytic domain HGDHCNMN_00993 522306.CAP2UW1_3280 5.4e-170 605.1 Betaproteobacteria Bacteria 1MXMD@1224,2VIMP@28216,COG0457@1,COG0457@2 NA|NA|NA O COG0457 FOG TPR repeat HGDHCNMN_00994 62928.azo3191 4.1e-208 730.7 Rhodocyclales atoC ko:K02481 ko00000,ko02022 Bacteria 1MU0N@1224,2KUUN@206389,2VHSB@28216,COG2204@1,COG2204@2 NA|NA|NA T COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains HGDHCNMN_00995 76114.ebA38 4.7e-195 688.0 Rhodocyclales prsK Bacteria 1MU55@1224,2KV0R@206389,2VIZD@28216,COG4191@1,COG4191@2 NA|NA|NA T Histidine kinase HGDHCNMN_00996 62928.azo3193 1.3e-172 612.8 Rhodocyclales tuaA Bacteria 1MV6W@1224,2KVUX@206389,2VIY4@28216,COG2148@1,COG2148@2 NA|NA|NA M COG2148 Sugar transferases involved in lipopolysaccharide synthesis HGDHCNMN_00997 62928.azo2272 2.3e-252 878.2 Rhodocyclales kup ko:K03549 ko00000,ko02000 2.A.72 Bacteria 1MUVH@1224,2KUQJ@206389,2VH9I@28216,COG3158@1,COG3158@2 NA|NA|NA P Transport of potassium into the cell HGDHCNMN_00998 1121035.AUCH01000005_gene23 3.1e-281 974.9 Rhodocyclales Bacteria 1MU2C@1224,2KVVB@206389,2VH3V@28216,COG5001@1,COG5001@2 NA|NA|NA T signal transduction protein containing a membrane domain an EAL and a GGDEF domain HGDHCNMN_00999 522306.CAP2UW1_3951 4.7e-44 183.7 Betaproteobacteria GO:0002790,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0030255,GO:0032940,GO:0032991,GO:0033036,GO:0042886,GO:0043684,GO:0044097,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0097159,GO:1901363 ko:K19092 ko00000,ko02048 Bacteria 1REHT@1224,2VRUJ@28216,COG3668@1,COG3668@2 NA|NA|NA S Plasmid stabilization system HGDHCNMN_01000 1218074.BAXZ01000020_gene3915 1.7e-36 158.3 Burkholderiaceae Bacteria 1KAPI@119060,1N8QY@1224,2VUAT@28216,COG2161@1,COG2161@2 NA|NA|NA D Antitoxin component of a toxin-antitoxin (TA) module HGDHCNMN_01001 159087.Daro_1445 4.1e-122 444.5 Rhodocyclales MA20_23080 Bacteria 1MVNV@1224,2KVF5@206389,2VH9E@28216,COG2197@1,COG2197@2,COG2199@1,COG3706@2 NA|NA|NA K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain HGDHCNMN_01002 1265502.KB905932_gene1808 0.0 1487.2 Comamonadaceae MA20_23075 Bacteria 1NRP8@1224,2VJVN@28216,4ACV5@80864,COG0642@1,COG0784@1,COG0784@2,COG1457@1,COG1457@2,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_01003 1123487.KB892846_gene585 8.8e-166 590.1 Rhodocyclales pilR ko:K02667 ko02020,map02020 M00501 ko00000,ko00001,ko00002,ko02022,ko02035 Bacteria 1MU0N@1224,2KUM4@206389,2VHSB@28216,COG2204@1,COG2204@2 NA|NA|NA T COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains HGDHCNMN_01004 76114.ebA3892 9.9e-145 520.4 Rhodocyclales pilS 2.7.13.3 ko:K02668 ko02020,map02020 M00501 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 Bacteria 1QU7R@1224,2KUXS@206389,2VICU@28216,COG4191@1,COG4191@2 NA|NA|NA T signal transduction histidine kinase HGDHCNMN_01005 62928.azo3358 4.3e-13 80.5 Rhodocyclales ko:K06950 ko00000 Bacteria 1NGIK@1224,2EHK0@1,2KXIN@206389,2VXN8@28216,33BBV@2 NA|NA|NA HGDHCNMN_01006 748247.AZKH_3928 4.1e-118 431.0 Rhodocyclales ybdL GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.6.1.17,2.6.1.88 ko:K14267,ko:K14287 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R04475,R08618 RC00006,RC00025 ko00000,ko00001,ko00002,ko01000,ko01007 iNJ661.Rv0858c Bacteria 1MW0Z@1224,2KU6C@206389,2VJD8@28216,COG0436@1,COG0436@2 NA|NA|NA E COG0436 Aspartate tyrosine aromatic aminotransferase HGDHCNMN_01007 62928.azo0382 2e-54 219.2 Rhodocyclales dsbA ko:K03673 ko01503,map01503 M00728 ko00000,ko00001,ko00002,ko03110 Bacteria 1RGWH@1224,2KWSF@206389,2VSFV@28216,COG1651@1,COG1651@2 NA|NA|NA O Thiol disulfide interchange protein HGDHCNMN_01008 62928.azo0383 1.2e-98 366.3 Rhodocyclales Bacteria 1QTVZ@1224,2KZNP@206389,2WGPF@28216,COG4221@1,COG4221@2 NA|NA|NA S KR domain HGDHCNMN_01009 1123261.AXDW01000007_gene2153 8.5e-135 486.9 Xanthomonadales ald 1.4.1.1 ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 R00396 RC00008 ko00000,ko00001,ko01000 Bacteria 1QTX1@1224,1T1JB@1236,1X4JK@135614,COG0686@1,COG0686@2 NA|NA|NA E alanine dehydrogenase HGDHCNMN_01010 1123367.C666_09310 1.1e-97 363.2 Rhodocyclales ko:K02016 ko02010,map02010 M00240 ko00000,ko00001,ko00002,ko02000 3.A.1.14 Bacteria 1QVI8@1224,2KURN@206389,2WGSH@28216,COG4558@1,COG4558@2 NA|NA|NA P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component HGDHCNMN_01011 1286093.C266_16380 2.6e-88 332.0 Burkholderiaceae mscS ko:K03442 ko00000,ko02000 1.A.23.2 Bacteria 1JZW2@119060,1N596@1224,2VIWA@28216,COG0668@1,COG0668@2 NA|NA|NA M mechanosensitive ion channel HGDHCNMN_01012 85643.Tmz1t_0727 8.4e-28 130.2 Rhodocyclales Bacteria 1NASM@1224,2KX9H@206389,2VVUB@28216,COG1569@1,COG1569@2 NA|NA|NA S nucleic acid-binding protein, contains PIN domain HGDHCNMN_01013 305700.B447_10857 8.3e-305 1052.4 Rhodocyclales phbC ko:K03821 ko00650,map00650 R04254 RC00004 ko00000,ko00001,ko01000 Bacteria 1MU68@1224,2KV59@206389,2VH50@28216,COG3243@1,COG3243@2 NA|NA|NA I poly(R)-hydroxyalkanoic acid synthase HGDHCNMN_01014 748247.AZKH_0508 3.8e-129 468.0 Rhodocyclales yqjP Bacteria 1MUXF@1224,2KV95@206389,2VKJX@28216,COG0491@1,COG0491@2 NA|NA|NA S COG0491 Zn-dependent hydrolases, including glyoxylases HGDHCNMN_01015 1348657.M622_00505 2.1e-41 175.3 Rhodocyclales cueR Bacteria 1RITY@1224,2KWYU@206389,2VSPA@28216,COG0789@1,COG0789@2 NA|NA|NA K transcriptional HGDHCNMN_01016 748247.AZKH_0510 6.7e-65 253.4 Rhodocyclales Bacteria 1RGVD@1224,2KYNZ@206389,2VRED@28216,COG2050@1,COG2050@2 NA|NA|NA Q Thioesterase superfamily HGDHCNMN_01017 748247.AZKH_0511 3.5e-184 651.0 Rhodocyclales can GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914 4.2.1.1 ko:K01673 ko00910,map00910 R00132,R10092 RC02807 ko00000,ko00001,ko01000 iNJ661.Rv3273,iSBO_1134.SBO_0115,iSbBS512_1146.SbBS512_E0119 Bacteria 1NGFN@1224,2KUSB@206389,2VIBS@28216,COG0288@1,COG0288@2,COG0454@1,COG0456@2 NA|NA|NA P Reversible hydration of carbon dioxide HGDHCNMN_01018 522306.CAP2UW1_4331 1.8e-48 198.7 Betaproteobacteria Bacteria 1RGVP@1224,2VVH4@28216,COG2050@1,COG2050@2 NA|NA|NA Q Thioesterase superfamily HGDHCNMN_01019 1454004.AW11_03897 2.8e-63 248.4 unclassified Betaproteobacteria nahD Bacteria 1KQTA@119066,1RDNQ@1224,2VQJ1@28216,COG3917@1,COG3917@2 NA|NA|NA Q DSBA-like thioredoxin domain HGDHCNMN_01020 522306.CAP2UW1_4329 3.2e-56 224.9 unclassified Betaproteobacteria nahD Bacteria 1KQTA@119066,1RDNQ@1224,2VQJ1@28216,COG3917@1,COG3917@2 NA|NA|NA Q DSBA-like thioredoxin domain HGDHCNMN_01021 640081.Dsui_0979 4.1e-72 277.7 Rhodocyclales yvdD_1 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 Bacteria 1RD59@1224,2KWBF@206389,2VRA6@28216,COG1611@1,COG1611@2 NA|NA|NA S Possible lysine decarboxylase HGDHCNMN_01022 397945.Aave_2195 2.3e-193 681.4 Comamonadaceae adhC 1.1.1.1,1.1.1.284 ko:K00121 ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204 R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273 ko00000,ko00001,ko01000 Bacteria 1MUK4@1224,2VIJB@28216,4AAD5@80864,COG1062@1,COG1062@2 NA|NA|NA C Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily HGDHCNMN_01023 1057002.KB905370_gene3571 5.6e-123 447.2 Rhizobiaceae fghA 3.1.2.12 ko:K01070,ko:K09795 ko00680,ko01120,ko01200,map00680,map01120,map01200 R00527 RC00167,RC00320 ko00000,ko00001,ko01000 CE1 Bacteria 1MUID@1224,2TQSM@28211,4BJ7C@82115,COG0627@1,COG0627@2 NA|NA|NA S Serine hydrolase involved in the detoxification of formaldehyde HGDHCNMN_01024 1449351.RISW2_10775 1.1e-33 149.4 Roseivivax GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009987,GO:0015979,GO:0016020,GO:0044237,GO:0044464,GO:0071944 ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 Bacteria 1MZGS@1224,2UCUT@28211,4KMQE@93682,COG3474@1,COG3474@2 NA|NA|NA C Cytochrome c HGDHCNMN_01026 1157708.KB907456_gene2246 5.7e-71 273.5 Comamonadaceae adhC 1.1.1.1,1.1.1.284 ko:K00121 ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204 R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273 ko00000,ko00001,ko01000 Bacteria 1MUK4@1224,2VIJB@28216,4AAD5@80864,COG1062@1,COG1062@2 NA|NA|NA C Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily HGDHCNMN_01027 395019.Bmul_0694 4e-113 414.5 Burkholderiaceae fghA 3.1.2.12 ko:K01070,ko:K09795 ko00680,ko01120,ko01200,map00680,map01120,map01200 R00527 RC00167,RC00320 ko00000,ko00001,ko01000 CE1 Bacteria 1K0PQ@119060,1MUID@1224,2VJB2@28216,COG0627@1,COG0627@2 NA|NA|NA S Serine hydrolase involved in the detoxification of formaldehyde HGDHCNMN_01028 1123367.C666_09190 1.3e-77 296.2 Rhodocyclales Bacteria 1R52Z@1224,28JRZ@1,2KYT9@206389,2VRVF@28216,2Z9HI@2 NA|NA|NA S Domain of unknown function (DUF4126) HGDHCNMN_01029 85643.Tmz1t_0753 9.7e-129 466.5 Rhodocyclales yngG GO:0003674,GO:0003824,GO:0004419,GO:0005488,GO:0016829,GO:0016830,GO:0016833,GO:0043167,GO:0043169,GO:0046872 4.1.3.4 ko:K01640 ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146 M00036,M00088 R01360,R08090 RC00502,RC00503,RC01118,RC01946 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUMX@1224,2KUNG@206389,2VIUW@28216,COG0119@1,COG0119@2 NA|NA|NA E HMGL-like HGDHCNMN_01030 1097668.BYI23_A000740 7.3e-09 65.9 Burkholderiaceae Bacteria 1K2TC@119060,1NDST@1224,2VY7N@28216,COG2030@1,COG2030@2 NA|NA|NA I PFAM MaoC domain protein dehydratase HGDHCNMN_01032 748247.AZKH_0518 1.6e-115 422.5 Rhodocyclales Bacteria 1NCIF@1224,2KV3A@206389,2VJVR@28216,COG0491@1,COG0491@2 NA|NA|NA S COG0491 Zn-dependent hydrolases, including glyoxylases HGDHCNMN_01033 62928.azo0399 8.4e-119 433.3 Rhodocyclales rapZ GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 ko:K06958 ko00000,ko03019 Bacteria 1MVX6@1224,2KUWU@206389,2VIH5@28216,COG1660@1,COG1660@2 NA|NA|NA S Displays ATPase and GTPase activities HGDHCNMN_01034 1123367.C666_05075 3.7e-44 184.1 Rhodocyclales Bacteria 1N1PN@1224,2KWYI@206389,2VUW8@28216,COG5341@1,COG5341@2 NA|NA|NA S NusG domain II HGDHCNMN_01035 1348657.M622_00395 1.9e-71 275.4 Rhodocyclales hepS 2.5.1.30 ko:K00805 ko00900,ko01110,map00900,map01110 R09247 RC00279 ko00000,ko00001,ko01000,ko01006 Bacteria 1RJIB@1224,2KWG1@206389,2VRM1@28216,COG4769@1,COG4769@2 NA|NA|NA S Heptaprenyl diphosphate synthase component I HGDHCNMN_01036 1000565.METUNv1_02777 1.3e-39 169.5 Rhodocyclales ypeP 3.1.26.4 ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1RJZT@1224,2KXBT@206389,2VSDS@28216,COG0328@1,COG0328@2 NA|NA|NA L Reverse transcriptase-like HGDHCNMN_01037 864051.BurJ1DRAFT_1443 9.5e-51 208.4 Proteobacteria Bacteria 1ND43@1224,COG3629@1,COG3629@2 NA|NA|NA T intracellular signal transduction HGDHCNMN_01039 748247.AZKH_1688 1.4e-100 372.9 Betaproteobacteria dyp ko:K07223 ko00000 Bacteria 1MWDD@1224,2VKMS@28216,COG2837@1,COG2837@2 NA|NA|NA C Dyp-type peroxidase family HGDHCNMN_01040 748247.AZKH_4542 3.8e-89 334.3 Rhodocyclales metW 2.3.1.31 ko:K00641 ko00270,ko01100,ko01130,map00270,map01100,map01130 R01776 RC00004,RC00041 ko00000,ko00001,ko01000 Bacteria 1MVSY@1224,2KV25@206389,2VMPA@28216,COG0500@1,COG2226@2 NA|NA|NA Q Methionine biosynthesis protein MetW HGDHCNMN_01041 62928.azo3971 3.5e-184 651.0 Rhodocyclales metX GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 ko:K00641 ko00270,ko01100,ko01130,map00270,map01100,map01130 R01776 RC00004,RC00041 ko00000,ko00001,ko01000 Bacteria 1MVJV@1224,2KVER@206389,2VHU9@28216,COG2021@1,COG2021@2 NA|NA|NA E Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine HGDHCNMN_01042 85643.Tmz1t_0467 3.2e-226 791.2 Rhodocyclales ptsI 2.7.1.202,2.7.3.9 ko:K02768,ko:K08483,ko:K11183 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 M00273 R03232 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.2.1,8.A.7 Bacteria 1MUT8@1224,2KUBD@206389,2VH9N@28216,COG1080@1,COG1080@2 NA|NA|NA G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) HGDHCNMN_01043 1123367.C666_13375 3.8e-33 147.1 Rhodocyclales ptsH GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 ko:K02784,ko:K08485,ko:K11189 ko02060,map02060 ko00000,ko00001,ko02000 4.A.2.1,8.A.8.1.1 Bacteria 1N6RM@1224,2KWVF@206389,2VU8W@28216,COG1925@1,COG1925@2 NA|NA|NA G Phosphotransferase System HGDHCNMN_01044 1348657.M622_01545 1.1e-47 196.1 Rhodocyclales manX 2.7.1.191,2.7.1.194 ko:K02793,ko:K02794,ko:K02821 ko00051,ko00053,ko00520,ko01100,ko01120,ko02060,map00051,map00053,map00520,map01100,map01120,map02060 M00276,M00283,M00550 R02630,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1,4.A.7.1 Bacteria 1RHH7@1224,2KWTC@206389,2VT9I@28216,COG2893@1,COG2893@2 NA|NA|NA G Phosphotransferase system, mannose fructose-specific component IIA HGDHCNMN_01045 497321.C664_17747 4.9e-132 477.6 Rhodocyclales rnfF 2.7.1.180 ko:K03734 ko00000,ko01000 Bacteria 1MW6K@1224,2KU7G@206389,2VPGP@28216,COG1477@1,COG1477@2 NA|NA|NA H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein HGDHCNMN_01046 497321.C664_17752 4.1e-130 471.1 Rhodocyclales gshB GO:0000287,GO:0003674,GO:0003824,GO:0004363,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0042601,GO:0042763,GO:0043043,GO:0043167,GO:0043169,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.2,6.3.2.3 ko:K01919,ko:K01920,ko:K05844 ko00270,ko00480,ko01100,map00270,map00480,map01100 M00118 R00497,R00894,R10993,R10994 RC00064,RC00090,RC00096,RC00141 ko00000,ko00001,ko00002,ko01000,ko03009 iECED1_1282.ECED1_3410,iECP_1309.ECP_2941 Bacteria 1MVUA@1224,2KUJJ@206389,2VIZ3@28216,COG0189@1,COG0189@2 NA|NA|NA H Belongs to the prokaryotic GSH synthase family HGDHCNMN_01047 76114.ebA2547 7.4e-207 726.5 Rhodocyclales secD GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 6.3.2.2 ko:K01919,ko:K03072,ko:K12257 ko00270,ko00480,ko01100,ko02024,ko03060,ko03070,map00270,map00480,map01100,map02024,map03060,map03070 M00118,M00335 R00894,R10993 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 Bacteria 1MVFS@1224,2KUNH@206389,2VHD9@28216,COG0342@1,COG0342@2 NA|NA|NA U glutamate--cysteine ligase HGDHCNMN_01048 748247.AZKH_4438 1.7e-163 582.4 Rhodocyclales 2.1.1.72 ko:K07317 ko00000,ko01000,ko02048 Bacteria 1QP3Z@1224,2KVWP@206389,2VI9V@28216,COG0827@1,COG0827@2 NA|NA|NA L Eco57I restriction-modification methylase HGDHCNMN_01049 517722.AEUE01000003_gene1284 2.4e-23 116.3 Sphingomonadales Bacteria 1RAB9@1224,2K0E2@204457,2U5QF@28211,COG5653@1,COG5653@2 NA|NA|NA M Acetyltransferase (GNAT) domain HGDHCNMN_01050 748247.AZKH_4451 2.7e-166 591.7 Rhodocyclales yggW GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 Bacteria 1MU76@1224,2KUR1@206389,2VHBB@28216,COG0635@1,COG0635@2 NA|NA|NA H Involved in the biosynthesis of porphyrin-containing compound HGDHCNMN_01051 85643.Tmz1t_4025 3.2e-72 278.1 Rhodocyclales rdgB GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036220,GO:0036222,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046983,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66,5.1.1.3 ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 R00260,R00426,R00720,R01855,R02100,R02720,R03531 RC00002,RC00302 ko00000,ko00001,ko01000,ko01011 iEC55989_1330.EC55989_3247,iECO111_1330.ECO111_3702,iECSE_1348.ECSE_3222,iECW_1372.ECW_m3212,iEKO11_1354.EKO11_0774,iEcE24377_1341.EcE24377A_3298,iWFL_1372.ECW_m3212 Bacteria 1MUK5@1224,2KVRN@206389,2VQ1Z@28216,COG0127@1,COG0127@2 NA|NA|NA F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions HGDHCNMN_01052 748247.AZKH_4449 6.3e-102 377.1 Rhodocyclales rph GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56,3.6.1.66 ko:K00989,ko:K02428 ko00230,map00230 R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000,ko03016 Bacteria 1MVFZ@1224,2KUAD@206389,2VIGI@28216,COG0689@1,COG0689@2 NA|NA|NA J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates HGDHCNMN_01053 62928.azo3962 1.3e-112 412.9 Rhodocyclales pphA 3.1.3.16 ko:K01090,ko:K20074 ko00000,ko01000,ko01009 Bacteria 1MVE7@1224,2KUHY@206389,2VIAV@28216,COG0631@1,COG0631@2 NA|NA|NA T COG0631 Serine threonine protein phosphatase HGDHCNMN_01054 1123487.KB892868_gene1245 4.5e-137 494.2 Rhodocyclales Bacteria 1PJRR@1224,2KUA5@206389,2VHMW@28216,COG0515@1,COG0515@2 NA|NA|NA KLT serine threonine protein kinase HGDHCNMN_01055 62928.azo3960 1.3e-111 409.5 Rhodocyclales yicC GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009022,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:0140101,GO:1901360,GO:1901361,GO:1901575 Bacteria 1MWRA@1224,2KUSK@206389,2VIFC@28216,COG1561@1,COG1561@2 NA|NA|NA S Stress-induced protein HGDHCNMN_01056 62928.azo3953 8.6e-89 333.2 Rhodocyclales gmk GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8,4.1.1.23 ko:K00942,ko:K01591 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00050,M00051 R00332,R00965,R02090 RC00002,RC00409 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_2813,iIT341.HP0321,iPC815.YPO0040,iSBO_1134.SBO_3729,iSFV_1184.SFV_3881,iSFxv_1172.SFxv_4016,iUTI89_1310.UTI89_C4193 Bacteria 1MW92@1224,2KVFX@206389,2VPCK@28216,COG0194@1,COG0194@2 NA|NA|NA F Essential for recycling GMP and indirectly, cGMP HGDHCNMN_01057 62928.azo3952 1.7e-28 131.3 Rhodocyclales rpoZ GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1N6TX@1224,2KX71@206389,2VVUH@28216,COG1758@1,COG1758@2 NA|NA|NA K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits HGDHCNMN_01058 305700.B447_02071 8.7e-134 483.4 Rhodocyclales spoT GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5,3.1.7.2 ko:K00951,ko:K01139 ko00230,map00230 R00336,R00429 RC00002,RC00078 ko00000,ko00001,ko01000,ko03009 iECNA114_1301.ECNA114_3794,iECOK1_1307.ECOK1_4092,iECP_1309.ECP_3748,iECS88_1305.ECS88_4065,iECSF_1327.ECSF_3486,iLF82_1304.LF82_2165,iNRG857_1313.NRG857_18145,iUMN146_1321.UM146_18405,iUTI89_1310.UTI89_C4195,ic_1306.c4475 Bacteria 1MU44@1224,2KVJT@206389,2VIA1@28216,COG0317@1,COG0317@2 NA|NA|NA KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance HGDHCNMN_01060 76114.ebA4655 1.9e-131 475.7 Rhodocyclales Bacteria 1R4MG@1224,2KUUX@206389,2VISE@28216,COG2207@1,COG2207@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_01061 1123399.AQVE01000014_gene62 4.2e-78 298.1 Thiotrichales fdhD GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0043085,GO:0043546,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0050790,GO:0065007,GO:0065009,GO:0097159,GO:0097163,GO:0140104,GO:1901363 ko:K02379 ko00000 Bacteria 1NRU0@1224,1RNFH@1236,462B3@72273,COG1526@1,COG1526@2 NA|NA|NA C Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH HGDHCNMN_01062 1123399.AQVE01000014_gene61 0.0 1515.0 Thiotrichales fdsA 1.17.1.10,1.17.1.9 ko:K00123,ko:K05299 ko00630,ko00680,ko00720,ko01100,ko01120,ko01200,map00630,map00680,map00720,map01100,map01120,map01200 M00377 R00134,R00519 RC02796 ko00000,ko00001,ko00002,ko01000 Bacteria 1QTZB@1224,1T1JA@1236,461VS@72273,COG3383@1,COG3383@2 NA|NA|NA C TIGRFAM formate dehydrogenase, alpha subunit, archaeal-type HGDHCNMN_01063 497321.C664_17707 9.1e-220 769.6 Rhodocyclales fdsB 1.6.5.3 ko:K00124,ko:K00335 ko00190,ko00630,ko00680,ko01100,ko01120,ko01200,map00190,map00630,map00680,map01100,map01120,map01200 M00144 R00519,R11945 RC00061,RC02796 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1MV8F@1224,2KXTE@206389,2VIGR@28216,COG1894@1,COG1894@2 NA|NA|NA C NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HGDHCNMN_01064 748247.AZKH_p0277 7.1e-51 206.8 Rhodocyclales fdsG 1.6.5.3 ko:K00124,ko:K00127,ko:K00334,ko:K00335 ko00190,ko00630,ko00680,ko01100,ko01120,ko01200,map00190,map00630,map00680,map01100,map01120,map01200 M00144 R00519,R11945 RC00061,RC02796 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1RHBU@1224,2KYP1@206389,2VSVZ@28216,COG1905@1,COG1905@2 NA|NA|NA C Thioredoxin-like [2Fe-2S] ferredoxin HGDHCNMN_01066 748247.AZKH_0267 1.1e-241 842.8 Rhodocyclales recD GO:0000166,GO:0000724,GO:0000725,GO:0003674,GO:0003824,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008854,GO:0009338,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.1.11.5 ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MW43@1224,2KYGX@206389,2VGZ6@28216,COG0507@1,COG0507@2 NA|NA|NA L A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD HGDHCNMN_01067 768671.ThimaDRAFT_3533 0.0 1493.0 Chromatiales recB GO:0000166,GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008854,GO:0009314,GO:0009338,GO:0009628,GO:0009987,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017076,GO:0017111,GO:0030554,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044355,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0099046,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.1.11.5,3.6.4.12 ko:K03582,ko:K16898 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MUTF@1224,1RPC6@1236,1WWH2@135613,COG1074@1,COG1074@2 NA|NA|NA L A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA HGDHCNMN_01068 748247.AZKH_0265 0.0 1527.7 Rhodocyclales recC GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008854,GO:0009314,GO:0009338,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044355,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0099046,GO:0140097,GO:1901360,GO:1902494 3.1.11.5 ko:K03583 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MWTI@1224,2KYIT@206389,2VHW7@28216,COG1330@1,COG1330@2 NA|NA|NA L A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity HGDHCNMN_01069 63737.Npun_F6606 4.3e-57 229.2 Bacteria Bacteria COG4995@1,COG4995@2 NA|NA|NA S CHAT domain HGDHCNMN_01070 159087.Daro_2258 2.5e-105 389.0 Rhodocyclales 2.7.13.3 ko:K02484,ko:K07644,ko:K07649 ko02020,map02020 M00452,M00457,M00745 ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 Bacteria 1QTVA@1224,2KZWF@206389,2VJ51@28216,COG0642@1,COG0642@2 NA|NA|NA T Member of a two-component regulatory system HGDHCNMN_01071 375451.RD1_0132 4e-09 67.4 Roseobacter puhB Bacteria 1RHA4@1224,2P35K@2433,2UA6D@28211,COG3428@1,COG3428@2 NA|NA|NA S Bacterial PH domain HGDHCNMN_01073 62928.azo0681 3.4e-31 141.0 Rhodocyclales ko:K14393 ko00000,ko02000 2.A.21.7 Bacteria 1MZF3@1224,2KWXT@206389,2VU2F@28216,COG3162@1,COG3162@2 NA|NA|NA S Protein of unknown function, DUF485 HGDHCNMN_01074 748247.AZKH_4147 1.4e-112 412.5 Rhodocyclales Bacteria 1MXBB@1224,2KUVG@206389,2VICM@28216,COG1024@1,COG1024@2 NA|NA|NA I enoyl-CoA hydratase HGDHCNMN_01075 1124983.PFLCHA0_c37140 3.3e-80 307.4 Gammaproteobacteria yjjH ko:K01990,ko:K02052 ko02024,map02024 M00193,M00254 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.11 Bacteria 1N8PY@1224,1SZFU@1236,COG0457@1,COG0457@2,COG1409@1,COG1409@2,COG3842@1,COG3842@2 NA|NA|NA P Calcineurin-like phosphoesterase HGDHCNMN_01076 62928.azo2847 1.9e-49 202.6 Betaproteobacteria Bacteria 1P3AA@1224,2CDAU@1,2W4H9@28216,34AKY@2 NA|NA|NA HGDHCNMN_01077 1304883.KI912532_gene1009 2.5e-112 411.8 Rhodocyclales ko:K07090 ko00000 Bacteria 1R3V4@1224,2KUI2@206389,2VKXN@28216,COG0730@1,COG0730@2 NA|NA|NA S membrane transporter protein HGDHCNMN_01078 62928.azo0635 6.9e-65 253.4 Rhodocyclales Bacteria 1RHRU@1224,2KWHF@206389,2VRIB@28216,COG2947@1,COG2947@2 NA|NA|NA S EVE domain HGDHCNMN_01079 375286.mma_2431 3.6e-145 521.9 Betaproteobacteria mscM Bacteria 1N66N@1224,2WGKB@28216,COG0668@1,COG0668@2 NA|NA|NA M Mechanosensitive ion channel HGDHCNMN_01080 1121035.AUCH01000015_gene2581 3.7e-16 90.5 Rhodocyclales Bacteria 1NDKW@1224,2EA8Z@1,2KXKV@206389,2VVWJ@28216,334DE@2 NA|NA|NA HGDHCNMN_01081 1276756.AUEX01000001_gene890 1.3e-114 419.5 Comamonadaceae MA20_35690 Bacteria 1MXCD@1224,2VMQB@28216,4AAQF@80864,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family HGDHCNMN_01082 1123367.C666_03980 4.3e-71 274.2 Rhodocyclales ruvC GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MUJI@1224,2KW42@206389,2VQ3U@28216,COG0817@1,COG0817@2 NA|NA|NA L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group HGDHCNMN_01083 1304883.KI912532_gene295 3e-119 436.8 Betaproteobacteria Bacteria 1NRP8@1224,2VJNX@28216,COG0642@1,COG0642@2,COG2205@2,COG3614@1,COG3614@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_01084 62928.azo3640 4.1e-101 374.4 Rhodocyclales ko:K07090 ko00000 Bacteria 1MVY3@1224,2KYDN@206389,2VIZS@28216,COG0730@1,COG0730@2 NA|NA|NA S Sulfite exporter TauE/SafE HGDHCNMN_01085 1123487.KB892857_gene2451 6.1e-153 547.4 Rhodocyclales Bacteria 1N5T4@1224,2KW00@206389,2VK22@28216,COG2206@1,COG2206@2 NA|NA|NA T Domain of unknown function (DUF3391) HGDHCNMN_01086 1123487.KB892857_gene2452 1.9e-174 619.4 Betaproteobacteria Bacteria 1NXDJ@1224,2W1GY@28216,COG0642@1,COG0642@2 NA|NA|NA T Histidine kinase HGDHCNMN_01089 748247.AZKH_4578 5e-66 257.7 Rhodocyclales Bacteria 1RAPM@1224,2KW7Z@206389,2VQFZ@28216,COG2258@1,COG2258@2 NA|NA|NA S MOSC domain-containing protein-containing proteincontaining protein HGDHCNMN_01090 305700.B447_02246 1.4e-75 289.3 Rhodocyclales mak GO:0003674,GO:0003824,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019318,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704 2.7.1.4,2.7.1.59 ko:K00847,ko:K00884 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 R00760,R00867,R01201,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 iECSE_1348.ECSE_0415,iEcHS_1320.EcHS_A0462,iPC815.YPO3211,iS_1188.S0338,iYL1228.KPN_00337 Bacteria 1MU94@1224,2KVCS@206389,2VMGT@28216,COG1940@1,COG1940@2 NA|NA|NA GK ROK family HGDHCNMN_01092 1121035.AUCH01000003_gene1256 9.2e-119 433.0 Rhodocyclales cybH GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0020037,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0071944,GO:0097159,GO:1901363,GO:1902494 ko:K03620 ko02020,map02020 ko00000,ko00001 Bacteria 1MU87@1224,2KV5F@206389,2VI8M@28216,COG1969@1,COG1969@2 NA|NA|NA C Prokaryotic cytochrome b561 HGDHCNMN_01093 62928.azo3787 0.0 1119.8 Rhodocyclales hyaB GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016151,GO:0016491,GO:0022900,GO:0030288,GO:0030313,GO:0031975,GO:0032991,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0044569,GO:0045333,GO:0046872,GO:0046914,GO:0055114,GO:0071944,GO:1902494 1.12.99.6 ko:K06281 ko00633,ko01120,map00633,map01120 R08034 RC00250 ko00000,ko00001,ko01000 iSbBS512_1146.SbBS512_E2342 Bacteria 1MWFJ@1224,2KV5T@206389,2VJ52@28216,COG0374@1,COG0374@2 NA|NA|NA C Nickel-dependent hydrogenase HGDHCNMN_01094 62928.azo3786 8.9e-64 250.4 Rhodocyclales hyaA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009897,GO:0009986,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0048037,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944,GO:0098552,GO:0098567,GO:1902494 1.12.99.6 ko:K06282 ko00633,ko01120,map00633,map01120 R08034 RC00250 ko00000,ko00001,ko01000 iAPECO1_1312.APECO1_76,iUTI89_1310.UTI89_C1040 Bacteria 1MWAC@1224,2KV18@206389,2VK03@28216,COG1740@1,COG1740@2 NA|NA|NA C NiFe/NiFeSe hydrogenase small subunit C-terminal HGDHCNMN_01095 1123487.KB892864_gene2224 4.8e-61 240.7 Rhodocyclales aut 2.7.1.167,2.7.7.70 ko:K03272,ko:K21345 ko00540,ko01100,map00540,map01100 M00064 R05644,R05646 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1REW3@1224,2KW34@206389,2VR6S@28216,COG0615@1,COG0615@2 NA|NA|NA H Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose HGDHCNMN_01096 640081.Dsui_3208 2.1e-142 511.9 Rhodocyclales cysK GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03601,R04859 RC00020,RC02814,RC02821 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUBE@1224,2KVD7@206389,2VJI3@28216,COG0031@1,COG0031@2 NA|NA|NA E Pyridoxal-phosphate dependent enzyme HGDHCNMN_01097 748247.AZKH_3945 2.2e-162 578.6 Rhodocyclales patB 4.4.1.8 ko:K00842,ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 Bacteria 1MY33@1224,2KV85@206389,2VHZ6@28216,COG1168@1,COG1168@2 NA|NA|NA E Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities HGDHCNMN_01098 1183438.GKIL_3357 2.3e-69 269.6 Cyanobacteria entS ko:K08225 ko00000,ko02000 2.A.1.38 Bacteria 1G1NG@1117,COG0477@1,COG0477@2 NA|NA|NA EGP Major facilitator superfamily MFS_1 HGDHCNMN_01099 640081.Dsui_3030 2e-258 898.3 Rhodocyclales hoxF GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 ko:K18005 ko00000,ko01000 Bacteria 1MV8F@1224,2KUYG@206389,2VHW2@28216,COG1894@1,COG1894@2,COG1905@1,COG1905@2 NA|NA|NA C Respiratory-chain NADH dehydrogenase HGDHCNMN_01100 640081.Dsui_3029 5.6e-108 397.1 Rhodocyclales nuoG 1.12.1.2,1.17.1.9,1.6.5.3 ko:K00123,ko:K00336,ko:K18006 ko00190,ko00630,ko00680,ko01100,ko01120,ko01200,map00190,map00630,map00680,map01100,map01120,map01200 M00144 R00519,R11945 RC00061,RC02796 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1QVC7@1224,2KVII@206389,2VI6U@28216,COG1034@1,COG1034@2 NA|NA|NA C COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) HGDHCNMN_01101 748247.AZKH_3041 7.4e-84 316.6 Rhodocyclales hoxY GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 ko:K18007 ko00000,ko01000 Bacteria 1NS0E@1224,2KVSW@206389,2VJH8@28216,COG1941@1,COG1941@2 NA|NA|NA C NADH ubiquinone oxidoreductase, 20 HGDHCNMN_01102 748247.AZKH_3040 3.5e-221 774.2 Rhodocyclales hoxH GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 ko:K00436 R00700 ko00000,ko01000 Bacteria 1QUQ7@1224,2KVAX@206389,2VJT0@28216,COG3259@1,COG3259@2 NA|NA|NA C Belongs to the NiFe NiFeSe hydrogenase large subunit family HGDHCNMN_01103 640081.Dsui_3026 5e-39 167.5 Rhodocyclales hoxW Bacteria 1MZE1@1224,2KWJ7@206389,2VTPX@28216,COG0680@1,COG0680@2 NA|NA|NA C maturation HGDHCNMN_01105 1123487.KB892835_gene3713 9.8e-64 250.0 Rhodocyclales Bacteria 1QWG0@1224,2KZPU@206389,2WGYI@28216,COG0745@1,COG0745@2 NA|NA|NA KT Helix-turn-helix domain HGDHCNMN_01106 748247.AZKH_3967 3.5e-54 218.0 Rhodocyclales ssb ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Bacteria 1RCWT@1224,2KWHT@206389,2VR2Z@28216,COG0629@1,COG0629@2 NA|NA|NA L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism HGDHCNMN_01107 1123367.C666_00345 1.7e-160 572.4 Rhodocyclales yajR Bacteria 1MVSH@1224,2KUZ2@206389,2VITN@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HGDHCNMN_01108 748247.AZKH_3969 0.0 1576.6 Rhodocyclales uvrA ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1MW0W@1224,2KUQF@206389,2VIJE@28216,COG0178@1,COG0178@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate HGDHCNMN_01109 765913.ThidrDRAFT_4524 2.9e-24 119.4 Bacteria ko:K07039 ko00000 Bacteria COG3012@1,COG3012@2 NA|NA|NA HGDHCNMN_01110 85643.Tmz1t_3509 6.6e-66 257.3 Rhodocyclales yceH GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K03810,ko:K09915 ko00000 Bacteria 1RA13@1224,2KWEA@206389,2VQGS@28216,COG3132@1,COG3132@2 NA|NA|NA S Belongs to the UPF0502 family HGDHCNMN_01111 497321.C664_15763 5.8e-187 660.2 Rhodocyclales bhbA 5.4.99.2 ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUXX@1224,2KV3E@206389,2VIT2@28216,COG1884@1,COG1884@2,COG2185@1,COG2185@2 NA|NA|NA I Methylmalonyl-CoA mutase HGDHCNMN_01112 62928.azo0686 9.3e-141 506.5 Rhodocyclales argK GO:0003674,GO:0003824,GO:0003924,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111 ko:K07588 ko00000,ko01000 Bacteria 1MVI0@1224,2KVDF@206389,2VIRF@28216,COG1703@1,COG1703@2 NA|NA|NA E periplasmic protein kinase ArgK and related GTPases of G3E family HGDHCNMN_01114 1095769.CAHF01000005_gene1502 4.8e-150 537.7 Oxalobacteraceae ko:K07007 ko00000 Bacteria 1MUGC@1224,2VIGJ@28216,4737W@75682,COG2081@1,COG2081@2 NA|NA|NA S HI0933-like protein HGDHCNMN_01115 62928.azo3687 1.3e-50 206.5 Rhodocyclales cc43 Bacteria 1N7W9@1224,2KW5A@206389,2WEG6@28216,COG2863@1,COG2863@2 NA|NA|NA C Cytochrome C oxidase, cbb3-type, subunit III HGDHCNMN_01116 1304883.KI912532_gene2764 9.9e-26 123.2 Bacteria Bacteria COG0589@1,COG0589@2 NA|NA|NA T AMP binding HGDHCNMN_01118 1304883.KI912532_gene2762 1.5e-188 665.6 Rhodocyclales CP_0904 Bacteria 1N68M@1224,2KVZG@206389,2VH3A@28216,COG1055@1,COG1055@2 NA|NA|NA P Putative Na+/H+ antiporter HGDHCNMN_01119 1304883.KI912532_gene2761 3.5e-179 634.8 Rhodocyclales fixL 2.7.13.3 ko:K02482 ko00000,ko01000,ko01001,ko02022 Bacteria 1RCM9@1224,2KYIQ@206389,2VJUT@28216,COG4191@1,COG4191@2 NA|NA|NA T MASE1 HGDHCNMN_01120 1304883.KI912532_gene2760 2.2e-73 282.0 Rhodocyclales fixJ Bacteria 1N6WR@1224,2KYUB@206389,2VSCC@28216,COG4566@1,COG4566@2 NA|NA|NA K Flagellar regulatory protein FleQ HGDHCNMN_01121 1000565.METUNv1_03170 3.1e-111 408.7 Rhodocyclales mrdB GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0016020,GO:0022603,GO:0022604,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 ko:K05837 ko00000,ko03036 Bacteria 1MUK3@1224,2KURV@206389,2VH8Q@28216,COG0772@1,COG0772@2 NA|NA|NA M Peptidoglycan polymerase that is essential for cell wall elongation HGDHCNMN_01122 257310.BB1263 7.8e-53 214.5 Alcaligenaceae Bacteria 1MWP2@1224,2W9JI@28216,3T7YU@506,COG1574@1,COG1574@2 NA|NA|NA S Amidohydrolase family HGDHCNMN_01123 748247.AZKH_3556 2.4e-205 721.8 Rhodocyclales cmk GO:0003674,GO:0003824,GO:0003866,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009314,GO:0009423,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015939,GO:0015940,GO:0015949,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016765,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.17.7.4,2.5.1.19,2.7.1.26,2.7.4.25,2.7.7.2,6.3.2.1 ko:K00800,ko:K00945,ko:K02945,ko:K03527,ko:K03977,ko:K11753,ko:K13799 ko00240,ko00400,ko00410,ko00740,ko00770,ko00900,ko01100,ko01110,ko01130,ko01230,ko03010,map00240,map00400,map00410,map00740,map00770,map00900,map01100,map01110,map01130,map01230,map03010 M00022,M00052,M00096,M00119,M00125,M00178 R00158,R00161,R00512,R00549,R01665,R02473,R03460,R05884,R08210 RC00002,RC00017,RC00096,RC00141,RC00350,RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03009,ko03011 iEC042_1314.EC042_0998,iECNA114_1301.ECNA114_0940,iECSF_1327.ECSF_0829,iPC815.YPO1390,iPC815.YPO1391,iSDY_1059.SDY_2348 Bacteria 1MWMK@1224,2KUWK@206389,2VGZF@28216,COG0128@1,COG0128@2,COG0283@1,COG0283@2 NA|NA|NA F Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate HGDHCNMN_01124 85643.Tmz1t_3035 3.7e-283 980.3 Rhodocyclales rpsA GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113,GO:2000765,GO:2000766 1.17.7.4 ko:K02945,ko:K03527 ko00900,ko01100,ko01110,ko01130,ko03010,map00900,map01100,map01110,map01130,map03010 M00096,M00178 R05884,R08210 RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03011 Bacteria 1MVAV@1224,2KUBW@206389,2VI12@28216,COG0539@1,COG0539@2 NA|NA|NA J thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence HGDHCNMN_01125 497321.C664_11007 2.8e-42 177.6 Rhodocyclales himD GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2001141 ko:K05788 ko00000,ko03032,ko03036,ko03400 Bacteria 1MZ7M@1224,2KWNF@206389,2VSPN@28216,COG0776@1,COG0776@2 NA|NA|NA K This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control HGDHCNMN_01126 305700.B447_01071 7.5e-17 93.2 Rhodocyclales lapA ko:K08992 ko00000 Bacteria 1N4UI@1224,2KXMD@206389,2VU63@28216,COG5416@1,COG5416@2 NA|NA|NA S Pfam:DUF1049 HGDHCNMN_01127 305700.B447_01066 3.7e-173 614.4 Rhodocyclales lapB GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008653,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1903509 ko:K19804 ko00000 Bacteria 1MVDP@1224,2KU7Z@206389,2VH49@28216,COG2956@1,COG2956@2 NA|NA|NA G Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane HGDHCNMN_01128 1123487.KB892838_gene3814 5.1e-211 740.3 Rhodocyclales ugd 1.1.1.22 ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 M00014,M00129,M00361,M00362 R00286 RC00291 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW5U@1224,2KUMY@206389,2VGZI@28216,COG1004@1,COG1004@2 NA|NA|NA C Belongs to the UDP-glucose GDP-mannose dehydrogenase family HGDHCNMN_01129 748247.AZKH_3550 3.5e-147 527.7 Rhodocyclales cysM GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 ko:K01738,ko:K12339 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03132,R03601,R04859 RC00020,RC02814,RC02821,RC02876 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUBE@1224,2KV1N@206389,2VH7B@28216,COG0031@1,COG0031@2 NA|NA|NA E Belongs to the cysteine synthase cystathionine beta- synthase family HGDHCNMN_01130 62928.azo1078 3.1e-123 448.0 Rhodocyclales wlaX ko:K07501 ko00000 Bacteria 1MVZJ@1224,2KV43@206389,2VISP@28216,COG3298@1,COG3298@2 NA|NA|NA L 3'-5' exonuclease related to the exonuclease domain of PolB HGDHCNMN_01132 1000565.METUNv1_02741 2.4e-310 1070.8 Rhodocyclales thrS GO:0000166,GO:0000900,GO:0002161,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004812,GO:0004829,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006417,GO:0006418,GO:0006435,GO:0006446,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0017076,GO:0017148,GO:0019222,GO:0019538,GO:0019752,GO:0030371,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032553,GO:0032555,GO:0032559,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045182,GO:0045947,GO:0046483,GO:0046872,GO:0046914,GO:0048027,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090079,GO:0090304,GO:0097159,GO:0097367,GO:0106074,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112,GO:2000113 6.1.1.3 ko:K01868 ko00970,map00970 M00359,M00360 R03663 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iPC815.YPO2433,iSDY_1059.SDY_1814 Bacteria 1MUP2@1224,2KU9R@206389,2VHFD@28216,COG0441@1,COG0441@2 NA|NA|NA J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) HGDHCNMN_01133 62928.azo1080 3.8e-65 254.2 Rhodocyclales infC GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767 ko:K02520 ko00000,ko03012,ko03029 Bacteria 1RDD2@1224,2KVGW@206389,2VQ19@28216,COG0290@1,COG0290@2 NA|NA|NA J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins HGDHCNMN_01134 76114.ebC8 5.8e-23 112.8 Rhodocyclales rpmI GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 ko:K02916 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1N6V4@1224,2KX60@206389,2VVS9@28216,COG0291@1,COG0291@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL35 family HGDHCNMN_01135 62928.azo1082 1.5e-53 215.3 Rhodocyclales rplT GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2000113,GO:2001141 ko:K02887 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RGU2@1224,2KWC3@206389,2VRWF@28216,COG0292@1,COG0292@2 NA|NA|NA J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit HGDHCNMN_01136 85643.Tmz1t_3021 5.4e-160 570.5 Rhodocyclales pheS GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iJN746.PP_2469,iSSON_1240.SSON_1444,iYL1228.KPN_02176 Bacteria 1MVD7@1224,2KUG4@206389,2VIM9@28216,COG0016@1,COG0016@2 NA|NA|NA J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily HGDHCNMN_01137 497321.C664_11077 0.0 1137.1 Rhodocyclales pheT GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 ko:K01890 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iG2583_1286.G2583_2160,iPC815.YPO2428 Bacteria 1MWKS@1224,2KUJG@206389,2VHR1@28216,COG0072@1,COG0072@2,COG0073@1,COG0073@2 NA|NA|NA J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily HGDHCNMN_01138 76114.ebA866 1.6e-43 181.8 Rhodocyclales himA ko:K04764 ko00000,ko03032,ko03036,ko03400 Bacteria 1RH5Z@1224,2KWPS@206389,2VT12@28216,COG0776@1,COG0776@2 NA|NA|NA K This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control HGDHCNMN_01139 76114.ebB24 4.1e-41 174.1 Rhodocyclales ycgE ko:K19591,ko:K22491 M00769 ko00000,ko00002,ko01504,ko03000 Bacteria 1RGYB@1224,2KWMH@206389,2VSDF@28216,COG0789@1,COG0789@2 NA|NA|NA K transcriptional HGDHCNMN_01140 1000565.METUNv1_02835 2.3e-96 358.6 Rhodocyclales MA20_32445 ko:K07395 ko00000 Bacteria 1N057@1224,2KV6S@206389,2VHD7@28216,COG3484@1,COG3484@2 NA|NA|NA O PFAM 20S proteasome, A and B subunits HGDHCNMN_01141 62928.azo1516 1.2e-94 353.2 Rhodocyclales rsgA GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022613,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 iAF1260.b4161,iBWG_1329.BWG_3876,iECDH10B_1368.ECDH10B_4356,iECDH1ME8569_1439.ECDH1ME8569_4021,iEKO11_1354.EKO11_4148,iEcDH1_1363.EcDH1_3829,iEcolC_1368.EcolC_3849,iJO1366.b4161,iUMNK88_1353.UMNK88_5099,iY75_1357.Y75_RS21675 Bacteria 1MUEF@1224,2KVI6@206389,2VINY@28216,COG1162@1,COG1162@2 NA|NA|NA S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit HGDHCNMN_01142 497321.C664_03605 1.5e-149 536.2 Rhodocyclales htpX_2 3.4.24.84 ko:K06013 ko00900,ko01130,map00900,map01130 R09845 RC00141 ko00000,ko00001,ko01000,ko01002,ko04147 Bacteria 1MUXT@1224,2KUVU@206389,2VI1Y@28216,COG0501@1,COG0501@2 NA|NA|NA O Zn-dependent protease with chaperone function HGDHCNMN_01143 243365.CV_2368 1.4e-77 295.8 Neisseriales orn GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004536,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008946,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0016896,GO:0019439,GO:0034611,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901575 ko:K13288 ko03008,map03008 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 1R9WX@1224,2KPCE@206351,2VIA2@28216,COG1949@1,COG1949@2 NA|NA|NA L 3'-to-5' exoribonuclease specific for small oligoribonucleotides HGDHCNMN_01145 62928.azo0816 8.9e-36 156.4 Rhodocyclales rnk ko:K03624,ko:K06140 ko00000,ko03000,ko03021 Bacteria 1MZNY@1224,2KWWB@206389,2VUAK@28216,COG0782@1,COG0782@2 NA|NA|NA K Elongation factor HGDHCNMN_01146 1120999.JONM01000050_gene3330 3e-25 121.7 Betaproteobacteria Bacteria 1NPUA@1224,29PWE@1,2VYHX@28216,30AUS@2 NA|NA|NA HGDHCNMN_01148 1123367.C666_15755 3.5e-31 141.7 Rhodocyclales aarF ko:K03688 ko00000 Bacteria 1MU1Z@1224,2KZS4@206389,2VJ9H@28216,COG0661@1,COG0661@2 NA|NA|NA S ABC1 family HGDHCNMN_01149 159087.Daro_0087 6e-99 367.1 Rhodocyclales Bacteria 1QKCK@1224,2KXZG@206389,2VN0G@28216,COG1028@1,COG1028@2 NA|NA|NA IQ Enoyl-(Acyl carrier protein) reductase HGDHCNMN_01150 1163617.SCD_n01681 4.3e-68 264.2 Betaproteobacteria yaiL GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K09912 ko00000 iECW_1372.ECW_m0432,iWFL_1372.ECW_m0432 Bacteria 1N15V@1224,2VQQI@28216,COG3122@1,COG3122@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2058) HGDHCNMN_01151 1538295.JY96_10505 4.1e-29 134.4 unclassified Burkholderiales ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1KP0U@119065,1N0PQ@1224,2VUBS@28216,COG0226@1,COG0226@2 NA|NA|NA P Part of the ABC transporter complex PstSACB involved in phosphate import HGDHCNMN_01152 946483.Cenrod_0378 2.4e-93 349.4 Betaproteobacteria Bacteria 1NYF6@1224,2VPXB@28216,COG1024@1,COG1024@2 NA|NA|NA I Enoyl-CoA hydratase HGDHCNMN_01153 1286631.X805_34290 1.8e-43 181.8 unclassified Burkholderiales 2.5.1.17,6.6.1.2 ko:K02230,ko:K19221 ko00860,ko01100,map00860,map01100 M00122 R01492,R05220,R05227,R07268 RC00533,RC02000 ko00000,ko00001,ko00002,ko01000 Bacteria 1KNKK@119065,1MZR4@1224,2VTKC@28216,COG3411@1,COG3411@2 NA|NA|NA C Thioredoxin-like [2Fe-2S] ferredoxin HGDHCNMN_01154 497321.C664_15303 1.1e-146 526.2 Rhodocyclales cbiH 2.1.1.131,2.1.1.133,2.1.1.271,2.1.1.272,3.7.1.12 ko:K02016,ko:K05934,ko:K05936,ko:K13541,ko:K21479 ko00860,ko01100,ko02010,map00860,map01100,map02010 M00240 R05180,R05181,R05809,R05810,R07772,R11580 RC00003,RC01293,RC01294,RC01545,RC02049,RC02097,RC03471,RC03479 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 Bacteria 1MU79@1224,2KUEX@206389,2VIG5@28216,COG1010@1,COG1010@2 NA|NA|NA H Tetrapyrrole (Corrin/Porphyrin) Methylases HGDHCNMN_01155 1121035.AUCH01000015_gene2531 1e-45 189.5 Rhodocyclales cbiG 2.1.1.131,2.1.1.133,2.1.1.271,3.7.1.12 ko:K02189,ko:K05936,ko:K13541 ko00860,ko01100,map00860,map01100 R05180,R05181,R05809,R05810,R07772 RC00003,RC01293,RC01294,RC01545,RC02049,RC02097,RC03471 ko00000,ko00001,ko01000 Bacteria 1RHAC@1224,2KWNX@206389,2VSRI@28216,COG2073@1,COG2073@2 NA|NA|NA H Cobalamin synthesis G C-terminus HGDHCNMN_01156 497321.C664_15293 4.3e-109 401.0 Rhodocyclales cbiG 2.1.1.131,2.1.1.133,2.1.1.271,3.7.1.12 ko:K02189,ko:K05936,ko:K13541 ko00860,ko01100,map00860,map01100 R05180,R05181,R05809,R05810,R07772 RC00003,RC01293,RC01294,RC01545,RC02049,RC02097,RC03471 ko00000,ko00001,ko01000 Bacteria 1MWE6@1224,2KUBU@206389,2VP0M@28216,COG2073@1,COG2073@2 NA|NA|NA H Cobalamin synthesis G N-terminal HGDHCNMN_01157 1121035.AUCH01000015_gene2529 7.8e-111 406.8 Rhodocyclales cbiL 2.1.1.130,2.1.1.151 ko:K03394 ko00860,ko01100,map00860,map01100 R03948,R05808 RC00003,RC01035,RC01662 ko00000,ko00001,ko01000 iAF987.Gmet_0482 Bacteria 1MV3G@1224,2KVCN@206389,2VK3F@28216,COG2243@1,COG2243@2 NA|NA|NA H Tetrapyrrole (Corrin/Porphyrin) Methylases HGDHCNMN_01158 748247.AZKH_4159 5.7e-167 594.0 Rhodocyclales cobL GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.1.1.132 ko:K00595 ko00860,ko01100,map00860,map01100 R05149 RC00003,RC01279 ko00000,ko00001,ko01000 iNJ661.Rv2072c Bacteria 1MVJX@1224,2KVCV@206389,2VME3@28216,COG2241@1,COG2241@2,COG2242@1,COG2242@2 NA|NA|NA H precorrin-6y C5,15-methyltransferase HGDHCNMN_01159 497321.C664_15278 1.7e-173 615.5 Rhodocyclales cbiD 2.1.1.195 ko:K02006,ko:K02188 ko00860,ko01100,ko02010,map00860,map01100,map02010 M00245,M00246 R07773 RC00003,RC02051 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.18,3.A.1.22,3.A.1.23 Bacteria 1MXU3@1224,2KUJC@206389,2VITG@28216,COG1903@1,COG1903@2 NA|NA|NA H Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A HGDHCNMN_01160 640081.Dsui_2961 2.9e-101 374.8 Rhodocyclales cobH 5.4.99.60,5.4.99.61 ko:K02006,ko:K06042 ko00860,ko01100,ko02010,map00860,map01100,map02010 M00245,M00246 R05177,R05814 RC01292,RC01980 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.18,3.A.1.22,3.A.1.23 Bacteria 1MX1E@1224,2KUIA@206389,2VNZM@28216,COG2082@1,COG2082@2 NA|NA|NA H Precorrin-8X methylmutase CbiC CobH HGDHCNMN_01161 497321.C664_15268 1.3e-133 482.6 Rhodocyclales cbiX 4.99.1.3,4.99.1.4,5.4.99.60,5.4.99.61 ko:K03794,ko:K03795,ko:K06042 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02864,R05177,R05807,R05814 RC01012,RC01292,RC01980 ko00000,ko00001,ko00002,ko01000 Bacteria 1PRGR@1224,2KU6G@206389,2VIJJ@28216,COG2138@1,COG2138@2 NA|NA|NA S CbiX HGDHCNMN_01162 1121035.AUCH01000015_gene2524 8.5e-129 466.5 Rhodocyclales cobM 1.3.1.76,2.1.1.131,2.1.1.133,2.1.1.271,3.7.1.12,4.99.1.4 ko:K02304,ko:K05936,ko:K13541 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02864,R03947,R05180,R05181,R05809,R05810,R07772 RC00003,RC01012,RC01034,RC01293,RC01294,RC01545,RC02049,RC02097,RC03471 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVYY@1224,2KUT3@206389,2VHWE@28216,COG2875@1,COG2875@2 NA|NA|NA H Belongs to the precorrin methyltransferase family HGDHCNMN_01163 497321.C664_15258 4.3e-59 234.6 Rhodocyclales cbiM ko:K02007 ko02010,map02010 M00245,M00246 ko00000,ko00001,ko00002,ko02000 3.A.1.18,3.A.1.22,3.A.1.23 Bacteria 1MXW7@1224,2KY3P@206389,2VP3N@28216,COG0310@1,COG0310@2 NA|NA|NA P Cobalt uptake substrate-specific transmembrane region HGDHCNMN_01164 1249627.D779_3368 8.6e-50 203.4 Chromatiales aer Bacteria 1RH32@1224,1T530@1236,1X2VM@135613,COG3829@1,COG3829@2 NA|NA|NA KT PAS fold HGDHCNMN_01165 395494.Galf_2353 1.7e-106 393.3 Nitrosomonadales cetA Bacteria 1R5W9@1224,2VKQP@28216,44V12@713636,COG0840@1,COG0840@2 NA|NA|NA NT SMART chemotaxis sensory transducer HGDHCNMN_01166 1333856.L686_18135 6.4e-176 624.8 Gammaproteobacteria 2.1.2.9 ko:K00604,ko:K06867 ko00670,ko00970,map00670,map00970 R03940 RC00026,RC00165 ko00000,ko00001,ko01000 Bacteria 1MWKT@1224,1RSNK@1236,COG0666@1,COG0666@2 NA|NA|NA S ankyrin repeats HGDHCNMN_01167 1288826.MSNKSG1_16726 5e-88 331.3 Gammaproteobacteria ko:K15045 ko05164,map05164 ko00000,ko00001 Bacteria 1R9CR@1224,1RZ04@1236,COG0535@1,COG0535@2 NA|NA|NA S Radical SAM superfamily HGDHCNMN_01168 85643.Tmz1t_0704 4.3e-246 857.1 Rhodocyclales ilvA GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 iJN678.ilvA Bacteria 1MVWJ@1224,2KUM9@206389,2VI5U@28216,COG1171@1,COG1171@2 NA|NA|NA E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA HGDHCNMN_01169 748247.AZKH_4344 1.4e-35 155.6 Rhodocyclales Bacteria 1MZ5K@1224,2KWRZ@206389,2VU19@28216,COG0251@1,COG0251@2 NA|NA|NA J translation initiation inhibitor, yjgF family HGDHCNMN_01170 76114.ebA1210 5.4e-43 181.8 Rhodocyclales ko:K12686 ko00000,ko02000,ko02044 1.B.12.8 Bacteria 1MWDI@1224,2KXBE@206389,2VTBY@28216,COG3240@1,COG3240@2 NA|NA|NA I GDSL-like Lipase/Acylhydrolase HGDHCNMN_01182 864051.BurJ1DRAFT_3699 9.4e-66 257.3 unclassified Burkholderiales cusB ko:K13888 M00709 ko00000,ko00002,ko02000 8.A.1 Bacteria 1KNGQ@119065,1RC4B@1224,2VSI9@28216,COG0845@1,COG0845@2 NA|NA|NA M Barrel-sandwich domain of CusB or HlyD membrane-fusion HGDHCNMN_01183 1454004.AW11_01766 1.9e-153 549.7 unclassified Betaproteobacteria secA2 Bacteria 1KPQR@119066,1MUJZ@1224,2VHDH@28216,COG0653@1,COG0653@2 NA|NA|NA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane HGDHCNMN_01184 1454004.AW11_01767 3.5e-177 628.6 Betaproteobacteria ko:K16922 ko00000,ko01002 Bacteria 1MW9I@1224,2VIUH@28216,COG1994@1,COG1994@2 NA|NA|NA M membrane-associated Zn-dependent proteases 1 HGDHCNMN_01185 1454004.AW11_01768 1.3e-92 347.1 Betaproteobacteria ko:K01993 ko00000 Bacteria 1N97Q@1224,2VH3J@28216,COG0845@1,COG0845@2 NA|NA|NA M Barrel-sandwich domain of CusB or HlyD membrane-fusion HGDHCNMN_01186 1454004.AW11_00562 1.5e-19 102.1 Betaproteobacteria Bacteria 1N2FP@1224,2E1GZ@1,2VVNJ@28216,32WV7@2 NA|NA|NA HGDHCNMN_01187 305700.B447_10393 5.4e-84 318.5 Rhodocyclales ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2KY4B@206389,2VGZ8@28216,COG0840@1,COG0840@2 NA|NA|NA NT Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). HGDHCNMN_01188 76114.ebA6023 8.6e-167 593.2 Rhodocyclales Bacteria 1MUMN@1224,2KV72@206389,2VHJ0@28216,COG2866@1,COG2866@2 NA|NA|NA E Zinc carboxypeptidase HGDHCNMN_01189 196367.JNFG01000005_gene7310 7.7e-124 450.7 Burkholderiaceae yjiN GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1K1CA@119060,1MX3G@1224,2VJZ1@28216,COG2733@1,COG2733@2 NA|NA|NA S Protein of unknown function (DUF445) HGDHCNMN_01190 497321.C664_00305 3.9e-102 377.9 Rhodocyclales yaaA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:1901700 ko:K09861 ko00000 Bacteria 1MUAF@1224,2KVHY@206389,2VH23@28216,COG3022@1,COG3022@2 NA|NA|NA S Belongs to the UPF0246 family HGDHCNMN_01191 748247.AZKH_4309 1.1e-86 326.6 Rhodocyclales fieF Bacteria 1MUDS@1224,2KUD8@206389,2VJ1J@28216,COG0053@1,COG0053@2 NA|NA|NA P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family HGDHCNMN_01192 497321.C664_00840 4.5e-305 1053.5 Rhodocyclales relA GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5,3.1.7.2 ko:K00951,ko:K01139 ko00230,map00230 R00336,R00429 RC00002,RC00078 ko00000,ko00001,ko01000,ko03009 iSFV_1184.SFV_2673 Bacteria 1MU44@1224,2KV96@206389,2VHSK@28216,COG0317@1,COG0317@2 NA|NA|NA KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance HGDHCNMN_01193 1123367.C666_10070 2.1e-89 335.5 Rhodocyclales mtfA GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006508,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009889,GO:0010468,GO:0010556,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0043170,GO:0043433,GO:0044092,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0050789,GO:0050794,GO:0051090,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0065009,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1903506,GO:2000112,GO:2001141 ko:K09933 ko00000,ko01002 Bacteria 1RAHF@1224,2KVI8@206389,2VJTJ@28216,COG3228@1,COG3228@2 NA|NA|NA S Belongs to the MtfA family HGDHCNMN_01194 76114.ebA6533 4.5e-47 194.1 Rhodocyclales Bacteria 1N6XP@1224,2KYBE@206389,2VSGR@28216,COG5622@1,COG5622@2 NA|NA|NA N Protein required for attachment to host cells HGDHCNMN_01195 1454004.AW11_03333 1.3e-31 143.7 Proteobacteria 3.5.1.81 ko:K06015 R02192 RC00064,RC00328 ko00000,ko01000 Bacteria 1NGXW@1224,COG0044@1,COG0044@2 NA|NA|NA F PEP-CTERM motif HGDHCNMN_01196 159087.Daro_1975 1.7e-37 162.5 Rhodocyclales ligT GO:0003674,GO:0003824,GO:0004112,GO:0004113,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008081,GO:0008104,GO:0008150,GO:0008452,GO:0008664,GO:0009966,GO:0010646,GO:0010738,GO:0016787,GO:0016788,GO:0016874,GO:0016886,GO:0023051,GO:0033036,GO:0034237,GO:0042578,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:0140098,GO:1902531 3.1.4.58,3.5.1.42 ko:K01975,ko:K03743 ko00760,map00760 R02322 RC00100 ko00000,ko00001,ko01000,ko03016 Bacteria 1RDB2@1224,2KWXS@206389,2VTZU@28216,COG1514@1,COG1514@2 NA|NA|NA J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester HGDHCNMN_01197 1123367.C666_10055 2.1e-69 268.5 Rhodocyclales ispF GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008270,GO:0008685,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016849,GO:0030145,GO:0042180,GO:0042181,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.228,2.7.7.60,4.6.1.12 ko:K00554,ko:K00991,ko:K01770,ko:K12506 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R00597,R05633,R05637 RC00002,RC00003,RC00334,RC01440 ko00000,ko00001,ko00002,ko01000,ko03016 iPC815.YPO3360 Bacteria 1MVHA@1224,2KWCF@206389,2VR7F@28216,COG0245@1,COG0245@2 NA|NA|NA I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) HGDHCNMN_01198 62928.azo1682 3.3e-91 341.3 Rhodocyclales ispD GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016020,GO:0016114,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044464,GO:0046490,GO:0046872,GO:0046914,GO:0050518,GO:0051483,GO:0051484,GO:0070567,GO:0071704,GO:0071944,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.405,2.7.7.40,2.7.7.60,4.6.1.12 ko:K00991,ko:K12506,ko:K21030,ko:K21681 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 M00096 R01525,R02921,R05633,R05637 RC00002,RC00089,RC01440 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS20335 Bacteria 1MY3B@1224,2KVUZ@206389,2VMD6@28216,COG1211@1,COG1211@2 NA|NA|NA I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) HGDHCNMN_01199 62928.azo1681 6.5e-131 474.2 Rhodocyclales Bacteria 1NDBI@1224,2KUDC@206389,2VJ4P@28216,COG3174@1,COG3174@2 NA|NA|NA S Domain of unknown function (DUF4010) HGDHCNMN_01201 1000565.METUNv1_03343 1.3e-76 292.7 Rhodocyclales cobO GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008817,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019250,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 ko:K16092,ko:K19221 ko00860,ko01100,map00860,map01100 M00122 R01492,R05220,R07268 RC00533 ko00000,ko00001,ko00002,ko01000,ko02000 1.B.14.3 iAF1260.b1270,iB21_1397.B21_01256,iBWG_1329.BWG_1099,iECABU_c1320.ECABU_c15500,iECBD_1354.ECBD_2352,iECB_1328.ECB_01246,iECDH10B_1368.ECDH10B_1385,iECDH1ME8569_1439.ECDH1ME8569_1209,iECD_1391.ECD_01246,iECIAI1_1343.ECIAI1_1288,iECO111_1330.ECO111_1649,iECO26_1355.ECO26_1834,iETEC_1333.ETEC_1372,iEcDH1_1363.EcDH1_2379,iEcHS_1320.EcHS_A1379,iJO1366.b1270,iJR904.b1270,iLF82_1304.LF82_0253,iNRG857_1313.NRG857_06515,iUMNK88_1353.UMNK88_1599,iY75_1357.Y75_RS06640,iYL1228.KPN_01266,ic_1306.c1735 Bacteria 1MUN6@1224,2KVDE@206389,2VM7I@28216,COG2109@1,COG2109@2 NA|NA|NA H Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids HGDHCNMN_01202 62928.azo3553 3.9e-78 298.1 Rhodocyclales fhuC 3.6.3.34 ko:K01990,ko:K02013 ko02010,map02010 M00240,M00254 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.14 Bacteria 1MUNG@1224,2KW3Z@206389,2VRFJ@28216,COG1120@1,COG1120@2 NA|NA|NA HP COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components HGDHCNMN_01203 85643.Tmz1t_3756 1e-110 406.8 Rhodocyclales btuC 3.6.3.34 ko:K02013,ko:K02015 ko02010,map02010 M00240 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 Bacteria 1MV9W@1224,2KVFR@206389,2VK1S@28216,COG0609@1,COG0609@2 NA|NA|NA P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily HGDHCNMN_01204 62928.azo3555 1.2e-144 520.4 Rhodocyclales btuB GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0006810,GO:0006811,GO:0008150,GO:0015075,GO:0015267,GO:0015318,GO:0015889,GO:0015893,GO:0016020,GO:0016021,GO:0019904,GO:0022803,GO:0022838,GO:0022857,GO:0031224,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0055085,GO:0071702,GO:0071705 ko:K16092 ko00000,ko02000 1.B.14.3 iECB_1328.ECB_03851,iECP_1309.ECP_4183,iSF_1195.SF4048,iS_1188.S3696 Bacteria 1MW63@1224,2KVFE@206389,2VH64@28216,COG4206@1,COG4206@2 NA|NA|NA H COG4206 Outer membrane cobalamin receptor protein HGDHCNMN_01205 1304883.KI912532_gene1004 9.2e-145 520.8 Rhodocyclales btuB ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1MW63@1224,2KWSQ@206389,2VH64@28216,COG4206@1,COG4206@2 NA|NA|NA H TonB dependent receptor HGDHCNMN_01206 497321.C664_15068 7.1e-66 256.9 Rhodocyclales cobU 2.7.1.156,2.7.7.62 ko:K02231 ko00860,ko01100,map00860,map01100 M00122 R05221,R05222,R06558 RC00002,RC00428 ko00000,ko00001,ko00002,ko01000 Bacteria 1RH0A@1224,2KWMR@206389,2VSQI@28216,COG2087@1,COG2087@2 NA|NA|NA H Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate HGDHCNMN_01207 748247.AZKH_0609 9e-147 526.6 Rhodocyclales cobT GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 ko:K00768 ko00860,ko01100,map00860,map01100 M00122 R04148 RC00033,RC00063 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVAM@1224,2KUUH@206389,2VJTR@28216,COG2038@1,COG2038@2 NA|NA|NA F Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) HGDHCNMN_01208 748247.AZKH_0608 2.8e-84 318.5 Rhodocyclales cobS GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008818,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.8.26 ko:K02233 ko00860,ko01100,map00860,map01100 M00122 R05223,R11174 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 1RHCC@1224,2KW7X@206389,2VJR1@28216,COG0368@1,COG0368@2 NA|NA|NA H Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate HGDHCNMN_01209 85643.Tmz1t_3764 5.4e-74 283.9 Rhodocyclales cobC 3.1.3.3,3.1.3.73 ko:K02226,ko:K22305 ko00260,ko00680,ko00860,ko01100,ko01120,ko01130,map00260,map00680,map00860,map01100,map01120,map01130 M00122 R00582,R04594,R11173 RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1N14H@1224,2KWWS@206389,2VU12@28216,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase family HGDHCNMN_01211 1242864.D187_009200 4.3e-131 475.3 Proteobacteria 1.16.3.3 ko:K06324,ko:K22348,ko:K22349 ko00000,ko01000 Bacteria 1MU0J@1224,COG2132@1,COG2132@2 NA|NA|NA Q Multi-copper HGDHCNMN_01212 748247.AZKH_4393 4.4e-104 384.4 Betaproteobacteria cpo 1.11.1.10 ko:K00433 ko00000,ko01000 Bacteria 1QXP7@1224,2VPPV@28216,COG0596@1,COG0596@2 NA|NA|NA S Alpha/beta hydrolase family HGDHCNMN_01213 580332.Slit_1812 1.7e-75 290.4 Nitrosomonadales Bacteria 1R4K1@1224,2VPYX@28216,44W5W@713636,COG2010@1,COG2010@2 NA|NA|NA C Cytochrome c HGDHCNMN_01214 395495.Lcho_3791 5.4e-46 191.0 unclassified Burkholderiales ko:K07152 ko00000,ko03029 Bacteria 1KNUB@119065,1N19Q@1224,2VQSJ@28216,COG1999@1,COG1999@2 NA|NA|NA S PFAM electron transport protein SCO1 SenC HGDHCNMN_01216 1000565.METUNv1_03569 5.3e-81 307.4 Rhodocyclales Bacteria 1RAQ9@1224,2KWRN@206389,2VQ5G@28216,COG2995@1,COG2995@2 NA|NA|NA S Paraquat-inducible protein A HGDHCNMN_01217 1000565.METUNv1_03570 2.8e-85 321.6 Rhodocyclales ko:K03808 ko00000 Bacteria 1MWG1@1224,2KW39@206389,2VMXT@28216,COG2995@1,COG2995@2 NA|NA|NA S Paraquat-inducible protein A HGDHCNMN_01218 1000565.METUNv1_03571 1.3e-187 662.9 Rhodocyclales pqiB ko:K02067,ko:K06192 ko02010,map02010 M00210,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1MU1T@1224,2KV55@206389,2VJ44@28216,COG1463@1,COG1463@2,COG3008@1,COG3008@2 NA|NA|NA Q MlaD protein HGDHCNMN_01219 748247.AZKH_3651 4.1e-44 184.5 Rhodocyclales Bacteria 1REM7@1224,29DIQ@1,2KWHW@206389,2VS61@28216,300GG@2 NA|NA|NA S Protein of unknown function (DUF3617) HGDHCNMN_01220 1000565.METUNv1_03572 1.2e-42 179.9 Rhodocyclales ko:K09857 ko00000 Bacteria 1PDK1@1224,2KXF4@206389,2W9HR@28216,COG3009@1,COG3009@2 NA|NA|NA S ABC-type transport auxiliary lipoprotein component HGDHCNMN_01221 1000565.METUNv1_03356 7.4e-75 287.0 Rhodocyclales clpP 3.4.21.92 ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Bacteria 1R9T1@1224,2KXNI@206389,2VJWS@28216,COG0740@1,COG0740@2 NA|NA|NA OU Clp protease HGDHCNMN_01222 1304883.KI912532_gene2761 6.2e-150 537.7 Rhodocyclales fixL 2.7.13.3 ko:K02482 ko00000,ko01000,ko01001,ko02022 Bacteria 1RCM9@1224,2KYIQ@206389,2VJUT@28216,COG4191@1,COG4191@2 NA|NA|NA T MASE1 HGDHCNMN_01223 760117.JN27_05190 4.3e-178 630.9 Oxalobacteraceae dctA ko:K11103 ko02020,map02020 ko00000,ko00001,ko02000 2.A.23.1.3,2.A.23.1.6,2.A.23.1.7 Bacteria 1MU0Q@1224,2VJ87@28216,472QN@75682,COG1301@1,COG1301@2 NA|NA|NA U Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate HGDHCNMN_01224 1235457.C404_05920 4.5e-37 161.0 Burkholderiaceae Bacteria 1KDWD@119060,1NPUA@1224,29PWE@1,2VYHX@28216,30AUS@2 NA|NA|NA HGDHCNMN_01225 1121035.AUCH01000022_gene3204 2e-89 335.5 Rhodocyclales sfsA GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005975,GO:0006355,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0044238,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 ko:K06206 ko00000 Bacteria 1MUC3@1224,2KXXD@206389,2W0B5@28216,COG1489@1,COG1489@2 NA|NA|NA S Sugar fermentation stimulation protein HGDHCNMN_01226 76114.ebA5059 1.5e-68 266.5 Rhodocyclales ko:K07088 ko00000 Bacteria 1PINE@1224,2KZZT@206389,2VNP9@28216,COG0679@1,COG0679@2 NA|NA|NA S Membrane transport protein HGDHCNMN_01227 322710.Avin_42060 9.6e-105 386.7 Gammaproteobacteria ko:K18900 M00698 ko00000,ko00002,ko01504,ko03000 Bacteria 1MV06@1224,1RPI0@1236,COG0583@1,COG0583@2 NA|NA|NA K transcriptional regulator HGDHCNMN_01228 159087.Daro_2761 5.8e-148 530.4 Rhodocyclales Bacteria 1MVEH@1224,2KVKF@206389,2VH1Q@28216,COG0667@1,COG0667@2 NA|NA|NA C oxidoreductases (related to aryl-alcohol dehydrogenases) HGDHCNMN_01229 748280.NH8B_1754 3.4e-153 548.1 Neisseriales benE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K05782 ko00000,ko02000 2.A.46.1 Bacteria 1MUS1@1224,2KPC2@206351,2VIN0@28216,COG3135@1,COG3135@2 NA|NA|NA Q benzoate membrane transport protein HGDHCNMN_01230 543728.Vapar_6102 1.6e-112 412.9 Comamonadaceae Bacteria 1MVUZ@1224,2VJQD@28216,4AIEG@80864,COG3287@1,COG3287@2 NA|NA|NA S FIST_C HGDHCNMN_01231 640081.Dsui_1009 2.1e-100 373.6 Betaproteobacteria 2.7.13.3 ko:K20974 ko02020,ko02025,map02020,map02025 M00820 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1NC9X@1224,2WGIN@28216,COG0784@1,COG0784@2,COG2202@1,COG2202@2,COG5002@1,COG5002@2 NA|NA|NA T Histidine kinase HGDHCNMN_01232 62928.azo1347 4.7e-11 72.8 Rhodocyclales Bacteria 1NNNE@1224,2DTX1@1,2KXGV@206389,2VYM2@28216,33N25@2 NA|NA|NA S Protein of unknown function (DUF3149) HGDHCNMN_01233 62928.azo1345 1.7e-191 675.6 Rhodocyclales ccoG Bacteria 1MVFY@1224,2KUC2@206389,2VHRH@28216,COG0348@1,COG0348@2 NA|NA|NA C Cytochrome C oxidase accessory protein HGDHCNMN_01234 929562.Emtol_0826 3.1e-102 379.0 Cytophagia 1.8.5.4 ko:K17218 ko00920,map00920 R10152 RC03155 ko00000,ko00001,ko01000 Bacteria 47N6I@768503,4NEK6@976,COG0446@1,COG0446@2 NA|NA|NA S Pyridine nucleotide-disulphide oxidoreductase HGDHCNMN_01238 1297742.A176_01414 3.5e-66 258.8 Proteobacteria ko:K06905 ko00000 Bacteria 1NKC5@1224,COG3500@1,COG3500@2 NA|NA|NA S Late control gene D protein HGDHCNMN_01239 1123399.AQVE01000004_gene2676 3e-66 258.8 Gammaproteobacteria Bacteria 1RJAV@1224,1SP9V@1236,COG3485@1,COG3485@2 NA|NA|NA Q protocatechuate 3,4-dioxygenase HGDHCNMN_01241 502025.Hoch_1541 4.7e-34 152.1 Proteobacteria Bacteria 1PBN2@1224,2CDYU@1,34CBY@2 NA|NA|NA HGDHCNMN_01242 1278073.MYSTI_04382 5.1e-68 264.2 Myxococcales ko:K11904 ko03070,map03070 M00334 ko00000,ko00001,ko00002,ko02044 3.A.23.1 Bacteria 1N48V@1224,2X8VT@28221,2Z0KN@29,434GF@68525,COG3501@1,COG3501@2 NA|NA|NA S Rhs element vgr protein HGDHCNMN_01243 1123399.AQVE01000004_gene2672 5.8e-59 234.2 Proteobacteria Bacteria 1P2UP@1224,2FC2D@1,3446B@2 NA|NA|NA HGDHCNMN_01244 1123399.AQVE01000004_gene2671 4.4e-28 131.0 Proteobacteria Bacteria 1R0N6@1224,COG3628@1,COG3628@2 NA|NA|NA S GPW Gp25 family protein HGDHCNMN_01245 1123399.AQVE01000004_gene2670 2.2e-80 306.6 Proteobacteria Bacteria 1R96N@1224,COG3299@1,COG3299@2 NA|NA|NA S homolog of phage Mu protein gp47 HGDHCNMN_01247 987059.RBXJA2T_02772 5.3e-160 571.6 unclassified Burkholderiales 3.4.21.26 ko:K01322 ko04614,map04614 ko00000,ko00001,ko01000,ko01002 Bacteria 1KNCC@119065,1NZ7N@1224,2VPBK@28216,COG1505@1,COG1505@2 NA|NA|NA M Prolyl oligopeptidase, N-terminal beta-propeller domain HGDHCNMN_01248 216591.BCAL0485 3.4e-190 671.4 Burkholderiaceae gatB GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.12,6.3.5.6,6.3.5.7 ko:K01876,ko:K02434 ko00970,ko01100,map00970,map01100 M00359,M00360 R03905,R04212,R05577 RC00010,RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 1K1TI@119060,1MUKG@1224,2VI3A@28216,COG0064@1,COG0064@2 NA|NA|NA J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) HGDHCNMN_01249 497321.C664_13949 4.4e-30 137.9 Rhodocyclales Bacteria 1N431@1224,2EBEM@1,2KWYN@206389,2VXHJ@28216,335F7@2 NA|NA|NA S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology HGDHCNMN_01250 748247.AZKH_0130 1e-209 736.1 Rhodocyclales gatA 6.3.5.6,6.3.5.7 ko:K02433 ko00970,ko01100,map00970,map01100 R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 Bacteria 1MUVQ@1224,2KUD1@206389,2VIG3@28216,COG0154@1,COG0154@2 NA|NA|NA J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) HGDHCNMN_01251 748247.AZKH_0131 5.3e-33 146.7 Rhodocyclales gatC 6.3.5.6,6.3.5.7 ko:K02435 ko00970,ko01100,map00970,map01100 R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 iAF987.Gmet_0076 Bacteria 1MZQP@1224,2KWWQ@206389,2VUFB@28216,COG0721@1,COG0721@2 NA|NA|NA J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) HGDHCNMN_01252 1123487.KB892834_gene2786 6.2e-180 636.7 Rhodocyclales mreB GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005886,GO:0007049,GO:0008150,GO:0008360,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0032505,GO:0042802,GO:0043093,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051301,GO:0051302,GO:0051782,GO:0051983,GO:0065007,GO:0065008,GO:0071944 ko:K03569 ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 Bacteria 1MUMW@1224,2KUHG@206389,2VIR9@28216,COG1077@1,COG1077@2 NA|NA|NA D Rod shape-determining protein MreB HGDHCNMN_01253 62928.azo0175 4.6e-94 351.3 Rhodocyclales mreC GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 ko:K03570 ko00000,ko03036 9.B.157.1 Bacteria 1N8ZS@1224,2KUC9@206389,2VK0Y@28216,COG1792@1,COG1792@2 NA|NA|NA M Involved in formation and maintenance of cell shape HGDHCNMN_01254 305700.B447_06005 2.3e-66 258.5 Rhodocyclales mreD GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 ko:K03571 ko00000,ko03036 9.B.157.1 Bacteria 1RBNF@1224,2KW9X@206389,2VQQ3@28216,COG2891@1,COG2891@2 NA|NA|NA M shape-determining protein HGDHCNMN_01255 1123487.KB892834_gene2783 1.3e-273 948.7 Rhodocyclales mrdA GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 ko:K05515 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011 iAF987.Gmet_0928,iEcE24377_1341.EcE24377A_0661,iPC815.YPO2604 Bacteria 1MV8C@1224,2KUYH@206389,2VHBZ@28216,COG0768@1,COG0768@2 NA|NA|NA M Catalyzes cross-linking of the peptidoglycan cell wall HGDHCNMN_01256 76114.ebA3041 1e-143 516.5 Rhodocyclales mrdB GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0016020,GO:0022603,GO:0022604,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 ko:K05837 ko00000,ko03036 Bacteria 1MUK3@1224,2KURV@206389,2VH8Q@28216,COG0772@1,COG0772@2 NA|NA|NA M Peptidoglycan polymerase that is essential for cell wall elongation HGDHCNMN_01257 305700.B447_06020 1.1e-54 220.7 Rhodocyclales rlpA GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 ko:K03642 ko00000 Bacteria 1MZ8S@1224,2KUPW@206389,2VJAN@28216,COG0797@1,COG0797@2,COG3087@1,COG3087@2 NA|NA|NA DM Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides HGDHCNMN_01258 640081.Dsui_1349 6.1e-18 96.3 Rhodocyclales Bacteria 1N9E0@1224,2EFQJ@1,2KX5N@206389,2VWUK@28216,339GI@2 NA|NA|NA HGDHCNMN_01260 62928.azo0146 2.4e-124 451.8 Rhodocyclales parB ko:K03497 ko00000,ko03000,ko03036,ko04812 Bacteria 1MW2E@1224,2KU8M@206389,2VIG0@28216,COG1475@1,COG1475@2 NA|NA|NA K Belongs to the ParB family HGDHCNMN_01261 748247.AZKH_0109 4.5e-119 434.1 Rhodocyclales parA ko:K03496 ko00000,ko03036,ko04812 Bacteria 1MV43@1224,2KV5R@206389,2VHNK@28216,COG1192@1,COG1192@2 NA|NA|NA D involved in chromosome partitioning HGDHCNMN_01262 748247.AZKH_0108 1.4e-62 246.1 Rhodocyclales rsmG GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 ko:K03501 ko00000,ko01000,ko03009,ko03036 Bacteria 1MY0K@1224,2KWCK@206389,2VR3B@28216,COG0357@1,COG0357@2 NA|NA|NA J Specifically methylates the N7 position of guanine in position 527 of 16S rRNA HGDHCNMN_01263 62928.azo0141 0.0 1102.8 Rhodocyclales gidA GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 ko:K03495 R08701 RC00053,RC00209,RC00870 ko00000,ko03016,ko03036 Bacteria 1MU6F@1224,2KUAA@206389,2VIGG@28216,COG0445@1,COG0445@2 NA|NA|NA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 HGDHCNMN_01265 1249627.D779_3435 5.2e-31 141.7 Gammaproteobacteria Bacteria 1NM6K@1224,1SW7N@1236,2CEHR@1,33D10@2 NA|NA|NA HGDHCNMN_01267 1121035.AUCH01000016_gene2125 3.5e-195 688.0 Rhodocyclales nirN Bacteria 1PYK3@1224,2KU6N@206389,2VIU7@28216,COG2010@1,COG2010@2,COG3391@1,COG3391@2 NA|NA|NA C cytochrome HGDHCNMN_01270 1198452.Jab_1c00630 4.7e-60 237.3 Oxalobacteraceae MA20_15105 Bacteria 1RCZK@1224,2VR7G@28216,477AV@75682,COG3832@1,COG3832@2 NA|NA|NA S Activator of Hsp90 ATPase homolog 1-like protein HGDHCNMN_01271 1454004.AW11_04028 2.3e-199 702.2 Betaproteobacteria Bacteria 1R48M@1224,2VJUM@28216,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeat HGDHCNMN_01272 1454004.AW11_03277 7.4e-142 510.4 Proteobacteria Bacteria 1R852@1224,COG3621@1,COG3621@2 NA|NA|NA S Pfam Patatin HGDHCNMN_01273 324925.Ppha_1253 3.1e-59 237.3 Chlorobi ko:K21440 ko00000,ko04131 Bacteria 1FDZU@1090,COG2319@1,COG2319@2 NA|NA|NA S WD-40 repeat protein HGDHCNMN_01274 1157708.KB907450_gene5229 6.2e-65 254.2 Comamonadaceae guaA_2 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1MV9U@1224,2VQEC@28216,4ADVM@80864,COG0518@1,COG0518@2 NA|NA|NA F Peptidase C26 HGDHCNMN_01275 497321.C664_13344 1.1e-187 662.9 Rhodocyclales yegD ko:K04046 ko00000,ko03110 1.A.33 Bacteria 1MXBT@1224,2KVUR@206389,2VHDP@28216,COG0443@1,COG0443@2 NA|NA|NA O Belongs to the heat shock protein 70 family HGDHCNMN_01276 159087.Daro_1881 1.7e-44 185.3 Rhodocyclales yajD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.1.1.148 ko:K03465 ko00240,ko00670,ko01100,map00240,map00670,map01100 R06613 RC00022,RC00332 ko00000,ko00001,ko01000 Bacteria 1RGZQ@1224,2KWRE@206389,2VSZE@28216,COG1403@1,COG1403@2 NA|NA|NA L HNH nucleases HGDHCNMN_01277 748247.AZKH_0493 3e-250 871.3 Rhodocyclales rocD GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.6.1.11,2.6.1.13,2.6.1.17,3.5.3.1,3.5.3.11 ko:K00819,ko:K00821,ko:K01476,ko:K01480 ko00220,ko00300,ko00330,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,ko05146,map00220,map00300,map00330,map01100,map01110,map01120,map01130,map01210,map01230,map05146 M00016,M00028,M00029,M00133,M00134,M00845 R00551,R00667,R01157,R02283,R04475 RC00006,RC00024,RC00062,RC00329 ko00000,ko00001,ko00002,ko01000,ko01007 iYO844.BSU40340 Bacteria 1MV3C@1224,2KWDX@206389,2VHEB@28216,COG0010@1,COG0010@2,COG4992@1,COG4992@2 NA|NA|NA E COG0010 Arginase agmatinase formimionoglutamate hydrolase, arginase family HGDHCNMN_01278 305700.B447_10902 5.1e-215 753.8 Rhodocyclales ubiB GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 ko:K03688 ko00000 iYL1228.KPN_04331 Bacteria 1MU1Z@1224,2KVNA@206389,2VJ07@28216,COG0661@1,COG0661@2 NA|NA|NA H Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis HGDHCNMN_01280 748247.AZKH_0495 1.8e-272 944.9 Rhodocyclales argS GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 iAF987.Gmet_1434 Bacteria 1MU4J@1224,2KUXG@206389,2VHT1@28216,COG0018@1,COG0018@2 NA|NA|NA J Arginyl-tRNA synthetase HGDHCNMN_01281 748247.AZKH_0496 6.7e-30 137.9 Rhodocyclales ftsN ko:K03642 ko00000 Bacteria 1RI6A@1224,2KWVJ@206389,2VR10@28216,COG3087@1,COG3087@2 NA|NA|NA D cell division protein HGDHCNMN_01282 1123367.C666_09325 1.1e-15 89.4 Rhodocyclales dsbA ko:K03673 ko01503,map01503 M00728 ko00000,ko00001,ko00002,ko03110 Bacteria 1RGWH@1224,2KWSF@206389,2VSFV@28216,COG1651@1,COG1651@2 NA|NA|NA O Thiol disulfide interchange protein HGDHCNMN_01283 1123371.ATXH01000007_gene525 3e-23 114.4 Thermodesulfobacteria Bacteria 2GI8X@200940,COG4089@1,COG4089@2 NA|NA|NA S Protein of unknown function (DUF1614) HGDHCNMN_01284 1348657.M622_03685 2.1e-12 78.2 Rhodocyclales Z012_02020 Bacteria 1NHRC@1224,2KXB4@206389,2VW9Q@28216,COG4701@1,COG4701@2 NA|NA|NA S Protein of unknown function (DUF721) HGDHCNMN_01285 640081.Dsui_0230 2.5e-07 60.8 Rhodocyclales Bacteria 1NQCD@1224,2ENZW@1,2KXJX@206389,2VXYX@28216,33GKQ@2 NA|NA|NA HGDHCNMN_01286 748247.AZKH_3720 1e-146 526.2 Rhodocyclales lpxC GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108,4.2.1.59 ko:K02535,ko:K16363 ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212 M00060,M00083 R04428,R04535,R04537,R04544,R04568,R04587,R04954,R04965 RC00166,RC00300,RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 iECS88_1305.ECS88_0100 Bacteria 1MV6T@1224,2KU6A@206389,2VHI8@28216,COG0774@1,COG0774@2 NA|NA|NA M Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis HGDHCNMN_01287 748247.AZKH_3721 7e-169 600.1 Rhodocyclales ftsZ GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0051258,GO:0051301,GO:0065003,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Bacteria 1MV2X@1224,2KV6H@206389,2VH0S@28216,COG0206@1,COG0206@2 NA|NA|NA D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity HGDHCNMN_01288 62928.azo0888 1.4e-199 702.2 Rhodocyclales ftsA GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Bacteria 1MUSR@1224,2KVWG@206389,2VGZP@28216,COG0849@1,COG0849@2 NA|NA|NA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring HGDHCNMN_01289 748247.AZKH_3723 7.8e-83 313.9 Rhodocyclales ftsQ GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0032506,GO:0042802,GO:0043093,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 6.3.2.4 ko:K01921,ko:K03589 ko00473,ko00550,ko01100,ko01502,ko04112,map00473,map00550,map01100,map01502,map04112 R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011,ko03036 Bacteria 1N0T7@1224,2KW1D@206389,2VRMV@28216,COG1589@1,COG1589@2 NA|NA|NA D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly HGDHCNMN_01290 85643.Tmz1t_3425 3.2e-143 514.6 Rhodocyclales ddl GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008716,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 1.3.1.98,6.3.2.4 ko:K00075,ko:K01921 ko00473,ko00520,ko00550,ko01100,ko01502,map00473,map00520,map00550,map01100,map01502 R01150,R03191,R03192 RC00064,RC00141,RC02639 ko00000,ko00001,ko01000,ko01011 iECO26_1355.ECO26_0095 Bacteria 1MUTB@1224,2KU92@206389,2VHIW@28216,COG1181@1,COG1181@2 NA|NA|NA F Belongs to the D-alanine--D-alanine ligase family HGDHCNMN_01291 1304883.KI912532_gene1573 4e-77 294.3 Rhodocyclales murC GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 iECP_1309.ECP_0093,iJN678.murC Bacteria 1MV68@1224,2KVFZ@206389,2VIKZ@28216,COG0773@1,COG0773@2 NA|NA|NA M Belongs to the MurCDEF family HGDHCNMN_01293 876269.ARWA01000001_gene1314 3.1e-08 65.1 Beijerinckiaceae fsr GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0033554,GO:0042221,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071944 ko:K08223 ko00000,ko02000 2.A.1.35 Bacteria 1MXAA@1224,2TS5Z@28211,3N9XE@45404,COG2223@1,COG2223@2 NA|NA|NA P Major Facilitator Superfamily HGDHCNMN_01294 159087.Daro_3640 7.9e-21 105.5 Rhodocyclales purC GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 ko:K01923,ko:K01945,ko:K03566 ko00230,ko01100,ko01110,ko01130,ko02026,map00230,map01100,map01110,map01130,map02026 M00048 R04144,R04591 RC00064,RC00090,RC00162,RC00166 ko00000,ko00001,ko00002,ko01000,ko03000 Bacteria 1MUR9@1224,2KUQQ@206389,2VGZK@28216,COG0152@1,COG0152@2 NA|NA|NA F Belongs to the SAICAR synthetase family HGDHCNMN_01297 296591.Bpro_1315 1.9e-92 347.4 Bacteria ko:K06919 ko00000 Bacteria COG3378@1,COG3378@2 NA|NA|NA KL Phage plasmid primase P4 family HGDHCNMN_01298 497321.C664_02235 6.9e-21 106.7 Betaproteobacteria Bacteria 1Q0R8@1224,2DR34@1,2W5M8@28216,339YW@2 NA|NA|NA S Helix-turn-helix domain HGDHCNMN_01299 1333856.L686_03880 1.6e-12 78.6 Pseudomonas stutzeri group ko:K07733 ko00000,ko03000 Bacteria 1N8T4@1224,1TA2J@1236,1Z461@136846,COG3311@1,COG3311@2 NA|NA|NA K Prophage CP4-57 regulatory protein (AlpA) HGDHCNMN_01301 420662.Mpe_A1623 1.7e-132 479.6 unclassified Burkholderiales Z012_11675 Bacteria 1KPI6@119065,1MU23@1224,2VIPG@28216,COG0582@1,COG0582@2 NA|NA|NA L Pfam:DUF4102 HGDHCNMN_01302 748247.AZKH_1848 4.1e-284 983.4 Rhodocyclales guaA GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 iJN746.PP_1032,iLJ478.TM1820,iSF_1195.SF2553,iSFxv_1172.SFxv_2808,iS_1188.S2725,iYL1228.KPN_02833 Bacteria 1MU2A@1224,2KVB1@206389,2VHNG@28216,COG0518@1,COG0518@2,COG0519@1,COG0519@2 NA|NA|NA F Catalyzes the synthesis of GMP from XMP HGDHCNMN_01303 640513.Entas_3565 8.6e-70 270.0 Enterobacter ubiX GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0044237,GO:0044249,GO:0051186,GO:0051188 2.5.1.129 ko:K03186 ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220 M00117 R01238,R02952,R03367,R04985,R04986,R11225 RC00391,RC00814,RC03392 ko00000,ko00001,ko00002,ko01000 Bacteria 1RA0P@1224,1RPN1@1236,3X361@547,COG0163@1,COG0163@2 NA|NA|NA H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN HGDHCNMN_01304 580332.Slit_1230 5.9e-37 161.4 Bacteria pilE ko:K02650 ko02020,map02020 ko00000,ko00001,ko02035,ko02044 3.A.15.2 Bacteria COG4969@1,COG4969@2 NA|NA|NA NU cell adhesion HGDHCNMN_01305 62928.azo2558 2.9e-208 731.9 Rhodocyclales ko:K02005,ko:K16922 ko00000,ko01002 Bacteria 1MW9I@1224,2KXTI@206389,2VIUH@28216,COG1566@1,COG1566@2,COG1994@1,COG1994@2 NA|NA|NA M Peptidase family M50 HGDHCNMN_01306 62928.azo2557 6.3e-122 444.5 Rhodocyclales ko:K01993 ko00000 Bacteria 1N97Q@1224,2KYRT@206389,2VIES@28216,COG0845@1,COG0845@2 NA|NA|NA M Biotin-lipoyl like HGDHCNMN_01307 1123518.ARWI01000001_gene1601 3.7e-156 561.2 Thiotrichales Bacteria 1MU7T@1224,1T58P@1236,4614A@72273,COG0823@1,COG0823@2,COG2931@1,COG2931@2,COG2982@1,COG2982@2,COG3210@1,COG3210@2,COG3291@1,COG3291@2 NA|NA|NA MQU Domain of unknown function (DUF4347) HGDHCNMN_01308 760117.JN27_17195 8.4e-84 317.0 Oxalobacteraceae Bacteria 1R99C@1224,2VQDD@28216,4761X@75682,COG0845@1,COG0845@2 NA|NA|NA M Barrel-sandwich domain of CusB or HlyD membrane-fusion HGDHCNMN_01309 1357272.AVEO02000199_gene127 5.9e-146 524.6 Pseudomonas syringae group ko:K03287 ko00000 1.B.17 Bacteria 1MUHM@1224,1RNNS@1236,1Z9UZ@136849,COG1538@1,COG1538@2 NA|NA|NA MU Outer membrane efflux protein HGDHCNMN_01310 1000565.METUNv1_01826 9.2e-83 313.5 Rhodocyclales 2.7.13.3 ko:K02487,ko:K03407,ko:K03413,ko:K06596 ko02020,ko02025,ko02030,map02020,map02025,map02030 M00506,M00507 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 Bacteria 1QWFW@1224,2KVZ3@206389,2VPCN@28216,COG0784@1,COG0784@2 NA|NA|NA T cheY-homologous receiver domain HGDHCNMN_01311 62928.azo1673 0.0 1877.4 Rhodocyclales mfd GO:0000715,GO:0000716,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031326,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0043175,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051716,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1903506,GO:2000112,GO:2001141 ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Bacteria 1MUXG@1224,2KVGD@206389,2VI7M@28216,COG1197@1,COG1197@2 NA|NA|NA L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site HGDHCNMN_01312 748247.AZKH_2889 2.4e-80 305.4 Rhodocyclales Bacteria 1RDBS@1224,2KW9M@206389,2VQK6@28216,COG3332@1,COG3332@2 NA|NA|NA S Transport and Golgi organisation 2 HGDHCNMN_01313 76114.ebD92 7.4e-14 83.2 Rhodocyclales Bacteria 1NI6Z@1224,2EPNT@1,2KZ8W@206389,2VXVE@28216,33H9E@2 NA|NA|NA S Domain of unknown function (DUF4936) HGDHCNMN_01314 76114.ebA5412 7.7e-98 364.0 Rhodocyclales ygfZ ko:K06980,ko:K22073 ko00000,ko01000,ko03016,ko03029 Bacteria 1N852@1224,2KVRU@206389,2VK2D@28216,COG0354@1,COG0354@2 NA|NA|NA S Belongs to the GcvT family HGDHCNMN_01315 640081.Dsui_2656 3.2e-117 428.3 Rhodocyclales mltG GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901564 ko:K07082 ko00000 Bacteria 1MUQF@1224,2KU8Y@206389,2VHD4@28216,COG1559@1,COG1559@2 NA|NA|NA S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation HGDHCNMN_01316 748247.AZKH_2885 3e-81 308.1 Rhodocyclales tmk GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 ko:K00943 ko00240,ko01100,map00240,map01100 M00053 R02094,R02098 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV9C@1224,2KW0K@206389,2VQ24@28216,COG0125@1,COG0125@2 NA|NA|NA F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis HGDHCNMN_01317 85643.Tmz1t_2502 6.2e-111 407.5 Rhodocyclales holB GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MY1W@1224,2KUK8@206389,2VNED@28216,COG0470@1,COG0470@2 NA|NA|NA L DNA polymerase III HGDHCNMN_01318 85643.Tmz1t_2501 1.9e-46 191.8 Rhodocyclales pilZ ko:K02676 ko00000,ko02035,ko02044 Bacteria 1RGWZ@1224,2KWKJ@206389,2VT2B@28216,COG3215@1,COG3215@2 NA|NA|NA NU pilus assembly protein PilZ HGDHCNMN_01319 62928.azo1598 9.5e-109 399.8 Rhodocyclales ycfH GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 ko:K03424 ko00000,ko01000 Bacteria 1MUC0@1224,2KVC2@206389,2VHCT@28216,COG0084@1,COG0084@2 NA|NA|NA L Hydrolase, TatD family HGDHCNMN_01320 76114.ebA5423 3e-37 162.2 Rhodocyclales ko:K06867,ko:K21440 ko00000,ko04131 Bacteria 1N952@1224,2KWJN@206389,2VPIV@28216,COG0666@1,COG0666@2 NA|NA|NA S ankyrin repeat HGDHCNMN_01322 1000565.METUNv1_01245 3.8e-184 651.0 Rhodocyclales ko:K04763 ko00000,ko03036 Bacteria 1PZTE@1224,2KW77@206389,2VMKS@28216,COG4974@1,COG4974@2 NA|NA|NA L Belongs to the 'phage' integrase family HGDHCNMN_01323 1121935.AQXX01000055_gene2911 2.4e-06 60.1 Proteobacteria sbcC Bacteria 1R040@1224,COG0419@1,COG0419@2 NA|NA|NA L Plasmid replication region DNA-binding N-term HGDHCNMN_01324 497321.C664_09630 6.3e-172 610.9 Rhodocyclales asnB2 6.3.5.4 ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 R00578 RC00010 ko00000,ko00001,ko01000,ko01002 Bacteria 1PRFK@1224,2KV2F@206389,2VJKQ@28216,COG0367@1,COG0367@2 NA|NA|NA E Asparagine synthase HGDHCNMN_01325 305700.B447_00255 1.6e-155 555.4 Rhodocyclales argF GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 M00029,M00844 R01398 RC00096 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUFM@1224,2KV71@206389,2VIVG@28216,COG0078@1,COG0078@2 NA|NA|NA E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline HGDHCNMN_01326 1123367.C666_05400 1.1e-228 798.9 Rhodocyclales argG GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 iJN678.argG,iSB619.SA_RS04675 Bacteria 1MV0Y@1224,2KUUD@206389,2VJ7Z@28216,COG0137@1,COG0137@2 NA|NA|NA E Belongs to the argininosuccinate synthase family. Type 1 subfamily HGDHCNMN_01327 497321.C664_01685 9.7e-25 119.0 Rhodocyclales Bacteria 1N8DI@1224,2DNMC@1,2KX9U@206389,2VVNN@28216,32Y3R@2 NA|NA|NA S Protein of unknown function (DUF2788) HGDHCNMN_01328 640081.Dsui_3246 2.4e-50 204.5 Rhodocyclales ppnP 2.4.2.1,2.4.2.2 ko:K09913 ko00230,ko00240,map00230,map00240 R01561,R01570,R01863,R01876,R02147,R02296,R02297 RC00063,RC00122 ko00000,ko00001,ko01000 Bacteria 1MZ8N@1224,2KWJ5@206389,2VSCI@28216,COG3123@1,COG3123@2 NA|NA|NA S Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions HGDHCNMN_01329 748247.AZKH_3232 3.3e-67 261.2 Rhodocyclales yajQ GO:0000049,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0009987,GO:0017076,GO:0019001,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K09767 ko00000 Bacteria 1RDTF@1224,2KWAM@206389,2VPZU@28216,COG1666@1,COG1666@2 NA|NA|NA S Belongs to the UPF0234 family HGDHCNMN_01331 640081.Dsui_3243 3.3e-49 201.8 Rhodocyclales ko:K06985 ko04112,map04112 ko00000,ko00001 Bacteria 1N2PE@1224,2KWGP@206389,2VS6Z@28216,COG3577@1,COG3577@2 NA|NA|NA S gag-polyprotein putative aspartyl protease HGDHCNMN_01333 1454004.AW11_00873 3.7e-267 927.5 Betaproteobacteria cphA 6.3.2.2,6.3.2.29,6.3.2.30,6.3.2.4 ko:K01919,ko:K01921,ko:K03802 ko00270,ko00473,ko00480,ko00550,ko01100,ko01502,map00270,map00473,map00480,map00550,map01100,map01502 M00118 R00894,R01150,R10993 RC00064,RC00090,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011 Bacteria 1QWAW@1224,2VITI@28216,COG1181@1,COG1181@2 NA|NA|NA M cyanophycin synthetase HGDHCNMN_01336 748247.AZKH_3121 9e-89 333.2 Rhodocyclales ilvB GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 iSDY_1059.SDY_4155 Bacteria 1MU6U@1224,2KV5U@206389,2VMKP@28216,COG0028@1,COG0028@2 NA|NA|NA H Acetolactate synthase HGDHCNMN_01337 62928.azo1035 3.3e-34 151.0 Rhodocyclales ilvN GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 iAF1260.b3670,iAPECO1_1312.APECO1_2782,iB21_1397.B21_03496,iBWG_1329.BWG_3361,iE2348C_1286.E2348C_3985,iEC042_1314.EC042_4025,iECABU_c1320.ECABU_c41570,iECBD_1354.ECBD_0033,iECB_1328.ECB_03554,iECDH10B_1368.ECDH10B_3853,iECDH1ME8569_1439.ECDH1ME8569_3555,iECD_1391.ECD_03554,iECED1_1282.ECED1_4366,iECH74115_1262.ECH74115_5103,iECIAI1_1343.ECIAI1_3846,iECIAI39_1322.ECIAI39_4272,iECNA114_1301.ECNA114_3825,iECO111_1330.ECO111_4494,iECO26_1355.ECO26_4913,iECOK1_1307.ECOK1_4123,iECP_1309.ECP_3877,iECS88_1305.ECS88_4095,iECSE_1348.ECSE_3954,iECSF_1327.ECSF_3518,iECSP_1301.ECSP_4721,iECUMN_1333.ECUMN_4201,iECW_1372.ECW_m3968,iECs_1301.ECs4611,iEKO11_1354.EKO11_0033,iETEC_1333.ETEC_3964,iEcDH1_1363.EcDH1_0033,iEcE24377_1341.EcE24377A_4179,iEcHS_1320.EcHS_A3883,iEcSMS35_1347.EcSMS35_4037,iEcolC_1368.EcolC_0029,iG2583_1286.G2583_4464,iJO1366.b3670,iJR904.b3670,iLF82_1304.LF82_1110,iNRG857_1313.NRG857_18305,iPC815.YPO2294,iSFV_1184.SFV_3839,iSF_1195.SF3791,iSFxv_1172.SFxv_4123,iSSON_1240.SSON_3624,iS_1188.S3977,iUMN146_1321.UM146_18560,iUMNK88_1353.UMNK88_4479,iUTI89_1310.UTI89_C4226,iWFL_1372.ECW_m3968,iY75_1357.Y75_RS18770,iYL1228.KPN_04073,iZ_1308.Z5164,ic_1306.c4595 Bacteria 1N065@1224,2KWWN@206389,2VV2S@28216,COG0440@1,COG0440@2 NA|NA|NA E Acetolactate synthase small HGDHCNMN_01338 62928.azo1036 3.4e-187 661.0 Rhodocyclales aroC GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R01714 RC00586 ko00000,ko00001,ko00002,ko01000 iE2348C_1286.E2348C_2469,iEC55989_1330.EC55989_2573,iECO103_1326.ECO103_2794,iECO111_1330.ECO111_3077,iECO26_1355.ECO26_3317,iECSE_1348.ECSE_2638,iECW_1372.ECW_m2518,iEKO11_1354.EKO11_1436,iIT341.HP0663,iSSON_1240.SSON_2387,iUMNK88_1353.UMNK88_2882,iWFL_1372.ECW_m2518 Bacteria 1MU98@1224,2KUQ4@206389,2VJA4@28216,COG0082@1,COG0082@2 NA|NA|NA E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system HGDHCNMN_01339 565045.NOR51B_477 5.7e-20 103.2 unclassified Gammaproteobacteria ydcH ko:K09794 ko00000 Bacteria 1JBHY@118884,1PJVG@1224,1TB3F@1236,COG2841@1,COG2841@2 NA|NA|NA S Protein of unknown function (DUF465) HGDHCNMN_01340 243265.plu3392 1.1e-19 105.5 Gammaproteobacteria Bacteria 1MZ4X@1224,1S8R3@1236,COG0741@1,COG0741@2,COG5283@1,COG5283@2 NA|NA|NA M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) HGDHCNMN_01341 640510.BC1001_1747 1e-77 297.7 Betaproteobacteria Bacteria 1NWAY@1224,2F5MT@1,2W2TI@28216,33Y6V@2 NA|NA|NA HGDHCNMN_01342 556268.OFAG_00807 7.3e-32 144.4 Bacteria Bacteria 2936R@1,2ZQPT@2 NA|NA|NA HGDHCNMN_01343 640510.BC1001_1746 3.2e-07 62.4 Proteobacteria Bacteria 1P8JS@1224,2949P@1,2ZRPV@2 NA|NA|NA HGDHCNMN_01346 1123487.KB892846_gene659 1.3e-274 952.2 Rhodocyclales rpoD ko:K03086 ko00000,ko03021 Bacteria 1MVNJ@1224,2KVA2@206389,2VH74@28216,COG0568@1,COG0568@2 NA|NA|NA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth HGDHCNMN_01347 497321.C664_12765 2.8e-132 478.8 Rhodocyclales dnaG GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1MUHC@1224,2KUN3@206389,2VHI9@28216,COG0358@1,COG0358@2 NA|NA|NA L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication HGDHCNMN_01348 1123367.C666_04850 3.5e-48 197.6 Rhodocyclales dnaG GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1MUHC@1224,2KUN3@206389,2VHI9@28216,COG0358@1,COG0358@2 NA|NA|NA L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication HGDHCNMN_01349 640081.Dsui_1211 3.5e-47 194.5 Rhodocyclales yqeY ko:K09117 ko00000 Bacteria 1RGZS@1224,2KWI1@206389,2VR35@28216,COG1610@1,COG1610@2 NA|NA|NA S Yqey-like protein HGDHCNMN_01350 1000565.METUNv1_02135 8.5e-28 129.0 Rhodocyclales rpsU GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02970 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZCC@1224,2KWW7@206389,2VTZ4@28216,COG0828@1,COG0828@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bS21 family HGDHCNMN_01351 85643.Tmz1t_1192 9.1e-139 500.0 Rhodocyclales tsaD GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 ko:K01409,ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 R10648 RC00070,RC00416 ko00000,ko00001,ko00002,ko01000,ko02044,ko03016 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 Bacteria 1MU6S@1224,2KUA8@206389,2VHDR@28216,COG0533@1,COG0533@2 NA|NA|NA J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction HGDHCNMN_01352 1121127.JAFA01000001_gene1033 1.3e-57 229.6 Burkholderiaceae plsY GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.3.1.15,2.7.9.2,3.5.1.104 ko:K01007,ko:K03977,ko:K08591,ko:K22278 ko00561,ko00564,ko00620,ko00680,ko00720,ko01100,ko01110,ko01120,ko01200,map00561,map00564,map00620,map00680,map00720,map01100,map01110,map01120,map01200 M00089,M00173,M00374 R00199,R00851,R09380 RC00002,RC00004,RC00015,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004,ko03009 Bacteria 1K08V@119060,1RD4Z@1224,2VQ10@28216,COG0344@1,COG0344@2 NA|NA|NA I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP HGDHCNMN_01353 1123367.C666_04830 1.1e-47 196.1 Rhodocyclales folB 1.13.11.81,3.1.3.18,4.1.2.25,5.1.99.8 ko:K01091,ko:K01633 ko00630,ko00790,ko01100,ko01110,ko01130,map00630,map00790,map01100,map01110,map01130 M00126,M00840 R01334,R03504,R11037,R11073 RC00017,RC00721,RC00943,RC01479,RC03333,RC03334 ko00000,ko00001,ko00002,ko01000 Bacteria 1MZ8Z@1224,2KWJI@206389,2VUVV@28216,COG1539@1,COG1539@2 NA|NA|NA H dihydroneopterin aldolase HGDHCNMN_01354 748247.AZKH_1266 1.8e-28 132.1 Bacteria korB ko:K03746 ko00000,ko03036,ko03400 Bacteria COG2916@1,COG2916@2 NA|NA|NA S protein dimerization activity HGDHCNMN_01355 497321.C664_12735 1.8e-68 265.4 Rhodocyclales ybaK GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0043906,GO:0043907,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 ko:K03976 ko00000,ko01000,ko03016 Bacteria 1RGX5@1224,2KW2N@206389,2VQAY@28216,COG2606@1,COG2606@2 NA|NA|NA S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily HGDHCNMN_01356 305700.B447_07502 6.8e-43 180.3 Rhodocyclales ogt 2.1.1.63 ko:K00567 ko00000,ko01000,ko03400 Bacteria 1N2YQ@1224,2KWK1@206389,2VU5R@28216,COG0350@1,COG0350@2 NA|NA|NA L COG0350 Methylated DNA-protein cysteine methyltransferase HGDHCNMN_01357 748247.AZKH_1270 8.1e-52 210.3 Rhodocyclales tolA ko:K03832 ko00000,ko02000 2.C.1.1 Bacteria 1MZQW@1224,2KWXI@206389,2VU0N@28216,COG0810@1,COG0810@2 NA|NA|NA M Chalcone isomerase-like HGDHCNMN_01358 85643.Tmz1t_1199 8.1e-190 669.8 Rhodocyclales proA GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 M00015 R03313 RC00684 ko00000,ko00001,ko00002,ko01000 iLJ478.TM0293,iYO844.BSU13130 Bacteria 1MUGJ@1224,2KUNP@206389,2VJ5M@28216,COG0014@1,COG0014@2 NA|NA|NA E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate HGDHCNMN_01359 748247.AZKH_1272 1.7e-142 512.3 Rhodocyclales holA GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MWYT@1224,2KUG3@206389,2VIKX@28216,COG1466@1,COG1466@2 NA|NA|NA L DNA polymerase III delta subunit HGDHCNMN_01360 76114.ebA4385 3.3e-39 168.3 Rhodocyclales lptE GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 ko:K03643 ko00000,ko02000 1.B.42.1 iECH74115_1262.ECH74115_0730,iECSP_1301.ECSP_0694,iECs_1301.ECs0679,iG2583_1286.G2583_0804,iZ_1308.Z0788 Bacteria 1N13K@1224,2KWYS@206389,2VU54@28216,COG2980@1,COG2980@2 NA|NA|NA M Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane HGDHCNMN_01362 1000565.METUNv1_02147 0.0 1476.8 Rhodocyclales leuS GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 iECOK1_1307.ECOK1_0652,iECS88_1305.ECS88_0684,iNRG857_1313.NRG857_02925,iPC815.YPO2610 Bacteria 1MV47@1224,2KV8K@206389,2VH2J@28216,COG0495@1,COG0495@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family HGDHCNMN_01363 1123367.C666_07180 6.6e-113 413.7 Rhodocyclales mlaF GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0008144,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K02065 ko02010,map02010 M00210,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1MUSD@1224,2KUXY@206389,2VJIA@28216,COG1127@1,COG1127@2 NA|NA|NA Q ABC-type transport system involved in resistance to organic solvents, ATPase component HGDHCNMN_01364 62928.azo0807 1.7e-110 405.6 Rhodocyclales mlaE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02066 ko02010,map02010 M00210,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1MVPN@1224,2KUIX@206389,2VI5T@28216,COG0767@1,COG0767@2 NA|NA|NA Q COG0767 ABC-type transport system involved in resistance to organic solvents, permease component HGDHCNMN_01365 522306.CAP2UW1_0619 3.8e-52 211.1 unclassified Betaproteobacteria mlaD GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008289,GO:0016020,GO:0016021,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043167,GO:0043168,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K02067 ko02010,map02010 M00210,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1KQR5@119066,1NCUG@1224,2VRKR@28216,COG1463@1,COG1463@2 NA|NA|NA Q MlaD protein HGDHCNMN_01366 640081.Dsui_1401 2.3e-72 278.9 Rhodocyclales vacJ GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008150,GO:0009987,GO:0010876,GO:0015711,GO:0015748,GO:0015914,GO:0016043,GO:0033036,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071840,GO:0120009,GO:0120010 ko:K04754 ko00000 Bacteria 1MVX0@1224,2KW45@206389,2VQ97@28216,COG2853@1,COG2853@2 NA|NA|NA M VacJ family lipoprotein HGDHCNMN_01367 522306.CAP2UW1_0617 6.6e-68 263.8 unclassified Betaproteobacteria mlaC GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008150,GO:0009987,GO:0010876,GO:0015711,GO:0015748,GO:0015914,GO:0016043,GO:0030288,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0044464,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071840,GO:0120009,GO:0120010 ko:K07323 ko02010,map02010 M00210 ko00000,ko00001,ko00002,ko02000 3.A.1.27.3 Bacteria 1KQ2C@119066,1NKFA@1224,2VR85@28216,COG2854@1,COG2854@2 NA|NA|NA Q MlaC protein HGDHCNMN_01368 62928.azo0811 1.4e-14 85.5 Rhodocyclales ko:K07122 ko02010,map02010 M00210 ko00000,ko00001,ko00002,ko02000 3.A.1.27.3 Bacteria 1PJKD@1224,2KXIR@206389,2VW6E@28216,COG3113@1,COG3113@2 NA|NA|NA S STAS domain HGDHCNMN_01369 85643.Tmz1t_0894 1.3e-117 429.5 Rhodocyclales yadG ko:K01990,ko:K09695 ko02010,map02010 M00252,M00254 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.102 Bacteria 1MUW7@1224,2KVD2@206389,2VI81@28216,COG1131@1,COG1131@2 NA|NA|NA V ABC-type multidrug transport system, ATPase component HGDHCNMN_01370 240016.ABIZ01000001_gene5531 4.7e-268 931.0 Verrucomicrobiae acnA 4.2.1.3 ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173,M00740 R01324,R01325,R01900 RC00497,RC00498,RC00618 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 2ITHS@203494,46SFS@74201,COG1048@1,COG1048@2 NA|NA|NA C Aconitase C-terminal domain HGDHCNMN_01371 314230.DSM3645_17710 6.2e-21 107.8 Planctomycetes 3.1.26.4,3.1.3.3,3.1.3.73 ko:K02226,ko:K22305,ko:K22316 ko00260,ko00680,ko00860,ko01100,ko01120,ko01130,ko03030,map00260,map00680,map00860,map01100,map01120,map01130,map03030 M00122 R00582,R04594,R11173 RC00017 ko00000,ko00001,ko00002,ko01000,ko03032 Bacteria 2IZXQ@203682,COG0406@1,COG0406@2 NA|NA|NA G phosphoglycerate mutase HGDHCNMN_01372 1396418.BATQ01000008_gene1453 7.2e-55 220.3 Verrucomicrobiae gmhB 2.7.7.71,3.1.3.82,3.1.3.83 ko:K03273,ko:K15669 ko00540,ko01100,map00540,map01100 M00064 R05647,R09771,R09772 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 2IW66@203494,46T3Q@74201,COG0241@1,COG0241@2 NA|NA|NA E Polynucleotide kinase 3 phosphatase HGDHCNMN_01374 1304883.KI912532_gene1552 3.6e-62 244.2 Rhodocyclales ahpF ko:K03387 ko00000,ko01000 Bacteria 1MUKD@1224,2KUP1@206389,2VJ01@28216,COG3634@1,COG3634@2 NA|NA|NA O Alkyl hydroperoxide reductase HGDHCNMN_01375 1304883.KI912532_gene891 2.8e-49 202.6 Rhodocyclales Bacteria 1N9PW@1224,2EFF1@1,2KXE8@206389,2VX4Q@28216,3397W@2 NA|NA|NA HGDHCNMN_01376 62928.azo1913 9.4e-207 726.1 Rhodocyclales IV02_08645 ko:K07137 ko00000 Bacteria 1MV6P@1224,2KV32@206389,2VHGJ@28216,COG2509@1,COG2509@2 NA|NA|NA S fad dependent oxidoreductase HGDHCNMN_01377 1268622.AVS7_02335 3.6e-109 401.4 Betaproteobacteria aadA4 2.7.7.47 ko:K00984 ko00000,ko01000,ko01504 Bacteria 1QVMI@1224,2VPQJ@28216,COG1708@1,COG1708@2 NA|NA|NA S Domain of unknown function (DUF4111) HGDHCNMN_01378 159087.Daro_3427 1.4e-117 429.5 Rhodocyclales int ko:K04763 ko00000,ko03036 Bacteria 1MVAN@1224,2KV2M@206389,2VHUC@28216,COG4974@1,COG4974@2 NA|NA|NA L Belongs to the 'phage' integrase family HGDHCNMN_01379 1123487.KB892838_gene3883 1e-263 915.6 Rhodocyclales prfC GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019538,GO:0022411,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032984,GO:0034641,GO:0034645,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02837 ko00000,ko03012 Bacteria 1MU7X@1224,2KU7K@206389,2VIV3@28216,COG4108@1,COG4108@2 NA|NA|NA J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP HGDHCNMN_01380 1304883.KI912532_gene272 6.7e-29 134.0 Bacteria Bacteria COG0454@1,COG0454@2 NA|NA|NA K -acetyltransferase HGDHCNMN_01381 391625.PPSIR1_13800 2.1e-37 162.9 Proteobacteria Bacteria 1NYAX@1224,2F607@1,33YIP@2 NA|NA|NA S Endonuclease/Exonuclease/phosphatase family HGDHCNMN_01382 159087.Daro_1702 5.4e-169 600.5 Rhodocyclales pqqE ko:K06139 ko00000 Bacteria 1MUQP@1224,2KU6M@206389,2VIK6@28216,COG0535@1,COG0535@2 NA|NA|NA H Belongs to the radical SAM superfamily. PqqE family HGDHCNMN_01383 159087.Daro_1701 1.2e-26 125.6 Rhodocyclales pqqD ko:K06138 ko00000 Bacteria 1N7JR@1224,2E4CK@1,2KX6Q@206389,2VVSC@28216,32Z81@2 NA|NA|NA S Coenzyme PQQ synthesis protein D (PqqD) HGDHCNMN_01384 159087.Daro_1700 2.1e-115 421.8 Rhodocyclales pqqC 1.3.3.11 ko:K06137 ko00000,ko01000 Bacteria 1MW7G@1224,2KUDW@206389,2VI0X@28216,COG5424@1,COG5424@2 NA|NA|NA H Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ HGDHCNMN_01385 159087.Daro_1699 4.9e-120 437.6 Rhodocyclales pqqB GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0018130,GO:0018189,GO:0018193,GO:0018212,GO:0019538,GO:0019752,GO:0034641,GO:0036211,GO:0042180,GO:0042181,GO:0042364,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072350,GO:0072351,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901661,GO:1901663 3.1.4.55 ko:K06136,ko:K06167 ko00440,map00440 R10205 RC00296 ko00000,ko00001,ko01000 Bacteria 1MWI5@1224,2KVU8@206389,2VJUF@28216,COG1235@1,COG1235@2 NA|NA|NA S May be involved in the transport of PQQ or its precursor to the periplasm HGDHCNMN_01386 159087.Daro_1698 2.4e-82 312.4 Rhodocyclales pip 3.4.11.5 ko:K01259 ko00330,map00330 R00135 ko00000,ko00001,ko01000,ko01002 Bacteria 1QU3E@1224,2KUG5@206389,2WGMS@28216,COG2267@1,COG2267@2 NA|NA|NA I Alpha/beta hydrolase family HGDHCNMN_01387 1304883.KI912532_gene1982 5.2e-171 607.4 Betaproteobacteria 2.5.1.16 ko:K00797 ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100 M00034,M00133 R01920,R02869,R08359 RC00021,RC00053 ko00000,ko00001,ko00002,ko01000 Bacteria 1R0QD@1224,2WHVA@28216,COG4262@1,COG4262@2 NA|NA|NA S Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine HGDHCNMN_01388 76114.ebA6153 1.1e-30 139.8 Rhodocyclales Bacteria 1MZ9B@1224,2KWJE@206389,2VV4Z@28216,COG0526@1,COG0526@2 NA|NA|NA CO COG0526 Thiol-disulfide isomerase and thioredoxins HGDHCNMN_01389 76114.ebA6152 1.1e-130 473.4 Rhodocyclales Bacteria 1MVUD@1224,2KUCR@206389,2VIYQ@28216,COG4409@1,COG4409@2 NA|NA|NA G exo-alpha-(2->6)-sialidase activity HGDHCNMN_01390 948106.AWZT01000093_gene531 4.7e-169 601.7 Burkholderiaceae ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1K7CN@119060,1R1WX@1224,2W972@28216,COG4206@1,COG4206@2 NA|NA|NA H TonB dependent receptor HGDHCNMN_01391 267608.RSp1367 5.7e-30 137.1 Burkholderiaceae ccoP ko:K00406 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002 3.D.4.3 Bacteria 1KA8G@119060,1MZBZ@1224,2VSPR@28216,COG3245@1,COG3245@2 NA|NA|NA C Cytochrome C oxidase, cbb3-type, subunit III HGDHCNMN_01394 715451.ambt_04570 3e-11 76.6 Alteromonadaceae Bacteria 1R57V@1224,1RP87@1236,2DMCF@1,32JPI@2,46A5C@72275 NA|NA|NA HGDHCNMN_01395 1128912.GMES_0152 3.9e-33 148.3 Alteromonadaceae Bacteria 1ND4S@1224,1S7MB@1236,46B9D@72275,COG3409@1,COG3409@2 NA|NA|NA M Putative peptidoglycan binding domain HGDHCNMN_01396 85643.Tmz1t_3118 6.9e-174 617.1 Rhodocyclales Bacteria 1MU6Y@1224,2KV7J@206389,2VH5A@28216,COG0277@1,COG0277@2 NA|NA|NA C glycolate oxidase subunit GlcD HGDHCNMN_01397 497321.C664_10777 1e-106 393.3 Rhodocyclales rssA GO:0003674,GO:0003824,GO:0016787 ko:K07001 ko00000 Bacteria 1MUM9@1224,2KUYP@206389,2VK14@28216,COG1752@1,COG1752@2 NA|NA|NA S esterase of the alpha-beta hydrolase superfamily HGDHCNMN_01398 748247.AZKH_3136 7.1e-221 773.1 Rhodocyclales rimO 2.8.4.4 ko:K14441 R10652 RC00003,RC03217 ko00000,ko01000,ko03009 Bacteria 1MU7N@1224,2KVP0@206389,2VI16@28216,COG0621@1,COG0621@2 NA|NA|NA J Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 HGDHCNMN_01399 1123367.C666_02955 3.7e-80 304.7 Rhodocyclales phaR Bacteria 1RHRC@1224,2KVGG@206389,2VJ2N@28216,COG5394@1,COG5394@2 NA|NA|NA S synthesis repressor, PhaR HGDHCNMN_01400 748247.AZKH_3138 5.3e-101 374.0 Rhodocyclales Bacteria 1MUEV@1224,2KVXS@206389,2VH8R@28216,COG1028@1,COG1028@2 NA|NA|NA IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) HGDHCNMN_01401 305700.B447_01326 3.7e-126 457.6 Rhodocyclales Bacteria 1MUEV@1224,2KVKX@206389,2VH8R@28216,COG1028@1,COG1028@2 NA|NA|NA IQ Belongs to the short-chain dehydrogenases reductases (SDR) family HGDHCNMN_01402 76114.ebA4728 2e-252 878.2 Rhodocyclales phaC ko:K03821 ko00650,map00650 R04254 RC00004 ko00000,ko00001,ko01000 Bacteria 1MU68@1224,2KUWX@206389,2VH50@28216,COG3243@1,COG3243@2 NA|NA|NA I Poly(R)-hydroxyalkanoic acid synthase, class I HGDHCNMN_01403 1485544.JQKP01000004_gene496 8.6e-81 307.0 Nitrosomonadales ko:K11021,ko:K16267 ko00000,ko02000,ko02042 2.A.5.4.11 Bacteria 1R40E@1224,2VN69@28216,44UZT@713636,COG0428@1,COG0428@2 NA|NA|NA P ZIP Zinc transporter HGDHCNMN_01404 1120999.JONM01000019_gene3425 2.4e-93 348.6 Neisseriales yfiH ko:K05810 ko00000,ko01000 Bacteria 1MW2H@1224,2KPKE@206351,2VKD4@28216,COG1496@1,COG1496@2 NA|NA|NA S Belongs to the multicopper oxidase YfiH RL5 family HGDHCNMN_01405 76114.ebA4725 8.5e-114 416.8 Rhodocyclales rluD GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.28,5.4.99.29 ko:K06177,ko:K06180 ko00000,ko01000,ko03009,ko03016 iE2348C_1286.E2348C_2868,iECED1_1282.ECED1_3035,iECSF_1327.ECSF_2432 Bacteria 1MUBN@1224,2KV8G@206389,2VIFF@28216,COG0564@1,COG0564@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil HGDHCNMN_01406 85643.Tmz1t_3128 2e-101 375.6 Rhodocyclales bamD GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 ko:K05807,ko:K08309 ko00000,ko01000,ko01011,ko02000 1.B.33.1 GH23 Bacteria 1MVS5@1224,2KUN1@206389,2VH6I@28216,COG4105@1,COG4105@2 NA|NA|NA M Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane HGDHCNMN_01407 522306.CAP2UW1_1956 6.9e-39 167.2 unclassified Betaproteobacteria Bacteria 1KR01@119066,1N09V@1224,2CDFS@1,2VUR5@28216,32RXQ@2 NA|NA|NA S Protein of unknown function (DUF2946) HGDHCNMN_01408 1144319.PMI16_00645 1e-193 682.9 Oxalobacteraceae cpsB GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.7.7.13,5.3.1.8 ko:K00971,ko:K16011 ko00051,ko00520,ko01100,ko01110,ko01130,ko02025,map00051,map00520,map01100,map01110,map01130,map02025 M00114,M00361,M00362 R00885,R01819 RC00002,RC00376 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV39@1224,2VI4S@28216,473TM@75682,COG0662@1,COG0662@2,COG0836@1,COG0836@2 NA|NA|NA M Belongs to the mannose-6-phosphate isomerase type 2 family HGDHCNMN_01409 62928.azo2822 1.6e-81 309.3 Rhodocyclales engB GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03978 ko00000,ko03036 Bacteria 1MY3Z@1224,2KVVZ@206389,2VIKF@28216,COG0218@1,COG0218@2 NA|NA|NA D Necessary for normal cell division and for the maintenance of normal septation HGDHCNMN_01410 62928.azo2823 1.3e-74 286.2 Rhodocyclales cyc Bacteria 1N2NB@1224,2KUPA@206389,2VQNZ@28216,COG2863@1,COG2863@2 NA|NA|NA C cytochrome HGDHCNMN_01411 497321.C664_14898 1.2e-224 786.2 Betaproteobacteria ccs1 ko:K07399 ko00000 Bacteria 1N6XE@1224,2VJK9@28216,COG1333@1,COG1333@2 NA|NA|NA O ResB protein required for cytochrome c biosynthesis HGDHCNMN_01412 85643.Tmz1t_1528 8e-173 613.2 Rhodocyclales ccsA GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008152,GO:0015886,GO:0016020,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0055114,GO:0071702,GO:0071705,GO:0071944,GO:1901678 Bacteria 1RG6M@1224,2KZCZ@206389,2VI4N@28216,COG0755@1,COG0755@2 NA|NA|NA O Cytochrome C assembly protein HGDHCNMN_01413 497321.C664_14888 5.5e-86 324.3 Rhodocyclales 2.7.1.165 ko:K11529 ko00030,ko00260,ko00561,ko00630,ko00680,ko01100,ko01120,ko01130,ko01200,map00030,map00260,map00561,map00630,map00680,map01100,map01120,map01130,map01200 M00346 R08572 RC00002,RC00428 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW0V@1224,2KVCD@206389,2VIX0@28216,COG2833@1,COG2833@2 NA|NA|NA S Protein of unknown function (DUF455) HGDHCNMN_01414 1304883.KI912532_gene1629 4.3e-15 88.2 Rhodocyclales phaP Bacteria 1R4SV@1224,2KW96@206389,2VQP2@28216,COG5490@1,COG5490@2 NA|NA|NA S Phasin protein HGDHCNMN_01415 1049564.TevJSym_an00040 1.1e-21 109.4 unclassified Gammaproteobacteria ko:K14987 ko02020,map02020 M00524 ko00000,ko00001,ko00002,ko02022 Bacteria 1J64K@118884,1N6WR@1224,1S0TV@1236,COG4566@1,COG4566@2 NA|NA|NA K helix_turn_helix, Lux Regulon HGDHCNMN_01417 62928.azo3739 3.6e-44 184.1 Rhodocyclales glnK ko:K04751,ko:K04752 ko02020,map02020 ko00000,ko00001 Bacteria 1RGWK@1224,2KWCQ@206389,2VSEZ@28216,COG0347@1,COG0347@2 NA|NA|NA K Belongs to the P(II) protein family HGDHCNMN_01418 398527.Bphyt_6988 7.7e-60 237.3 Burkholderiaceae alkD Bacteria 1K658@119060,1QR4Q@1224,2VTTV@28216,COG4912@1,COG4912@2 NA|NA|NA L DNA alkylation repair enzyme HGDHCNMN_01420 279714.FuraDRAFT_2756 3.2e-59 235.7 Neisseriales xdhC ko:K07402 ko00000 Bacteria 1R3RT@1224,2KSXH@206351,2VKME@28216,COG1975@1,COG1975@2 NA|NA|NA O XdhC and CoxI family HGDHCNMN_01421 1120999.JONM01000021_gene114 2.2e-166 592.0 Neisseriales guaD GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006144,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008892,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0016814,GO:0018756,GO:0019239,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0046098,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072521,GO:1901360,GO:1901564 3.5.4.3 ko:K01487 ko00230,ko01100,map00230,map01100 R01676 RC00204 ko00000,ko00001,ko01000 iEC55989_1330.EC55989_3170,iECED1_1282.ECED1_3343,iECIAI1_1343.ECIAI1_3003,iECSE_1348.ECSE_3147 Bacteria 1MUPT@1224,2KQ9C@206351,2VJN1@28216,COG0402@1,COG0402@2 NA|NA|NA F Guanine deaminase HGDHCNMN_01422 701176.VIBRN418_06631 8.3e-34 149.8 Vibrionales yhaH GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1MZJ4@1224,1SA1N@1236,1XY7E@135623,COG3152@1,COG3152@2 NA|NA|NA S membrane HGDHCNMN_01423 640081.Dsui_2231 2.9e-136 491.9 Rhodocyclales Bacteria 1MXZ3@1224,2KZWH@206389,2VH3E@28216,COG0477@1,COG0477@2 NA|NA|NA EGP Transmembrane secretion effector HGDHCNMN_01425 497321.C664_13739 4.2e-302 1043.5 Rhodocyclales Bacteria 1PK5W@1224,2KVTD@206389,2VJIN@28216,COG1032@1,COG1032@2 NA|NA|NA C Elongator protein 3, MiaB family, Radical SAM HGDHCNMN_01426 62928.azo2508 1e-18 99.4 Rhodocyclales Bacteria 1NHN6@1224,2EI92@1,2KXI8@206389,2VYC9@28216,33C0E@2 NA|NA|NA HGDHCNMN_01427 323848.Nmul_D2813 2.1e-42 179.1 Nitrosomonadales pin GO:0000150,GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140097,GO:1901360 Bacteria 1MXXT@1224,2VN0J@28216,373GJ@32003,COG1961@1,COG1961@2 NA|NA|NA L PFAM Resolvase, N-terminal HGDHCNMN_01429 62928.azo2315 5.1e-87 327.4 Rhodocyclales 3.1.3.48 ko:K01104 ko00000,ko01000 Bacteria 1REIM@1224,2KYRK@206389,2W8E9@28216,COG2365@1,COG2365@2 NA|NA|NA T Tyrosine phosphatase family HGDHCNMN_01430 580332.Slit_0610 1.5e-54 219.9 Nitrosomonadales M1-734 ko:K07272,ko:K13486,ko:K20543,ko:K21007 ko02020,ko02025,map02020,map02025 ko00000,ko00001,ko01000,ko01003,ko01005,ko02000 1.B.55.3 Bacteria 1RB30@1224,2WHYB@28216,44WN0@713636,COG1216@1,COG1216@2,COG5010@1,COG5010@2 NA|NA|NA U Glycosyltransferase like family 2 HGDHCNMN_01431 748247.AZKH_0603 3.2e-245 854.4 Rhodocyclales msbA ko:K02021,ko:K06147,ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 3.A.1.106,3.A.1.109,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.21 Bacteria 1MUBM@1224,2KUTR@206389,2VHAN@28216,COG1132@1,COG1132@2 NA|NA|NA V Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation HGDHCNMN_01432 1000565.METUNv1_01834 5e-121 441.0 Rhodocyclales Bacteria 1R961@1224,28JUE@1,2KYD6@206389,2VNJ0@28216,2Z9JG@2 NA|NA|NA HGDHCNMN_01433 426117.M446_5439 5.7e-22 111.7 Alphaproteobacteria Bacteria 1REI6@1224,2UICM@28211,COG1216@1,COG1216@2 NA|NA|NA S Glycosyl transferase, family 2 HGDHCNMN_01434 338966.Ppro_2760 2.8e-57 228.8 delta/epsilon subdivisions lbgA ko:K07270 ko00000 GT25 Bacteria 1PEP3@1224,42TE1@68525,COG3306@1,COG3306@2 NA|NA|NA M Glycosyltransferase family 25 (LPS biosynthesis protein) HGDHCNMN_01435 1000565.METUNv1_01833 1.3e-78 300.4 Bacteria ko:K02847 ko00540,ko01100,map00540,map01100 M00080 ko00000,ko00001,ko00002,ko01000,ko01005,ko02000 9.B.67.4,9.B.67.5 Bacteria COG3307@1,COG3307@2 NA|NA|NA M -O-antigen HGDHCNMN_01436 1123399.AQVE01000014_gene74 2e-41 176.0 Bacteria Bacteria 2ECBC@1,3369Q@2 NA|NA|NA HGDHCNMN_01437 1095769.CAHF01000003_gene1022 1.6e-73 282.7 Betaproteobacteria Bacteria 1MWR2@1224,2VQAV@28216,COG0726@1,COG0726@2 NA|NA|NA G polysaccharide deacetylase HGDHCNMN_01439 1304883.KI912532_gene1019 0.0 1226.5 Rhodocyclales pccA 6.4.1.3 ko:K01965 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 M00373,M00741 R01859 RC00097,RC00609 ko00000,ko00001,ko00002,ko01000 Bacteria 1P6RE@1224,2KVJZ@206389,2VH59@28216,COG4770@1,COG4770@2 NA|NA|NA I carboxylase HGDHCNMN_01440 1304883.KI912532_gene1018 3.3e-17 93.2 Rhodocyclales pccB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0031974,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0070013,GO:0071704,GO:0072329,GO:1901575 2.1.3.15,6.4.1.3 ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 M00373,M00741 R01859 RC00097,RC00609 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVAX@1224,2KU70@206389,2VIYF@28216,COG4799@1,COG4799@2 NA|NA|NA I Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) HGDHCNMN_01441 748247.AZKH_4269 1.5e-91 342.4 Rhodocyclales MA20_31040 Bacteria 1RDIM@1224,2KV0G@206389,2VJQ5@28216,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HGDHCNMN_01442 748247.AZKH_4268 0.0 1359.4 Rhodocyclales fadE ko:K06445 ko00071,ko01100,ko01212,map00071,map01100,map01212 M00087 R01175,R01279,R03777,R03857,R03990,R04751,R04754 RC00052,RC00076 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUDR@1224,2KV4W@206389,2VKIW@28216,COG1960@1,COG1960@2 NA|NA|NA I AcyL-CoA dehydrogenase HGDHCNMN_01443 85643.Tmz1t_0806 1.6e-190 672.2 Rhodocyclales fadA 2.3.1.16,2.3.1.9 ko:K00626,ko:K00632 ko00071,ko00072,ko00280,ko00281,ko00310,ko00362,ko00380,ko00592,ko00620,ko00630,ko00640,ko00642,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00281,map00310,map00362,map00380,map00592,map00620,map00630,map00640,map00642,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00087,M00088,M00095,M00113,M00373,M00374,M00375 R00238,R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095 RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MU5G@1224,2KUQ2@206389,2VMHS@28216,COG0183@1,COG0183@2 NA|NA|NA I Belongs to the thiolase family HGDHCNMN_01444 748247.AZKH_4266 8.1e-258 896.3 Rhodocyclales yfcX 1.1.1.157,1.1.1.35,4.2.1.17,5.1.2.3 ko:K00074,ko:K01782,ko:K07516 ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212 M00032,M00087 R01975,R01976,R03026,R03045,R03276,R04137,R04170,R04203,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04743,R04744,R04745,R04746,R04748,R04749,R05066,R05305,R05576,R06411,R06412,R06941,R06942,R07935,R07951,R08093,R08094 RC00029,RC00099,RC00117,RC00241,RC00525,RC00831,RC00834,RC00896,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU9P@1224,2KU6T@206389,2VH0Y@28216,COG1024@1,COG1024@2,COG1250@1,COG1250@2 NA|NA|NA I 3-hydroxyacyl-CoA dehydrogenase HGDHCNMN_01445 305700.B447_16894 1.7e-48 198.7 Rhodocyclales yciA ko:K10806 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 Bacteria 1MZAZ@1224,2KWTN@206389,2VR9M@28216,COG1607@1,COG1607@2 NA|NA|NA I Thioesterase superfamily HGDHCNMN_01446 62928.azo0467 5.4e-157 560.8 Rhodocyclales fadL ko:K06076 ko00000,ko02000 1.B.9 Bacteria 1MUU4@1224,2KV76@206389,2VHI3@28216,COG2067@1,COG2067@2 NA|NA|NA I Long-chain fatty acid transport protein HGDHCNMN_01447 1000565.METUNv1_02690 3.8e-53 214.9 Rhodocyclales MA20_31040 Bacteria 1RDIM@1224,2KV0G@206389,2VJQ5@28216,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HGDHCNMN_01449 987059.RBXJA2T_11987 4.4e-78 297.7 unclassified Burkholderiales Bacteria 1KPKI@119065,1N0YI@1224,2VHIS@28216,COG0745@1,COG0745@2 NA|NA|NA K Transcriptional regulatory protein, C terminal HGDHCNMN_01451 765910.MARPU_12775 5e-69 267.7 Chromatiales cybP Bacteria 1RIG7@1224,1S6CS@1236,1WWYD@135613,COG3658@1,COG3658@2 NA|NA|NA C Cytochrome HGDHCNMN_01452 640081.Dsui_3328 4.3e-56 224.2 Rhodocyclales cycA Bacteria 1PT42@1224,2KWK2@206389,2WADQ@28216,COG3909@1,COG3909@2 NA|NA|NA C (sprot CYCP_CHRVI). CYTOCHROME C IS THE MOST WIDELY OCCURRING BACTERIAL C-TYPE CYTOCHROME. CYTOCHROMES C ARE HIGH-SPIN PROTEINS AND THE HEME HAS NO SIXTH LIGAND. THEIR EXACT FUNCTION IS NOT KNOWN HGDHCNMN_01453 159087.Daro_4079 2.4e-64 251.9 Betaproteobacteria Bacteria 1QUPT@1224,2VTZ5@28216,COG1472@1,COG1472@2 NA|NA|NA G Protein of unknown function (DUF3365) HGDHCNMN_01454 279714.FuraDRAFT_0156 8.8e-40 170.2 Neisseriales yohD GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0032505,GO:0043093,GO:0044464,GO:0051301,GO:0071944 Bacteria 1R5SJ@1224,2KSYG@206351,2VSRU@28216,COG0586@1,COG0586@2 NA|NA|NA S SNARE associated Golgi protein HGDHCNMN_01455 301.JNHE01000006_gene1125 5e-21 106.7 Gammaproteobacteria Bacteria 1QTZU@1224,1T1JC@1236,2DNUJ@1,32Z85@2 NA|NA|NA S Protein of unknown function (DUF2789) HGDHCNMN_01456 1198452.Jab_1c05060 1.8e-138 499.2 Oxalobacteraceae Bacteria 1MW7F@1224,2VHR0@28216,472G5@75682,COG2206@1,COG2206@2 NA|NA|NA T HD-GYP domain-containing protein HGDHCNMN_01457 1304883.KI912532_gene1100 2.6e-120 438.3 Rhodocyclales uppP 3.6.1.27 ko:K06153 ko00550,map00550 R05627 RC00002 ko00000,ko00001,ko01000,ko01011 Bacteria 1MX02@1224,2KV15@206389,2VHSA@28216,COG1968@1,COG1968@2 NA|NA|NA V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin HGDHCNMN_01458 640081.Dsui_0448 8.1e-62 244.2 Betaproteobacteria Bacteria 1R9J5@1224,2VX88@28216,COG4188@1,COG4188@2 NA|NA|NA S Platelet-activating factor acetylhydrolase plasma intracellular isoform II HGDHCNMN_01459 497321.C664_17967 1.2e-71 276.2 Rhodocyclales yqiA GO:0003674,GO:0003824,GO:0016787,GO:0016788 ko:K07000 ko00000 Bacteria 1MVJF@1224,2KWCR@206389,2VRCD@28216,COG3150@1,COG3150@2 NA|NA|NA S Uncharacterised protein family (UPF0227) HGDHCNMN_01460 748247.AZKH_3824 4.3e-99 367.9 Rhodocyclales Bacteria 1REVA@1224,2KVP6@206389,2VMI7@28216,COG0500@1,COG2226@2 NA|NA|NA Q Methyltransferase HGDHCNMN_01461 85643.Tmz1t_3694 2.4e-206 724.9 Rhodocyclales phr 4.1.99.3 ko:K01669 ko00000,ko01000,ko03400 Bacteria 1MV9Y@1224,2KUA4@206389,2VITS@28216,COG0415@1,COG0415@2 NA|NA|NA L Belongs to the DNA photolyase family HGDHCNMN_01462 62928.azo3459 2.8e-78 298.1 Rhodocyclales yqgE GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K07735 ko00000,ko03000 Bacteria 1RCXM@1224,2KVN5@206389,2VJQA@28216,COG1678@1,COG1678@2 NA|NA|NA K Belongs to the UPF0301 (AlgH) family HGDHCNMN_01463 62928.azo3460 5.3e-45 187.2 Rhodocyclales yqgF GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 ko:K07447 ko00000,ko01000 Bacteria 1RDHZ@1224,2KWP7@206389,2VUH0@28216,COG0816@1,COG0816@2 NA|NA|NA J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA HGDHCNMN_01464 76114.ebA1757 1.6e-64 252.3 Rhodocyclales pyrR GO:0003674,GO:0003700,GO:0006139,GO:0006220,GO:0006221,GO:0006355,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0031323,GO:0031326,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0072527,GO:0072528,GO:0080090,GO:0090407,GO:0140110,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.4.2.9 ko:K02825 ko00240,ko01100,map00240,map01100 R00966 RC00063 ko00000,ko00001,ko01000,ko03000 Bacteria 1RI6U@1224,2KWGS@206389,2VSNM@28216,COG2065@1,COG2065@2 NA|NA|NA F Pyrimidine operon attenuation protein uracil phosphoribosyltransferase HGDHCNMN_01465 305700.B447_11392 2.5e-159 568.2 Rhodocyclales pyrB GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 ko:K00608,ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 iYO844.BSU15490 Bacteria 1MWAB@1224,2KUTM@206389,2VHG9@28216,COG0540@1,COG0540@2 NA|NA|NA F Belongs to the ATCase OTCase family HGDHCNMN_01466 1000565.METUNv1_03805 7.5e-130 471.1 Rhodocyclales Bacteria 1MYB8@1224,2KUFQ@206389,2VI6C@28216,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeat HGDHCNMN_01467 85643.Tmz1t_3625 1.3e-32 146.4 Rhodocyclales lolB GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0010876,GO:0016020,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0034613,GO:0042157,GO:0042277,GO:0043170,GO:0044238,GO:0044462,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0051668,GO:0070727,GO:0071704,GO:0071723,GO:0071944,GO:0072657,GO:1901564 ko:K02494 ko00000 Bacteria 1N02T@1224,2M04G@206389,2VUIR@28216,COG3017@1,COG3017@2 NA|NA|NA M Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein HGDHCNMN_01468 497321.C664_16113 5.3e-92 344.4 Rhodocyclales ispE GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006629,GO:0006720,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050515,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901576 2.1.1.182,2.7.1.148 ko:K00919,ko:K02528,ko:K16924 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096,M00582 R05634,R10716 RC00002,RC00003,RC01439,RC03257 ko00000,ko00001,ko00002,ko01000,ko02000,ko03009 3.A.1.29 iEC55989_1330.EC55989_1304,iLJ478.TM1383,iYO844.BSU00460 Bacteria 1MVU3@1224,2KUJ6@206389,2VHK3@28216,COG1947@1,COG1947@2 NA|NA|NA F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol HGDHCNMN_01470 497321.C664_16108 1.5e-151 542.3 Rhodocyclales prs GO:0000287,GO:0003674,GO:0003824,GO:0004749,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006015,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042301,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046391,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 iAF1260.b1207,iAPECO1_1312.APECO1_323,iB21_1397.B21_01192,iBWG_1329.BWG_1032,iE2348C_1286.E2348C_1330,iEC042_1314.EC042_1264,iEC55989_1330.EC55989_1303,iECABU_c1320.ECABU_c14780,iECBD_1354.ECBD_2414,iECB_1328.ECB_01182,iECDH10B_1368.ECDH10B_1260,iECDH1ME8569_1439.ECDH1ME8569_1146,iECD_1391.ECD_01182,iECED1_1282.ECED1_1355,iECH74115_1262.ECH74115_1688,iECIAI1_1343.ECIAI1_1228,iECIAI39_1322.ECIAI39_1543,iECNA114_1301.ECNA114_1372,iECO103_1326.ECO103_1309,iECO111_1330.ECO111_1536,iECO26_1355.ECO26_1720,iECOK1_1307.ECOK1_1360,iECP_1309.ECP_1255,iECS88_1305.ECS88_1275,iECSE_1348.ECSE_1257,iECSF_1327.ECSF_1183,iECSP_1301.ECSP_1597,iECUMN_1333.ECUMN_1504,iECW_1372.ECW_m1293,iECs_1301.ECs1712,iEKO11_1354.EKO11_2647,iETEC_1333.ETEC_1311,iEcDH1_1363.EcDH1_2440,iEcE24377_1341.EcE24377A_1355,iEcHS_1320.EcHS_A1312,iEcSMS35_1347.EcSMS35_1935,iEcolC_1368.EcolC_2419,iG2583_1286.G2583_1478,iJO1366.b1207,iJR904.b1207,iLF82_1304.LF82_1744,iLJ478.TM1628,iNRG857_1313.NRG857_06180,iSBO_1134.SBO_1860,iSDY_1059.SDY_1256,iSSON_1240.SSON_1971,iUMN146_1321.UM146_11025,iUMNK88_1353.UMNK88_1523,iUTI89_1310.UTI89_C1401,iWFL_1372.ECW_m1293,iY75_1357.Y75_RS06300,ic_1306.c1665 Bacteria 1MW21@1224,2KV1W@206389,2VHU0@28216,COG0462@1,COG0462@2 NA|NA|NA F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) HGDHCNMN_01471 748247.AZKH_0692 1.3e-65 256.1 Rhodocyclales ctc GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02897 ko03010,map03010 M00178 ko00000,ko00001,ko00002,ko03011 Bacteria 1RDH0@1224,2KV6M@206389,2VQNU@28216,COG1825@1,COG1825@2 NA|NA|NA J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance HGDHCNMN_01472 62928.azo0753 1.7e-92 345.5 Rhodocyclales pth GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 ko:K01056 ko00000,ko01000,ko03012 Bacteria 1MX1P@1224,2KVUE@206389,2VKKJ@28216,COG0193@1,COG0193@2 NA|NA|NA J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis HGDHCNMN_01473 305700.B447_11587 3.6e-150 538.5 Betaproteobacteria ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2VNJW@28216,COG0840@1,COG0840@2 NA|NA|NA NT histidine kinase HAMP region domain protein HGDHCNMN_01475 748247.AZKH_3878 0.0 1114.8 Rhodocyclales ilvD 4.2.1.9 ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R01209,R04441,R05070 RC00468,RC01714 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1259 Bacteria 1MUTQ@1224,2KURC@206389,2VH5Q@28216,COG0129@1,COG0129@2 NA|NA|NA H Belongs to the IlvD Edd family HGDHCNMN_01476 1381123.AYOD01000008_gene3161 3.1e-64 252.3 Phyllobacteriaceae Bacteria 1Q48P@1224,2VAR6@28211,43QNM@69277,COG2348@1,COG2348@2 NA|NA|NA V Acetyltransferase (GNAT) domain HGDHCNMN_01477 1123487.KB892868_gene1151 2.9e-42 178.3 Rhodocyclales Bacteria 1RH71@1224,2KWSS@206389,2VS9R@28216,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain HGDHCNMN_01478 159087.Daro_3989 7.1e-187 659.8 Rhodocyclales hyaA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009897,GO:0009986,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0048037,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944,GO:0098552,GO:0098567,GO:1902494 1.12.7.2,1.12.99.6 ko:K00534,ko:K06282 ko00633,ko01120,map00633,map01120 R00019,R08034 RC00250 ko00000,ko00001,ko01000 iAPECO1_1312.APECO1_76,iUTI89_1310.UTI89_C1040 Bacteria 1MWAC@1224,2KV18@206389,2VK03@28216,COG1740@1,COG1740@2 NA|NA|NA C NiFe/NiFeSe hydrogenase small subunit C-terminal HGDHCNMN_01479 318586.Pden_3098 0.0 1165.6 Paracoccus hyaB GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016151,GO:0016491,GO:0022900,GO:0030288,GO:0030313,GO:0031975,GO:0032991,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0044569,GO:0045333,GO:0046872,GO:0046914,GO:0055114,GO:0071944,GO:1902494 1.12.99.6 ko:K06281 ko00633,ko01120,map00633,map01120 R08034 RC00250 ko00000,ko00001,ko01000 iSbBS512_1146.SbBS512_E2342 Bacteria 1MWFJ@1224,2PWEI@265,2TSH1@28211,COG0374@1,COG0374@2 NA|NA|NA C Nickel-dependent hydrogenase HGDHCNMN_01480 318586.Pden_3100 2.5e-111 408.3 Paracoccus cybH GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0020037,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0071944,GO:0097159,GO:1901363,GO:1902494 ko:K03620 ko02020,map02020 ko00000,ko00001 Bacteria 1MU87@1224,2PVAT@265,2TSH2@28211,COG1969@1,COG1969@2 NA|NA|NA C Domain of unknown function (DUF4405) HGDHCNMN_01481 371731.Rsw2DRAFT_2142 8.7e-81 306.6 Rhodobacter hupD GO:0003674,GO:0003824,GO:0004175,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 ko:K03605 ko00000,ko01000,ko01002 Bacteria 1FAZA@1060,1RE1C@1224,2U2IN@28211,COG0680@1,COG0680@2 NA|NA|NA C Hydrogenase maturation protease HGDHCNMN_01482 272942.RCAP_rcc00771 1.8e-29 135.2 Rhodobacter hybG ko:K03605,ko:K03618,ko:K04653 ko00000,ko01000,ko01002 Bacteria 1FC03@1060,1N9Z3@1224,2UD4G@28211,COG0298@1,COG0298@2 NA|NA|NA O TIGRFAM hydrogenase assembly chaperone hypC hupF HGDHCNMN_01483 371731.Rsw2DRAFT_2144 4.2e-53 214.2 Alphaproteobacteria hoxO ko:K03619 ko00000 Bacteria 1RJ41@1224,2TX76@28211,COG0526@1,COG0526@2 NA|NA|NA CO Belongs to the HupG HyaE family HGDHCNMN_01484 318586.Pden_3104 7.8e-117 426.8 Paracoccus hyaF ko:K03618 ko00000 Bacteria 1MV2U@1224,2PWNK@265,2TV0P@28211,COG1773@1,COG1773@2 NA|NA|NA C HupH hydrogenase expression protein, C-terminal conserved region HGDHCNMN_01485 318586.Pden_3105 5.4e-115 420.6 Paracoccus rubA GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0008199,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114 ko:K03618 ko00000 Bacteria 1N813@1224,2PUAW@265,2U0HG@28211,COG1773@1,COG1773@2 NA|NA|NA C [NiFe]-hydrogenase assembly, chaperone, HybE HGDHCNMN_01486 338969.Rfer_1348 1.1e-20 107.5 Comamonadaceae Bacteria 1Q84V@1224,2VJAQ@28216,4AB2J@80864,COG0457@1,COG0457@2,COG4319@1,COG4319@2 NA|NA|NA NU PFAM TPR repeat-containing protein HGDHCNMN_01487 62928.azo0620 9.7e-31 139.8 Rhodocyclales ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1N7RX@1224,2KX95@206389,2VW7C@28216,COG0226@1,COG0226@2 NA|NA|NA P ABC-type phosphate transport system, periplasmic component HGDHCNMN_01488 62928.azo0621 9.3e-74 284.3 Rhodocyclales Bacteria 1Q1XX@1224,2KVVA@206389,2VRRG@28216,COG3203@1,COG3203@2 NA|NA|NA M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane HGDHCNMN_01489 748247.AZKH_3882 2.3e-225 788.9 Rhodocyclales Bacteria 1MU2C@1224,2KYI4@206389,2VMZD@28216,COG2202@1,COG2202@2,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase HGDHCNMN_01490 62928.azo0836 1.2e-295 1021.9 Rhodocyclales glnS GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.18 ko:K01886 ko00970,ko01100,map00970,map01100 M00359,M00360 R03652 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iECIAI39_1322.ECIAI39_0637 Bacteria 1MUC8@1224,2KVV7@206389,2VHZX@28216,COG0008@1,COG0008@2 NA|NA|NA J glutaminyl-tRNA HGDHCNMN_01491 1454004.AW11_01747 2.9e-117 429.5 Betaproteobacteria ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1MUC1@1224,2VH4X@28216,COG1629@1,COG4771@2 NA|NA|NA P TonB-dependent receptor HGDHCNMN_01492 1304883.KI912532_gene2726 2.7e-31 142.1 Rhodocyclales Bacteria 1N6WD@1224,2E3CB@1,2M031@206389,2VUUB@28216,32YBM@2 NA|NA|NA S Domain of unknown function (DUF4154) HGDHCNMN_01493 305700.B447_20236 8.3e-123 448.4 Rhodocyclales Bacteria 1NRP8@1224,2KVVC@206389,2VGZQ@28216,COG0642@1,COG0642@2,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_01494 1000565.METUNv1_03883 4.4e-148 531.9 Rhodocyclales Bacteria 1MU2C@1224,2KY8Z@206389,2VH3V@28216,COG5001@1,COG5001@2 NA|NA|NA T Putative diguanylate phosphodiesterase HGDHCNMN_01495 640081.Dsui_1886 8.5e-142 510.4 Rhodocyclales Bacteria 1P1A3@1224,2KUC5@206389,2VIT3@28216,COG3437@1,COG3437@2 NA|NA|NA T Metal dependent phosphohydrolases with conserved 'HD' motif. HGDHCNMN_01496 640081.Dsui_1887 1.8e-179 636.0 Rhodocyclales 2.7.13.3 ko:K02482 ko00000,ko01000,ko01001,ko02022 Bacteria 1RCM9@1224,2KUJN@206389,2VJGE@28216,COG2202@1,COG2202@2,COG4191@1,COG4191@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_01497 1349767.GJA_804 2e-56 226.1 Oxalobacteraceae Bacteria 1RASR@1224,2VR0D@28216,474B9@75682,COG1639@1,COG1639@2 NA|NA|NA T HDOD domain HGDHCNMN_01498 640081.Dsui_2395 3e-13 81.3 Rhodocyclales Bacteria 1PX5C@1224,2AG5D@1,2KZKS@206389,2WCNE@28216,316A4@2 NA|NA|NA HGDHCNMN_01499 640081.Dsui_1890 3.4e-81 309.3 Rhodocyclales 2.7.13.3 ko:K02482 ko00000,ko01000,ko01001,ko02022 Bacteria 1MU2C@1224,2KVQ2@206389,2VH3V@28216,COG3437@1,COG3437@2,COG5001@1,COG5001@2 NA|NA|NA T Response regulator receiver modulated diguanylate cyclase phosphodiesterase HGDHCNMN_01500 765911.Thivi_2529 9.5e-36 156.4 Gammaproteobacteria crcB GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 ko:K06199 ko00000,ko02000 1.A.43.1,1.A.43.2,1.A.43.3 Bacteria 1MZNH@1224,1S9GR@1236,COG0239@1,COG0239@2 NA|NA|NA D Important for reducing fluoride concentration in the cell, thus reducing its toxicity HGDHCNMN_01501 748247.AZKH_0650 0.0 2068.9 Rhodocyclales hrpA GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 ko:K03578 ko00000,ko01000 Bacteria 1MUEQ@1224,2KUB1@206389,2VI3R@28216,COG1643@1,COG1643@2 NA|NA|NA L Helicase associated domain (HA2) Add an annotation HGDHCNMN_01502 511062.GU3_14540 3e-255 888.3 Aeromonadales torS ko:K11443 ko02020,ko04112,map02020,map04112 M00511 ko00000,ko00001,ko00002,ko02022 Bacteria 1NRP8@1224,1RRSJ@1236,1Y5K1@135624,COG0642@1,COG0784@1,COG0784@2,COG2203@1,COG2203@2,COG2205@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_01503 1479235.KK366039_gene1508 2.2e-129 469.5 Oceanospirillales 2.7.7.65 ko:K21088 ko02026,map02026 ko00000,ko00001,ko01000 Bacteria 1MU2C@1224,1RR6B@1236,1XNZH@135619,COG5001@1,COG5001@2 NA|NA|NA T COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain HGDHCNMN_01504 305700.B447_07142 7.7e-283 979.5 Rhodocyclales fusA2 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044237,GO:0044464,GO:0071944 ko:K02355 ko00000,ko03012,ko03029 Bacteria 1MVVY@1224,2KVQ3@206389,2VKWB@28216,COG0480@1,COG0480@2 NA|NA|NA J COG0480 Translation elongation factors (GTPases) HGDHCNMN_01505 62928.azo2897 2.3e-155 555.8 Rhodocyclales sulP ko:K03321 ko00000,ko02000 2.A.53.3 Bacteria 1MWDF@1224,2KUTA@206389,2VHKJ@28216,COG0659@1,COG0659@2 NA|NA|NA U COG0659 Sulfate permease and related transporters (MFS superfamily) HGDHCNMN_01506 765910.MARPU_10645 2.1e-230 806.6 Chromatiales 2.7.13.3 ko:K11527,ko:K20974 ko02020,ko02025,map02020,map02025 M00820 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1R5EN@1224,1T1JE@1236,1X2SJ@135613,COG3829@1,COG3829@2,COG5002@1,COG5002@2 NA|NA|NA T Histidine kinase HGDHCNMN_01507 883126.HMPREF9710_02257 4.8e-147 527.7 Oxalobacteraceae Bacteria 1MVHG@1224,2VHCU@28216,478F6@75682,COG0477@1,COG2814@2 NA|NA|NA EGP Major Facilitator Superfamily HGDHCNMN_01508 76114.ebA7051 1e-135 490.0 Rhodocyclales MA20_36195 ko:K09919 ko00000 Bacteria 1MU35@1224,2KUC4@206389,2VH0Z@28216,COG3146@1,COG3146@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_01509 497321.C664_10193 3.6e-186 657.5 Rhodocyclales mnmA GO:0001510,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004808,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016782,GO:0016783,GO:0030488,GO:0032259,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.8.1.13 ko:K00566 ko04122,map04122 R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 Bacteria 1MUT1@1224,2KVQU@206389,2VJRR@28216,COG0482@1,COG0482@2 NA|NA|NA J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 HGDHCNMN_01510 1123367.C666_10320 4.9e-41 174.5 Rhodocyclales Bacteria 1N74F@1224,2CDCV@1,2KWQ8@206389,2VSMP@28216,308Y1@2 NA|NA|NA HGDHCNMN_01511 640081.Dsui_3338 7.8e-63 246.5 Rhodocyclales nudJ GO:0003674,GO:0003824,GO:0004787,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0017111 3.6.1.55 ko:K03574,ko:K12152 ko00000,ko01000,ko03400 iSbBS512_1146.SbBS512_E1312 Bacteria 1N03W@1224,2KWI7@206389,2VRC0@28216,COG1051@1,COG1051@2 NA|NA|NA F Belongs to the Nudix hydrolase family. NudJ subfamily HGDHCNMN_01512 748247.AZKH_1030 7.7e-158 563.1 Rhodocyclales ilvE 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MVB0@1224,2KUZJ@206389,2VHR7@28216,COG0115@1,COG0115@2 NA|NA|NA E Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family HGDHCNMN_01513 62928.azo2776 9.2e-24 115.5 Rhodocyclales MA20_32275 Bacteria 1N7QM@1224,2KX79@206389,2VVV6@28216,COG4391@1,COG4391@2 NA|NA|NA S Zinc-finger domain HGDHCNMN_01514 748247.AZKH_1028 4.5e-44 184.1 Rhodocyclales Bacteria 1QXIX@1224,2KZY7@206389,2WH4R@28216,COG3631@1,COG3631@2 NA|NA|NA S SnoaL-like domain HGDHCNMN_01515 1123487.KB892835_gene3511 4.5e-116 424.5 Rhodocyclales yheT GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0050526,GO:0052689,GO:0071704 ko:K07019 ko00000 Bacteria 1MWV1@1224,2KVC0@206389,2VHZ1@28216,COG0429@1,COG0429@2 NA|NA|NA S alpha/beta hydrolase fold HGDHCNMN_01516 748247.AZKH_1027 2.7e-223 781.2 Rhodocyclales algC GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 ko:K01835,ko:K01840,ko:K15778 ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00114,M00549 R00959,R01057,R01818,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUA5@1224,2KUJY@206389,2VJ29@28216,COG1109@1,COG1109@2 NA|NA|NA G Phosphoglucomutase HGDHCNMN_01517 640081.Dsui_3272 1.1e-81 309.7 Rhodocyclales leuE GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015190,GO:0015318,GO:0015658,GO:0015711,GO:0015803,GO:0015804,GO:0015807,GO:0015820,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0042968,GO:0042970,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903825,GO:1905039 ko:K11250 ko00000,ko02000 2.A.76.1.5 Bacteria 1RA1G@1224,2KUBE@206389,2VKHI@28216,COG1280@1,COG1280@2 NA|NA|NA E threonine efflux protein HGDHCNMN_01518 290315.Clim_2388 1.3e-35 156.8 Bacteria Bacteria 2E3TX@1,32YRB@2 NA|NA|NA HGDHCNMN_01519 312153.Pnuc_1664 6.6e-66 256.9 Burkholderiaceae speG GO:0000287,GO:0003674,GO:0003824,GO:0004145,GO:0005488,GO:0005515,GO:0006576,GO:0006595,GO:0006598,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009056,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0022607,GO:0034641,GO:0042402,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0046872,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901565,GO:1901575 2.3.1.57 ko:K00657 ko00330,ko01100,ko04216,map00330,map01100,map04216 M00135 R01154 RC00004,RC00096 ko00000,ko00001,ko00002,ko01000 iAF1260.b1584,iB21_1397.B21_01543,iBWG_1329.BWG_1398,iECBD_1354.ECBD_2062,iECB_1328.ECB_01553,iECDH10B_1368.ECDH10B_1717,iECDH1ME8569_1439.ECDH1ME8569_1527,iECD_1391.ECD_01553,iECH74115_1262.ECH74115_2293,iECIAI1_1343.ECIAI1_1634,iECO103_1326.ECO103_1723,iECO111_1330.ECO111_2051,iECSE_1348.ECSE_1705,iECSP_1301.ECSP_2148,iECW_1372.ECW_m1749,iECs_1301.ECs2290,iEKO11_1354.EKO11_2194,iETEC_1333.ETEC_1618,iEcDH1_1363.EcDH1_2059,iEcE24377_1341.EcE24377A_1791,iEcHS_1320.EcHS_A1657,iEcolC_1368.EcolC_2046,iG2583_1286.G2583_1978,iJO1366.b1584,iJR904.b1584,iWFL_1372.ECW_m1749,iY75_1357.Y75_RS08305,iZ_1308.Z2571 Bacteria 1K3JC@119060,1PDMH@1224,2VQTP@28216,COG1670@1,COG1670@2 NA|NA|NA J PFAM GCN5-related N-acetyltransferase HGDHCNMN_01520 765420.OSCT_2686 4.1e-51 208.4 Chloroflexia rbsA 3.6.3.17 ko:K02056 M00221 ko00000,ko00002,ko01000,ko02000 3.A.1.2 Bacteria 2G625@200795,374YV@32061,COG3845@1,COG3845@2 NA|NA|NA S PFAM ABC transporter related HGDHCNMN_01522 1286093.C266_15432 1.1e-32 146.0 Burkholderiaceae ko:K05710,ko:K14750,ko:K15752 ko00360,ko00621,ko00642,ko01100,ko01120,ko01220,map00360,map00621,map00642,map01100,map01120,map01220 M00544,M00545 R05414,R05440,R06782,R06783,R09512 RC00098,RC01370 br01602,ko00000,ko00001,ko00002 Bacteria 1KA6M@119060,1PED8@1224,2VUQA@28216,COG2146@1,COG2146@2 NA|NA|NA P Rieske [2Fe-2S] domain HGDHCNMN_01523 159087.Daro_1346 1.6e-96 359.8 Rhodocyclales ko:K06076 ko00000,ko02000 1.B.9 Bacteria 1MV7W@1224,2KW3I@206389,2VKWX@28216,COG2067@1,COG2067@2 NA|NA|NA I Outer membrane protein transport protein (OMPP1/FadL/TodX) HGDHCNMN_01524 1472716.KBK24_0116230 6.5e-89 334.0 Burkholderiaceae Bacteria 1K52X@119060,1MXNX@1224,2VK9A@28216,COG1028@1,COG1028@2 NA|NA|NA IQ Enoyl-(Acyl carrier protein) reductase HGDHCNMN_01525 95619.PM1_0219680 1.5e-44 186.0 Gammaproteobacteria C1-hpah Bacteria 1RGYM@1224,1RSQV@1236,COG1853@1,COG1853@2 NA|NA|NA K COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family HGDHCNMN_01526 1286093.C266_15467 1.3e-160 572.8 Burkholderiaceae Bacteria 1KG6K@119060,1QU81@1224,2WGPZ@28216,COG0644@1,COG0644@2 NA|NA|NA C oxidoreductase HGDHCNMN_01527 1286093.C266_15407 2.2e-39 168.7 Proteobacteria Bacteria 1RI4S@1224,2A94J@1,30Y8Q@2 NA|NA|NA S SnoaL-like domain HGDHCNMN_01528 1286093.C266_15412 6.4e-41 173.3 Burkholderiaceae Bacteria 1KE2J@119060,1N64B@1224,2EUA2@1,2W78I@28216,33MSG@2 NA|NA|NA HGDHCNMN_01529 1472716.KBK24_0116260 3.4e-182 644.4 Burkholderiaceae Bacteria 1K6ZN@119060,1NTEB@1224,2WDEM@28216,COG4638@1,COG4638@2 NA|NA|NA P Ring hydroxylating alpha subunit (catalytic domain) HGDHCNMN_01530 1472716.KBK24_0116255 1.4e-189 669.1 Burkholderiaceae 3.5.1.4 ko:K01426 ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120 R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025 ko00000,ko00001,ko01000 Bacteria 1K56A@119060,1N12N@1224,2WB4F@28216,COG2421@1,COG2421@2 NA|NA|NA C Acetamidase/Formamidase family HGDHCNMN_01531 1286093.C266_15427 5.7e-118 431.4 Burkholderiaceae Bacteria 1K0NE@119060,1RFQQ@1224,2VRXF@28216,COG4191@1,COG4191@2 NA|NA|NA T PFAM ATP-binding region, ATPase domain protein HGDHCNMN_01532 1286093.C266_15392 1.2e-61 243.0 Burkholderiaceae Bacteria 1K2DR@119060,1RBBQ@1224,2VRAR@28216,COG4566@1,COG4566@2 NA|NA|NA K Two component transcriptional regulator, LuxR family HGDHCNMN_01533 497321.C664_08878 5.6e-36 156.8 Rhodocyclales Bacteria 1N0SU@1224,2KX6G@206389,2VUHT@28216,COG2823@1,COG2823@2 NA|NA|NA S bacterial OsmY and nodulation domain HGDHCNMN_01534 1348657.M622_01490 7.2e-28 130.2 Rhodocyclales ko:K02282,ko:K07705 ko02020,map02020 M00492 ko00000,ko00001,ko00002,ko02022,ko02035,ko02044 Bacteria 1NDQC@1224,2KXHT@206389,2VVNY@28216,COG2197@1,COG2197@2 NA|NA|NA KT response regulator receiver HGDHCNMN_01535 1384056.N787_05055 3.6e-73 282.0 Xanthomonadales Bacteria 1MY37@1224,1S76J@1236,1X4BV@135614,COG1597@1,COG1597@2 NA|NA|NA I Diacylglycerol kinase catalytic domain HGDHCNMN_01536 1415779.JOMH01000001_gene2998 4e-65 255.0 Xanthomonadales cpdA Bacteria 1MW6B@1224,1S5S8@1236,1X5YR@135614,COG1409@1,COG1409@2 NA|NA|NA S Calcineurin-like phosphoesterase superfamily domain HGDHCNMN_01537 1071679.BG57_04955 2.9e-109 402.1 Burkholderiaceae Bacteria 1K4CQ@119060,1Q5DN@1224,2VZP9@28216,COG4320@1,COG4320@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2252) HGDHCNMN_01539 85643.Tmz1t_0474 5.8e-88 330.5 Rhodocyclales vsrD ko:K02282,ko:K07689 ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111 M00475 ko00000,ko00001,ko00002,ko02022,ko02035,ko02044 Bacteria 1MWGM@1224,2KWH6@206389,2VHQ0@28216,COG2197@1,COG2197@2 NA|NA|NA K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain HGDHCNMN_01540 1348657.M622_01485 6e-85 321.6 Rhodocyclales vsrA 2.7.13.1,2.7.13.3 ko:K05962,ko:K07675 ko02020,map02020 M00473 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MWPN@1224,2KWPD@206389,2VJR2@28216,COG4585@1,COG4585@2,COG5278@1,COG5278@2 NA|NA|NA T Histidine kinase HGDHCNMN_01541 1219031.BBJR01000074_gene934 3.7e-10 70.1 Comamonadaceae Bacteria 1NGAH@1224,2VVY1@28216,4AFNU@80864,COG5487@1,COG5487@2 NA|NA|NA S UPF0391 membrane protein HGDHCNMN_01543 267608.RSc0224 9.4e-196 689.5 Burkholderiaceae rtcB GO:0003674,GO:0003824,GO:0003909,GO:0005488,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008452,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0030145,GO:0033554,GO:0034641,GO:0042245,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:0140098,GO:1901360 6.5.1.3 ko:K14415 ko00000,ko01000,ko03016 Bacteria 1K52N@119060,1MUHA@1224,2VJ89@28216,COG1690@1,COG1690@2 NA|NA|NA S tRNA-splicing ligase RtcB HGDHCNMN_01544 305700.B447_10578 3.5e-135 488.0 Rhodocyclales adhA 1.1.1.1 ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 Bacteria 1MUTT@1224,2KWMC@206389,2VHZ4@28216,COG1064@1,COG1064@2 NA|NA|NA S alcohol dehydrogenase HGDHCNMN_01545 522306.CAP2UW1_4249 4.6e-154 551.2 unclassified Betaproteobacteria pdhD 1.16.1.1,1.8.1.4 ko:K00382,ko:K00520 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1KPSJ@119066,1MU2U@1224,2VI6G@28216,COG1249@1,COG1249@2 NA|NA|NA C Protein involved in oxidation-reduction process HGDHCNMN_01546 1173024.KI912149_gene5907 1.6e-30 140.2 Stigonemataceae rbn ko:K07058 ko00000 Bacteria 1G1HS@1117,1JGV5@1189,COG1295@1,COG1295@2 NA|NA|NA S Virulence factor BrkB HGDHCNMN_01547 1123393.KB891316_gene1580 1.2e-14 86.3 Hydrogenophilales ko:K21973 ko00000 Bacteria 1KTE2@119069,1QZDE@1224,2VWMS@28216,COG2200@1,COG2200@2 NA|NA|NA T Sensors of blue-light using FAD HGDHCNMN_01548 1123393.KB891316_gene1581 8.3e-81 307.0 Hydrogenophilales fixK Bacteria 1KSVU@119069,1MVGE@1224,2VH04@28216,COG0664@1,COG0664@2 NA|NA|NA T Crp-like helix-turn-helix domain HGDHCNMN_01549 743299.Acife_3162 2.8e-106 392.1 Gammaproteobacteria Bacteria 1MW31@1224,1RRA7@1236,COG4307@1,COG4307@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_01550 159087.Daro_0045 2.4e-192 678.7 Rhodocyclales ko:K02021,ko:K02471 ko02010,map02010 ko00000,ko00001,ko02000 3.A.1.106,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.203.11,3.A.1.203.4,3.A.1.21 Bacteria 1MW09@1224,2KVDI@206389,2VIMQ@28216,COG4178@1,COG4178@2 NA|NA|NA S transport system, permease and ATPase HGDHCNMN_01551 1123504.JQKD01000025_gene5851 2.5e-13 80.9 Comamonadaceae yjbJ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 Bacteria 1N6X4@1224,2VW2V@28216,4AFCQ@80864,COG3237@1,COG3237@2 NA|NA|NA S Belongs to the UPF0337 (CsbD) family HGDHCNMN_01552 596153.Alide_3444 9.7e-11 72.0 Comamonadaceae Bacteria 1NGAH@1224,2VVY1@28216,4AFNU@80864,COG5487@1,COG5487@2 NA|NA|NA S UPF0391 membrane protein HGDHCNMN_01553 1120999.JONM01000032_gene506 2.7e-120 439.5 Betaproteobacteria yhjG GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0032386,GO:0032879,GO:0032880,GO:0033157,GO:0044464,GO:0050789,GO:0051049,GO:0051223,GO:0060341,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:0090313,GO:1903533,GO:1903827,GO:1905475 ko:K07289,ko:K07290 ko00000 9.B.121 Bacteria 1MUAN@1224,2VJ6I@28216,COG2982@1,COG2982@2 NA|NA|NA M PFAM AsmA family protein HGDHCNMN_01554 85643.Tmz1t_0477 4.1e-16 90.9 Rhodocyclales Bacteria 1N0SU@1224,2KX6G@206389,2VUHT@28216,COG2823@1,COG2823@2 NA|NA|NA S bacterial OsmY and nodulation domain HGDHCNMN_01556 1100721.ALKO01000021_gene569 7e-57 227.3 Comamonadaceae yiaD ko:K02557 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02000,ko02035 1.A.30.1 Bacteria 1MYBP@1224,2VR0Y@28216,4ACMC@80864,COG2885@1,COG2885@2 NA|NA|NA M Belongs to the ompA family HGDHCNMN_01558 1123367.C666_13445 1.6e-30 139.0 Rhodocyclales ko:K02282,ko:K07705 ko02020,map02020 M00492 ko00000,ko00001,ko00002,ko02022,ko02035,ko02044 Bacteria 1NDQC@1224,2KXHT@206389,2VVNY@28216,COG2197@1,COG2197@2 NA|NA|NA KT response regulator receiver HGDHCNMN_01559 292415.Tbd_2233 3e-61 241.5 Hydrogenophilales bfr GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 ko:K03594 ko00860,map00860 R00078 RC02758 ko00000,ko00001,ko01000 Bacteria 1KT1R@119069,1RAQ8@1224,2VQHR@28216,COG2193@1,COG2193@2 NA|NA|NA P Rubrerythrin HGDHCNMN_01560 666685.R2APBS1_1576 1.4e-35 156.0 Xanthomonadales Bacteria 1NPUA@1224,1T8IZ@1236,1XATB@135614,29PWE@1,30AUS@2 NA|NA|NA HGDHCNMN_01561 264198.Reut_B4875 3e-291 1007.7 Burkholderiaceae mrcA 2.4.1.129,3.4.16.4 ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 1K04G@119060,1MU5A@1224,2VJKJ@28216,COG5009@1,COG5009@2 NA|NA|NA M penicillin-binding protein HGDHCNMN_01562 1178482.BJB45_09975 5.4e-20 104.8 Oceanospirillales orf ko:K06985 ko04112,map04112 ko00000,ko00001 Bacteria 1N2PE@1224,1S60F@1236,1XJZK@135619,COG3577@1,COG3577@2 NA|NA|NA S gag-polyprotein putative aspartyl protease HGDHCNMN_01563 1348657.M622_10450 1.3e-98 366.3 Rhodocyclales panE GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008677,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0036094,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 iYO844.BSU15110 Bacteria 1P0AW@1224,2KWGC@206389,2VKYM@28216,COG1893@1,COG1893@2 NA|NA|NA H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid HGDHCNMN_01564 85643.Tmz1t_1347 1.2e-134 486.1 Rhodocyclales Bacteria 1N663@1224,2KW23@206389,2VJ6D@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_01565 1123367.C666_16650 2.3e-46 191.4 Rhodocyclales uraH GO:0006139,GO:0006144,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009112,GO:0009987,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:1901360,GO:1901564 3.5.2.17 ko:K07127 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R06601 RC03393 ko00000,ko00001,ko00002,ko01000,ko02000 9.B.35.1.2,9.B.35.2 Bacteria 1RH84@1224,2KYT7@206389,2VUG8@28216,COG2351@1,COG2351@2 NA|NA|NA S Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily HGDHCNMN_01566 497321.C664_07873 7.4e-177 626.7 Rhodocyclales MA20_17625 Bacteria 1MWHB@1224,2KV1G@206389,2VIC0@28216,COG3748@1,COG3748@2 NA|NA|NA S Pfam:DUF989 HGDHCNMN_01567 1123367.C666_16660 1.2e-62 246.1 Rhodocyclales uraD 1.7.3.3,3.5.1.41,4.1.1.97 ko:K00365,ko:K01452,ko:K13485,ko:K16838 ko00230,ko00232,ko00520,ko01100,ko01120,map00230,map00232,map00520,map01100,map01120 M00546 R02106,R02333,R06604,R07981 RC00166,RC00300,RC01551,RC02107,RC02551 ko00000,ko00001,ko00002,ko01000 Bacteria 1RH9S@1224,2KWMA@206389,2WEDX@28216,COG3195@1,COG3195@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_01568 497321.C664_07863 8.3e-168 596.3 Rhodocyclales puuE 3.5.1.41,3.5.2.5 ko:K01452,ko:K16842 ko00230,ko00520,ko01100,ko01120,map00230,map00520,map01100,map01120 M00546 R02333,R02425 RC00166,RC00300,RC00680 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV3V@1224,2KXYZ@206389,2VJQR@28216,COG0726@1,COG0726@2 NA|NA|NA G urate catabolism protein HGDHCNMN_01569 85643.Tmz1t_1342 1.6e-175 622.1 Rhodocyclales alc 3.5.3.4 ko:K01477 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R02422 RC00379,RC00712 ko00000,ko00001,ko00002,ko01000 Bacteria 1MXJK@1224,2KUB5@206389,2VKRI@28216,COG4266@1,COG4266@2 NA|NA|NA F Belongs to the allantoicase family HGDHCNMN_01570 1348657.M622_18055 2.7e-65 255.0 Rhodocyclales allA 4.3.2.3 ko:K01483 ko00230,ko01100,map00230,map01100 R00776 RC00153,RC00379 ko00000,ko00001,ko01000 Bacteria 1RH5G@1224,2KWU3@206389,2VT31@28216,COG3194@1,COG3194@2 NA|NA|NA F Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source HGDHCNMN_01571 85643.Tmz1t_1307 6.6e-223 780.0 Betaproteobacteria ygfU ko:K02824,ko:K03458 ko00000,ko02000 2.A.40,2.A.40.1.1,2.A.40.1.2 Bacteria 1MUN9@1224,2VGZR@28216,COG2233@1,COG2233@2 NA|NA|NA F PFAM Xanthine uracil vitamin C permease HGDHCNMN_01572 62928.azo3511 8.9e-116 423.3 Rhodocyclales tsx Bacteria 1R7UE@1224,2KY17@206389,2VRM7@28216,COG3248@1,COG3248@2 NA|NA|NA M Nucleoside-binding outer membrane protein HGDHCNMN_01573 765911.Thivi_0413 2e-130 473.4 Chromatiales Bacteria 1NRP8@1224,1SKTW@1236,1WZVB@135613,COG0642@1,COG0784@1,COG0784@2,COG2202@1,COG2202@2,COG2203@1,COG2203@2,COG2205@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_01574 946483.Cenrod_0845 7.7e-81 307.0 Betaproteobacteria ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 1N0VS@1224,2VXE3@28216,COG0834@1,COG0834@2 NA|NA|NA ET Bacterial extracellular solute-binding proteins, family 3 HGDHCNMN_01576 225849.swp_4186 4e-37 161.8 Shewanellaceae Bacteria 1RBEN@1224,1S375@1236,28PJ2@1,2QE19@267890,2ZC8V@2 NA|NA|NA HGDHCNMN_01577 497321.C664_03475 2.4e-09 67.8 Rhodocyclales mnmC GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0004808,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363 2.1.1.61,2.1.1.72,2.4.2.29,4.2.1.151 ko:K00773,ko:K07319,ko:K11782,ko:K15461 ko00130,ko01110,map00130,map01110 R00601,R03789,R08702,R10209,R10666 RC00003,RC00053,RC00060,RC00063,RC01483,RC03232 ko00000,ko00001,ko01000,ko02048,ko03016 Bacteria 1MZW5@1224,2KUU4@206389,2VHGY@28216,COG0665@1,COG0665@2,COG4121@1,COG4121@2 NA|NA|NA J Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 HGDHCNMN_01578 1000565.METUNv1_02630 6.8e-17 94.7 Rhodocyclales pcp ko:K06077 ko00000 Bacteria 1RK6D@1224,2KWUY@206389,2VU04@28216,COG3133@1,COG3133@2 NA|NA|NA M Glycine zipper 2TM domain HGDHCNMN_01579 1000565.METUNv1_00044 9.1e-227 792.7 Rhodocyclales gltX GO:0003674,GO:0003824,GO:0004812,GO:0004818,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006424,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.17,6.1.1.24 ko:K01885,ko:K09698 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R03651,R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 iEC042_1314.EC042_2616,iIT341.HP0476 Bacteria 1MUCR@1224,2KVN3@206389,2VH5S@28216,COG0008@1,COG0008@2 NA|NA|NA J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) HGDHCNMN_01580 62928.azo1361 4.1e-48 197.2 Rhodocyclales glnB GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006808,GO:0008144,GO:0008150,GO:0009889,GO:0010565,GO:0017076,GO:0019216,GO:0019217,GO:0019222,GO:0030234,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042304,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0046890,GO:0050789,GO:0050790,GO:0050794,GO:0062012,GO:0065007,GO:0065009,GO:0080090,GO:0097159,GO:0097367,GO:0098772,GO:1901265,GO:1901363 ko:K04751,ko:K04752 ko02020,map02020 ko00000,ko00001 Bacteria 1RGWK@1224,2KWKR@206389,2VSEZ@28216,COG0347@1,COG0347@2 NA|NA|NA K Belongs to the P(II) protein family HGDHCNMN_01581 748247.AZKH_3197 1.8e-204 718.8 Rhodocyclales nadE GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 ko:K01916,ko:K01950 ko00760,ko01100,map00760,map01100 M00115 R00189,R00257 RC00010,RC00100 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU9U@1224,2KVHU@206389,2VJ8C@28216,COG0171@1,COG0171@2,COG0388@1,COG0388@2 NA|NA|NA H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source HGDHCNMN_01582 748247.AZKH_1559 1.7e-08 65.1 Rhodocyclales Bacteria 1RII6@1224,2CEX8@1,2KYT8@206389,2W2TE@28216,32AEQ@2 NA|NA|NA HGDHCNMN_01584 765913.ThidrDRAFT_4336 3.9e-86 324.7 Chromatiales MA20_35470 3.5.2.6 ko:K17838,ko:K22334,ko:K22351 ko01501,map01501 R06363 RC01499 ko00000,ko00001,ko01000,ko01504 Bacteria 1NWXE@1224,1RZ9U@1236,1WXWM@135613,COG2602@1,COG2602@2 NA|NA|NA M PFAM Penicillin binding protein transpeptidase domain HGDHCNMN_01586 497321.C664_08980 0.0 1151.7 Rhodocyclales fadD3 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 Bacteria 1MU4D@1224,2KV98@206389,2VI0U@28216,COG1022@1,COG1022@2 NA|NA|NA I AMP-dependent synthetase and ligase HGDHCNMN_01587 748247.AZKH_4033 1.1e-128 466.1 Rhodocyclales livG ko:K01995,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MUTY@1224,2KVIG@206389,2VJ0Q@28216,COG0411@1,COG0411@2 NA|NA|NA E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component HGDHCNMN_01588 62928.azo3445 1.7e-141 508.8 Rhodocyclales braD ko:K01997 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1N54M@1224,2KVZ8@206389,2VIID@28216,COG0559@1,COG0559@2 NA|NA|NA U Belongs to the binding-protein-dependent transport system permease family HGDHCNMN_01590 748247.AZKH_4031 9.6e-152 543.1 Rhodocyclales ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MV66@1224,2KV48@206389,2VHRM@28216,COG4177@1,COG4177@2 NA|NA|NA U Belongs to the binding-protein-dependent transport system permease family HGDHCNMN_01591 748247.AZKH_4030 6.2e-225 786.6 Rhodocyclales ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MV5T@1224,2KVMF@206389,2VI33@28216,COG0683@1,COG0683@2 NA|NA|NA E ABC-type branched-chain amino acid transport systems, periplasmic component HGDHCNMN_01592 159087.Daro_0254 4.8e-132 477.2 Rhodocyclales livF3 ko:K01996 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MVVC@1224,2KUVN@206389,2VHET@28216,COG0410@1,COG0410@2 NA|NA|NA E ABC-type branched-chain amino acid transport systems, ATPase component HGDHCNMN_01593 62928.azo3441 2.1e-190 671.8 Rhodocyclales paaK 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 R02539 RC00004,RC00014 ko00000,ko00001,ko01000 Bacteria 1MV1W@1224,2KUZ8@206389,2VHRJ@28216,COG1541@1,COG1541@2 NA|NA|NA H Coenzyme F390 synthetase HGDHCNMN_01594 748247.AZKH_4026 8.2e-96 357.1 Rhodocyclales ko:K07088 ko00000 Bacteria 1N1X9@1224,2KW61@206389,2VIM5@28216,COG0679@1,COG0679@2 NA|NA|NA S Membrane transport protein HGDHCNMN_01595 1348657.M622_07545 7.4e-36 156.8 Rhodocyclales Bacteria 1RKSZ@1224,2EDY7@1,2KWV4@206389,2VTSJ@28216,337T3@2 NA|NA|NA HGDHCNMN_01596 76114.ebA3794 3.8e-159 568.5 Rhodocyclales Bacteria 1MUY7@1224,2KUH6@206389,2VIXT@28216,COG0642@1,COG0784@1,COG0784@2,COG2205@2,COG5000@1,COG5000@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_01597 62928.azo3437 1.7e-51 209.9 Rhodocyclales ko:K01989 M00247 ko00000,ko00002,ko02000 Bacteria 1NACH@1224,2KWT6@206389,2VSU8@28216,COG2984@1,COG2984@2 NA|NA|NA S transport system, periplasmic component HGDHCNMN_01598 748247.AZKH_1238 1e-96 361.3 Betaproteobacteria ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1MUC1@1224,2VH4X@28216,COG1629@1,COG4771@2 NA|NA|NA P TonB-dependent receptor HGDHCNMN_01599 62928.azo3436 2.7e-64 251.9 Rhodocyclales agmR Bacteria 1P4TD@1224,2KW82@206389,2VMX4@28216,COG2197@1,COG2197@2 NA|NA|NA K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain HGDHCNMN_01600 522306.CAP2UW1_3321 6.8e-223 780.4 Betaproteobacteria ko:K04759 ko00000,ko02000 9.A.8.1 Bacteria 1MUZC@1224,2VIRG@28216,COG0370@1,COG0370@2 NA|NA|NA P Ferrous iron transport protein B HGDHCNMN_01601 1500894.JQNN01000001_gene1825 2.2e-97 362.8 Proteobacteria ko:K02453,ko:K02666 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1QUY7@1224,COG4796@1,COG4796@2 NA|NA|NA U type II and III secretion system protein HGDHCNMN_01605 1500894.JQNN01000001_gene1821 3.1e-60 239.2 Bacteria ko:K02662 ko00000,ko02035,ko02044 Bacteria COG4972@1,COG4972@2 NA|NA|NA NU Pilus assembly protein HGDHCNMN_01606 1440053.JOEI01000002_gene3408 2e-10 74.7 Actinobacteria Bacteria 2GMBB@201174,COG2755@1,COG2755@2,COG3209@1,COG3209@2 NA|NA|NA M COG3209 Rhs family protein HGDHCNMN_01610 1500894.JQNN01000001_gene1816 9.3e-28 130.2 Bacteria pulG ko:K02650,ko:K02655 ko02020,map02020 ko00000,ko00001,ko02035,ko02044 3.A.15.2 Bacteria COG4968@1,COG4968@2 NA|NA|NA NU Prokaryotic N-terminal methylation motif HGDHCNMN_01611 1500894.JQNN01000001_gene1815 1.5e-75 290.0 Oxalobacteraceae ko:K02653 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1MV4U@1224,2VHPE@28216,473ER@75682,COG1459@1,COG1459@2 NA|NA|NA NU type II secretion system protein HGDHCNMN_01612 1500894.JQNN01000001_gene1814 3.3e-214 751.5 Oxalobacteraceae ko:K02652 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1MU7V@1224,2VHQ1@28216,47316@75682,COG2804@1,COG2804@2 NA|NA|NA NU Type II secretion system (T2SS), protein E, N-terminal domain HGDHCNMN_01613 1500894.JQNN01000001_gene1813 5.4e-153 547.7 Oxalobacteraceae Bacteria 1RAQS@1224,2VQE0@28216,476UU@75682,COG2206@1,COG2206@2 NA|NA|NA T HD domain HGDHCNMN_01614 649831.L083_3398 1.2e-19 102.8 Micromonosporales Bacteria 2GK5S@201174,4D8U9@85008,COG0745@1,COG0745@2 NA|NA|NA T Transcriptional regulatory protein, C terminal HGDHCNMN_01615 1500894.JQNN01000001_gene1811 2.9e-92 346.3 Betaproteobacteria Bacteria 1MWF3@1224,2VIBV@28216,COG5002@1,COG5002@2 NA|NA|NA T Histidine kinase HGDHCNMN_01616 1304883.KI912532_gene2784 5.7e-17 92.8 Betaproteobacteria Bacteria 1NID4@1224,2DSEN@1,2VYCI@28216,33FUI@2 NA|NA|NA HGDHCNMN_01617 1163617.SCD_n02307 7.5e-80 304.7 Betaproteobacteria Bacteria 1N1Z2@1224,2WGRW@28216,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_01618 1163617.SCD_n02306 2e-65 255.8 Betaproteobacteria Bacteria 1MY5Y@1224,2VQRM@28216,COG0745@1,COG0745@2 NA|NA|NA K Transcriptional regulatory protein, C terminal HGDHCNMN_01619 583345.Mmol_2233 0.0 1280.4 Nitrosomonadales ko:K07787,ko:K15726 ko02020,map02020 ko00000,ko00001,ko02000 2.A.6.1.2,2.A.6.1.4 Bacteria 1NUIV@1224,2KM5P@206350,2VKKR@28216,COG3696@1,COG3696@2 NA|NA|NA P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family HGDHCNMN_01620 582744.Msip34_1185 4.8e-64 251.9 Nitrosomonadales ko:K15727 ko00000,ko02000 8.A.1.2.1 Bacteria 1MVAS@1224,2KKYQ@206350,2VI8Z@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family HGDHCNMN_01621 159087.Daro_1176 6e-52 211.8 Rhodocyclales ko:K15725 ko00000,ko02000 1.B.17.2.2 Bacteria 1R744@1224,2KYCU@206389,2VJW4@28216,COG1538@1,COG1538@2 NA|NA|NA MU Outer membrane efflux protein HGDHCNMN_01622 1116472.MGMO_171c00200 6e-37 161.0 Methylococcales Bacteria 1RHH8@1224,1S827@1236,1XF2N@135618,2AHZA@1,318CM@2 NA|NA|NA HGDHCNMN_01623 857087.Metme_1348 5.9e-57 227.3 Methylococcales spoIVA ko:K06398,ko:K06945 ko00000 Bacteria 1PYIA@1224,1S271@1236,1XEEV@135618,COG2229@1,COG2229@2 NA|NA|NA S small GTP-binding protein HGDHCNMN_01624 472759.Nhal_3342 5.5e-42 178.7 Chromatiales Bacteria 1N58C@1224,1SAPH@1236,1X12X@135613,2DBSQ@1,2ZATE@2 NA|NA|NA HGDHCNMN_01625 395495.Lcho_0654 2.6e-09 68.6 unclassified Burkholderiales 3.6.4.13,5.4.99.21 ko:K03578,ko:K06182 ko00000,ko01000,ko03009 Bacteria 1KNIE@119065,1N7U2@1224,2W1YR@28216,COG3170@1,COG3170@2 NA|NA|NA NU Tfp pilus assembly protein FimV HGDHCNMN_01626 159087.Daro_3136 6.5e-32 143.3 Rhodocyclales soxE Bacteria 1NGJ1@1224,2KX1J@206389,2VVR2@28216,COG2863@1,COG2863@2 NA|NA|NA C Cytochrome c, class I HGDHCNMN_01627 1304883.KI912532_gene1300 8.1e-182 643.3 Rhodocyclales soxF 1.8.2.1,1.8.5.4 ko:K05301,ko:K17218 ko00920,ko01100,ko01120,map00920,map01100,map01120 R00528,R10152 RC00168,RC03155 ko00000,ko00001,ko01000 Bacteria 1N5MC@1224,2KVMP@206389,2VK35@28216,COG0446@1,COG0446@2 NA|NA|NA S sulfide dehydrogenase HGDHCNMN_01628 159087.Daro_2892 2.8e-138 498.4 Bacteria Bacteria COG0607@1,COG0607@2 NA|NA|NA P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS HGDHCNMN_01629 1304883.KI912532_gene1302 1.7e-68 265.8 Rhodocyclales nosC2 Bacteria 1RC61@1224,2KW6I@206389,2VQSA@28216,COG2863@1,COG2863@2 NA|NA|NA C Cytochrome c, class I HGDHCNMN_01630 1123367.C666_12140 2.6e-68 265.0 Rhodocyclales Bacteria 1QU9M@1224,2KWMJ@206389,2WGK0@28216,COG0500@1,COG0500@2 NA|NA|NA Q tellurite resistance protein HGDHCNMN_01631 1123367.C666_12125 1.6e-66 259.2 Rhodocyclales tesA 3.1.1.5 ko:K10804 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 Bacteria 1RCXZ@1224,2KWAE@206389,2VRIQ@28216,COG2755@1,COG2755@2 NA|NA|NA E GDSL-like Lipase/Acylhydrolase family HGDHCNMN_01632 1121035.AUCH01000013_gene3076 5.2e-118 430.6 Rhodocyclales suhB GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0031403,GO:0031420,GO:0042578,GO:0043167,GO:0043169,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0046872,GO:0047954,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_2538,iPC815.YPO2899 Bacteria 1MUQT@1224,2KVHM@206389,2VIXG@28216,COG0483@1,COG0483@2 NA|NA|NA G COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family HGDHCNMN_01633 62928.azo2020 2e-69 268.9 Rhodocyclales trmJ GO:0001510,GO:0002128,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.200,3.5.1.19,6.1.1.16 ko:K01883,ko:K02533,ko:K08281,ko:K15396 ko00760,ko00970,ko01100,map00760,map00970,map01100 M00359,M00360 R01268,R03650 RC00055,RC00100,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1N47Y@1224,2KW30@206389,2VI2D@28216,COG0565@1,COG0565@2 NA|NA|NA J Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA HGDHCNMN_01634 748247.AZKH_2818 2.4e-96 358.6 Rhodocyclales cysE GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 iJN746.PP_0840 Bacteria 1MVFX@1224,2KVCE@206389,2VH8C@28216,COG1045@1,COG1045@2 NA|NA|NA E serine acetyltransferase HGDHCNMN_01635 62928.azo2018 1.4e-57 229.2 Rhodocyclales iscR 2.8.1.7 ko:K04487,ko:K13643 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03000,ko03016,ko03029 Bacteria 1RDA4@1224,2KWEM@206389,2VRGK@28216,COG1959@1,COG1959@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_01636 62928.azo2017 6e-144 517.3 Rhodocyclales 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Bacteria 1MU1C@1224,2KUEZ@206389,2VH91@28216,COG1104@1,COG1104@2 NA|NA|NA E Cysteine desulfurase HGDHCNMN_01637 497321.C664_00110 9.4e-204 716.1 Rhodocyclales iscS GO:0001522,GO:0003674,GO:0003824,GO:0004123,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009000,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016769,GO:0016782,GO:0016783,GO:0016829,GO:0016846,GO:0018130,GO:0018131,GO:0019842,GO:0022607,GO:0030170,GO:0031071,GO:0031119,GO:0031163,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046484,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097163,GO:0140104,GO:1901360,GO:1901363 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 iPC815.YPO2896,iYL1228.KPN_02862 Bacteria 1MU1C@1224,2KUBJ@206389,2VH91@28216,COG1104@1,COG1104@2 NA|NA|NA E Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins HGDHCNMN_01638 1000565.METUNv1_00563 5.6e-62 243.4 Rhodocyclales iscU GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0036455,GO:0042592,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0097428,GO:0098771,GO:1901564 ko:K04488 ko00000 iAPECO1_1312.APECO1_3996,iB21_1397.B21_02385,iBWG_1329.BWG_2293,iE2348C_1286.E2348C_2812,iEC042_1314.EC042_2733,iEC55989_1330.EC55989_2814,iECABU_c1320.ECABU_c28350,iECBD_1354.ECBD_1155,iECB_1328.ECB_02421,iECDH10B_1368.ECDH10B_2696,iECDH1ME8569_1439.ECDH1ME8569_2456,iECD_1391.ECD_02421,iECED1_1282.ECED1_2960,iECH74115_1262.ECH74115_3761,iECIAI1_1343.ECIAI1_2581,iECIAI39_1322.ECIAI39_2730,iECNA114_1301.ECNA114_2608,iECO103_1326.ECO103_3046,iECO111_1330.ECO111_3253,iECO26_1355.ECO26_3576,iECOK1_1307.ECOK1_2878,iECP_1309.ECP_2534,iECS88_1305.ECS88_2705,iECSE_1348.ECSE_2815,iECSF_1327.ECSF_2373,iECSP_1301.ECSP_3473,iECUMN_1333.ECUMN_2849,iECW_1372.ECW_m2755,iECs_1301.ECs3395,iEKO11_1354.EKO11_1204,iETEC_1333.ETEC_2686,iEcDH1_1363.EcDH1_1139,iEcE24377_1341.EcE24377A_2814,iEcHS_1320.EcHS_A2680,iEcSMS35_1347.EcSMS35_2682,iEcolC_1368.EcolC_1148,iG2583_1286.G2583_3059,iJO1366.b2529,iSDY_1059.SDY_2725,iSFV_1184.SFV_2577,iSF_1195.SF2576,iSFxv_1172.SFxv_2832,iSSON_1240.SSON_2611,iS_1188.S2748,iUMN146_1321.UM146_04055,iUMNK88_1353.UMNK88_3182,iUTI89_1310.UTI89_C2851,iWFL_1372.ECW_m2755,iY75_1357.Y75_RS13200,iZ_1308.Z3796,ic_1306.c3055 Bacteria 1RD5K@1224,2KWB3@206389,2VQ2I@28216,COG0822@1,COG0822@2 NA|NA|NA C A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters HGDHCNMN_01639 1000565.METUNv1_00564 8.6e-48 196.1 Rhodocyclales iscA GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0019538,GO:0022607,GO:0031163,GO:0034986,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901564 ko:K13628 ko00000,ko03016 iAPECO1_1312.APECO1_3997,iB21_1397.B21_02384,iBWG_1329.BWG_2292,iE2348C_1286.E2348C_2811,iEC042_1314.EC042_2732,iEC55989_1330.EC55989_2813,iECABU_c1320.ECABU_c28340,iECBD_1354.ECBD_1156,iECB_1328.ECB_02420,iECDH10B_1368.ECDH10B_2695,iECD_1391.ECD_02420,iECED1_1282.ECED1_2959,iECIAI1_1343.ECIAI1_2580,iECIAI39_1322.ECIAI39_2729,iECNA114_1301.ECNA114_2607,iECO103_1326.ECO103_3045,iECO111_1330.ECO111_3252,iECO26_1355.ECO26_3575,iECOK1_1307.ECOK1_2877,iECP_1309.ECP_2533,iECS88_1305.ECS88_2704,iECSE_1348.ECSE_2814,iECSF_1327.ECSF_2372,iECSP_1301.ECSP_3472,iECUMN_1333.ECUMN_2848,iECW_1372.ECW_m2754,iECs_1301.ECs3394,iEKO11_1354.EKO11_1205,iETEC_1333.ETEC_2685,iEcDH1_1363.EcDH1_1140,iEcSMS35_1347.EcSMS35_2681,iEcolC_1368.EcolC_1149,iG2583_1286.G2583_3058,iJO1366.b2528,iLF82_1304.LF82_1120,iNRG857_1313.NRG857_12580,iSBO_1134.SBO_2552,iSDY_1059.SDY_2724,iSF_1195.SF2575,iSSON_1240.SSON_2610,iS_1188.S2747,iUMN146_1321.UM146_04060,iUMNK88_1353.UMNK88_3181,iWFL_1372.ECW_m2754,iY75_1357.Y75_RS13195,iZ_1308.Z3795,ic_1306.c3053 Bacteria 1RH6T@1224,2KWP9@206389,2VSKY@28216,COG0316@1,COG0316@2 NA|NA|NA S Belongs to the HesB IscA family HGDHCNMN_01640 748247.AZKH_2812 1.4e-55 222.6 Rhodocyclales hscB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051604,GO:0071704,GO:0097428,GO:1901564,GO:1902494,GO:1990230,GO:1990234 ko:K04082,ko:K05801 ko00000,ko03029,ko03110 Bacteria 1RHZX@1224,2KWCY@206389,2VSD5@28216,COG1076@1,COG1076@2 NA|NA|NA O Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA HGDHCNMN_01641 497321.C664_00130 2.4e-267 927.9 Rhodocyclales hscA GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006807,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010467,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051604,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070417,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0097428,GO:0140110,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1903506,GO:1990230,GO:1990234,GO:2001141 ko:K04043,ko:K04044 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33,1.A.33.1 Bacteria 1MVQI@1224,2KUV2@206389,2VHGV@28216,COG0443@1,COG0443@2 NA|NA|NA O Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB HGDHCNMN_01642 1304883.KI912532_gene2402 6.8e-51 206.5 Rhodocyclales fdx ko:K04755 ko00000 Bacteria 1RHDC@1224,2KWP0@206389,2VSQE@28216,COG0633@1,COG0633@2 NA|NA|NA C Ferredoxin, 2Fe-2S type, ISC system HGDHCNMN_01643 76114.ebA6395 1.2e-25 121.7 Rhodocyclales iscX GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 Bacteria 1N7C1@1224,2KXB7@206389,2VVQU@28216,COG2975@1,COG2975@2 NA|NA|NA S FeS assembly protein IscX HGDHCNMN_01644 76114.ebA6393 1.6e-53 215.7 Rhodocyclales gpo 1.11.1.22,1.11.1.9 ko:K00432,ko:K20207 ko00480,ko00590,ko04918,map00480,map00590,map04918 R00274,R07034,R07035 RC00011,RC00982 ko00000,ko00001,ko01000 iJN678.slr1171 Bacteria 1RD1R@1224,2KWCA@206389,2VR4K@28216,COG0386@1,COG0386@2 NA|NA|NA O Belongs to the glutathione peroxidase family HGDHCNMN_01645 62928.azo2009 1.7e-62 245.4 Rhodocyclales ko:K02485 ko00000,ko02022 Bacteria 1QUN7@1224,2KWBX@206389,2WGQ0@28216,COG0784@1,COG0784@2 NA|NA|NA T response regulator HGDHCNMN_01646 76114.ebA6390 1.7e-120 439.1 Rhodocyclales prmB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009007,GO:0009008,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0032775,GO:0034641,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044728,GO:0046483,GO:0071704,GO:0090304,GO:0140096,GO:0140097,GO:1901360,GO:1901564 2.1.1.297,2.1.1.298 ko:K02493,ko:K07320 R10806 RC00003,RC03279 ko00000,ko01000,ko03009,ko03012 Bacteria 1MX8Q@1224,2KV36@206389,2VIPK@28216,COG2890@1,COG2890@2 NA|NA|NA J Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue HGDHCNMN_01647 1000565.METUNv1_01319 1e-54 219.5 Rhodocyclales dapE GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009014,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0032153,GO:0042802,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0046872,GO:0046914,GO:0050897,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.1.18 ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R02734 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_2485,iIT341.HP0212 Bacteria 1MW6G@1224,2KUDN@206389,2VHRF@28216,COG0624@1,COG0624@2 NA|NA|NA E Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls HGDHCNMN_01650 1123367.C666_05675 1.3e-271 942.2 Rhodocyclales parE GO:0000819,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0022402,GO:0030541,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0098813,GO:0140097,GO:1901360 5.99.1.3 ko:K02470,ko:K02622 ko00000,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 1MVH1@1224,2KUY6@206389,2VHBQ@28216,COG0187@1,COG0187@2 NA|NA|NA L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule HGDHCNMN_01651 748247.AZKH_1518 6.5e-23 114.0 Rhodocyclales Bacteria 1RHPD@1224,2KX7Y@206389,2VV5X@28216,COG3439@1,COG3439@2 NA|NA|NA S Domain of unknown function DUF302 HGDHCNMN_01652 159087.Daro_1045 1e-149 536.6 Rhodocyclales Bacteria 1P7S0@1224,2KY9M@206389,2VNY2@28216,COG3203@1,COG3203@2 NA|NA|NA M Gram-negative porin HGDHCNMN_01653 1123487.KB892834_gene2737 1.1e-120 439.5 Rhodocyclales pyrF GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10,4.1.1.23 ko:K01591,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00051 R00965,R01870,R08231 RC00063,RC00409,RC00611 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS17585 Bacteria 1MWH5@1224,2KUGT@206389,2VHAB@28216,COG0284@1,COG0284@2 NA|NA|NA F Belongs to the OMP decarboxylase family. Type 2 subfamily HGDHCNMN_01654 1538295.JY96_18395 4.5e-107 394.4 unclassified Burkholderiales Bacteria 1KJRG@119065,1MWAI@1224,2VIWG@28216,COG1305@1,COG1305@2 NA|NA|NA E Transglutaminase/protease-like homologues HGDHCNMN_01655 1286631.X805_03300 6.1e-35 154.1 Betaproteobacteria Bacteria 1RBS9@1224,28KEQ@1,2VQ7G@28216,2ZA0Y@2 NA|NA|NA S Short C-terminal domain HGDHCNMN_01656 1163409.UUA_01474 5.6e-72 277.3 Xanthomonadales Bacteria 1RDHE@1224,1S3U0@1236,1X6QC@135614,COG0500@1,COG0500@2 NA|NA|NA Q Protein of unknown function (DUF938) HGDHCNMN_01657 1349767.GJA_810 6.8e-74 284.3 Oxalobacteraceae gltR Bacteria 1N8HZ@1224,2VJGT@28216,4740Y@75682,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HGDHCNMN_01658 991905.SL003B_2977 3.7e-48 199.1 unclassified Alphaproteobacteria Bacteria 1MW6T@1224,2U1KC@28211,4BR4Q@82117,COG0477@1,COG2814@2 NA|NA|NA EGP Uncharacterised MFS-type transporter YbfB HGDHCNMN_01659 78245.Xaut_1169 6.5e-21 107.1 Xanthobacteraceae dmpI 5.3.2.6 ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 M00569 R03966,R05389 RC01040,RC01355 ko00000,ko00001,ko00002,ko01000 Bacteria 1RAXK@1224,2U5S6@28211,3EZTK@335928,COG1942@1,COG1942@2 NA|NA|NA S 4-oxalocrotonate tautomerase HGDHCNMN_01660 406817.XNC1_4558 5e-23 113.2 Gammaproteobacteria dmpI 5.3.2.6 ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 M00569 R03966,R05389 RC01040,RC01355 ko00000,ko00001,ko00002,ko01000 Bacteria 1N6WW@1224,1SC97@1236,COG1942@1,COG1942@2 NA|NA|NA G 4-oxalocrotonate tautomerase HGDHCNMN_01661 1304883.KI912532_gene3008 2e-151 542.0 Rhodocyclales futA1 GO:0005575,GO:0005623,GO:0042597,GO:0044464 ko:K02012 ko02010,map02010 M00190 ko00000,ko00001,ko00002,ko02000 3.A.1.10 iJN678.sufA Bacteria 1MUEG@1224,2KVDU@206389,2VHI6@28216,COG1840@1,COG1840@2 NA|NA|NA P ABC-type Fe3 transport system, periplasmic component HGDHCNMN_01662 1304883.KI912532_gene3010 5.2e-245 853.6 Rhodocyclales fbpB ko:K02011 ko02010,map02010 M00190 ko00000,ko00001,ko00002,ko02000 3.A.1.10 Bacteria 1MWEV@1224,2KVS9@206389,2VI20@28216,COG1178@1,COG1178@2 NA|NA|NA P ABC-type Fe3 transport system, permease component HGDHCNMN_01663 640081.Dsui_2943 3.4e-157 561.2 Rhodocyclales fbpC 3.6.3.30 ko:K02010 ko02010,map02010 M00190 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.10 Bacteria 1MU3I@1224,2KVQ7@206389,2VHGM@28216,COG3842@1,COG3842@2 NA|NA|NA P Belongs to the ABC transporter superfamily HGDHCNMN_01664 1123401.JHYQ01000002_gene2635 1e-71 276.6 Thiotrichales rluA 5.4.99.28,5.4.99.29 ko:K06177 ko00000,ko01000,ko03009,ko03016 Bacteria 1MVJ5@1224,1RN4N@1236,460VZ@72273,COG0564@1,COG0564@2 NA|NA|NA J RNA pseudouridylate synthase HGDHCNMN_01665 497321.C664_04887 7e-100 371.7 Rhodocyclales Bacteria 1NRP8@1224,2KVM2@206389,2VGZQ@28216,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_01666 640081.Dsui_3236 5.6e-232 810.1 Rhodocyclales gcs2 Bacteria 1MUAD@1224,2KV17@206389,2VI55@28216,COG2308@1,COG2308@2 NA|NA|NA S Circularly permuted ATP-grasp type 2 HGDHCNMN_01667 62928.azo1515 3.8e-120 438.0 Rhodocyclales MA20_32425 Bacteria 1MVZK@1224,2KV8E@206389,2VIB5@28216,COG2307@1,COG2307@2 NA|NA|NA S A predicted alpha-helical domain with a conserved ER motif. HGDHCNMN_01668 62928.azo2060 3.5e-120 438.7 Rhodocyclales mltD GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 ko:K08307,ko:K12204 ko00000,ko01000,ko01011,ko02044 3.A.7.10.1,3.A.7.9.1 Bacteria 1MWKE@1224,2KUQ6@206389,2VIR7@28216,COG0741@1,COG0741@2,COG1388@1,COG1388@2 NA|NA|NA M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) HGDHCNMN_01669 62928.azo2059 7.5e-124 450.3 Rhodocyclales Bacteria 1R7HC@1224,2KUK0@206389,2VMMZ@28216,COG2199@1,COG3706@2 NA|NA|NA T diguanylate cyclase HGDHCNMN_01670 1163617.SCD_n01165 3.9e-83 314.7 Betaproteobacteria gloB GO:0003674,GO:0003824,GO:0004416,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 3.1.2.6 ko:K01069 ko00620,map00620 R01736 RC00004,RC00137 ko00000,ko00001,ko01000 Bacteria 1MU8Q@1224,2VGZG@28216,COG0491@1,COG0491@2 NA|NA|NA S Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid HGDHCNMN_01671 76114.ebA6459 1.4e-83 316.2 Rhodocyclales yafS Bacteria 1QTWC@1224,2KVQS@206389,2VQ89@28216,COG0500@1,COG2226@2 NA|NA|NA Q Methyltransferase domain HGDHCNMN_01672 305700.B447_04863 6.9e-78 296.6 Rhodocyclales rnhA 3.1.26.4 ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1RCZ1@1224,2KWIG@206389,2VR4W@28216,COG0328@1,COG0328@2 NA|NA|NA L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids HGDHCNMN_01673 76114.ebA6456 7.6e-92 343.6 Rhodocyclales dnaQ GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7,3.1.26.4 ko:K02342,ko:K14159 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MV8Z@1224,2KU7N@206389,2VH1Z@28216,COG0847@1,COG0847@2 NA|NA|NA L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease HGDHCNMN_01674 748247.AZKH_1838 1.2e-130 472.6 Rhodocyclales fabI GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0034641,GO:0042364,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.10,1.3.1.9 ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 M00083,M00572 R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671 RC00052,RC00076,RC00120 ko00000,ko00001,ko00002,ko01000,ko01004 iECUMN_1333.ECUMN_1592 Bacteria 1MV05@1224,2KV9V@206389,2VIHE@28216,COG0623@1,COG0623@2 NA|NA|NA I Enoyl- acyl-carrier-protein reductase NADH HGDHCNMN_01675 76114.ebA6662 3.1e-306 1057.4 Rhodocyclales hbpA ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1R87R@1224,2KU6I@206389,2VKFJ@28216,COG4166@1,COG4166@2 NA|NA|NA E extracellular solute-binding protein HGDHCNMN_01676 358220.C380_12030 1.9e-46 191.8 Betaproteobacteria Bacteria 1RKAQ@1224,2VWGP@28216,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese Homology Domain HGDHCNMN_01677 497321.C664_19236 6.1e-90 337.0 Rhodocyclales rsmJ 2.1.1.11,2.1.1.242 ko:K03428,ko:K07003,ko:K15984 ko00860,ko01100,ko01110,map00860,map01100,map01110 R04237 RC00003,RC00460 ko00000,ko00001,ko01000,ko03009 Bacteria 1QVIM@1224,2KZWI@206389,2WGSS@28216,COG2265@1,COG2265@2 NA|NA|NA J Tellurite resistance protein TehB HGDHCNMN_01679 246197.MXAN_6008 4.4e-12 79.7 Myxococcales chiD GO:0003674,GO:0003824,GO:0004553,GO:0004568,GO:0005575,GO:0005576,GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016798,GO:0017144,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0071704,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.2.1.14 ko:K01183 ko00520,ko01100,map00520,map01100 R01206,R02334 RC00467 ko00000,ko00001,ko01000 GH18 Bacteria 1PJW4@1224,2X7IF@28221,2Z0V2@29,43C83@68525,COG3469@1,COG3469@2 NA|NA|NA G Glycosyl hydrolases family 18 HGDHCNMN_01682 765911.Thivi_1556 5.6e-62 244.2 Chromatiales Bacteria 1MZ5R@1224,1SEBH@1236,1X1E1@135613,COG1675@1,COG1675@2 NA|NA|NA K transcription initiation from RNA polymerase II promoter HGDHCNMN_01683 658187.LDG_6143 2.3e-260 905.2 Bacteria ko:K03546,ko:K06919,ko:K07452,ko:K08482,ko:K09384,ko:K10954 ko05110,map05110 ko00000,ko00001,ko01000,ko02042,ko02048,ko03400 Bacteria COG0467@1,COG0467@2,COG1119@1,COG1119@2 NA|NA|NA T regulation of circadian rhythm HGDHCNMN_01684 243365.CV_0648 1.1e-08 65.5 Neisseriales ko:K07733 ko00000,ko03000 Bacteria 1NGB9@1224,2KS5W@206351,2VXRR@28216,COG3311@1,COG3311@2 NA|NA|NA K Prophage CP4-57 regulatory protein (AlpA) HGDHCNMN_01686 946483.Cenrod_1343 0.0 1436.4 Comamonadaceae mod 2.1.1.72 ko:K07316 ko00000,ko01000,ko02048 Bacteria 1MX9M@1224,2VGZB@28216,4ACHT@80864,COG2189@1,COG2189@2 NA|NA|NA L DNA methylase N-4 N-6 HGDHCNMN_01687 1078020.KEK_06735 0.0 1639.8 Bacteria 3.1.21.5 ko:K01156 ko00000,ko01000,ko02048 Bacteria COG1061@1,COG1061@2 NA|NA|NA L Type III restriction enzyme res subunit HGDHCNMN_01688 477228.YO5_08408 2.2e-156 558.9 Pseudomonas stutzeri group int Bacteria 1MU23@1224,1RMJ1@1236,1Z2PJ@136846,COG0582@1,COG0582@2 NA|NA|NA L phage integrase family HGDHCNMN_01689 1123392.AQWL01000003_gene463 2.4e-134 485.3 Betaproteobacteria Bacteria 1MV94@1224,2VMCT@28216,COG4129@1,COG4129@2 NA|NA|NA S Fusaric acid resistance protein-like HGDHCNMN_01690 1095769.CAHF01000003_gene1022 4.2e-75 288.1 Betaproteobacteria Bacteria 1MWR2@1224,2VQAV@28216,COG0726@1,COG0726@2 NA|NA|NA G polysaccharide deacetylase HGDHCNMN_01691 76114.ebA6453 0.0 1302.7 Rhodocyclales mutS GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 Bacteria 1MUGX@1224,2KV02@206389,2VI3Z@28216,COG0249@1,COG0249@2 NA|NA|NA L that it carries out the mismatch recognition step. This protein has a weak ATPase activity HGDHCNMN_01692 338969.Rfer_4060 8e-81 307.4 Betaproteobacteria Bacteria 1MV0H@1224,2WHIF@28216,COG1409@1,COG1409@2 NA|NA|NA S Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes HGDHCNMN_01693 267608.RSp0956 1.1e-09 69.3 Betaproteobacteria Bacteria 1N9I7@1224,2CHK6@1,2VWH1@28216,333A9@2 NA|NA|NA HGDHCNMN_01694 497321.C664_00070 2.2e-81 308.9 Rhodocyclales speE 2.5.1.16 ko:K00797 ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100 M00034,M00133 R01920,R02869,R08359 RC00021,RC00053 ko00000,ko00001,ko00002,ko01000 Bacteria 1RBWW@1224,2KUTS@206389,2VK7S@28216,COG0421@1,COG0421@2 NA|NA|NA H Spermidine synthase HGDHCNMN_01695 85643.Tmz1t_0753 5e-11 72.8 Rhodocyclales yngG GO:0003674,GO:0003824,GO:0004419,GO:0005488,GO:0016829,GO:0016830,GO:0016833,GO:0043167,GO:0043169,GO:0046872 4.1.3.4 ko:K01640 ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146 M00036,M00088 R01360,R08090 RC00502,RC00503,RC01118,RC01946 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUMX@1224,2KUNG@206389,2VIUW@28216,COG0119@1,COG0119@2 NA|NA|NA E HMGL-like HGDHCNMN_01696 85643.Tmz1t_0753 1.7e-33 148.3 Rhodocyclales yngG GO:0003674,GO:0003824,GO:0004419,GO:0005488,GO:0016829,GO:0016830,GO:0016833,GO:0043167,GO:0043169,GO:0046872 4.1.3.4 ko:K01640 ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146 M00036,M00088 R01360,R08090 RC00502,RC00503,RC01118,RC01946 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUMX@1224,2KUNG@206389,2VIUW@28216,COG0119@1,COG0119@2 NA|NA|NA E HMGL-like HGDHCNMN_01697 76114.ebA6687 3.9e-95 354.4 Rhodocyclales gltA GO:0003674,GO:0003824,GO:0004108,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016740,GO:0016746,GO:0016999,GO:0017144,GO:0019752,GO:0036440,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046912,GO:0055114,GO:0071704,GO:0072350 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 iIT341.HP0026 Bacteria 1MUKX@1224,2KVDB@206389,2VIJF@28216,COG0372@1,COG0372@2 NA|NA|NA H Belongs to the citrate synthase family HGDHCNMN_01698 85643.Tmz1t_2544 0.0 1481.5 Rhodocyclales sucA GO:0000287,GO:0003674,GO:0003824,GO:0004591,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006103,GO:0008150,GO:0008152,GO:0008683,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016624,GO:0016740,GO:0016744,GO:0016829,GO:0016830,GO:0016831,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0030312,GO:0032991,GO:0040007,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0045333,GO:0046872,GO:0050439,GO:0051186,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:1902494,GO:1990204,GO:1990234 1.2.4.2,4.1.1.71 ko:K00164,ko:K01616 ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00032 R00621,R01933,R01940,R03316,R08549 RC00004,RC00027,RC00627,RC02743,RC02833,RC02883 br01601,ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1248c Bacteria 1MVBF@1224,2KVN8@206389,2VJ0G@28216,COG0567@1,COG0567@2 NA|NA|NA C Dehydrogenase E1 component HGDHCNMN_01699 76114.ebA6684 3.2e-172 611.3 Rhodocyclales sucB 2.3.1.61 ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00032 R02570,R02571,R08549 RC00004,RC02727,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2766 Bacteria 1MUJD@1224,2KVIM@206389,2VIEM@28216,COG0508@1,COG0508@2 NA|NA|NA C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) HGDHCNMN_01700 497321.C664_02085 6.4e-228 796.6 Rhodocyclales lpdA GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 iE2348C_1286.E2348C_4372,iJN746.PP_4187 Bacteria 1MU2U@1224,2KUQ1@206389,2VI6G@28216,COG1249@1,COG1249@2 NA|NA|NA C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes HGDHCNMN_01701 748247.AZKH_1827 5.1e-172 610.5 Rhodocyclales zapE GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032153,GO:0044424,GO:0044464,GO:0051301 ko:K06916 ko00000,ko03036 Bacteria 1MUUW@1224,2KUMJ@206389,2VHQX@28216,COG1485@1,COG1485@2 NA|NA|NA S AFG1-like ATPase HGDHCNMN_01702 159087.Daro_2854 1.4e-38 166.8 Rhodocyclales ko:K02453 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1RCNA@1224,2KWAH@206389,2WGZA@28216,COG4796@1,COG4796@2 NA|NA|NA U Bacterial type II and III secretion system protein HGDHCNMN_01703 62928.azo1560 3.1e-289 1000.7 Rhodocyclales dinG GO:0003674,GO:0003824,GO:0004386,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008026,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:1901360 3.6.4.12 ko:K03722 ko00000,ko01000,ko03400 Bacteria 1MVCU@1224,2KV34@206389,2VH0V@28216,COG1199@1,COG1199@2 NA|NA|NA KL helicase HGDHCNMN_01705 290397.Adeh_2278 7.1e-41 173.3 Myxococcales 3.5.2.6 ko:K17837 ko01501,map01501 R06363 RC01499 ko00000,ko00001,ko01000 Bacteria 1MX4H@1224,2WJ2Y@28221,2YW6C@29,42PY0@68525,COG0491@1,COG0491@2 NA|NA|NA S Metallo-beta-lactamase superfamily HGDHCNMN_01706 375286.mma_0456 5.6e-16 90.9 Betaproteobacteria ko:K03671,ko:K03673 ko01503,ko04621,ko05418,map01503,map04621,map05418 M00728 ko00000,ko00001,ko00002,ko03110 Bacteria 1NBTN@1224,2VW6S@28216,COG0526@1,COG0526@2 NA|NA|NA CO COG0526, thiol-disulfide isomerase and thioredoxins HGDHCNMN_01707 1123392.AQWL01000001_gene1593 1.1e-17 95.9 Hydrogenophilales Bacteria 1KT8P@119069,1N71Z@1224,2VWE5@28216,COG2010@1,COG2010@2 NA|NA|NA C Cytochrome c HGDHCNMN_01708 159087.Daro_3127 5.1e-62 244.2 Rhodocyclales Bacteria 1RDYR@1224,2KXAZ@206389,2VRSF@28216,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese Homology Domain HGDHCNMN_01709 62928.azo1331 3.4e-138 498.0 Rhodocyclales aapJ ko:K09969 ko02010,map02010 M00232 ko00000,ko00001,ko00002,ko02000 3.A.1.3.18,3.A.1.3.7,3.A.1.3.8 Bacteria 1MV5D@1224,2KVRG@206389,2VIN1@28216,COG0834@1,COG0834@2 NA|NA|NA ET Bacterial periplasmic substrate-binding proteins HGDHCNMN_01710 62928.azo1330 7.2e-82 310.8 Rhodocyclales ko:K09970 ko02010,map02010 M00232 ko00000,ko00001,ko00002,ko02000 3.A.1.3.18,3.A.1.3.7,3.A.1.3.8 Bacteria 1MV0S@1224,2KWD4@206389,2VIDZ@28216,COG4597@1,COG4597@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component HGDHCNMN_01711 1123487.KB892840_gene40 5.7e-85 321.2 Rhodocyclales aapM ko:K02029,ko:K09971 ko02010,map02010 M00232,M00236 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.18,3.A.1.3.7,3.A.1.3.8 Bacteria 1MV3I@1224,2KW1E@206389,2VIXA@28216,COG0765@1,COG0765@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component HGDHCNMN_01712 1169143.KB911034_gene1703 3.6e-48 197.6 Burkholderiaceae Bacteria 1K7VW@119060,1RF7A@1224,2W1WA@28216,COG0251@1,COG0251@2 NA|NA|NA J Endoribonuclease L-PSP HGDHCNMN_01713 1454004.AW11_02624 4.3e-105 387.9 Betaproteobacteria Bacteria 1MZTA@1224,2VJTZ@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_01714 686340.Metal_0558 3e-70 271.6 Methylococcales azoR GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006950,GO:0006979,GO:0008081,GO:0008150,GO:0008152,GO:0008770,GO:0009058,GO:0009108,GO:0009987,GO:0010181,GO:0016491,GO:0016651,GO:0016655,GO:0016661,GO:0016787,GO:0016788,GO:0032553,GO:0036094,GO:0042578,GO:0043167,GO:0043168,GO:0044237,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0046857,GO:0048037,GO:0050446,GO:0050662,GO:0050896,GO:0051186,GO:0051188,GO:0055114,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363 ko:K01118 ko00000,ko01000 Bacteria 1P59R@1224,1S337@1236,1XG7T@135618,COG1182@1,COG1182@2 NA|NA|NA C Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity HGDHCNMN_01715 1454004.AW11_02623 8.8e-100 370.2 unclassified Betaproteobacteria yhhW ko:K06911 ko00000 Bacteria 1KQYT@119066,1MWIP@1224,2VHGK@28216,COG1741@1,COG1741@2 NA|NA|NA S Pirin C-terminal cupin domain HGDHCNMN_01716 522306.CAP2UW1_3651 5.1e-30 137.1 Betaproteobacteria Bacteria 1N3U0@1224,2E149@1,2VUNC@28216,32WJH@2 NA|NA|NA HGDHCNMN_01718 85643.Tmz1t_2040 4.7e-101 374.4 Rhodocyclales yeaD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 4.2.1.9,5.1.3.15 ko:K01687,ko:K01792 ko00010,ko00290,ko00770,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00010,map00290,map00770,map01100,map01110,map01120,map01130,map01210,map01230 M00019,M00570 R01209,R02739,R04441,R05070 RC00468,RC00563,RC01714 ko00000,ko00001,ko00002,ko01000 Bacteria 1Q7VN@1224,2KUFY@206389,2VKZK@28216,COG0676@1,COG0676@2 NA|NA|NA G Belongs to the glucose-6-phosphate 1-epimerase family HGDHCNMN_01719 443143.GM18_3259 7.6e-74 283.5 Deltaproteobacteria tag 3.2.2.20 ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1R9X5@1224,2WMPT@28221,42QWV@68525,COG2818@1,COG2818@2 NA|NA|NA L PFAM Methyladenine glycosylase HGDHCNMN_01720 748247.AZKH_2212 0.0 1383.2 Rhodocyclales yfiQ 6.2.1.13 ko:K01905,ko:K09181,ko:K22224 ko00010,ko00620,ko00640,ko01100,ko01120,map00010,map00620,map00640,map01100,map01120 R00229,R00920 RC00004,RC00012,RC00014 ko00000,ko00001,ko01000,ko01004 Bacteria 1MW98@1224,2KUDI@206389,2VI9R@28216,COG0045@1,COG0045@2,COG0454@1,COG0454@2,COG1042@1,COG1042@2 NA|NA|NA CM Acyl-CoA synthetase (NDP forming) HGDHCNMN_01721 62928.azo1662 1.3e-110 407.9 Rhodocyclales Bacteria 1NSQ1@1224,2KUJ4@206389,2VQJ3@28216,COG4251@1,COG4251@2 NA|NA|NA T Signal transduction histidine kinase HGDHCNMN_01725 497321.C664_06463 5.2e-171 607.4 Rhodocyclales ko:K10941 ko02020,ko02025,ko05111,map02020,map02025,map05111 ko00000,ko00001,ko03000 Bacteria 1NU8B@1224,2KVUJ@206389,2VHQS@28216,COG3829@1,COG3829@2 NA|NA|NA K Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains HGDHCNMN_01726 1268622.AVS7_00216 5.4e-25 120.9 Betaproteobacteria Bacteria 1N96Q@1224,2E8DE@1,2VW0S@28216,332RW@2 NA|NA|NA HGDHCNMN_01727 305700.B447_01371 2.4e-104 385.6 Rhodocyclales tdt ko:K03304 ko00000,ko02000 2.A.16.1 Bacteria 1MVPG@1224,2KXGC@206389,2VKP1@28216,COG1275@1,COG1275@2 NA|NA|NA P COG1275 Tellurite resistance protein and related permeases HGDHCNMN_01728 1454004.AW11_01317 1.2e-80 306.2 Betaproteobacteria petA 1.10.2.2 ko:K00411 ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152 ko00000,ko00001,ko00002,ko01000 Bacteria 1RAA2@1224,2VK46@28216,COG0723@1,COG0723@2 NA|NA|NA C Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis HGDHCNMN_01729 62928.azo1230 3.3e-09 67.8 Rhodocyclales Bacteria 1N87C@1224,2E43A@1,2KZ7G@206389,2VYDQ@28216,32YZN@2 NA|NA|NA S membrane HGDHCNMN_01730 582744.Msip34_1584 2.1e-40 172.6 Nitrosomonadales blh Bacteria 1MURA@1224,2KM3H@206350,2VJYK@28216,COG0491@1,COG0491@2 NA|NA|NA S Metallo-beta-lactamase superfamily HGDHCNMN_01731 1485544.JQKP01000001_gene1202 1.5e-28 131.7 Nitrosomonadales fdx1 ko:K03522,ko:K05337 ko00000,ko04147 Bacteria 1MZ6H@1224,2VTZ1@28216,44W12@713636,COG1145@1,COG1145@2 NA|NA|NA C 4Fe-4S binding domain HGDHCNMN_01734 748280.NH8B_3362 1.7e-127 462.2 Neisseriales pcm 2.1.1.77 ko:K00573 ko00000,ko01000 Bacteria 1NMMQ@1224,2KPQX@206351,2VH3B@28216,COG2518@1,COG2518@2 NA|NA|NA O Methyltransferase domain HGDHCNMN_01735 1120999.JONM01000001_gene1376 7.1e-74 283.5 Neisseriales ko:K09941 ko00000 Bacteria 1RDE0@1224,2KQWB@206351,2VQ9D@28216,COG3310@1,COG3310@2 NA|NA|NA S Psort location Cytoplasmic, score 8.96 HGDHCNMN_01736 1163617.SCD_n00656 7.8e-121 440.3 Betaproteobacteria ylqF GO:0003674,GO:0003824,GO:0003924,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022613,GO:0042254,GO:0044085,GO:0071840 ko:K14540 ko00000,ko03009 Bacteria 1MV5H@1224,2VHAG@28216,COG1161@1,COG1161@2 NA|NA|NA S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity HGDHCNMN_01737 85643.Tmz1t_0070 7.7e-143 513.5 Rhodocyclales 2.1.1.191 ko:K06969 ko00000,ko01000,ko03009 Bacteria 1R6GY@1224,2KYCD@206389,2VNTR@28216,COG1092@1,COG1092@2 NA|NA|NA J Belongs to the methyltransferase superfamily HGDHCNMN_01738 1304883.KI912532_gene3161 3.3e-182 644.8 Rhodocyclales Bacteria 1R6J6@1224,2KXC3@206389,2VPCU@28216,COG0664@1,COG0664@2,COG0668@1,COG0668@2 NA|NA|NA MT Mechanosensitive ion channel HGDHCNMN_01739 497321.C664_18267 9.6e-44 183.0 Rhodocyclales hit ko:K02503 ko00000,ko04147 Bacteria 1N422@1224,2KWFC@206389,2VT5W@28216,COG0537@1,COG0537@2 NA|NA|NA FG COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases HGDHCNMN_01740 76114.ebA6064 5.9e-35 153.7 Rhodocyclales ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Bacteria 1N8B0@1224,2KX8P@206389,2VW5T@28216,COG0526@1,COG0526@2 NA|NA|NA CO COG0526 Thiol-disulfide isomerase and thioredoxins HGDHCNMN_01741 76114.ebD101 1.4e-21 108.6 Rhodocyclales Bacteria 1NIIN@1224,2EQ5B@1,2KXP1@206389,2VXX7@28216,33HRN@2 NA|NA|NA HGDHCNMN_01742 1121004.ATVC01000053_gene761 3.5e-51 208.4 Betaproteobacteria Bacteria 1R7AG@1224,2DB6R@1,2VQZS@28216,2Z7I2@2 NA|NA|NA HGDHCNMN_01743 85643.Tmz1t_1793 1.2e-162 579.7 Rhodocyclales ydcP ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Bacteria 1MUQG@1224,2KVK7@206389,2VHHU@28216,COG0826@1,COG0826@2 NA|NA|NA O Peptidase U32 HGDHCNMN_01744 1265502.KB905935_gene3060 6.3e-18 95.9 Comamonadaceae der GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 ko:K03977 ko00000,ko03009 Bacteria 1MU9S@1224,2VI8D@28216,4ACK5@80864,COG1160@1,COG1160@2 NA|NA|NA S GTPase that plays an essential role in the late steps of ribosome biogenesis HGDHCNMN_01747 237727.NAP1_14348 2.6e-86 326.6 Proteobacteria Bacteria 1P3MU@1224,2DXS1@1,32V40@2 NA|NA|NA HGDHCNMN_01748 497321.C664_08363 8.7e-148 530.0 Rhodocyclales dnaN 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MVD9@1224,2KV12@206389,2VH9B@28216,COG0592@1,COG0592@2 NA|NA|NA L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria HGDHCNMN_01749 748247.AZKH_0001 1.7e-196 692.2 Rhodocyclales dnaA GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010556,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1990837,GO:2000112 ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 Bacteria 1MU5H@1224,2KUSQ@206389,2VHH0@28216,COG0593@1,COG0593@2 NA|NA|NA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids HGDHCNMN_01750 1123354.AUDR01000012_gene1665 1.3e-17 95.5 Hydrogenophilales rnpA GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904 3.1.26.5 ko:K03536,ko:K08998 ko00000,ko01000,ko03016 Bacteria 1KRWN@119069,1PVTH@1224,2VYR7@28216,COG0594@1,COG0594@2 NA|NA|NA J Ribonuclease P HGDHCNMN_01751 497321.C664_08383 3.2e-27 127.1 Rhodocyclales yidD ko:K08998 ko00000 Bacteria 1N6U4@1224,2KX78@206389,2VVTR@28216,COG0759@1,COG0759@2 NA|NA|NA S Could be involved in insertion of integral membrane proteins into the membrane HGDHCNMN_01752 748247.AZKH_4608 3.7e-211 741.1 Rhodocyclales yidC GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032940,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 Bacteria 1MV5M@1224,2KUBX@206389,2VHIA@28216,COG0706@1,COG0706@2 NA|NA|NA U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins HGDHCNMN_01753 748247.AZKH_4607 6.8e-179 633.6 Rhodocyclales mnmE GO:0000166,GO:0001510,GO:0001882,GO:0001883,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006457,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009268,GO:0009451,GO:0009628,GO:0009636,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0030488,GO:0030955,GO:0031420,GO:0032259,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0061077,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 ko:K03650 R08701 RC00053,RC00209,RC00870 ko00000,ko01000,ko03016 Bacteria 1MUCQ@1224,2KVKC@206389,2VHCJ@28216,COG0486@1,COG0486@2 NA|NA|NA J Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 HGDHCNMN_01754 3988.XP_002538771.1 1.8e-11 74.7 Eukaryota Eukaryota 2D34V@1,2SQ87@2759 NA|NA|NA HGDHCNMN_01755 522306.CAP2UW1_4470 3.2e-77 295.0 Betaproteobacteria tam GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0030798,GO:0032259,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0051704 2.1.1.144,2.1.1.197 ko:K00598,ko:K02169 ko00780,ko01100,map00780,map01100 M00572 R09543 RC00003,RC00460 ko00000,ko00001,ko00002,ko01000 iECABU_c1320.ECABU_c17460,iSDY_1059.SDY_1625,ic_1306.c1942 Bacteria 1Q2Y3@1224,2VJ1P@28216,COG4106@1,COG4106@2 NA|NA|NA S Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate HGDHCNMN_01756 640081.Dsui_0032 5.4e-94 350.9 Rhodocyclales srtN ko:K12410 ko00000,ko01000 Bacteria 1QA4R@1224,2KUUM@206389,2VHMN@28216,COG0846@1,COG0846@2 NA|NA|NA K COG0846 NAD-dependent protein deacetylases, SIR2 family HGDHCNMN_01757 85643.Tmz1t_4088 8.3e-81 307.0 Rhodocyclales yfcA ko:K07090 ko00000 Bacteria 1MXNM@1224,2KU9Q@206389,2VHQA@28216,COG0730@1,COG0730@2 NA|NA|NA S membrane transporter protein HGDHCNMN_01758 1121127.JAFA01000001_gene880 7.7e-51 207.6 Burkholderiaceae speE 2.5.1.16 ko:K00797 ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100 M00034,M00133 R01920,R02869,R08359 RC00021,RC00053 ko00000,ko00001,ko00002,ko01000 Bacteria 1K0VM@119060,1MVV5@1224,2WGFP@28216,COG0421@1,COG0421@2 NA|NA|NA H Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine HGDHCNMN_01759 76114.ebA2833 1.9e-141 509.2 Rhodocyclales sun GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 ko:K03500 ko00000,ko01000,ko03009 Bacteria 1MWPE@1224,2KV06@206389,2VI4V@28216,COG0144@1,COG0144@2 NA|NA|NA J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA HGDHCNMN_01760 1000565.METUNv1_03067 1.1e-49 203.4 Rhodocyclales Bacteria 1RFY7@1224,29CX4@1,2KWGK@206389,2VR98@28216,2ZZV8@2 NA|NA|NA S Domain of unknown function (DUF4390) HGDHCNMN_01761 62928.azo3983 1.9e-239 835.5 Rhodocyclales ntrY Bacteria 1MWKZ@1224,2KV2P@206389,2VIDI@28216,COG5000@1,COG5000@2 NA|NA|NA T Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation HGDHCNMN_01762 305700.B447_02276 5.5e-167 594.0 Rhodocyclales ntrX Bacteria 1MU0N@1224,2KV57@206389,2VKD8@28216,COG2204@1,COG2204@2 NA|NA|NA T COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains HGDHCNMN_01763 85643.Tmz1t_4082 1.8e-182 645.6 Rhodocyclales trkA ko:K03499,ko:K05571 ko00000,ko02000 2.A.38.1,2.A.38.4,2.A.63.1,2.A.63.2 Bacteria 1MW8R@1224,2KUYB@206389,2VIH1@28216,COG0569@1,COG0569@2 NA|NA|NA C COG0569 K transport systems, NAD-binding component HGDHCNMN_01764 1000565.METUNv1_03482 1.4e-185 656.0 Rhodocyclales trkH ko:K03498 ko00000,ko02000 2.A.38.1,2.A.38.4 Bacteria 1MUIJ@1224,2KUF7@206389,2VH82@28216,COG0168@1,COG0168@2 NA|NA|NA P Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA HGDHCNMN_01765 1123367.C666_15280 2.6e-173 614.8 Rhodocyclales hemE GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019353,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0033526,GO:0034641,GO:0042168,GO:0042440,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 4.1.1.37 ko:K01599 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03197,R04972 RC00872 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUG1@1224,2KV0I@206389,2VHC2@28216,COG0407@1,COG0407@2 NA|NA|NA H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III HGDHCNMN_01766 76114.ebA2819 8.5e-264 916.4 Rhodocyclales priA GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006276,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010332,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042221,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0046677,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MUUZ@1224,2KVAV@206389,2VINT@28216,COG1198@1,COG1198@2 NA|NA|NA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA HGDHCNMN_01767 1454004.AW11_02583 7.7e-42 177.2 Betaproteobacteria Bacteria 1RHJT@1224,2BIJA@1,2VT9T@28216,32CS2@2 NA|NA|NA S CHRD domain HGDHCNMN_01769 522306.CAP2UW1_0423 9.6e-09 65.9 Betaproteobacteria Bacteria 1P9I3@1224,2C6Z2@1,2W55C@28216,2ZIAE@2 NA|NA|NA HGDHCNMN_01770 335283.Neut_0718 1.1e-69 270.8 Nitrosomonadales ko:K16554,ko:K16692 ko05111,map05111 ko00000,ko00001,ko01000,ko01001,ko02000 8.A.3.1 Bacteria 1RDNS@1224,2VKV1@28216,372ZF@32003,COG3206@1,COG3206@2 NA|NA|NA M Uncharacterized protein conserved in bacteria (DUF2325) HGDHCNMN_01771 62928.azo2084 6.1e-118 431.0 Rhodocyclales Bacteria 1PND6@1224,2KV4K@206389,2WGQ2@28216,COG2271@1,COG2271@2 NA|NA|NA G of the Major Facilitator Superfamily HGDHCNMN_01772 765911.Thivi_0314 2.4e-22 111.7 Chromatiales ko:K03413 ko02020,ko02030,map02020,map02030 M00506 ko00000,ko00001,ko00002,ko02022,ko02035 Bacteria 1N7EG@1224,1S7GW@1236,1WYNR@135613,COG2197@1,COG2197@2 NA|NA|NA KT cheY-homologous receiver domain HGDHCNMN_01773 29581.BW37_01857 1.8e-36 159.5 Oxalobacteraceae cheC ko:K03410 ko02030,map02030 ko00000,ko00001,ko02035 Bacteria 1R430@1224,2VS4K@28216,477HH@75682,COG1776@1,COG1776@2 NA|NA|NA NT Chemotaxis protein CheC, inhibitor of MCP methylation HGDHCNMN_01774 555779.Dthio_PD0621 2.4e-43 183.3 Desulfovibrionales Bacteria 1RGCV@1224,2M8Y3@213115,2WVBQ@28221,430WE@68525,COG2199@1,COG2199@2 NA|NA|NA T diguanylate cyclase HGDHCNMN_01775 497321.C664_15618 1.7e-123 449.1 Rhodocyclales 1.13.12.16 ko:K00459 ko00910,map00910 R00025 RC02541,RC02759 ko00000,ko00001,ko01000 Bacteria 1MU0U@1224,2KVKA@206389,2VH48@28216,COG2070@1,COG2070@2 NA|NA|NA S 2-nitropropane dioxygenase HGDHCNMN_01776 1000565.METUNv1_03446 1.9e-85 323.9 Rhodocyclales asmA ko:K07289 ko00000 Bacteria 1NVUY@1224,2KWW5@206389,2VI5J@28216,COG2982@1,COG2982@2 NA|NA|NA M AsmA family HGDHCNMN_01777 388051.AUFE01000059_gene6152 7e-115 421.8 Burkholderiaceae phoR_2 Bacteria 1K0N9@119060,1MUHS@1224,2VIGN@28216,COG0642@1,COG2205@2,COG4252@1,COG4252@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_01778 1442599.JAAN01000026_gene1304 1.1e-76 294.3 Xanthomonadales Bacteria 1NKA2@1224,1S1E7@1236,1X3DI@135614,COG1652@1,COG1652@2,COG4254@1,COG4254@2 NA|NA|NA S FecR protein HGDHCNMN_01779 76114.ebA2712 4.9e-51 207.2 Rhodocyclales mscL GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 ko:K03282 ko00000,ko02000 1.A.22.1 Bacteria 1RHG8@1224,2KWU9@206389,2VT9K@28216,COG1970@1,COG1970@2 NA|NA|NA M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell HGDHCNMN_01780 748247.AZKH_4480 4.9e-63 247.7 Rhodocyclales Bacteria 1RBJ1@1224,2KW4A@206389,2VMZX@28216,COG0745@1,COG0745@2 NA|NA|NA T Transcriptional regulatory protein, C terminal HGDHCNMN_01781 62928.azo3823 3.4e-96 357.8 Rhodocyclales ycbL GO:0003674,GO:0003824,GO:0004416,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019243,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0051596,GO:0061727,GO:0071704,GO:1901575,GO:1901615 3.1.2.6 ko:K01069 ko00620,map00620 R01736 RC00004,RC00137 ko00000,ko00001,ko01000 Bacteria 1MUDN@1224,2KV0X@206389,2VHMC@28216,COG0491@1,COG0491@2 NA|NA|NA S Metallo-beta-lactamase superfamily HGDHCNMN_01782 76114.ebA3326 9.3e-38 163.7 Rhodocyclales Bacteria 1RJVQ@1224,2DJFD@1,2KWUS@206389,2VTJS@28216,305YN@2 NA|NA|NA HGDHCNMN_01783 748247.AZKH_4349 1.2e-88 332.8 Rhodocyclales pyrE GO:0000287,GO:0003674,GO:0003824,GO:0004588,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10 ko:K00762 ko00240,ko01100,map00240,map01100 M00051 R01870 RC00611 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_2819,iECIAI39_1322.ECIAI39_4161,iEcSMS35_1347.EcSMS35_3977,iUTI89_1310.UTI89_C4186 Bacteria 1MW6F@1224,2KUYU@206389,2VH9U@28216,COG0461@1,COG0461@2 NA|NA|NA F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) HGDHCNMN_01784 159087.Daro_0123 1.4e-115 422.5 Rhodocyclales exoA 3.1.11.2 ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MVII@1224,2KV3I@206389,2VI74@28216,COG0708@1,COG0708@2 NA|NA|NA L Endonuclease/Exonuclease/phosphatase family HGDHCNMN_01785 62928.azo3667 2.4e-31 141.4 Rhodocyclales Bacteria 1N6X7@1224,2KX05@206389,2WFR8@28216,COG4575@1,COG4575@2 NA|NA|NA S Bacterial protein of unknown function (DUF883) HGDHCNMN_01786 76114.ebB101 2.8e-29 134.8 Rhodocyclales yqjE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1NDFU@1224,2KWJ8@206389,2VX3I@28216,COG5393@1,COG5393@2 NA|NA|NA S Putative Actinobacterial Holin-X, holin superfamily III HGDHCNMN_01787 76114.ebD74 7.7e-16 89.7 Rhodocyclales Bacteria 1NFIZ@1224,2C8GY@1,2KXBQ@206389,2VVXB@28216,3339N@2 NA|NA|NA S YqjK-like protein HGDHCNMN_01788 62928.azo3670 1.9e-79 302.0 Rhodocyclales hpt GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.8,6.3.4.19 ko:K00760,ko:K15780 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000,ko03016 Bacteria 1NRT8@1224,2KVMU@206389,2VRM9@28216,COG0634@1,COG0634@2 NA|NA|NA F phosphoribosyltransferase HGDHCNMN_01789 748247.AZKH_1544 2.5e-37 161.8 Rhodocyclales petP Bacteria 1RIX7@1224,2KX57@206389,2VUFV@28216,COG1846@1,COG1846@2 NA|NA|NA K helix_turn_helix multiple antibiotic resistance protein HGDHCNMN_01790 497321.C664_06238 1.6e-139 502.7 Rhodocyclales lysN ko:K05825 ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210 R01939 RC00006 ko00000,ko00001,ko01000 Bacteria 1MV6F@1224,2KVS3@206389,2VHE6@28216,COG1167@1,COG1167@2 NA|NA|NA EK COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs HGDHCNMN_01791 1454004.AW11_00516 4.3e-75 288.1 Betaproteobacteria fumC GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0050896,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 M00009,M00011,M00173,M00376 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUQI@1224,2VHA5@28216,COG0114@1,COG0114@2 NA|NA|NA C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate HGDHCNMN_01792 1123393.KB891333_gene2563 1e-152 546.6 Hydrogenophilales ko:K03088 ko00000,ko03021 Bacteria 1KSA9@119069,1MU3D@1224,2VKYD@28216,COG4941@1,COG4941@2 NA|NA|NA K Sigma-70, region 4 HGDHCNMN_01793 1123393.KB891333_gene2560 1.5e-41 175.6 Hydrogenophilales gloA5 3.6.3.21 ko:K02028,ko:K07032 M00236 ko00000,ko00002,ko01000,ko02000 3.A.1.3 Bacteria 1KT7M@119069,1RH1T@1224,2VSCM@28216,COG3607@1,COG3607@2 NA|NA|NA S Glyoxalase-like domain HGDHCNMN_01794 1095769.CAHF01000010_gene1111 3.1e-43 181.0 Oxalobacteraceae Bacteria 1RHWZ@1224,2VSQ1@28216,477AF@75682,COG3791@1,COG3791@2 NA|NA|NA S Glutathione-dependent formaldehyde-activating enzyme HGDHCNMN_01795 153948.NAL212_1339 2.2e-34 152.9 Nitrosomonadales ko:K06996 ko00000 Bacteria 1N7Q5@1224,2VT7E@28216,373CD@32003,COG3324@1,COG3324@2 NA|NA|NA C glyoxalase bleomycin resistance protein dioxygenase HGDHCNMN_01796 1123392.AQWL01000005_gene3019 7.5e-32 143.3 Hydrogenophilales Bacteria 1KTAT@119069,1N2T1@1224,2VUKT@28216,COG3795@1,COG3795@2 NA|NA|NA S YCII-related domain HGDHCNMN_01797 522306.CAP2UW1_0603 7e-59 233.4 Betaproteobacteria phnB Bacteria 1RF5T@1224,2VS3X@28216,COG2764@1,COG2764@2 NA|NA|NA S glyoxalase bleomycin resistance protein dioxygenase HGDHCNMN_01798 1123393.KB891333_gene2557 1.4e-50 205.7 Hydrogenophilales Bacteria 1KT8W@119069,1RCZT@1224,2VSH3@28216,COG3795@1,COG3795@2 NA|NA|NA S YCII-related domain HGDHCNMN_01800 159087.Daro_2836 2.7e-174 618.2 Rhodocyclales lolC GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008104,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0034613,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0098796,GO:0098797,GO:1990778 ko:K02004,ko:K09808 ko02010,map02010 M00255,M00258 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.125 Bacteria 1MVV7@1224,2KVIV@206389,2VH7C@28216,COG4591@1,COG4591@2 NA|NA|NA M lipoprotein releasing system, transmembrane protein, LolC E family HGDHCNMN_01801 76114.ebA5820 4.8e-88 330.9 Rhodocyclales lolD GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006807,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0015031,GO:0015399,GO:0015405,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0022804,GO:0022857,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042157,GO:0042160,GO:0042623,GO:0042626,GO:0042886,GO:0042953,GO:0043167,GO:0043168,GO:0043170,GO:0043190,GO:0043492,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0045184,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1902495,GO:1904949,GO:1990351,GO:1990778 ko:K09810 ko02010,map02010 M00255 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.125 Bacteria 1MVSQ@1224,2KUEU@206389,2VHAQ@28216,COG1136@1,COG1136@2 NA|NA|NA V Part of the ABC transporter complex LolCDE involved in the translocation of HGDHCNMN_01802 62928.azo2270 2.8e-120 439.5 Rhodocyclales ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2KVKM@206389,2VJA5@28216,COG0840@1,COG0840@2 NA|NA|NA NT Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). HGDHCNMN_01803 748247.AZKH_3357 5e-119 434.5 Rhodocyclales kch ko:K10716 ko00000,ko02000 1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6 Bacteria 1MU1R@1224,2KUP5@206389,2WEJI@28216,COG1226@1,COG1226@2 NA|NA|NA P Ion channel HGDHCNMN_01804 1123367.C666_17470 1.3e-61 242.7 Rhodocyclales TLL0138 ko:K09928 ko00000 Bacteria 1RGV6@1224,2KW1R@206389,2VSHR@28216,COG3216@1,COG3216@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_01805 76114.ebA5822 6.6e-214 750.7 Rhodocyclales ycaI GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02238 M00429 ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 Bacteria 1MUKF@1224,2KVQM@206389,2VHKP@28216,COG0658@1,COG0658@2,COG2333@1,COG2333@2 NA|NA|NA S DNA internalization-related competence protein ComEC Rec2 HGDHCNMN_01806 62928.azo1513 2.3e-120 438.7 Rhodocyclales Bacteria 1NTH9@1224,2KZNU@206389,2WGMM@28216,COG2267@1,COG2267@2 NA|NA|NA I Alpha/beta hydrolase family HGDHCNMN_01807 748247.AZKH_2035 8.2e-80 303.5 Rhodocyclales Bacteria 1RDXR@1224,2KW9C@206389,2VKFZ@28216,COG3821@1,COG3821@2 NA|NA|NA S Protein of unknown function, DUF599 HGDHCNMN_01808 76114.ebA5827 2.7e-59 234.6 Rhodocyclales msrB 1.8.4.12 ko:K07305 ko00000,ko01000 Bacteria 1RGWC@1224,2KWDK@206389,2VSHQ@28216,COG0229@1,COG0229@2 NA|NA|NA C Belongs to the MsrB Met sulfoxide reductase family HGDHCNMN_01809 62928.azo2169 3.3e-153 548.1 Rhodocyclales Bacteria 1N0SC@1224,28I8W@1,2KVDQ@206389,2VK0J@28216,2Z8BP@2 NA|NA|NA S Protein of unknown function (DUF2863) HGDHCNMN_01810 62928.azo2168 3.9e-112 411.4 Rhodocyclales ydiA GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0030234,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0098772 2.7.11.33,2.7.4.28 ko:K09773 ko00000,ko01000 Bacteria 1MUHU@1224,2KVFV@206389,2VI4R@28216,COG1806@1,COG1806@2 NA|NA|NA F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation HGDHCNMN_01811 76114.ebA188 3.2e-195 688.3 Rhodocyclales norD ko:K02448 R00294 RC02794 ko00000 3.D.4.10 Bacteria 1MVBZ@1224,2KUMB@206389,2VJJW@28216,COG4548@1,COG4548@2 NA|NA|NA P Von Willebrand factor type A HGDHCNMN_01812 78245.Xaut_1887 6.5e-11 72.8 Xanthobacteraceae Bacteria 1MU5Y@1224,2TRNQ@28211,3EYUK@335928,COG1028@1,COG1028@2 NA|NA|NA IQ Enoyl-(Acyl carrier protein) reductase HGDHCNMN_01814 748247.AZKH_4323 8.4e-41 173.3 Rhodocyclales recX ko:K03565 ko00000,ko03400 Bacteria 1N6P6@1224,2KXFY@206389,2VTYZ@28216,COG2137@1,COG2137@2 NA|NA|NA S Modulates RecA activity HGDHCNMN_01815 76114.ebA3394 4.7e-110 404.1 Rhodocyclales lptB ko:K01990,ko:K06861 ko02010,map02010 M00254,M00320 ko00000,ko00001,ko00002,ko01000,ko02000 1.B.42.1,3.A.1 Bacteria 1MU8M@1224,2KUNS@206389,2VH29@28216,COG1137@1,COG1137@2 NA|NA|NA S ABC-type (Unclassified) transport system, ATPase component HGDHCNMN_01816 748247.AZKH_4325 5.6e-171 607.4 Rhodocyclales rpoN GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 ko:K03092 ko02020,ko05111,map02020,map05111 ko00000,ko00001,ko03021 Bacteria 1MW4V@1224,2KV3Q@206389,2VIEV@28216,COG1508@1,COG1508@2 NA|NA|NA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released HGDHCNMN_01817 76114.ebB108 2.4e-42 177.9 Rhodocyclales hpf GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1990904,GO:2000112,GO:2000113 ko:K05808 ko00000,ko03009 Bacteria 1MZHW@1224,2KWTT@206389,2VU5H@28216,COG1544@1,COG1544@2 NA|NA|NA J sigma 54 modulation protein HGDHCNMN_01818 76114.ebA3391 5.3e-65 253.8 Rhodocyclales ptsN GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044424,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563 2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02806 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 M00273 R03232 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.2.1 Bacteria 1RD0E@1224,2KW4R@206389,2VRDH@28216,COG1762@1,COG1762@2 NA|NA|NA G COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) HGDHCNMN_01819 76114.ebA3390 1.8e-122 445.7 Rhodocyclales hprK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06023 ko00000,ko01000 Bacteria 1NNN5@1224,2KVU0@206389,2VJCH@28216,COG1493@1,COG1493@2 NA|NA|NA F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) HGDHCNMN_01820 1144319.PMI16_01173 9.6e-09 66.2 Oxalobacteraceae psiF Bacteria 1N7N3@1224,2E4IS@1,2VVSI@28216,32ZDU@2,474ZP@75682 NA|NA|NA S psiF repeat HGDHCNMN_01821 748247.AZKH_4342 2.2e-42 179.5 Rhodocyclales 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 Bacteria 1NAJG@1224,2KWIW@206389,2VJW8@28216,COG1716@1,COG1716@2,COG2114@1,COG2114@2 NA|NA|NA T Forkhead associated domain HGDHCNMN_01822 62928.azo0485 9.4e-127 459.9 Rhodocyclales ttcA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0016783,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 6.3.4.19 ko:K04075,ko:K14058 R09597 RC02633,RC02634 ko00000,ko01000,ko03016 Bacteria 1MW5Q@1224,2KU6Q@206389,2VHWH@28216,COG0037@1,COG0037@2 NA|NA|NA J Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system HGDHCNMN_01823 748247.AZKH_4339 6.2e-97 360.5 Rhodocyclales Bacteria 1MUUV@1224,2KUA7@206389,2VK0U@28216,COG1028@1,COG1028@2 NA|NA|NA IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) HGDHCNMN_01824 748247.AZKH_4338 1.2e-174 619.4 Rhodocyclales Bacteria 1N3CJ@1224,2KUAS@206389,2VHBE@28216,COG1565@1,COG1565@2 NA|NA|NA S Putative S-adenosyl-L-methionine-dependent methyltransferase HGDHCNMN_01826 85643.Tmz1t_0698 4.3e-104 384.4 Rhodocyclales 1.11.1.10 ko:K00433,ko:K07124 ko00000,ko01000 Bacteria 1QVBZ@1224,2KUFT@206389,2VNI1@28216,COG2267@1,COG2267@2 NA|NA|NA I Alpha beta hydrolase HGDHCNMN_01827 1123393.KB891331_gene2857 5.5e-30 138.3 Hydrogenophilales Bacteria 1KTEU@119069,1NF4W@1224,2WCCB@28216,COG4625@1,COG4625@2 NA|NA|NA S PEP-CTERM motif HGDHCNMN_01828 1348657.M622_00670 4.3e-10 70.1 Rhodocyclales Bacteria 1PVA1@1224,2AF9M@1,2KXN8@206389,2WB6F@28216,3158S@2 NA|NA|NA S Protein of unknown function (DUF2905) HGDHCNMN_01829 1123487.KB892834_gene2837 2.7e-118 433.0 Rhodocyclales pbpC 2.4.1.129 ko:K05367 ko00550,map00550 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 1MUA9@1224,2KVV8@206389,2VMGW@28216,COG4953@1,COG4953@2 NA|NA|NA M Transglycosylase HGDHCNMN_01830 62928.azo0493 6.6e-160 570.5 Rhodocyclales cca 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 Bacteria 1MU2X@1224,2KUCQ@206389,2VIN5@28216,COG0617@1,COG0617@2 NA|NA|NA J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases HGDHCNMN_01831 85643.Tmz1t_0701 1.2e-108 399.8 Rhodocyclales 1.6.5.3,1.6.99.3 ko:K00329,ko:K00356 ko00190,map00190 R11945 RC00061 ko00000,ko00001,ko01000 Bacteria 1MW54@1224,2KUXF@206389,2VIBZ@28216,COG0702@1,COG0702@2 NA|NA|NA GM epimerase dehydratase HGDHCNMN_01832 748247.AZKH_4331 1.8e-191 676.0 Rhodocyclales slt GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009274,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 ko:K08309 ko00000,ko01000,ko01011 GH23 iETEC_1333.ETEC_4747,iPC815.YPO0452 Bacteria 1MV3F@1224,2KU8J@206389,2VHPK@28216,COG0741@1,COG0741@2 NA|NA|NA M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) HGDHCNMN_01833 62928.azo0497 3.7e-55 221.5 Rhodocyclales ygfA GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 ko:K01934 ko00670,ko01100,map00670,map01100 R02301 RC00183 ko00000,ko00001,ko01000 iECABU_c1320.ECABU_c31940,iECOK1_1307.ECOK1_3298,iECSF_1327.ECSF_2705,iUTI89_1310.UTI89_C3298 Bacteria 1MZG0@1224,2KWQ6@206389,2VJZE@28216,COG0212@1,COG0212@2 NA|NA|NA H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family HGDHCNMN_01834 1000565.METUNv1_03707 4e-240 837.4 Betaproteobacteria xylR ko:K02481 ko00000,ko02022 Bacteria 1MU0N@1224,2WH2X@28216,COG2204@1,COG2204@2 NA|NA|NA K V4R HGDHCNMN_01835 420662.Mpe_A1003 9.9e-95 353.6 unclassified Burkholderiales vanB ko:K03863 ko00627,ko01120,map00627,map01120 R05274 RC00392,RC01533 ko00000,ko00001 Bacteria 1KKC3@119065,1MU6E@1224,2VK6Y@28216,COG1018@1,COG1018@2 NA|NA|NA C 2Fe-2S iron-sulfur cluster binding domain HGDHCNMN_01836 420662.Mpe_A1001 2.4e-147 528.5 unclassified Burkholderiales 1.14.15.23 ko:K22325 ko00000,ko01000 Bacteria 1KMX6@119065,1MV2G@1224,2VMFV@28216,COG4638@1,COG4638@2 NA|NA|NA H Rieske [2Fe-2S] domain HGDHCNMN_01837 305700.B447_05625 8.8e-130 469.9 Rhodocyclales oxyR ko:K04761 ko02026,map02026 ko00000,ko00001,ko03000 Bacteria 1MVA1@1224,2KVAT@206389,2VIBJ@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_01838 748247.AZKH_0046 1.2e-176 626.3 Rhodocyclales mucD 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1MU63@1224,2KVHE@206389,2VI4Q@28216,COG0265@1,COG0265@2 NA|NA|NA O Belongs to the peptidase S1C family HGDHCNMN_01839 748247.AZKH_4379 3.7e-197 694.9 Rhodocyclales ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1MUC1@1224,2KW6S@206389,2VH4X@28216,COG1629@1,COG4771@2 NA|NA|NA P COG1629 Outer membrane receptor proteins, mostly Fe transport HGDHCNMN_01840 1000565.METUNv1_03426 9.4e-34 149.4 Rhodocyclales ko:K04751,ko:K04752 ko02020,map02020 ko00000,ko00001 Bacteria 1N32M@1224,2KWXV@206389,2VUEY@28216,COG0347@1,COG0347@2 NA|NA|NA K Nitrogen regulatory protein P-II HGDHCNMN_01841 640081.Dsui_0896 0.0 1580.1 Rhodocyclales ko:K07787,ko:K15726 ko02020,map02020 ko00000,ko00001,ko02000 2.A.6.1.2,2.A.6.1.4 Bacteria 1NUIV@1224,2KVY9@206389,2VHCZ@28216,COG3696@1,COG3696@2 NA|NA|NA P AcrB/AcrD/AcrF family HGDHCNMN_01842 1000565.METUNv1_03424 6.1e-118 431.0 Rhodocyclales cusB ko:K15727 ko00000,ko02000 8.A.1.2.1 Bacteria 1MVAS@1224,2KV6K@206389,2VN6Q@28216,COG0845@1,COG0845@2 NA|NA|NA M Biotin-lipoyl like HGDHCNMN_01843 1000565.METUNv1_03423 1.1e-106 393.7 Rhodocyclales cusC ko:K15725 ko00000,ko02000 1.B.17.2.2 Bacteria 1R6S1@1224,2KV9S@206389,2VMHP@28216,COG1538@1,COG1538@2 NA|NA|NA MU Outer membrane efflux protein HGDHCNMN_01845 76114.ebA3044 4.4e-139 501.1 Rhodocyclales dacC 3.4.16.4 ko:K01286,ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria 1MUU7@1224,2KVFQ@206389,2VH46@28216,COG1686@1,COG1686@2 NA|NA|NA M Belongs to the peptidase S11 family HGDHCNMN_01846 1123487.KB892834_gene2779 3.8e-33 147.1 Rhodocyclales ybeD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K09158 ko00000 Bacteria 1RGV5@1224,2KWZM@206389,2VTY5@28216,COG2921@1,COG2921@2 NA|NA|NA S Belongs to the UPF0250 family HGDHCNMN_01847 748247.AZKH_0141 1.3e-84 319.3 Rhodocyclales lipB GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019752,GO:0032787,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048519,GO:0050789,GO:0051186,GO:0051188,GO:0051604,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.181 ko:K03801 ko00785,ko01100,map00785,map01100 R07766,R07769 RC00039,RC00992,RC02867 ko00000,ko00001,ko01000 iECSF_1327.ECSF_0569,iSFV_1184.SFV_0696,iSFxv_1172.SFxv_0718 Bacteria 1MU6A@1224,2KW5V@206389,2VQ1Y@28216,COG0321@1,COG0321@2 NA|NA|NA H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate HGDHCNMN_01848 497321.C664_14014 1.5e-172 612.1 Rhodocyclales lipA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 ko:K03644 ko00785,ko01100,map00785,map01100 R07767,R07768 RC01978 ko00000,ko00001,ko01000 Bacteria 1MVRD@1224,2KVI9@206389,2VIFE@28216,COG0320@1,COG0320@2 NA|NA|NA H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives HGDHCNMN_01849 627192.SLG_23310 1.3e-64 252.7 Sphingomonadales btuE GO:0003674,GO:0003824,GO:0004601,GO:0004602,GO:0005575,GO:0005623,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0033194,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 1.11.1.9 ko:K00432 ko00480,ko00590,ko04918,map00480,map00590,map04918 R00274,R07034,R07035 RC00011,RC00982 ko00000,ko00001,ko01000 Bacteria 1RD1R@1224,2K47B@204457,2U7R3@28211,COG0386@1,COG0386@2 NA|NA|NA O Belongs to the glutathione peroxidase family HGDHCNMN_01850 159087.Daro_0106 3.7e-147 528.1 Rhodocyclales rsbP 3.1.3.3,4.6.1.1 ko:K01768,ko:K07315 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko03021 Bacteria 1N4K5@1224,2KVU6@206389,2VKGP@28216,COG2208@1,COG2208@2,COG3829@1,COG3829@2 NA|NA|NA T Sigma factor PP2C-like phosphatases HGDHCNMN_01851 76114.ebA2214 1.3e-55 223.4 Rhodocyclales Bacteria 1RK4D@1224,2C5U9@1,2KVF8@206389,2VKK4@28216,318BZ@2 NA|NA|NA S Bacterial protein of unknown function (Gcw_chp) HGDHCNMN_01852 78245.Xaut_3183 1.5e-244 852.0 Alphaproteobacteria Bacteria 1MY59@1224,2TU3D@28211,COG0531@1,COG0531@2 NA|NA|NA E amino acid HGDHCNMN_01853 395495.Lcho_0170 5.2e-51 207.6 Betaproteobacteria 1.14.13.238 ko:K22344 ko00000,ko01000 Bacteria 1N0PJ@1224,28IUB@1,2VUS4@28216,2Z8T2@2 NA|NA|NA HGDHCNMN_01854 395495.Lcho_0171 6.4e-123 447.2 unclassified Burkholderiales yeaX 1.14.13.238 ko:K22343 ko00000,ko01000 Bacteria 1KKC3@119065,1MU6E@1224,2VK6Y@28216,COG1018@1,COG1018@2 NA|NA|NA C 2Fe-2S iron-sulfur cluster binding domain HGDHCNMN_01855 395495.Lcho_0172 4.6e-178 630.6 unclassified Burkholderiales 1.14.13.238 ko:K22342 ko00000,ko01000 Bacteria 1KMUS@119065,1PJFC@1224,2BUI6@1,2VSBG@28216,32PUF@2 NA|NA|NA S Protein of unknown function (DUF3445) HGDHCNMN_01856 1131814.JAFO01000001_gene1362 7.1e-208 729.9 Alphaproteobacteria Bacteria 1R5A6@1224,2U0HW@28211,COG1960@1,COG1960@2 NA|NA|NA I Acyl-CoA dehydrogenase, C-terminal domain HGDHCNMN_01857 196490.AUEZ01000002_gene4185 4.2e-39 167.9 Bradyrhizobiaceae ntaB ko:K16048 ko00984,ko01100,map00984,map01100 R09819 RC00236 ko00000,ko00001,ko01000 Bacteria 1RGYM@1224,2UCHI@28211,3JV3M@41294,COG1853@1,COG1853@2 NA|NA|NA S Flavin reductase like domain HGDHCNMN_01858 1131814.JAFO01000001_gene1360 1.8e-241 842.0 Xanthobacteraceae 2.1.2.10 ko:K00605,ko:K09967 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R01221,R02300,R04125 RC00022,RC00069,RC00183,RC02834 ko00000,ko00001,ko00002,ko01000 Bacteria 1R3WG@1224,2TVX2@28211,3F0EK@335928,COG0404@1,COG0404@2,COG3665@1,COG3665@2 NA|NA|NA E Domain of unknown function (DUF1989) HGDHCNMN_01860 358220.C380_02895 1.5e-65 255.8 Comamonadaceae Bacteria 1RAH8@1224,2DP2V@1,2VQNV@28216,330AH@2,4ADGB@80864 NA|NA|NA S Protein of unknown function (DUF3455) HGDHCNMN_01861 1218084.BBJK01000021_gene2209 4.7e-95 355.5 Betaproteobacteria Bacteria 1QXB5@1224,2VZW3@28216,COG2202@1,COG2202@2 NA|NA|NA T PAS fold HGDHCNMN_01862 159450.NH14_09330 1.2e-70 274.2 Burkholderiaceae 2.7.13.3 ko:K07673 ko02020,map02020 M00471 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1K2VF@119060,1MWZT@1224,2VIFM@28216,COG3850@1,COG3850@2 NA|NA|NA T Histidine kinase HGDHCNMN_01863 582744.Msip34_2464 4.3e-49 201.4 Nitrosomonadales narL GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0090352,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903314,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K07684 ko02020,map02020 M00471 ko00000,ko00001,ko00002,ko02022 Bacteria 1NQH7@1224,2KP4A@206350,2VP8T@28216,COG2197@1,COG2197@2 NA|NA|NA K Winged helix-turn-helix DNA-binding HGDHCNMN_01864 1286631.X805_27010 6e-187 660.2 unclassified Burkholderiales ko:K06921 ko00000 Bacteria 1KMUM@119065,1R8WG@1224,2VQHA@28216,COG1672@1,COG1672@2 NA|NA|NA S PFAM Archaeal ATPase HGDHCNMN_01867 395495.Lcho_0173 5.1e-196 690.3 Betaproteobacteria 2.1.2.10 ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R01221,R02300,R04125 RC00022,RC00069,RC00183,RC02834 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV96@1224,2VIT9@28216,COG0404@1,COG0404@2 NA|NA|NA E The glycine cleavage system catalyzes the degradation of glycine HGDHCNMN_01869 759362.KVU_2564 4.5e-41 174.1 Alphaproteobacteria manX 2.7.1.191,2.7.1.194 ko:K02793,ko:K02794,ko:K02821 ko00051,ko00053,ko00520,ko01100,ko01120,ko02060,map00051,map00053,map00520,map01100,map01120,map02060 M00276,M00283,M00550 R02630,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1,4.A.7.1 Bacteria 1RHH7@1224,2U9E5@28211,COG2893@1,COG2893@2 NA|NA|NA G Phosphotransferase system mannose fructose-specific component IIA HGDHCNMN_01870 1122180.Lokhon_01376 1.2e-97 363.2 Loktanella rapZ GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 ko:K06958 ko00000,ko03019 Bacteria 1MVX6@1224,2P7XM@245186,2TTI4@28211,COG1660@1,COG1660@2 NA|NA|NA S Displays ATPase and GTPase activities HGDHCNMN_01871 272942.RCAP_rcc02834 9.5e-26 123.2 Rhodobacter hprK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06023 ko00000,ko01000 Bacteria 1FBZV@1060,1NNN5@1224,2UFPB@28211,COG1493@1,COG1493@2 NA|NA|NA H HPr Serine kinase C-terminal domain HGDHCNMN_01872 748247.AZKH_3548 8.6e-238 829.3 Rhodocyclales nirS GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1,1.7.99.1 ko:K15864 ko00910,ko01120,map00910,map01120 M00529 R00143,R00783,R00785 RC00086,RC02797 ko00000,ko00001,ko00002,ko01000 Bacteria 1N3PN@1224,2KVT2@206389,2VHSF@28216,COG2010@1,COG2010@2 NA|NA|NA C Cytochrome D1 heme domain HGDHCNMN_01873 1538295.JY96_19635 2.3e-29 134.8 unclassified Burkholderiales ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 Bacteria 1KNZU@119065,1N6UN@1224,2VW1Y@28216,COG4654@1,COG4654@2 NA|NA|NA C Cytochrome c HGDHCNMN_01874 497321.C664_19778 3.4e-74 284.6 Rhodocyclales yigZ 2.1.1.45,3.4.13.9 ko:K00560,ko:K01271 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 M00053 R02101 RC00219,RC00332 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1NFJC@1224,2KW4P@206389,2VKTT@28216,COG1739@1,COG1739@2 NA|NA|NA S Domain of unknown function (DUF1949) HGDHCNMN_01875 1454004.AW11_03210 2e-29 135.2 Betaproteobacteria nirC GO:0005575,GO:0005623,GO:0042597,GO:0044464 ko:K19344 ko00000 Bacteria 1N73U@1224,2VTXS@28216,COG2010@1,COG2010@2 NA|NA|NA C Cytochrome C oxidase, cbb3-type, subunit III HGDHCNMN_01876 1454004.AW11_03018 3.9e-162 577.8 Betaproteobacteria nirF GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 ko:K19345 ko00000 Bacteria 1QD5Q@1224,2VH1W@28216,COG3391@1,COG3391@2 NA|NA|NA S cytochrome d1, heme region HGDHCNMN_01877 640081.Dsui_1930 9.4e-88 330.5 Rhodocyclales nirD Bacteria 1NVYY@1224,2KUR4@206389,2VHP8@28216,COG1522@1,COG1522@2 NA|NA|NA K COG1522 Transcriptional regulators HGDHCNMN_01878 159087.Daro_3268 1.6e-53 215.7 Rhodocyclales nirG Bacteria 1RIKY@1224,2KWF6@206389,2VSBM@28216,COG1522@1,COG1522@2 NA|NA|NA K overlaps another CDS with the same product name HGDHCNMN_01879 1454004.AW11_03021 1.7e-58 232.3 Betaproteobacteria nirH Bacteria 1RCY6@1224,2VR9X@28216,COG1522@1,COG1522@2 NA|NA|NA K transcriptional regulator AsnC family HGDHCNMN_01880 1175306.GWL_40880 2.2e-42 177.9 Oxalobacteraceae urtA ko:K01999,ko:K11959 ko02010,ko02024,map02010,map02024 M00237,M00323 ko00000,ko00001,ko00002,ko02000 3.A.1.4,3.A.1.4.4,3.A.1.4.5 iJN678.amiC Bacteria 1MU8V@1224,2VI6J@28216,475IT@75682,COG0683@1,COG0683@2 NA|NA|NA E Periplasmic binding protein domain HGDHCNMN_01881 522306.CAP2UW1_1191 5.8e-185 654.1 unclassified Betaproteobacteria urtB ko:K11960 ko02010,map02010 M00323 ko00000,ko00001,ko00002,ko02000 3.A.1.4.4,3.A.1.4.5 Bacteria 1KQA6@119066,1MVND@1224,2VJ7X@28216,COG0559@1,COG0559@2 NA|NA|NA U Branched-chain amino acid transport system / permease component HGDHCNMN_01882 62928.azo0676 3.3e-164 584.7 Rhodocyclales urtC ko:K11960,ko:K11961 ko02010,map02010 M00323 ko00000,ko00001,ko00002,ko02000 3.A.1.4.4,3.A.1.4.5 Bacteria 1MUPI@1224,2KURG@206389,2VHZA@28216,COG4177@1,COG4177@2 NA|NA|NA E Belongs to the binding-protein-dependent transport system permease family HGDHCNMN_01884 62928.azo3115 1.1e-196 692.6 Rhodocyclales lysC GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3,2.7.2.4 ko:K00928,ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480,R01773,R01775 RC00002,RC00043,RC00087 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW3H@1224,2KUEA@206389,2VINP@28216,COG0527@1,COG0527@2 NA|NA|NA E Belongs to the aspartokinase family HGDHCNMN_01885 305700.B447_01411 1.1e-41 175.6 Rhodocyclales Bacteria 1N48U@1224,2KWYQ@206389,2VUHQ@28216,COG2944@1,COG2944@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_01886 497321.C664_05061 2.4e-95 355.5 Rhodocyclales Bacteria 1QG36@1224,2KVBZ@206389,2VK7Z@28216,COG0731@1,COG0731@2 NA|NA|NA C Radical SAM HGDHCNMN_01887 748247.AZKH_3491 7.1e-64 250.0 Rhodocyclales queD 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 1RETG@1224,2KW9I@206389,2VRBN@28216,COG0720@1,COG0720@2 NA|NA|NA H synthase HGDHCNMN_01888 388051.AUFE01000001_gene1963 1.3e-85 322.8 Burkholderiaceae nagK 3.7.1.20 ko:K16165 ko00350,ko01100,ko01120,map00350,map01100,map01120 R01085 RC00326,RC00446 ko00000,ko00001,ko01000 Bacteria 1K027@119060,1MVFA@1224,2VHG8@28216,COG0179@1,COG0179@2 NA|NA|NA Q fumarylacetoacetate (FAA) hydrolase HGDHCNMN_01889 497321.C664_13322 1e-91 342.8 Rhodocyclales pfpI 3.5.1.124 ko:K05520 ko00000,ko01000,ko01002 Bacteria 1MY0C@1224,2KV2H@206389,2VM0T@28216,COG0693@1,COG0693@2 NA|NA|NA S DJ-1/PfpI family HGDHCNMN_01890 497321.C664_13327 4.2e-35 154.1 Rhodocyclales Bacteria 1MZP2@1224,2KXED@206389,2VU7X@28216,COG4321@1,COG4321@2 NA|NA|NA S Ribbon-helix-helix domain HGDHCNMN_01891 460265.Mnod_1653 3.2e-103 381.3 Methylobacteriaceae ko:K11209 ko00000,ko01000 Bacteria 1JSF7@119045,1MUN3@1224,2TTVR@28211,COG0625@1,COG0625@2 NA|NA|NA O Belongs to the GST superfamily HGDHCNMN_01892 76114.ebA5738 1.3e-246 859.0 Rhodocyclales deaD GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003727,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009266,GO:0009314,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010468,GO:0010501,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030312,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0032268,GO:0032270,GO:0033554,GO:0033592,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034655,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043170,GO:0043487,GO:0043488,GO:0043489,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045934,GO:0046483,GO:0046700,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070035,GO:0070417,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097617,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902369,GO:1902373,GO:1903311,GO:1903312,GO:2000112 3.6.4.13 ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 1MU49@1224,2KVJ3@206389,2VH16@28216,COG0513@1,COG0513@2 NA|NA|NA JKL DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation HGDHCNMN_01893 1123487.KB892844_gene827 3.5e-69 268.1 Rhodocyclales MA20_27875 ko:K02039,ko:K07220 ko00000 Bacteria 1R4SP@1224,2KW8U@206389,2VKF1@28216,COG1392@1,COG1392@2 NA|NA|NA P Protein of unknown function DUF47 HGDHCNMN_01894 748247.AZKH_0786 2.5e-149 535.0 Rhodocyclales pit ko:K03306 ko00000 2.A.20 Bacteria 1MVXK@1224,2KVRY@206389,2VI71@28216,COG0306@1,COG0306@2 NA|NA|NA P Phosphate transporter family HGDHCNMN_01895 1123367.C666_17435 1.8e-13 81.6 Rhodocyclales Bacteria 1NIEN@1224,2EUM2@1,2KXJ2@206389,2VZ1K@28216,33N2X@2 NA|NA|NA HGDHCNMN_01896 1454004.AW11_00101 5.4e-125 454.5 Betaproteobacteria yaiW GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009279,GO:0010033,GO:0010243,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031240,GO:0031975,GO:0042221,GO:0044424,GO:0044425,GO:0044444,GO:0044462,GO:0044464,GO:0050896,GO:0071944,GO:0098552,GO:1901652,GO:1901698,GO:1901700 Bacteria 1MVDT@1224,28HWK@1,2VM8W@28216,2Z82H@2 NA|NA|NA S Protein of unknown function (DUF1615) HGDHCNMN_01897 159087.Daro_0283 2e-196 691.8 Rhodocyclales 2.8.3.18 ko:K18118 ko00020,ko00620,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00650,map01100,map01110,map01120,map01130,map01200 M00009,M00011 R10343 RC00012,RC00014 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_3304 Bacteria 1MUGE@1224,2KUN6@206389,2VIF1@28216,COG0427@1,COG0427@2 NA|NA|NA C acetyl-CoA hydrolase HGDHCNMN_01898 279714.FuraDRAFT_2501 5.9e-104 384.0 Neisseriales rlmJ GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.266 ko:K07115 ko00000,ko01000,ko03009 Bacteria 1MWGA@1224,2KPWB@206351,2VHM4@28216,COG2961@1,COG2961@2 NA|NA|NA H Specifically methylates the adenine in position 2030 of 23S rRNA HGDHCNMN_01899 159087.Daro_2737 1e-36 159.5 Rhodocyclales Bacteria 1N02D@1224,2KX40@206389,2VU39@28216,COG1694@1,COG1694@2 NA|NA|NA S MazG-like family HGDHCNMN_01900 748247.AZKH_2065 3.9e-50 204.5 Rhodocyclales yrdA ko:K02617 ko00000 Bacteria 1RD76@1224,2KW50@206389,2VR65@28216,COG0663@1,COG0663@2 NA|NA|NA S COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily HGDHCNMN_01901 1123367.C666_03065 9.5e-94 350.1 Rhodocyclales Bacteria 1R99W@1224,2KUNI@206389,2VPVB@28216,COG3568@1,COG3568@2 NA|NA|NA L Endonuclease Exonuclease phosphatase HGDHCNMN_01902 62928.azo1417 4.1e-65 255.0 Rhodocyclales Bacteria 1RCW6@1224,2KWDG@206389,2VRK0@28216,COG1639@1,COG1639@2 NA|NA|NA T HDOD domain HGDHCNMN_01903 522306.CAP2UW1_0857 2.6e-166 592.4 Betaproteobacteria Bacteria 1MZ5X@1224,2VX6D@28216,COG5360@1,COG5360@2 NA|NA|NA S Heparinase II HGDHCNMN_01904 243277.VC_0924 5.4e-86 325.1 Vibrionales 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 R02539 RC00004,RC00014 ko00000,ko00001,ko01000 Bacteria 1RFV4@1224,1S519@1236,1XUMD@135623,COG1541@1,COG1541@2 NA|NA|NA H COG1541 Coenzyme F390 synthetase HGDHCNMN_01905 29581.BW37_02127 1.1e-62 247.3 Oxalobacteraceae ko:K20922 ko05111,map05111 ko00000,ko00001,ko01003 GT4 Bacteria 1MVKK@1224,2W92G@28216,476A2@75682,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferases group 1 HGDHCNMN_01906 1403819.BATR01000052_gene1569 1.5e-46 194.1 Verrucomicrobia 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 R02539 RC00004,RC00014 ko00000,ko00001,ko01000 Bacteria 46WQ5@74201,COG1541@1,COG1541@2 NA|NA|NA H Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) HGDHCNMN_01907 1403819.BATR01000052_gene1569 1.1e-49 204.5 Verrucomicrobia 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 R02539 RC00004,RC00014 ko00000,ko00001,ko01000 Bacteria 46WQ5@74201,COG1541@1,COG1541@2 NA|NA|NA H Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) HGDHCNMN_01908 1288494.EBAPG3_29550 1.3e-104 386.0 Nitrosomonadales tagA 2.4.1.187 ko:K05946 ko05111,map05111 ko00000,ko00001,ko01000,ko01003 GT26 Bacteria 1N1HD@1224,2VPIW@28216,373F2@32003,COG1922@1,COG1922@2 NA|NA|NA M Glycosyl transferase WecB/TagA/CpsF family HGDHCNMN_01909 426355.Mrad2831_4190 8.3e-54 218.4 Methylobacteriaceae fmt GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 ko:K00604 ko00670,ko00970,map00670,map00970 R03940 RC00026,RC00165 ko00000,ko00001,ko01000 iSFV_1184.SFV_2325 Bacteria 1JTGC@119045,1NN5V@1224,2TTHZ@28211,COG0223@1,COG0223@2 NA|NA|NA J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus HGDHCNMN_01910 1121441.AUCX01000008_gene2147 2.9e-35 156.4 Bacteria epsE ko:K16712 ko02020,map02020 ko00000,ko00001,ko02000 2.A.66.2.11 Bacteria COG2244@1,COG2244@2 NA|NA|NA S polysaccharide biosynthetic process HGDHCNMN_01911 1410620.SHLA_150c000010 2.7e-17 96.7 Alphaproteobacteria Bacteria 1NXQB@1224,2FAKS@1,2UTHE@28211,342UM@2 NA|NA|NA HGDHCNMN_01912 522306.CAP2UW1_0831 2.2e-61 242.7 Betaproteobacteria epsG 2.7.10.1 ko:K08252 ko00000,ko01000 Bacteria 1MVI9@1224,2VN0C@28216,COG0489@1,COG0489@2 NA|NA|NA D Capsular exopolysaccharide family HGDHCNMN_01913 522306.CAP2UW1_0830 5.6e-104 384.8 Betaproteobacteria epsF Bacteria 1RK0N@1224,2VHPS@28216,COG3206@1,COG3206@2 NA|NA|NA M TIGRFAM chain length determinant protein EpsF HGDHCNMN_01914 522306.CAP2UW1_0829 1.7e-79 302.8 Betaproteobacteria epsE ko:K01991,ko:K20988 ko02026,ko05111,map02026,map05111 ko00000,ko00001,ko02000 1.B.18 Bacteria 1N7GP@1224,2VIY9@28216,COG1596@1,COG1596@2 NA|NA|NA M polysaccharide export protein HGDHCNMN_01915 522306.CAP2UW1_0863 5.7e-38 165.6 Betaproteobacteria Bacteria 1RE1P@1224,2VR77@28216,COG5338@1,COG5338@2 NA|NA|NA S TIGRFAM exopolysaccharide biosynthesis operon protein EpsL HGDHCNMN_01916 62928.azo2246 1.8e-129 469.5 Rhodocyclales epsB ko:K03606 ko05111,map05111 ko00000,ko00001 Bacteria 1MV6W@1224,2KW11@206389,2VH0H@28216,COG2148@1,COG2148@2 NA|NA|NA M COG2148 Sugar transferases involved in lipopolysaccharide synthesis HGDHCNMN_01917 159087.Daro_0992 1.4e-211 742.3 Rhodocyclales ko:K07576 ko00000 Bacteria 1MUDD@1224,2KURS@206389,2VHFX@28216,COG1236@1,COG1236@2 NA|NA|NA J exonuclease of the beta-lactamase fold involved in RNA processing HGDHCNMN_01918 265072.Mfla_0108 1.8e-97 363.2 Nitrosomonadales Bacteria 1MUX8@1224,2KMWM@206350,2VP77@28216,COG3182@1,COG3182@2 NA|NA|NA S PFAM PepSY-associated TM helix domain protein HGDHCNMN_01919 305700.B447_14549 0.0 1670.2 Rhodocyclales nrdJ GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.17.4.1 ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1MUJ8@1224,2KUCG@206389,2VH3Q@28216,COG0209@1,COG0209@2 NA|NA|NA F Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen HGDHCNMN_01920 62928.azo1541 1.9e-83 315.5 Betaproteobacteria 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 Bacteria 1MY47@1224,2WEFT@28216,COG0625@1,COG0625@2 NA|NA|NA H Glutathione S-transferase, C-terminal domain HGDHCNMN_01921 1207076.ALAT01000186_gene2905 7.4e-144 516.9 Pseudomonas stutzeri group cheB 3.1.1.61,3.5.1.44 ko:K03412 ko02020,ko02030,map02020,map02030 M00506 ko00000,ko00001,ko00002,ko01000,ko02022,ko02035 Bacteria 1MWCN@1224,1RN67@1236,1Z0GA@136846,COG2201@1,COG2201@2 NA|NA|NA NT catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR HGDHCNMN_01922 1390370.O203_20975 1.7e-43 182.6 Pseudomonas aeruginosa group cheD 3.5.1.44 ko:K03411 ko02030,map02030 ko00000,ko00001,ko01000,ko02035 Bacteria 1RDDB@1224,1S41X@1236,1YGJ6@136841,COG1871@1,COG1871@2 NA|NA|NA NT Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis HGDHCNMN_01923 1117958.PE143B_0103730 1.5e-99 369.4 Gammaproteobacteria cheR2 2.1.1.80 ko:K00575 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko01000,ko02035 Bacteria 1MU6W@1224,1S3M6@1236,COG1352@1,COG1352@2 NA|NA|NA NT Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP HGDHCNMN_01924 1121035.AUCH01000045_gene3247 2.6e-55 221.9 Rhodocyclales ko:K03408,ko:K03415 ko02020,ko02030,map02020,map02030 M00506 ko00000,ko00001,ko00002,ko02022,ko02035 Bacteria 1RAH1@1224,2KW74@206389,2VRAI@28216,COG0835@1,COG0835@2 NA|NA|NA NT Chemotaxis signal transduction protein HGDHCNMN_01925 1198452.Jab_1c09390 7e-90 338.2 Oxalobacteraceae cheD2 ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2VGZ8@28216,476CA@75682,COG0840@1,COG0840@2 NA|NA|NA NT Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). HGDHCNMN_01926 1112217.PPL19_18897 3.3e-247 861.3 Gammaproteobacteria cheA2 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.13.3 ko:K02487,ko:K03407,ko:K06596 ko02020,ko02025,ko02030,map02020,map02025,map02030 M00506,M00507 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 Bacteria 1MUAG@1224,1RMS6@1236,COG0643@1,COG0643@2,COG2198@1,COG2198@2 NA|NA|NA T COG0643 Chemotaxis protein histidine kinase and related kinases HGDHCNMN_01927 382245.ASA_3265 3.7e-11 74.3 Aeromonadales ko:K04749,ko:K06378 ko00000,ko03021 Bacteria 1N8B6@1224,1SDVH@1236,1Y65X@135624,COG1366@1,COG1366@2 NA|NA|NA T STAS domain HGDHCNMN_01928 1453503.AU05_11840 3e-52 211.1 Pseudomonas aeruginosa group Bacteria 1RHDD@1224,1S4NM@1236,1YKPH@136841,COG0745@1,COG0745@2 NA|NA|NA KT cheY-homologous receiver domain HGDHCNMN_01929 1121035.AUCH01000012_gene3051 1.5e-76 293.5 Rhodocyclales ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1NCMF@1224,2KW4V@206389,2VJC0@28216,COG0840@1,COG0840@2 NA|NA|NA NT Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). HGDHCNMN_01930 1500894.JQNN01000001_gene1200 3.8e-23 115.2 Oxalobacteraceae Bacteria 1QWG0@1224,2WGYI@28216,474FD@75682,COG0745@1,COG0745@2 NA|NA|NA KT Helix-turn-helix domain HGDHCNMN_01931 883126.HMPREF9710_03302 1e-28 133.7 Oxalobacteraceae Bacteria 1QWG0@1224,2WGYI@28216,474FD@75682,COG0745@1,COG0745@2 NA|NA|NA KT Helix-turn-helix domain HGDHCNMN_01932 1121035.AUCH01000002_gene1629 6.8e-10 68.6 Rhodocyclales acnB GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006417,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009060,GO:0009062,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019222,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0031323,GO:0031326,GO:0032268,GO:0032787,GO:0034248,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046395,GO:0046459,GO:0046487,GO:0047456,GO:0048037,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0060255,GO:0065007,GO:0071704,GO:0072329,GO:0072350,GO:0080090,GO:0097159,GO:1901363,GO:1901575,GO:2000112 4.2.1.3,4.2.1.99 ko:K01682 ko00020,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173 R01324,R01325,R01900,R04425 RC00497,RC00498,RC00618,RC01153 br01601,ko00000,ko00001,ko00002,ko01000 iECIAI1_1343.ECIAI1_0116,iPC815.YPO3415 Bacteria 1MVCR@1224,2KUV7@206389,2VHT2@28216,COG1049@1,COG1049@2 NA|NA|NA C Belongs to the aconitase IPM isomerase family HGDHCNMN_01933 1304883.KI912532_gene2678 0.0 1352.4 Rhodocyclales clpB GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0010033,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0031249,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035966,GO:0036094,GO:0042221,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 ko:K03694,ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Bacteria 1MURH@1224,2KVIZ@206389,2VHYF@28216,COG0542@1,COG0542@2 NA|NA|NA O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE HGDHCNMN_01934 765913.ThidrDRAFT_0688 4.9e-143 514.2 Chromatiales attH Bacteria 1MUVF@1224,1RZ65@1236,1WWIJ@135613,COG5621@1,COG5621@2 NA|NA|NA S Lipocalin-like domain HGDHCNMN_01935 1249627.D779_2093 5.3e-294 1016.9 Chromatiales salY ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MVCT@1224,1RNP1@1236,1WWFF@135613,COG0577@1,COG0577@2,COG4591@1,COG4591@2 NA|NA|NA V ABC-type transport system, involved in lipoprotein release, permease component HGDHCNMN_01936 572477.Alvin_0008 1e-87 329.7 Chromatiales ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1NCFC@1224,1S2JJ@1236,1WW0W@135613,COG1136@1,COG1136@2 NA|NA|NA V pfam abc HGDHCNMN_01937 497321.C664_00325 4.2e-107 394.4 Rhodocyclales hpnC 2.5.1.32,2.5.1.99,4.2.3.156 ko:K02291,ko:K21679 ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110 M00097 R02065,R04218,R07270,R10177 RC00362,RC01101,RC02869 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 1N6J2@1224,2KUC0@206389,2VIZC@28216,COG1562@1,COG1562@2 NA|NA|NA I phytoene HGDHCNMN_01938 497321.C664_00320 2.3e-124 451.8 Rhodocyclales hpnD 2.5.1.32,2.5.1.99 ko:K02291 ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110 M00097 R02065,R04218,R07270,R10177 RC00362,RC01101,RC02869 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 1MX4W@1224,2KUHC@206389,2VJ13@28216,COG1562@1,COG1562@2 NA|NA|NA I Squalene synthase HpnD HGDHCNMN_01939 76114.ebA6811 3e-131 475.3 Rhodocyclales hpnE 1.17.8.1 ko:K21677 ko00000,ko01000 Bacteria 1NQUH@1224,2KVAB@206389,2VJV1@28216,COG1232@1,COG1232@2 NA|NA|NA H squalene-associated FAD-dependent desaturase HGDHCNMN_01940 62928.azo1667 1.8e-80 305.8 Rhodocyclales ybbA GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MXG9@1224,2KUMK@206389,2VI54@28216,COG4181@1,COG4181@2 NA|NA|NA Q ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component HGDHCNMN_01941 62928.azo1580 2.9e-236 824.3 Rhodocyclales guaB GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 iAPECO1_1312.APECO1_4018,iECABU_c1320.ECABU_c28100,iECP_1309.ECP_2510,iECSF_1327.ECSF_2349,iUTI89_1310.UTI89_C2826,ic_1306.c3027 Bacteria 1MUJM@1224,2KVFJ@206389,2VH9X@28216,COG0516@1,COG0516@2,COG0517@1,COG0517@2 NA|NA|NA F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth HGDHCNMN_01942 62928.azo1579 1.3e-18 99.8 Rhodocyclales Bacteria 1RHH4@1224,2BCK1@1,2KXB5@206389,2VSPG@28216,32662@2 NA|NA|NA S Domain of unknown function (DUF4124) HGDHCNMN_01943 1000565.METUNv1_00409 3.4e-34 151.0 Rhodocyclales rnfH ko:K03154,ko:K09801 ko04122,map04122 ko00000,ko00001 Bacteria 1MZCH@1224,2KWYW@206389,2VVNX@28216,COG2914@1,COG2914@2 NA|NA|NA S Belongs to the UPF0125 (RnfH) family HGDHCNMN_01944 76114.ebA6653 1.2e-63 249.2 Rhodocyclales ratA GO:0003674,GO:0005488,GO:0006417,GO:0006446,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044877,GO:0045947,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113 ko:K18588 ko00000 Bacteria 1RGUH@1224,2KW7M@206389,2VR4X@28216,COG2867@1,COG2867@2 NA|NA|NA I Oligoketide cyclase lipid transport protein HGDHCNMN_01945 62928.azo1576 5.3e-64 250.4 Rhodocyclales smpB GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363,GO:1901564 ko:K03664 ko00000 Bacteria 1RDFP@1224,2KWDY@206389,2VRG9@28216,COG0691@1,COG0691@2 NA|NA|NA J Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene HGDHCNMN_01946 522306.CAP2UW1_3344 4e-61 241.9 Betaproteobacteria Bacteria 1R3PT@1224,2VN88@28216,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeat HGDHCNMN_01947 1397666.RS24_01480 9.1e-28 129.4 unclassified Alphaproteobacteria phhB 4.2.1.96 ko:K01724 ko00790,map00790 R04734 RC01208 ko00000,ko00001,ko01000,ko04147 Bacteria 1MZ5Q@1224,2UBWN@28211,4BT3B@82117,COG2154@1,COG2154@2 NA|NA|NA H Pterin 4 alpha carbinolamine dehydratase HGDHCNMN_01948 748247.AZKH_2419 4.9e-296 1024.2 Rhodocyclales ko:K09800 ko00000,ko02000 Bacteria 1QWGG@1224,2KZX3@206389,2WGYX@28216,COG2911@1,COG2911@2 NA|NA|NA S Domain of Unknown Function (DUF748) HGDHCNMN_01949 76114.ebA6296 6.9e-154 550.4 Rhodocyclales yhiN GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K07007 ko00000 Bacteria 1MUGC@1224,2KW07@206389,2VH8N@28216,COG2081@1,COG2081@2 NA|NA|NA S HI0933-like protein HGDHCNMN_01950 1123367.C666_13625 2.2e-85 321.6 Rhodocyclales ppa 3.6.1.1 ko:K01507 ko00190,map00190 ko00000,ko00001,ko01000 iJN746.PP_0538 Bacteria 1RA2F@1224,2KW7D@206389,2VQC0@28216,COG0221@1,COG0221@2 NA|NA|NA C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions HGDHCNMN_01951 1121035.AUCH01000001_gene2076 7.2e-16 89.4 Rhodocyclales copZ ko:K07213,ko:K08364 ko04978,map04978 ko00000,ko00001,ko02000 1.A.72.1 Bacteria 1NGBD@1224,2KXPB@206389,2VXV9@28216,COG2608@1,COG2608@2 NA|NA|NA P Heavy-metal-associated domain HGDHCNMN_01952 76114.ebA5154 9e-275 953.0 Rhodocyclales copA GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944 3.6.3.54 ko:K17686 ko01524,ko04016,map01524,map04016 R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 Bacteria 1MU08@1224,2KU93@206389,2VH8J@28216,COG2217@1,COG2217@2 NA|NA|NA P ATPase, P-type (transporting), HAD superfamily, subfamily IC HGDHCNMN_01953 76114.ebA5153 1.2e-97 362.8 Rhodocyclales braZ ko:K09792 ko00000 Bacteria 1RIGJ@1224,2KW29@206389,2VINE@28216,COG2836@1,COG2836@2 NA|NA|NA S Cytochrome C biogenesis protein transmembrane region HGDHCNMN_01954 1123367.C666_13650 8.8e-222 776.2 Rhodocyclales hemN GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.98.3 ko:K02495 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R06895 RC00884 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV1I@1224,2KVK4@206389,2VJ1F@28216,COG0635@1,COG0635@2 NA|NA|NA H Belongs to the anaerobic coproporphyrinogen-III oxidase family HGDHCNMN_01955 1123367.C666_13655 1.1e-111 409.5 Rhodocyclales fnr ko:K01420 ko00000,ko03000 Bacteria 1MVGE@1224,2KUDT@206389,2VH04@28216,COG0664@1,COG0664@2 NA|NA|NA K COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases HGDHCNMN_01956 85643.Tmz1t_1287 5e-34 150.6 Rhodocyclales sirB Bacteria 1MZN6@1224,2KWZ1@206389,2VUWN@28216,COG3094@1,COG3094@2 NA|NA|NA S Invasion gene expression up-regulator SirB HGDHCNMN_01957 1304883.KI912532_gene1802 2.1e-105 388.7 Rhodocyclales Bacteria 1N2Y0@1224,2KUI3@206389,2VH72@28216,COG0426@1,COG0426@2 NA|NA|NA C Metallo-beta-lactamase superfamily HGDHCNMN_01958 640081.Dsui_1638 2.8e-39 168.7 Rhodocyclales ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1RECT@1224,2KWC6@206389,2VRNK@28216,COG0840@1,COG0840@2 NA|NA|NA NT transmembrane signaling receptor activity HGDHCNMN_01959 1382359.JIAL01000001_gene1857 2.3e-112 413.3 Acidobacteriia agmG Bacteria 2JKDZ@204432,3Y4EU@57723,COG4389@1,COG4389@2 NA|NA|NA L Site-specific recombinase HGDHCNMN_01960 748280.NH8B_2789 6.1e-92 344.0 Neisseriales truC GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.26 ko:K06175 ko00000,ko01000,ko03016 Bacteria 1N8GW@1224,2KQJV@206351,2VKYT@28216,COG0564@1,COG0564@2 NA|NA|NA J Pseudouridine synthase HGDHCNMN_01961 1123487.KB892863_gene1826 5e-13 81.6 Rhodocyclales ko:K02452 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1NGWI@1224,2DTKB@1,2KXKK@206389,2VY5N@28216,33KR8@2 NA|NA|NA S Type II secretion system protein C HGDHCNMN_01962 76114.ebA4915 1.5e-207 729.6 Rhodocyclales gspD ko:K02453,ko:K03219 ko03070,ko05111,map03070,map05111 M00331,M00332,M00542 ko00000,ko00001,ko00002,ko02044 3.A.15,3.A.6.1,3.A.6.3 Bacteria 1MUUA@1224,2KVIF@206389,2VI7X@28216,COG1450@1,COG1450@2 NA|NA|NA NU COG1450 Type II secretory pathway, component PulD HGDHCNMN_01963 76114.ebA4914 8.7e-204 716.5 Rhodocyclales gspE ko:K02454 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1MU7V@1224,2KVIS@206389,2VHQ1@28216,COG2804@1,COG2804@2 NA|NA|NA NU COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB HGDHCNMN_01964 76114.ebA4913 2e-150 538.9 Rhodocyclales gspF ko:K02455,ko:K02653 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1MV4U@1224,2KVWZ@206389,2VM1X@28216,COG1459@1,COG1459@2 NA|NA|NA NU General secretion pathway protein F HGDHCNMN_01965 76114.ebB170 2.5e-55 221.5 Rhodocyclales gspG ko:K02246,ko:K02456,ko:K02457,ko:K02458 ko03070,ko05111,map03070,map05111 M00331,M00429 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1RDX2@1224,2KWEI@206389,2VR7N@28216,COG2165@1,COG2165@2 NA|NA|NA U general secretion pathway protein G HGDHCNMN_01966 76114.ebA4910 3.8e-35 154.8 Rhodocyclales ko:K02456,ko:K02457,ko:K02458 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1NC12@1224,2KX7P@206389,2WACC@28216,COG2165@1,COG2165@2 NA|NA|NA NU Prokaryotic N-terminal methylation motif HGDHCNMN_01967 76114.ebA4908 1.2e-32 146.0 Rhodocyclales gspI ko:K02456,ko:K02457,ko:K02458 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1N0C2@1224,2KZP4@206389,2VVJ8@28216,COG2165@1,COG2165@2 NA|NA|NA NU Type II secretion system (T2SS), protein I HGDHCNMN_01968 76114.ebA4906 1.1e-33 150.2 Rhodocyclales gspJ GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 ko:K02459 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1PSH7@1224,2KX5W@206389,2WA8C@28216,COG4795@1,COG4795@2 NA|NA|NA U Type II secretion system (T2SS), protein J HGDHCNMN_01969 76114.ebA4904 3.7e-78 298.5 Rhodocyclales gspK ko:K02460 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1RBNV@1224,2KX0D@206389,2VS9P@28216,COG3156@1,COG3156@2 NA|NA|NA U Type II secretion system (T2SS), protein K HGDHCNMN_01970 76114.ebA4900 1.6e-57 230.3 Rhodocyclales gspL ko:K02461 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1N3JC@1224,2KWZV@206389,2VV1Z@28216,COG3297@1,COG3297@2 NA|NA|NA U Type II secretion system (T2SS), protein L HGDHCNMN_01971 264198.Reut_A3227 2.4e-07 62.4 Burkholderiaceae gspM ko:K02462 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1K14Z@119060,1NAXX@1224,2VY4T@28216,COG3149@1,COG3149@2 NA|NA|NA U General secretion pathway HGDHCNMN_01972 1123487.KB892863_gene1815 1.1e-40 173.7 Rhodocyclales ko:K02463 ko05111,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1NP69@1224,29KQP@1,2KXII@206389,2VYYQ@28216,307N0@2 NA|NA|NA S Type II secretion system (T2SS), protein N HGDHCNMN_01973 76114.ebA4676 3.6e-122 444.9 Rhodocyclales tal 1.1.1.343,1.1.1.44,2.2.1.1,2.2.1.2 ko:K00033,ko:K00615,ko:K00616 ko00030,ko00480,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00480,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00006,M00007,M00165,M00167 R01067,R01528,R01641,R01827,R01830,R06590,R10221 RC00001,RC00032,RC00226,RC00439,RC00539,RC00571,RC00604,RC01560 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWQ8@1224,2KV4P@206389,2VHIN@28216,COG0176@1,COG0176@2 NA|NA|NA H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway HGDHCNMN_01974 1123367.C666_12530 0.0 1271.9 Rhodocyclales pepN GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0009056,GO:0009987,GO:0016020,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.11.2 ko:K01256 ko00480,ko01100,map00480,map01100 R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 iECIAI1_1343.ECIAI1_0973,iECO103_1326.ECO103_0977,iECP_1309.ECP_0944,iECSE_1348.ECSE_0993,iECW_1372.ECW_m1042,iEKO11_1354.EKO11_2898,iWFL_1372.ECW_m1042 Bacteria 1MUCI@1224,2KUAW@206389,2VJ68@28216,COG0308@1,COG0308@2 NA|NA|NA E aminopeptidase N HGDHCNMN_01975 1121035.AUCH01000002_gene1479 8.3e-74 283.5 Rhodocyclales dedA ko:K03975 ko00000 Bacteria 1MX4M@1224,2KW05@206389,2VJCP@28216,COG0586@1,COG0586@2 NA|NA|NA S SNARE associated Golgi protein HGDHCNMN_01976 748247.AZKH_3496 1.1e-86 326.2 Rhodocyclales purN 2.1.2.2 ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWN1@1224,2KVYQ@206389,2VJG8@28216,COG0299@1,COG0299@2 NA|NA|NA F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate HGDHCNMN_01977 76114.ebA651 2.2e-50 206.5 Rhodocyclales dacA1 3.4.16.4 ko:K01286,ko:K03561,ko:K03642,ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011,ko02000 1.A.30.2.1 Bacteria 1RCA5@1224,2KWVE@206389,2VTK8@28216,COG3087@1,COG3087@2 NA|NA|NA D Protein of unknown function (DUF3108) HGDHCNMN_01978 305700.B447_01436 1.9e-159 568.9 Rhodocyclales sun GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 ko:K03500 ko00000,ko01000,ko03009 Bacteria 1MV2Q@1224,2KUND@206389,2VI1D@28216,COG0144@1,COG0144@2 NA|NA|NA J Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family HGDHCNMN_01979 76114.ebA647 3e-41 175.3 Rhodocyclales pld 3.1.4.4 ko:K06131,ko:K17717 ko00564,ko00565,ko01100,ko01110,map00564,map00565,map01100,map01110 R01310,R02051,R07385,R07390 RC00017,RC00425 ko00000,ko00001,ko01000 Bacteria 1RG6H@1224,2KWF8@206389,2VRJW@28216,COG1502@1,COG1502@2 NA|NA|NA I COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes HGDHCNMN_01980 76114.ebA645 9.4e-125 453.8 Rhodocyclales aefA ko:K05802 ko00000,ko02000 1.A.23.1.1 Bacteria 1MWSA@1224,2KU8B@206389,2VJTH@28216,COG3264@1,COG3264@2 NA|NA|NA M mechanosensitive HGDHCNMN_01981 497321.C664_05031 1.8e-159 568.9 Rhodocyclales desA 1.14.19.1 ko:K00507 ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212 R02222 RC00917 ko00000,ko00001,ko01000,ko01004 Bacteria 1N2MA@1224,2KV7H@206389,2VHRS@28216,COG1398@1,COG1398@2 NA|NA|NA I Desaturase HGDHCNMN_01982 748247.AZKH_3515 2.9e-79 301.6 Rhodocyclales rluE 5.4.99.19,5.4.99.20,5.4.99.22 ko:K06178,ko:K06181,ko:K06183 ko00000,ko01000,ko03009 Bacteria 1R9VV@1224,2KW2Q@206389,2VQAQ@28216,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family HGDHCNMN_01983 159087.Daro_3253 9.6e-45 186.4 Rhodocyclales ko:K09005 ko00000 Bacteria 1MZBJ@1224,2KWQ3@206389,2VSCK@28216,COG1430@1,COG1430@2 NA|NA|NA S Uncharacterized ACR, COG1430 HGDHCNMN_01984 1286631.X805_06860 0.0 1253.4 unclassified Burkholderiales uvrD GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006289,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017116,GO:0022607,GO:0031297,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0042802,GO:0043142,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045005,GO:0046483,GO:0050896,GO:0051259,GO:0051260,GO:0051276,GO:0051716,GO:0065003,GO:0070035,GO:0070581,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1KJ39@119065,1MU0G@1224,2VH4I@28216,COG0210@1,COG0210@2 NA|NA|NA L Helicase HGDHCNMN_01985 62928.azo3211 8.4e-288 996.1 Rhodocyclales maeB GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 ko:K00027,ko:K00029,ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,ko02020,map00430,map00620,map00640,map00680,map00710,map00720,map01100,map01120,map01200,map02020 M00169,M00172,M00357,M00579 R00214,R00216,R00230,R00921 RC00004,RC00105,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1637 Bacteria 1MU0A@1224,2KV7P@206389,2VIYB@28216,COG0280@1,COG0280@2,COG0281@1,COG0281@2 NA|NA|NA C Malic enzyme HGDHCNMN_01986 76114.ebA4396 2.4e-141 508.4 Rhodocyclales qor 1.6.5.5 ko:K00344 ko00000,ko01000 Bacteria 1MWBD@1224,2KVPQ@206389,2VH3Z@28216,COG0604@1,COG0604@2 NA|NA|NA C Zinc-binding dehydrogenase HGDHCNMN_01987 1000565.METUNv1_02157 4.6e-11 74.3 Rhodocyclales Bacteria 1NJIU@1224,2ETMM@1,2KXH1@206389,2VYX1@28216,33M5D@2 NA|NA|NA HGDHCNMN_01988 375286.mma_3530 2e-69 269.6 Oxalobacteraceae Bacteria 1RDMU@1224,2WGMT@28216,473DH@75682,COG2199@1,COG2199@2 NA|NA|NA T diguanylate cyclase HGDHCNMN_01989 265072.Mfla_1842 3.9e-48 199.1 Nitrosomonadales 3.4.21.105 ko:K19225 ko00000,ko01000,ko01002 Bacteria 1PRTS@1224,2KM1G@206350,2VM82@28216,COG0705@1,COG0705@2 NA|NA|NA S Rhomboid family HGDHCNMN_01990 76114.ebA4398 0.0 1908.3 Rhodocyclales dnaE GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MUIF@1224,2KUJ2@206389,2VH3F@28216,COG0587@1,COG0587@2 NA|NA|NA L DNA polymerase III alpha subunit HGDHCNMN_01992 1218075.BAYA01000005_gene2007 2.1e-51 209.1 Burkholderiaceae glxC 2.1.1.21 ko:K22082,ko:K22083 ko00680,ko01120,map00680,map01120 R01586 RC00554 ko00000,ko00001,ko01000 Bacteria 1K4BG@119060,1MUUQ@1224,2VHP7@28216,COG2218@1,COG2218@2 NA|NA|NA C GXGXG motif HGDHCNMN_01993 159450.NH14_09585 4.8e-144 517.3 Burkholderiaceae glxB 2.1.1.21 ko:K22081 ko00680,ko01120,map00680,map01120 R01586 RC00554 ko00000,ko00001,ko01000 Bacteria 1JZVD@119060,1MWHP@1224,2VM3C@28216,COG0034@1,COG0034@2 NA|NA|NA F Glutamine amidotransferase domain HGDHCNMN_01994 637389.Acaty_m0187 4.8e-201 707.2 Acidithiobacillales glnT 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 Bacteria 1MUGQ@1224,1RR0P@1236,2NDQF@225057,COG0174@1,COG0174@2 NA|NA|NA E Glutamine synthetase, catalytic domain HGDHCNMN_01995 159450.NH14_09595 3e-49 201.8 Burkholderiaceae gcvT 1.5.99.5,2.1.2.10 ko:K00605,ko:K06980,ko:K22086 ko00260,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200 M00532 R00609,R01221,R02300,R04125 RC00022,RC00069,RC00183,RC00190,RC00557,RC02834 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 1KC75@119060,1N2I3@1224,2VVMU@28216,COG0404@1,COG0404@2 NA|NA|NA E Sarcosine oxidase, gamma subunit family HGDHCNMN_01996 1000565.METUNv1_03597 0.0 1276.5 Rhodocyclales 1.5.3.1,2.1.2.10 ko:K00302,ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R00610,R01221,R02300,R04125 RC00022,RC00060,RC00069,RC00183,RC00557,RC02834 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVEK@1224,2KYM2@206389,2VK5U@28216,COG0404@1,COG0404@2,COG0446@1,COG0446@2 NA|NA|NA C Sarcosine oxidase, gamma subunit family HGDHCNMN_01997 159450.NH14_09605 3.3e-34 150.6 Burkholderiaceae 1.5.3.1 ko:K00304 ko00260,ko01100,map00260,map01100 R00610 RC00060,RC00557 ko00000,ko00001,ko01000 Bacteria 1KE7B@119060,1NA4N@1224,2VX6V@28216,COG4311@1,COG4311@2 NA|NA|NA E Sarcosine oxidase, delta subunit family HGDHCNMN_01998 159450.NH14_09610 1.3e-216 758.8 Burkholderiaceae 1.5.3.1 ko:K00303 ko00260,ko01100,map00260,map01100 R00610 RC00060,RC00557 ko00000,ko00001,ko01000 Bacteria 1KH0A@119060,1MVM6@1224,2VKCE@28216,COG0665@1,COG0665@2 NA|NA|NA E FAD dependent oxidoreductase HGDHCNMN_01999 395495.Lcho_0174 6.6e-135 486.9 unclassified Burkholderiales purU 3.5.1.10 ko:K01433 ko00630,ko00670,map00630,map00670 R00944 RC00026,RC00111 ko00000,ko00001,ko01000 Bacteria 1KJBU@119065,1MVCF@1224,2VIXE@28216,COG0788@1,COG0788@2 NA|NA|NA F Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) HGDHCNMN_02000 927677.ALVU02000001_gene4076 1.4e-78 299.3 Cyanobacteria Bacteria 1GB5W@1117,COG1396@1,COG1396@2 NA|NA|NA K AraC-like ligand binding domain HGDHCNMN_02001 1038869.AXAN01000089_gene26 2.6e-161 575.1 Burkholderiaceae amtB GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008519,GO:0015075,GO:0015291,GO:0015292,GO:0015669,GO:0015670,GO:0015696,GO:0015893,GO:0016020,GO:0016021,GO:0019755,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0098655 ko:K03320 ko00000,ko02000 1.A.11 iEcE24377_1341.EcE24377A_0487 Bacteria 1K0BN@119060,1NR9F@1224,2VJ8B@28216,COG0004@1,COG0004@2 NA|NA|NA P Ammonium transporter HGDHCNMN_02002 62928.azo3282 6.4e-54 217.2 Rhodocyclales ko:K07011 ko00000 Bacteria 1MVBX@1224,2KUAM@206389,2VMDA@28216,COG3206@1,COG3206@2 NA|NA|NA M Polysaccharide chain length determinant protein HGDHCNMN_02003 62928.azo3281 5.7e-93 347.8 Rhodocyclales wzc2 2.7.10.1 ko:K08252 ko00000,ko01000 Bacteria 1MVI9@1224,2KUMI@206389,2VJEB@28216,COG0489@1,COG0489@2 NA|NA|NA D COG0489 ATPases involved in chromosome partitioning HGDHCNMN_02004 497321.C664_09410 1.3e-43 184.5 Rhodocyclales Bacteria 1R676@1224,2DBM3@1,2KWS6@206389,2VPUB@28216,2Z9WX@2 NA|NA|NA S TIGRFAM PEP-CTERM system associated protein HGDHCNMN_02005 62928.azo3279 4.7e-122 444.5 Rhodocyclales exeA Bacteria 1MU3G@1224,2KUI6@206389,2VIK1@28216,COG3267@1,COG3267@2 NA|NA|NA U COG3267 Type II secretory pathway, component ExeA HGDHCNMN_02006 62928.azo3277 2.7e-120 438.3 Rhodocyclales Bacteria 1MWMZ@1224,2KU7E@206389,2VIB9@28216,COG0726@1,COG0726@2 NA|NA|NA G polysaccharide deactylase family protein HGDHCNMN_02007 1123367.C666_00220 6.4e-153 547.0 Rhodocyclales Bacteria 1MXFY@1224,2KVBP@206389,2VNEW@28216,COG2348@1,COG2348@2 NA|NA|NA V Acetyltransferase (GNAT) domain HGDHCNMN_02008 85643.Tmz1t_3274 1.6e-166 592.4 Rhodocyclales Bacteria 1MVIM@1224,2KUCI@206389,2VJT7@28216,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferases group 1 HGDHCNMN_02009 1348657.M622_13850 1.8e-125 456.1 Rhodocyclales Bacteria 1MU9C@1224,2KUXN@206389,2VIBU@28216,COG0438@1,COG0438@2 NA|NA|NA M Glycosyltransferase Family 4 HGDHCNMN_02010 305700.B447_02778 0.0 1122.1 Rhodocyclales asnB 6.3.5.4 ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 R00578 RC00010 ko00000,ko00001,ko01000,ko01002 Bacteria 1MW4E@1224,2KUED@206389,2VHBY@28216,COG0367@1,COG0367@2 NA|NA|NA E Asparagine synthase HGDHCNMN_02011 497321.C664_09480 5.1e-194 683.7 Rhodocyclales pimB Bacteria 1MU9C@1224,2KVFD@206389,2VHM2@28216,COG0438@1,COG0438@2 NA|NA|NA M PEP-CTERM exosortase 1-associated glycosyltransferase, Daro_2409 family protein HGDHCNMN_02012 85643.Tmz1t_3271 2.1e-138 498.8 Rhodocyclales pimB Bacteria 1R2WM@1224,2KW40@206389,2VKPJ@28216,COG0297@1,COG0297@2,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferases group 1 HGDHCNMN_02013 497321.C664_09490 9.2e-200 703.0 Rhodocyclales paaK 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 R02539 RC00004,RC00014 ko00000,ko00001,ko01000 Bacteria 1MV1W@1224,2KVNW@206389,2VMX6@28216,COG1541@1,COG1541@2 NA|NA|NA H Capsular polysaccharide biosynthesis protein CapK HGDHCNMN_02014 159087.Daro_2412 5.7e-101 374.8 Rhodocyclales Bacteria 1PX0E@1224,2KVT5@206389,2VKT7@28216,COG3307@1,COG3307@2 NA|NA|NA M O-antigen ligase like membrane protein HGDHCNMN_02015 1348657.M622_13830 8e-75 288.1 Rhodocyclales epsH Bacteria 1MXZG@1224,2KUGS@206389,2VMAH@28216,COG1269@1,COG1269@2 NA|NA|NA C Protein of unknown function (DUF3485) HGDHCNMN_02016 1500894.JQNN01000001_gene3732 1.2e-100 373.6 Oxalobacteraceae pimB GO:0000009,GO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0033164,GO:0040007,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.346 ko:K13668 R11703,R11704 ko00000,ko01000,ko01003 GT4 Bacteria 1MVKH@1224,2VIWN@28216,474GQ@75682,COG0438@1,COG0438@2,COG0726@1,COG0726@2 NA|NA|NA G Polysaccharide deacetylase HGDHCNMN_02017 644966.Tmar_0646 4.1e-41 176.0 Clostridia Bacteria 1V0G0@1239,25BFP@186801,COG0438@1,COG0438@2 NA|NA|NA M Tetratricopeptide repeat HGDHCNMN_02018 572477.Alvin_1800 3.6e-77 295.0 Gammaproteobacteria aacC 2.3.1.81 ko:K00662 ko00000,ko01000,ko01504 Bacteria 1NBKU@1224,1SD1W@1236,COG2746@1,COG2746@2 NA|NA|NA V Aminoglycoside 3-N-acetyltransferase HGDHCNMN_02019 572477.Alvin_1794 1.6e-176 625.5 Gammaproteobacteria Bacteria 1QZ4E@1224,1S48V@1236,COG3533@1,COG3533@2 NA|NA|NA S Beta-L-arabinofuranosidase, GH127 HGDHCNMN_02020 1238182.C882_1644 1.7e-58 233.8 Rhodospirillales pssL Bacteria 1R9I0@1224,2JZTK@204441,2TTBK@28211,COG2244@1,COG2244@2 NA|NA|NA S Polysaccharide biosynthesis protein HGDHCNMN_02021 305700.B447_08948 3.2e-157 561.2 Rhodocyclales hemB GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 ko:K01698 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R00036 RC00918,RC01781 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MWMW@1224,2KVZB@206389,2VHC6@28216,COG0113@1,COG0113@2 NA|NA|NA H Belongs to the ALAD family HGDHCNMN_02022 497321.C664_12485 2.3e-56 225.3 Rhodocyclales yafL GO:0000270,GO:0003674,GO:0003824,GO:0004175,GO:0006022,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009254,GO:0016787,GO:0019538,GO:0030203,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901564 ko:K19303 ko00000,ko01000,ko01002,ko01011 Bacteria 1RJ3U@1224,2KWTG@206389,2VSD3@28216,COG0791@1,COG0791@2 NA|NA|NA M NLP P60 protein HGDHCNMN_02023 1500890.JQNL01000001_gene1738 2.6e-47 194.9 Xanthomonadales dtd GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106026,GO:0106074,GO:0140098,GO:0140101,GO:1901360 ko:K07560 ko00000,ko01000,ko03016 Bacteria 1RGTV@1224,1S61I@1236,1X6FE@135614,COG1490@1,COG1490@2 NA|NA|NA J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality HGDHCNMN_02024 640081.Dsui_2874 8.2e-51 207.2 Rhodocyclales Z012_10940 ko:K09807 ko00000 Bacteria 1MZA2@1224,2KWKU@206389,2VQW2@28216,COG3471@1,COG3471@2 NA|NA|NA S secreted protein HGDHCNMN_02025 748247.AZKH_2064 8.9e-71 273.9 Rhodocyclales Bacteria 1NFUD@1224,2KYAA@206389,2VPJH@28216,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family HGDHCNMN_02026 62928.azo1420 4.4e-101 374.4 Rhodocyclales Bacteria 1MVRU@1224,2KXUE@206389,2VK3K@28216,COG5473@1,COG5473@2 NA|NA|NA S Predicted integral membrane protein (DUF2189) HGDHCNMN_02027 62928.azo1421 4e-81 308.1 Rhodocyclales mhpC Bacteria 1Q6AF@1224,2KWPA@206389,2VJQ3@28216,COG2267@1,COG2267@2 NA|NA|NA I Alpha beta hydrolase HGDHCNMN_02028 748247.AZKH_3035 1.1e-189 669.5 Rhodocyclales cysD 2.5.1.49 ko:K01740 ko00270,ko01100,map00270,map01100 R01287,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 Bacteria 1NQME@1224,2KVQ4@206389,2VHYA@28216,COG2873@1,COG2873@2 NA|NA|NA H Cys/Met metabolism PLP-dependent enzyme HGDHCNMN_02029 497321.C664_10672 4.5e-11 73.6 Bacteria MA20_03740 Bacteria COG5481@1,COG5481@2 NA|NA|NA S small protein containing a coiled-coil domain HGDHCNMN_02030 1000565.METUNv1_01819 1.9e-12 78.2 Rhodocyclales Bacteria 1PRVM@1224,2ADG2@1,2KZG5@206389,2WA10@28216,31365@2 NA|NA|NA S Protein of unknown function (DUF3567) HGDHCNMN_02031 748247.AZKH_1785 4.3e-71 274.2 Rhodocyclales greB GO:0006139,GO:0006351,GO:0006352,GO:0006354,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010604,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031437,GO:0031439,GO:0032774,GO:0032784,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903311,GO:1903313,GO:1903506,GO:2000112,GO:2001141 ko:K04760 ko00000,ko03021 Bacteria 1RAP0@1224,2KW25@206389,2VQ09@28216,COG0782@1,COG0782@2 NA|NA|NA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length HGDHCNMN_02032 1123487.KB892867_gene1004 7.4e-96 358.2 Rhodocyclales Bacteria 1NSQ1@1224,2KUJ4@206389,2VQJ3@28216,COG4251@1,COG4251@2 NA|NA|NA T Signal transduction histidine kinase HGDHCNMN_02033 748247.AZKH_1786 2.7e-311 1074.3 Rhodocyclales htpG GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010035,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030312,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042623,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071450,GO:0071451,GO:0071944,GO:1901700,GO:1901701 ko:K04079 ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418 ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147 Bacteria 1MUUE@1224,2KUTN@206389,2VHHJ@28216,COG0326@1,COG0326@2 NA|NA|NA O Molecular chaperone. Has ATPase activity HGDHCNMN_02035 62928.azo1428 3e-123 448.0 Rhodocyclales Bacteria 1N2Y0@1224,2KVXH@206389,2VH72@28216,COG0426@1,COG0426@2 NA|NA|NA C Metallo-beta-lactamase superfamily HGDHCNMN_02036 497321.C664_14059 2.7e-187 661.4 Rhodocyclales MA20_01305 ko:K09989 ko00000 Bacteria 1MUAJ@1224,2KUDU@206389,2VJ99@28216,COG3825@1,COG3825@2 NA|NA|NA S Von Willebrand factor A HGDHCNMN_02037 62928.azo1431 2.6e-144 518.1 Rhodocyclales Bacteria 1MV5I@1224,2KVTW@206389,2VH9H@28216,COG0714@1,COG0714@2 NA|NA|NA O ATPase (AAA HGDHCNMN_02038 748247.AZKH_2879 1.5e-116 426.0 Rhodocyclales acuC Bacteria 1MU7P@1224,2KVJU@206389,2VJ0T@28216,COG0123@1,COG0123@2 NA|NA|NA BQ histone deacetylase HGDHCNMN_02039 748247.AZKH_2878 7e-156 557.0 Rhodocyclales 3.5.1.32 ko:K01451 ko00360,map00360 R01424 RC00096,RC00162 ko00000,ko00001,ko01000,ko01002 Bacteria 1MUIV@1224,2KUN7@206389,2VIS0@28216,COG1473@1,COG1473@2 NA|NA|NA S amidohydrolase HGDHCNMN_02040 1123367.C666_12410 2.2e-276 958.4 Rhodocyclales ybbP GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MU9R@1224,2KU7T@206389,2VHHQ@28216,COG3127@1,COG3127@2 NA|NA|NA Q ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component HGDHCNMN_02042 497321.C664_18282 2e-39 170.6 Rhodocyclales Bacteria 1QVC4@1224,2KWNJ@206389,2WGPK@28216,COG1273@1,COG1273@2 NA|NA|NA S zinc-ribbon domain HGDHCNMN_02043 748247.AZKH_3748 2.7e-123 448.4 Rhodocyclales prmA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 ko:K02687 ko00000,ko01000,ko03009 Bacteria 1MUPC@1224,2KUJE@206389,2VH76@28216,COG2264@1,COG2264@2 NA|NA|NA J Ribosomal protein L11 methyltransferase HGDHCNMN_02044 1123367.C666_14760 1.2e-236 825.5 Rhodocyclales accC GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04385 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU4H@1224,2KVNS@206389,2VISB@28216,COG0439@1,COG0439@2 NA|NA|NA I Biotin carboxylase HGDHCNMN_02045 305700.B447_03008 1.1e-51 209.5 Rhodocyclales accB GO:0003674,GO:0003824,GO:0003989,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009305,GO:0009987,GO:0016049,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 2.3.1.12 ko:K00627,ko:K02160 ko00010,ko00020,ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00010,map00020,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00307,M00376 R00209,R00742,R02569 RC00004,RC00040,RC00367,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 iYL1228.KPN_03664 Bacteria 1RCXA@1224,2KWBJ@206389,2VR5S@28216,COG0511@1,COG0511@2 NA|NA|NA I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA HGDHCNMN_02046 1123367.C666_14750 4.3e-39 167.9 Rhodocyclales tlpA Bacteria 1MZ5J@1224,2KWJG@206389,2VU93@28216,COG0526@1,COG0526@2 NA|NA|NA O COG0526 Thiol-disulfide isomerase and thioredoxins HGDHCNMN_02047 1348657.M622_03815 1.4e-62 246.1 Rhodocyclales Bacteria 1RFTH@1224,2KUIR@206389,2VJC9@28216,COG2413@1,COG2413@2 NA|NA|NA HGDHCNMN_02048 62928.azo0868 3.3e-194 684.5 Rhodocyclales murC 6.3.2.4,6.3.2.45,6.3.2.8 ko:K01921,ko:K01924,ko:K02558 ko00471,ko00473,ko00550,ko01100,ko01502,map00471,map00473,map00550,map01100,map01502 R01150,R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 1MUC5@1224,2KUZ4@206389,2VIX5@28216,COG0773@1,COG0773@2 NA|NA|NA M Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate HGDHCNMN_02049 1123256.KB907925_gene1446 3.8e-154 552.0 Xanthomonadales ko:K21405 ko00000,ko03000 Bacteria 1NRG5@1224,1RQMR@1236,1X4UD@135614,COG3284@1,COG3284@2 NA|NA|NA KQ Bacterial regulatory protein, Fis family HGDHCNMN_02050 296591.Bpro_5302 0.0 1095.1 Comamonadaceae exaA1 1.1.2.8,1.1.2.9,1.1.9.1 ko:K00114,ko:K17760,ko:K20936 ko00010,ko00625,ko01100,ko01110,ko01120,ko01130,map00010,map00625,map01100,map01110,map01120,map01130 R05062,R05198,R05285 RC00087,RC00088,RC01039 ko00000,ko00001,ko01000 Bacteria 1MUQX@1224,2VHVH@28216,4AAF0@80864,COG2010@1,COG2010@2,COG4993@1,COG4993@2 NA|NA|NA C Pyrrolo-quinoline quinone HGDHCNMN_02051 557598.LHK_00885 3e-35 155.2 Neisseriales phoU GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 ko:K02039 ko00000 Bacteria 1MUMI@1224,2KPQP@206351,2VI2C@28216,COG0704@1,COG0704@2 NA|NA|NA P Plays a role in the regulation of phosphate uptake HGDHCNMN_02052 1123367.C666_09750 4.6e-55 221.5 Rhodocyclales ycgR Bacteria 1RBFR@1224,2M037@206389,2VQWE@28216,COG5581@1,COG5581@2 NA|NA|NA M Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility HGDHCNMN_02053 497321.C664_18769 7.3e-31 139.8 Rhodocyclales fliE ko:K02408 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1N6RZ@1224,2KWVT@206389,2VVQF@28216,COG1677@1,COG1677@2 NA|NA|NA N Flagellar hook-basal body HGDHCNMN_02054 62928.azo2714 3.7e-188 664.5 Rhodocyclales fleR ko:K10943 ko02020,ko05111,map02020,map05111 M00515 ko00000,ko00001,ko00002,ko02022 Bacteria 1MU0N@1224,2KUM3@206389,2VHSB@28216,COG2204@1,COG2204@2 NA|NA|NA T COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains HGDHCNMN_02055 748247.AZKH_1331 4.5e-128 464.5 Rhodocyclales fleS 2.7.13.3 ko:K10942 ko02020,ko05111,map02020,map05111 M00515 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1QVCN@1224,2KZW6@206389,2WGQD@28216,COG5002@1,COG5002@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_02056 62928.azo2716 5.4e-173 614.4 Rhodocyclales fliF ko:K02409 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2,3.A.6.3 Bacteria 1MUQR@1224,2KVMR@206389,2VI9M@28216,COG1766@1,COG1766@2 NA|NA|NA N The M ring may be actively involved in energy transduction HGDHCNMN_02057 748247.AZKH_1329 2.4e-149 535.0 Rhodocyclales fliG GO:0001539,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006928,GO:0006996,GO:0008150,GO:0009288,GO:0009425,GO:0009987,GO:0016020,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0040011,GO:0042802,GO:0042803,GO:0042995,GO:0043226,GO:0043228,GO:0044085,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0044780,GO:0044781,GO:0046982,GO:0046983,GO:0048870,GO:0051179,GO:0051674,GO:0070925,GO:0071840,GO:0071944,GO:0071973,GO:0071978,GO:0097588 ko:K02410 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02035 Bacteria 1MV9X@1224,2KUSM@206389,2VI19@28216,COG1536@1,COG1536@2 NA|NA|NA N flagellar motor switch protein HGDHCNMN_02058 1000565.METUNv1_00323 3.9e-48 198.4 Rhodocyclales fliH ko:K02411 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2 Bacteria 1NMQE@1224,2KZU2@206389,2WGCR@28216,COG1317@1,COG1317@2 NA|NA|NA N COG1317 Flagellar biosynthesis type III secretory pathway protein HGDHCNMN_02059 62928.azo2719 3.2e-216 757.7 Rhodocyclales fliI GO:0003674,GO:0005488,GO:0005515,GO:0042802 3.6.3.14 ko:K02412 ko02040,map02040 ko00000,ko00001,ko01000,ko02035,ko02044 3.A.6.2,3.A.6.3 Bacteria 1MUH6@1224,2KUH3@206389,2VHQ5@28216,COG1157@1,COG1157@2 NA|NA|NA NU ATPase FliI YscN family HGDHCNMN_02060 62928.azo2720 3e-46 191.4 Rhodocyclales fliJ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02413 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1N21N@1224,2KWXQ@206389,2VU9D@28216,COG2882@1,COG2882@2 NA|NA|NA N Flagellar export protein FliJ HGDHCNMN_02061 1348657.M622_13300 9e-36 157.9 Rhodocyclales fliK GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 ko:K02414 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1N7XT@1224,2KX55@206389,2VU2D@28216,COG3144@1,COG3144@2 NA|NA|NA N Flagellar hook-length control protein FliK HGDHCNMN_02062 497321.C664_16660 1.7e-30 139.4 Rhodocyclales fliL GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009425,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02415 ko00000,ko02035 Bacteria 1RARK@1224,2KWNP@206389,2VTGH@28216,COG1580@1,COG1580@2 NA|NA|NA N Controls the rotational direction of flagella during chemotaxis HGDHCNMN_02063 497321.C664_16665 1.9e-146 525.4 Rhodocyclales fliM GO:0005575,GO:0005623,GO:0005886,GO:0006935,GO:0008150,GO:0009288,GO:0009425,GO:0009605,GO:0016020,GO:0040011,GO:0042221,GO:0042330,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0050896,GO:0050918,GO:0071944 ko:K02416 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02035 Bacteria 1MX01@1224,2KV75@206389,2VI0A@28216,COG1868@1,COG1868@2 NA|NA|NA N flagellar motor switch protein HGDHCNMN_02064 62928.azo2724 6.5e-57 226.9 Rhodocyclales fliN GO:0005575,GO:0005623,GO:0005886,GO:0009288,GO:0009425,GO:0016020,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0071944 ko:K02417 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2,3.A.6.3 Bacteria 1RGWT@1224,2KWB5@206389,2VSZ7@28216,COG1886@1,COG1886@2 NA|NA|NA N Flagellar motor switch HGDHCNMN_02066 748247.AZKH_1321 2.8e-22 111.7 Rhodocyclales fliO ko:K02418 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2 Bacteria 1PQ30@1224,2KX1R@206389,2VWHP@28216,COG3190@1,COG3190@2 NA|NA|NA N flagellar HGDHCNMN_02067 305700.B447_18238 7.9e-92 343.6 Rhodocyclales fliP GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02419,ko:K03226 ko02040,ko03070,map02040,map03070 M00332,M00542,M00660 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.6.1,3.A.6.2,3.A.6.3 Bacteria 1MVBU@1224,2KV4G@206389,2VIU6@28216,COG1338@1,COG1338@2 NA|NA|NA N Plays a role in the flagellum-specific transport system HGDHCNMN_02068 85643.Tmz1t_2911 1e-33 149.1 Rhodocyclales fliQ ko:K02420 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2 Bacteria 1N73W@1224,2KX39@206389,2VU8S@28216,COG1987@1,COG1987@2 NA|NA|NA N Role in flagellar biosynthesis HGDHCNMN_02069 85643.Tmz1t_2912 2.8e-76 292.0 Rhodocyclales fliR ko:K02421 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2 Bacteria 1NIF4@1224,2KW6G@206389,2VQ64@28216,COG1684@1,COG1684@2 NA|NA|NA N Role in flagellar biosynthesis HGDHCNMN_02070 522306.CAP2UW1_2212 4.3e-103 382.5 unclassified Betaproteobacteria MA20_35625 2.7.13.3 ko:K02484,ko:K14986 ko02020,map02020 M00524 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1KQTS@119066,1RCM9@1224,2VMUZ@28216,COG2202@1,COG2202@2,COG2203@1,COG2203@2,COG4191@1,COG4191@2 NA|NA|NA T ATP-binding region ATPase domain protein HGDHCNMN_02071 1348657.M622_11680 4.2e-120 438.0 Rhodocyclales rpfG ko:K07814,ko:K13815 ko02020,ko02024,map02020,map02024 M00517 ko00000,ko00001,ko00002,ko02022 Bacteria 1MUB8@1224,2KUVS@206389,2VH1F@28216,COG3437@1,COG3437@2 NA|NA|NA T Metal dependent phosphohydrolases with conserved 'HD' motif. HGDHCNMN_02072 1000565.METUNv1_02115 1.9e-176 626.7 Rhodocyclales 2.7.13.3 ko:K20974 ko02020,ko02025,map02020,map02025 M00820 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1R5EN@1224,2KUNX@206389,2WGK9@28216,COG5002@1,COG5002@2 NA|NA|NA T Histidine Phosphotransfer domain HGDHCNMN_02073 497321.C664_12880 5.1e-55 220.3 Rhodocyclales gloA 4.4.1.5 ko:K01759 ko00620,map00620 R02530 RC00004,RC00740 ko00000,ko00001,ko01000 Bacteria 1RCYX@1224,2KWC1@206389,2VR7R@28216,COG0346@1,COG0346@2 NA|NA|NA E Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione HGDHCNMN_02074 748247.AZKH_3566 2.8e-62 245.4 Rhodocyclales ko:K07043 ko00000 Bacteria 1MXZU@1224,2KWES@206389,2VNC5@28216,COG1451@1,COG1451@2 NA|NA|NA S Protein of unknown function DUF45 HGDHCNMN_02075 76114.ebA1327 2.9e-94 351.7 Rhodocyclales plsC 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1MY51@1224,2KVVS@206389,2VNAX@28216,COG0204@1,COG0204@2 NA|NA|NA I Acyltransferase HGDHCNMN_02076 497321.C664_04562 1e-82 312.8 Rhodocyclales gmhB GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 ko:K03273 ko00540,ko01100,map00540,map01100 M00064 R05647,R09771 RC00017 ko00000,ko00001,ko00002,ko01000,ko01005 iJN746.PP_0059 Bacteria 1RDGR@1224,2KVJN@206389,2VQ49@28216,COG0241@1,COG0241@2 NA|NA|NA E D,D-heptose 1,7-bisphosphate phosphatase HGDHCNMN_02077 497321.C664_04557 2.5e-289 1001.1 Rhodocyclales glyS GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 ko:K01879,ko:K14164 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAPECO1_1312.APECO1_2891,iE2348C_1286.E2348C_3810,iECABU_c1320.ECABU_c40010,iECED1_1282.ECED1_4242,iECH74115_1262.ECH74115_4934,iECNA114_1301.ECNA114_3710,iECOK1_1307.ECOK1_4005,iECP_1309.ECP_3661,iECS88_1305.ECS88_3976,iECSF_1327.ECSF_3393,iECSP_1301.ECSP_4554,iECs_1301.ECs4442,iG2583_1286.G2583_4300,iJN678.glyS,iUMN146_1321.UM146_17960,iUTI89_1310.UTI89_C4099,ic_1306.c4378 Bacteria 1MV2F@1224,2KUWE@206389,2VICG@28216,COG0751@1,COG0751@2 NA|NA|NA J Glycyl-tRNA synthetase beta subunit HGDHCNMN_02078 1123367.C666_07090 2.2e-149 535.0 Rhodocyclales glyQ GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016874,GO:0016875,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 ko:K01878,ko:K14164 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAF1260.b3560,iAF987.Gmet_2942,iJO1366.b3560,iPC815.YPO4072,iY75_1357.Y75_RS19360 Bacteria 1MVCJ@1224,2KUKN@206389,2VIQX@28216,COG0752@1,COG0752@2 NA|NA|NA J glycyl-tRNA synthetase alpha subunit HGDHCNMN_02079 159087.Daro_3112 7.8e-137 494.2 Rhodocyclales ko:K03406,ko:K05875,ko:K05876 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2KUJI@206389,2VGZ8@28216,COG0840@1,COG0840@2,COG4564@1,COG4564@2 NA|NA|NA NT Methyl-accepting chemotaxis protein HGDHCNMN_02080 1454004.AW11_01737 4.3e-294 1017.3 unclassified Betaproteobacteria ctpF GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030312,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.8 ko:K01537,ko:K12953 ko00000,ko01000 3.A.3,3.A.3.2 Bacteria 1KQ71@119066,1MUU5@1224,2VH2F@28216,COG0474@1,COG0474@2 NA|NA|NA P Cation transporter/ATPase, N-terminus HGDHCNMN_02081 1123400.KB904766_gene2937 2.8e-56 224.6 Gammaproteobacteria trpB 4.2.1.20 ko:K01696,ko:K06001 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 Bacteria 1N07Y@1224,1RMGK@1236,COG1350@1,COG1350@2 NA|NA|NA E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine HGDHCNMN_02084 339670.Bamb_4410 1.4e-123 449.9 Burkholderiaceae VP1985 Bacteria 1K3E6@119060,1Q94S@1224,2VIVY@28216,COG0515@1,COG0515@2,COG4886@1,COG4886@2 NA|NA|NA KLT leucine-rich repeat-containing protein typical subtype HGDHCNMN_02085 62928.azo1170 2.4e-104 385.2 Rhodocyclales pdhR ko:K05799 ko00000,ko03000 Bacteria 1MUP9@1224,2KW6U@206389,2VQ0Q@28216,COG2186@1,COG2186@2 NA|NA|NA K COG2186 Transcriptional regulators HGDHCNMN_02086 62928.azo1169 1.9e-128 465.3 Rhodocyclales lutA ko:K18928 ko00000 Bacteria 1MWTK@1224,2KU9S@206389,2VITX@28216,COG0247@1,COG0247@2 NA|NA|NA C Cysteine-rich domain HGDHCNMN_02087 62928.azo1168 1.4e-92 345.9 Rhodocyclales lutC ko:K00782 ko00000 Bacteria 1RJ6A@1224,2KWQE@206389,2VSIZ@28216,COG1556@1,COG1556@2 NA|NA|NA S LUD domain HGDHCNMN_02088 62928.azo1167 2e-245 854.7 Rhodocyclales lutB ko:K18929 ko00000 Bacteria 1MV6J@1224,2KV3H@206389,2VJ3Y@28216,COG1139@1,COG1139@2 NA|NA|NA C Iron-sulfur cluster binding protein HGDHCNMN_02089 62928.azo1166 0.0 1584.3 Rhodocyclales lldE ko:K18930 ko00000 Bacteria 1MU6Y@1224,2KVGQ@206389,2VHCG@28216,COG0247@1,COG0247@2,COG0277@1,COG0277@2,COG0479@1,COG0479@2 NA|NA|NA C FAD linked oxidases, C-terminal domain HGDHCNMN_02090 62928.azo1165 9.2e-271 939.1 Rhodocyclales glcA GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0016020,GO:0022804,GO:0022857,GO:0022890,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 ko:K00427,ko:K02550,ko:K03303 ko00000,ko02000 2.A.14,2.A.14.1.1,2.A.14.1.2 iG2583_1286.G2583_3693,iIT341.HP0140,iIT341.HP0141,iSF_1195.SF3014 Bacteria 1MV13@1224,2KY50@206389,2VHJN@28216,COG1620@1,COG1620@2 NA|NA|NA C L-lactate permease HGDHCNMN_02091 305700.B447_01661 1.2e-85 322.8 Rhodocyclales pepA GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0097718,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1 ko:K01255 ko00480,ko01100,map00480,map01100 R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 Bacteria 1MUF9@1224,2KU6P@206389,2VH79@28216,COG0260@1,COG0260@2 NA|NA|NA E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides HGDHCNMN_02092 1123487.KB892857_gene2275 9.5e-34 149.8 Rhodocyclales holC GO:0005575,GO:0005622,GO:0005623,GO:0006275,GO:0008150,GO:0009314,GO:0009360,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010556,GO:0010557,GO:0010604,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032298,GO:0032991,GO:0042575,GO:0043846,GO:0043847,GO:0044424,GO:0044464,GO:0045740,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0060255,GO:0061695,GO:0065007,GO:0080090,GO:0090329,GO:1902494,GO:1990234,GO:2000105,GO:2000112 2.7.7.7 ko:K02339 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MZ3V@1224,2KX2C@206389,2VTYC@28216,COG2927@1,COG2927@2 NA|NA|NA L DNA polymerase III, chi subunit HGDHCNMN_02093 76114.ebA7176 6.4e-18 97.4 Rhodocyclales Bacteria 1NJ9N@1224,2EUU7@1,2KXM1@206389,2VYWH@28216,33N9T@2 NA|NA|NA HGDHCNMN_02094 640081.Dsui_3539 0.0 1611.3 Rhodocyclales valS GO:0000287,GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006417,GO:0006418,GO:0006438,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0034248,GO:0034250,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045903,GO:0046483,GO:0046872,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0052689,GO:0060255,GO:0061475,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:2000112 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iECH74115_1262.ECH74115_5779,iECNA114_1301.ECNA114_4481,iECO26_1355.ECO26_5428,iECSP_1301.ECSP_5359,iECs_1301.ECs5235,iG2583_1286.G2583_5088,iJN746.PP_0977,iSBO_1134.SBO_4182,iSSON_1240.SSON_4443,iYL1228.KPN_04663,iZ_1308.Z5870 Bacteria 1MV7B@1224,2KVPX@206389,2VH5Z@28216,COG0525@1,COG0525@2 NA|NA|NA J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner HGDHCNMN_02095 497321.C664_13494 7.1e-28 129.4 Rhodocyclales tusA ko:K04085 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Bacteria 1MZA5@1224,2KWXB@206389,2VVW5@28216,COG0425@1,COG0425@2 NA|NA|NA O Belongs to the sulfur carrier protein TusA family HGDHCNMN_02096 1278309.KB907103_gene1158 5e-44 183.7 Oceanospirillales ko:K07131 ko00000 Bacteria 1RIQC@1224,1S65Z@1236,1XJVQ@135619,COG2018@1,COG2018@2 NA|NA|NA S Roadblock/LC7 domain HGDHCNMN_02097 1122244.AUGF01000013_gene453 9.1e-54 216.5 Moraxellaceae ko:K02660,ko:K03406,ko:K03776 ko02020,ko02025,ko02030,map02020,map02025,map02030 ko00000,ko00001,ko02035,ko02044 Bacteria 1MU9B@1224,1RMH0@1236,3NPQ1@468,COG0840@1,COG0840@2 NA|NA|NA NT PAS fold HGDHCNMN_02098 472759.Nhal_2889 6.8e-72 277.3 Chromatiales ko:K02044 ko02010,map02010 M00223 ko00000,ko00001,ko00002,ko02000 3.A.1.9 Bacteria 1MWFF@1224,1SEYJ@1236,1X2JC@135613,COG3221@1,COG3221@2 NA|NA|NA P ABC transporter, phosphonate, periplasmic substrate-binding protein HGDHCNMN_02100 713587.THITH_00875 1.7e-20 107.5 Chromatiales Bacteria 1N58C@1224,1SAPH@1236,1X12X@135613,2DBSQ@1,2ZATE@2 NA|NA|NA HGDHCNMN_02102 472759.Nhal_3340 1.1e-30 140.2 Chromatiales Bacteria 1RHH8@1224,1S827@1236,1X0UX@135613,2AHZA@1,318CM@2 NA|NA|NA HGDHCNMN_02103 748247.AZKH_1640 2.2e-124 452.6 Rhodocyclales bepA GO:0003674,GO:0003756,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016043,GO:0016787,GO:0016853,GO:0016860,GO:0016864,GO:0019538,GO:0022607,GO:0030163,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043163,GO:0043165,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044464,GO:0045229,GO:0046872,GO:0051603,GO:0061024,GO:0061077,GO:0070011,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564,GO:1901565,GO:1901575 Bacteria 1MVFV@1224,2KUIC@206389,2VHAY@28216,COG4783@1,COG4783@2 NA|NA|NA S Peptidase M48 HGDHCNMN_02104 305700.B447_01691 7.3e-59 233.4 Rhodocyclales moaC 4.6.1.17 ko:K03637 ko00790,ko01100,ko04122,map00790,map01100,map04122 R11372 RC03425 ko00000,ko00001,ko01000 Bacteria 1RCYZ@1224,2KW2Z@206389,2VR7B@28216,COG0315@1,COG0315@2 NA|NA|NA H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) HGDHCNMN_02105 1163617.SCD_n02411 2.7e-34 151.8 Betaproteobacteria ko:K17226,ko:K17227 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 Bacteria 1RH4J@1224,2VT8I@28216,COG5501@1,COG5501@2 NA|NA|NA S sulfur oxidation protein SoxY HGDHCNMN_02106 1304883.KI912532_gene3099 2.8e-27 127.9 Rhodocyclales ko:K17226,ko:K17227 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 Bacteria 1N097@1224,2KX4B@206389,2VU95@28216,COG5501@1,COG5501@2 NA|NA|NA S Sulphur oxidation protein SoxZ HGDHCNMN_02107 497321.C664_10173 9.7e-142 510.4 Rhodocyclales ygiF 3.6.1.25,4.6.1.1 ko:K01768,ko:K18446 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 Bacteria 1MY43@1224,2KUDR@206389,2VM3G@28216,COG3025@1,COG3025@2,COG5607@1,COG5607@2 NA|NA|NA S CHAD domain HGDHCNMN_02108 305700.B447_07402 8.1e-60 236.5 Rhodocyclales sixA ko:K08296 ko00000,ko01000 Bacteria 1RIVH@1224,2KWCC@206389,2VSSQ@28216,COG2062@1,COG2062@2 NA|NA|NA T phosphohistidine phosphatase, SixA HGDHCNMN_02109 62928.azo1005 4.3e-197 694.1 Rhodocyclales pntB 1.6.1.2 ko:K00325 ko00760,ko01100,map00760,map01100 R00112 RC00001 ko00000,ko00001,ko01000 Bacteria 1MUP4@1224,2KURP@206389,2VIDR@28216,COG1282@1,COG1282@2 NA|NA|NA C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane HGDHCNMN_02110 640081.Dsui_2936 4.3e-35 153.7 Rhodocyclales pntAB 1.6.1.2 ko:K00324 ko00760,ko01100,map00760,map01100 R00112 RC00001 ko00000,ko00001,ko01000 Bacteria 1N0TD@1224,2KWZH@206389,2WE9I@28216,COG3288@1,COG3288@2 NA|NA|NA C COG3288 NAD NADP transhydrogenase alpha subunit HGDHCNMN_02111 62928.azo1003 1.8e-156 558.9 Rhodocyclales pntAA 1.6.1.2 ko:K00324 ko00760,ko01100,map00760,map01100 R00112 RC00001 ko00000,ko00001,ko01000 Bacteria 1MVXU@1224,2KVAK@206389,2VJZN@28216,COG3288@1,COG3288@2 NA|NA|NA C NAD(P) transhydrogenase, alpha subunit HGDHCNMN_02112 748247.AZKH_1117 7e-126 457.2 Rhodocyclales corA GO:0000041,GO:0000287,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015087,GO:0015095,GO:0015318,GO:0015693,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0046914,GO:0046915,GO:0050897,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0055085,GO:0065003,GO:0070838,GO:0071840,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1903830 ko:K03284 ko00000,ko02000 1.A.35.1,1.A.35.3 Bacteria 1MX09@1224,2KUY9@206389,2VHCH@28216,COG0598@1,COG0598@2 NA|NA|NA P Mediates influx of magnesium ions HGDHCNMN_02113 62928.azo1002 1.7e-95 355.9 Rhodocyclales 3.1.3.16 ko:K01090,ko:K20074 ko00000,ko01000,ko01009 Bacteria 1N72S@1224,2KVCJ@206389,2VK9S@28216,COG0631@1,COG0631@2 NA|NA|NA T phosphatase HGDHCNMN_02114 76114.ebA4492 4.9e-81 307.8 Rhodocyclales glcF ko:K11473 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 R00475 RC00042 ko00000,ko00001 iAPECO1_1312.glcF,iJN678.glcF,iUTI89_1310.glcF,ic_1306.glcF Bacteria 1MWTK@1224,2KUHR@206389,2VISA@28216,COG0247@1,COG0247@2 NA|NA|NA C glycolate oxidase iron-sulfur subunit HGDHCNMN_02116 1168065.DOK_18625 4.1e-66 258.5 unclassified Gammaproteobacteria dyp ko:K07223 ko00000 Bacteria 1J72D@118884,1MWDD@1224,1RMZJ@1236,COG2837@1,COG2837@2 NA|NA|NA P Dyp-type peroxidase family HGDHCNMN_02117 1229780.BN381_500007 1.8e-13 82.0 Actinobacteria Bacteria 2GXRD@201174,COG3668@1,COG3668@2 NA|NA|NA S Plasmid stabilization system HGDHCNMN_02119 1123320.KB889585_gene1873 1.2e-73 284.3 Actinobacteria fadE27 Bacteria 2GK9C@201174,COG1960@1,COG1960@2 NA|NA|NA I acyl-CoA dehydrogenase HGDHCNMN_02120 85643.Tmz1t_3586 1.1e-99 369.4 Rhodocyclales pdxH GO:0003674,GO:0003824,GO:0004733,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.4.3.5 ko:K00275 ko00750,ko01100,ko01120,map00750,map01100,map01120 M00124 R00277,R00278,R01710,R01711 RC00048,RC00116 ko00000,ko00001,ko00002,ko01000 Bacteria 1NZUU@1224,2KWRB@206389,2VIXW@28216,COG0259@1,COG0259@2 NA|NA|NA H Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) HGDHCNMN_02121 426117.M446_6596 9.6e-75 286.6 Methylobacteriaceae paiB ko:K07734 ko00000,ko03000 Bacteria 1JRIU@119045,1N1B9@1224,2U5JV@28211,COG2808@1,COG2808@2 NA|NA|NA K Putative FMN-binding domain HGDHCNMN_02122 349521.HCH_04031 6.8e-32 143.7 Oceanospirillales Bacteria 1N6HR@1224,1SHPM@1236,1XQ3T@135619,2C9QX@1,32U54@2 NA|NA|NA HGDHCNMN_02123 1121035.AUCH01000002_gene1460 7.5e-62 243.8 Rhodocyclales tpm 2.1.1.67 ko:K00569 ko00983,map00983 R08236,R08239,R08246 RC00003,RC00980,RC02277 ko00000,ko00001,ko01000 Bacteria 1QV4X@1224,2KX4K@206389,2WGYG@28216,COG2265@1,COG2265@2 NA|NA|NA J Thiopurine S-methyltransferase (TPMT) HGDHCNMN_02124 290317.Cpha266_1692 1.3e-91 343.2 Bacteria Bacteria 2DW55@1,33YJP@2 NA|NA|NA HGDHCNMN_02125 316057.RPD_2006 2.6e-185 655.6 Alphaproteobacteria 3.4.24.71 ko:K01415,ko:K07386 ko00000,ko01000,ko01002,ko04147 Bacteria 1MVNQ@1224,2TRU4@28211,COG3590@1,COG3590@2 NA|NA|NA O peptidase, M13 HGDHCNMN_02126 640081.Dsui_0634 8.8e-117 426.8 Rhodocyclales ycbK Bacteria 1MYHQ@1224,2KVWH@206389,2VJMU@28216,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family HGDHCNMN_02127 522306.CAP2UW1_1621 5e-122 444.1 unclassified Betaproteobacteria Bacteria 1KQU8@119066,1PG74@1224,2W91F@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HGDHCNMN_02128 946483.Cenrod_1528 7.8e-28 130.2 Comamonadaceae Bacteria 1N6PE@1224,2VQFF@28216,4ADT2@80864,COG3431@1,COG3431@2 NA|NA|NA S PFAM BLUF domain protein HGDHCNMN_02129 402626.Rpic_3584 2.6e-24 118.6 Burkholderiaceae Bacteria 1KDWD@119060,1NPUA@1224,29PWE@1,2VYHX@28216,30AUS@2 NA|NA|NA HGDHCNMN_02131 1123487.KB892834_gene2965 2.1e-143 515.4 Rhodocyclales rhuM Bacteria 1MWKW@1224,2KXZF@206389,2VJ9B@28216,COG3943@1,COG3943@2 NA|NA|NA S Virulence protein RhuM family HGDHCNMN_02132 497321.C664_08358 4.4e-70 271.2 Rhodocyclales gyrB GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 ko:K02470 ko00000,ko01000,ko03032,ko03400 Bacteria 1MVKT@1224,2KUE2@206389,2VI8N@28216,COG0187@1,COG0187@2 NA|NA|NA L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner HGDHCNMN_02133 748247.AZKH_0229 8.5e-137 493.4 Rhodocyclales epd GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019318,GO:0019438,GO:0019637,GO:0034641,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043891,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0048001,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.2.1.12,1.2.1.72 ko:K00134,ko:K03472 ko00010,ko00710,ko00750,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map00750,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00124,M00165,M00166,M00308,M00552 R01061,R01825 RC00149,RC00242 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 iYL1228.KPN_03356 Bacteria 1MU93@1224,2KVAU@206389,2VK9M@28216,COG0057@1,COG0057@2 NA|NA|NA G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family HGDHCNMN_02134 159087.Daro_1407 1.5e-143 515.8 Rhodocyclales Bacteria 1R4ZI@1224,2E2KC@1,2KWU6@206389,2VM8Z@28216,32XPP@2 NA|NA|NA HGDHCNMN_02135 159087.Daro_1408 5.5e-37 161.4 Rhodocyclales Bacteria 1N94K@1224,2KWBP@206389,2VIQ1@28216,COG1413@1,COG1413@2 NA|NA|NA C LRV protein FeS4 cluster HGDHCNMN_02136 1121035.AUCH01000018_gene2754 2.8e-12 77.8 Rhodocyclales Bacteria 1N83W@1224,2E4UR@1,2KXI5@206389,2VYMU@28216,32ZP4@2 NA|NA|NA HGDHCNMN_02137 159087.Daro_1410 7.1e-106 390.2 Rhodocyclales nifY ko:K02585,ko:K02596 ko00000 Bacteria 1PW6J@1224,2KW3D@206389,2WFJ3@28216,COG1433@1,COG1433@2 NA|NA|NA S Dinitrogenase iron-molybdenum cofactor, N-terminal HGDHCNMN_02139 159087.Daro_1411 1.3e-30 138.3 Rhodocyclales fdxN ko:K03522 ko00000,ko04147 Bacteria 1N859@1224,2KZX0@206389,2VXWM@28216,COG1145@1,COG1145@2 NA|NA|NA C 4Fe-4S binding domain HGDHCNMN_02140 159087.Daro_1412 2.7e-32 144.1 Rhodocyclales nifT ko:K02593 ko00000 Bacteria 1N7DQ@1224,2KX5Z@206389,2VW7V@28216,COG5554@1,COG5554@2 NA|NA|NA Q NifT/FixU protein HGDHCNMN_02141 159087.Daro_1413 2.6e-291 1007.3 Rhodocyclales nifK 1.18.6.1 ko:K02591 ko00625,ko00910,ko01100,ko01120,map00625,map00910,map01100,map01120 M00175 R05185,R05496 RC00002,RC01395,RC02891 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWQ4@1224,2KVCW@206389,2VIUM@28216,COG2710@1,COG2710@2 NA|NA|NA C This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation HGDHCNMN_02142 159087.Daro_1414 2e-272 944.5 Rhodocyclales nifD 1.18.6.1 ko:K02586 ko00625,ko00910,ko01100,ko01120,map00625,map00910,map01100,map01120 M00175 R05185,R05496 RC00002,RC01395,RC02891 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVY2@1224,2KVM9@206389,2VHMG@28216,COG2710@1,COG2710@2 NA|NA|NA C Nitrogenase component 1 type Oxidoreductase HGDHCNMN_02143 159087.Daro_1415 1.5e-158 565.5 Rhodocyclales nifH 1.18.6.1 ko:K02588 ko00625,ko00910,ko01100,ko01120,map00625,map00910,map01100,map01120 M00175 R05185,R05496 RC00002,RC01395,RC02891 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVTE@1224,2KUME@206389,2VIK4@28216,COG1348@1,COG1348@2 NA|NA|NA P The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein HGDHCNMN_02144 159087.Daro_1416 3.3e-123 448.0 Rhodocyclales draT 2.4.2.37 ko:K05951 ko00000,ko01000 Bacteria 1R6VB@1224,28IJT@1,2KW0T@206389,2VJQS@28216,2Z8KN@2 NA|NA|NA H Dinitrogenase reductase ADP-ribosyltransferase (DRAT) HGDHCNMN_02146 159087.Daro_1418 3.1e-129 468.0 Rhodocyclales Bacteria 1QCN6@1224,28I9W@1,2KV5B@206389,2VM9W@28216,2Z8CH@2 NA|NA|NA S SIR2-like domain HGDHCNMN_02147 159087.Daro_1419 7.9e-57 226.9 Rhodocyclales Bacteria 1MXFE@1224,297UU@1,2KWQQ@206389,2VIEE@28216,2ZV1D@2 NA|NA|NA HGDHCNMN_02148 159087.Daro_1420 1.7e-47 195.3 Rhodocyclales ko:K07216 ko00000 Bacteria 1MZJ3@1224,2KZ1F@206389,2VVGT@28216,COG2703@1,COG2703@2 NA|NA|NA P PFAM Hemerythrin HHE cation binding domain protein HGDHCNMN_02149 159087.Daro_1447 1.5e-105 389.4 Rhodocyclales draG 3.2.2.24 ko:K05521 ko00000,ko01000 Bacteria 1NTUR@1224,2KVW8@206389,2VM8T@28216,COG1397@1,COG1397@2 NA|NA|NA O ADP-ribosylglycohydrolase HGDHCNMN_02150 159087.Daro_1448 1e-67 263.1 Rhodocyclales nifQ ko:K15790 ko00000 Bacteria 1N15E@1224,2BDS5@1,2KX42@206389,2VUB3@28216,327FW@2 NA|NA|NA S NifQ HGDHCNMN_02151 159087.Daro_1449 4.5e-61 240.4 Rhodocyclales 1.14.14.47 ko:K00491,ko:K02639,ko:K11107 ko00195,ko00220,ko00330,ko01100,ko01110,map00195,map00220,map00330,map01100,map01110 R11711,R11712,R11713 RC00177,RC00330,RC01044 ko00000,ko00001,ko00194,ko01000 Bacteria 1QVJJ@1224,2KZPY@206389,2WGYT@28216,COG1018@1,COG1018@2 NA|NA|NA C 2Fe-2S iron-sulfur cluster binding domain HGDHCNMN_02152 159087.Daro_1450 2e-43 181.4 Rhodocyclales Bacteria 1QVC0@1224,2KX27@206389,2VUDQ@28216,COG1018@1,COG1018@2 NA|NA|NA C 2Fe-2S iron-sulfur cluster binding domain HGDHCNMN_02153 159087.Daro_1451 6.6e-216 756.5 Rhodocyclales fprA1 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0010181,GO:0016491,GO:0016651,GO:0016661,GO:0016662,GO:0016966,GO:0017144,GO:0022900,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0050664,GO:0055114,GO:0072592,GO:0072593,GO:0097159,GO:0097367,GO:1901265,GO:1901363 1.6.3.4 ko:K22405 ko00000,ko01000 Bacteria 1NDXY@1224,2KW04@206389,2VKXD@28216,COG0426@1,COG0426@2 NA|NA|NA C Metallo-beta-lactamase superfamily HGDHCNMN_02154 159087.Daro_1452 1.1e-48 199.9 Rhodocyclales 1.20.4.1,3.2.2.24 ko:K00537,ko:K05521 ko00000,ko01000 Bacteria 1MZ7Z@1224,2KX0K@206389,2VT4B@28216,COG1393@1,COG1393@2 NA|NA|NA P ArsC family HGDHCNMN_02155 159087.Daro_1453 2.6e-45 187.6 Rhodocyclales fdxN ko:K03522 ko00000,ko04147 Bacteria 1MZ6H@1224,2KX5U@206389,2VW4D@28216,COG1145@1,COG1145@2 NA|NA|NA C 4Fe-4S binding domain HGDHCNMN_02156 159087.Daro_1454 3.9e-268 930.2 Rhodocyclales nifB ko:K02585,ko:K02592,ko:K02596 ko00000 Bacteria 1MWDC@1224,2KV00@206389,2VJBQ@28216,COG0535@1,COG0535@2,COG1433@1,COG1433@2 NA|NA|NA C Dinitrogenase iron-molybdenum cofactor HGDHCNMN_02157 365044.Pnap_2641 4e-97 361.3 Comamonadaceae MA20_09270 2.7.13.1,2.7.13.3 ko:K05962,ko:K07675 ko02020,map02020 M00473 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MWPN@1224,2VQ79@28216,4AI92@80864,COG4585@1,COG4585@2 NA|NA|NA T PFAM ATP-binding region, ATPase domain protein domain protein HGDHCNMN_02158 748247.AZKH_p0106 2.1e-90 338.6 Rhodocyclales ko:K02282,ko:K07689 ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111 M00475 ko00000,ko00001,ko00002,ko02022,ko02035,ko02044 Bacteria 1MWGM@1224,2KY87@206389,2VSR6@28216,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon HGDHCNMN_02159 1286631.X805_28610 4.9e-49 200.7 Betaproteobacteria Bacteria 1RGY6@1224,2W33U@28216,COG1917@1,COG1917@2 NA|NA|NA S Cupin 2, conserved barrel domain protein HGDHCNMN_02160 1000565.METUNv1_01048 1.3e-35 157.1 Bacteria ko:K07126 ko00000 Bacteria COG0790@1,COG0790@2 NA|NA|NA S beta-lactamase activity HGDHCNMN_02161 535289.Dtpsy_2684 7.6e-46 190.3 Comamonadaceae ko:K03562 ko01120,map01120 ko00000,ko02000 1.A.30.2.2 Bacteria 1RJQC@1224,2VT8B@28216,4AEXF@80864,COG0811@1,COG0811@2 NA|NA|NA U MotA/TolQ/ExbB proton channel family HGDHCNMN_02162 305700.B447_14294 8.4e-27 126.3 Rhodocyclales Bacteria 1N1J3@1224,2KWZA@206389,2VU81@28216,COG4744@1,COG4744@2 NA|NA|NA S Uncharacterized conserved protein (DUF2149) HGDHCNMN_02163 1123487.KB892838_gene3885 1.1e-66 261.5 Rhodocyclales Bacteria 1NRP8@1224,2KW4J@206389,2VPUH@28216,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_02164 857087.Metme_1569 7.9e-24 117.1 Methylococcales vhtD 3.4.23.51 ko:K03605,ko:K04656,ko:K08315 ko00000,ko01000,ko01002 Bacteria 1NC1J@1224,1SIGX@1236,1XFTC@135618,COG0680@1,COG0680@2 NA|NA|NA C PFAM Peptidase A31, hydrogen uptake protein HGDHCNMN_02165 395495.Lcho_1348 7.7e-187 660.2 unclassified Burkholderiales hupL 1.12.99.6 ko:K06281 ko00633,ko01120,map00633,map01120 R08034 RC00250 ko00000,ko00001,ko01000 Bacteria 1KIZV@119065,1MWFJ@1224,2VKZS@28216,COG0374@1,COG0374@2 NA|NA|NA C Nickel-dependent hydrogenase HGDHCNMN_02166 697282.Mettu_0626 2.5e-127 461.8 Methylococcales hybA 1.12.99.6 ko:K06282 ko00633,ko01120,map00633,map01120 R08034 RC00250 ko00000,ko00001,ko01000 Bacteria 1MWAC@1224,1RMPB@1236,1XEVF@135618,COG1740@1,COG1740@2 NA|NA|NA C PFAM NADH ubiquinone HGDHCNMN_02167 1216976.AX27061_0362 1.1e-33 149.4 Alcaligenaceae ko:K09959 ko00000 Bacteria 1RGYH@1224,2VSRW@28216,3T7C1@506,COG3564@1,COG3564@2 NA|NA|NA S Protein of unknown function (DUF779) HGDHCNMN_02168 1121035.AUCH01000014_gene2357 1.2e-264 918.7 Rhodocyclales aldA 1.2.1.3 ko:K00128,ko:K00138,ko:K18370 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00640,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00640,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00711,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146,R10703 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00545,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU1V@1224,2KUIG@206389,2VHNV@28216,COG1012@1,COG1012@2 NA|NA|NA C belongs to the aldehyde dehydrogenase family HGDHCNMN_02169 76114.ebA3176 1.4e-49 202.6 Rhodocyclales ko:K21572 ko00000,ko02000 8.A.46.1,8.A.46.3 Bacteria 1RBY9@1224,2KWQU@206389,2VSW7@28216,COG2913@1,COG2913@2 NA|NA|NA J (Lipo)protein HGDHCNMN_02170 748247.AZKH_4396 9.4e-150 536.6 Rhodocyclales ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MWJ1@1224,2KUCW@206389,2VH55@28216,COG0683@1,COG0683@2 NA|NA|NA E Leucine-specific binding protein HGDHCNMN_02171 85643.Tmz1t_2471 7.9e-149 533.5 Rhodocyclales ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MWJ1@1224,2KV07@206389,2VH55@28216,COG0683@1,COG0683@2 NA|NA|NA E amino acid HGDHCNMN_02187 156889.Mmc1_2180 4.9e-84 319.3 Proteobacteria ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 Bacteria 1MWCJ@1224,COG1538@1,COG1538@2 NA|NA|NA MU type I secretion outer membrane protein, TolC HGDHCNMN_02191 305700.B447_04003 2e-17 95.1 Rhodocyclales Bacteria 1NFTT@1224,2EDQN@1,2KX90@206389,2VX5I@28216,337KA@2 NA|NA|NA HGDHCNMN_02194 1000565.METUNv1_00341 1.6e-155 556.2 Rhodocyclales 2.7.13.3 ko:K07675 ko02020,map02020 M00473 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MWPN@1224,2KWH2@206389,2VJV5@28216,COG2204@1,COG2204@2,COG4585@1,COG4585@2 NA|NA|NA T Histidine kinase HGDHCNMN_02195 1123487.KB892856_gene2554 1.1e-91 342.8 Rhodocyclales ko:K02282,ko:K07689 ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111 M00475 ko00000,ko00001,ko00002,ko02022,ko02035,ko02044 Bacteria 1MWGM@1224,2KW43@206389,2VQ9H@28216,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon HGDHCNMN_02196 62928.azo2691 6.2e-164 584.3 Rhodocyclales 2.7.7.65 ko:K13590 ko04112,map04112 ko00000,ko00001,ko01000 Bacteria 1MXAW@1224,2KUEF@206389,2VK79@28216,COG2199@1,COG3706@2 NA|NA|NA T GGDEF domain HGDHCNMN_02198 85643.Tmz1t_0883 9.2e-55 221.1 Rhodocyclales Bacteria 1MYVS@1224,2DM3R@1,2KWSI@206389,2VTP5@28216,31KU1@2 NA|NA|NA HGDHCNMN_02199 1349767.GJA_2101 6.6e-43 181.0 Betaproteobacteria ko:K02456,ko:K02457,ko:K02458,ko:K10924,ko:K12285 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1RIBU@1224,2WFDS@28216,COG2165@1,COG2165@2 NA|NA|NA U Prokaryotic N-terminal methylation motif HGDHCNMN_02200 1123487.KB892846_gene573 3.4e-90 339.0 Rhodocyclales GO:0000287,GO:0003674,GO:0003824,GO:0004016,GO:0004383,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006182,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0007189,GO:0008074,GO:0008150,GO:0008152,GO:0008179,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0010033,GO:0014070,GO:0016020,GO:0016021,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019899,GO:0019932,GO:0019933,GO:0019935,GO:0023052,GO:0030145,GO:0030425,GO:0031224,GO:0031226,GO:0031683,GO:0032991,GO:0033993,GO:0034641,GO:0034654,GO:0035556,GO:0035690,GO:0036477,GO:0042221,GO:0042493,GO:0042995,GO:0043005,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044444,GO:0044445,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045121,GO:0046058,GO:0046068,GO:0046390,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0046982,GO:0046983,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052652,GO:0055086,GO:0061478,GO:0065007,GO:0070887,GO:0071236,GO:0071310,GO:0071396,GO:0071407,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097305,GO:0097306,GO:0097447,GO:0097458,GO:0098589,GO:0098805,GO:0098857,GO:0120025,GO:0120038,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1904321,GO:1904322 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 Bacteria 1QWNC@1224,2KUEJ@206389,2VHX9@28216,COG2114@1,COG2114@2 NA|NA|NA T Adenylyl- / guanylyl cyclase, catalytic domain HGDHCNMN_02201 1123487.KB892839_gene219 6.1e-61 240.7 Rhodocyclales ko:K02456 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1REMT@1224,2KWCN@206389,2VR8U@28216,COG2165@1,COG2165@2 NA|NA|NA NU Prokaryotic N-terminal methylation motif HGDHCNMN_02202 62928.azo0795 2e-235 822.0 Rhodocyclales kefB ko:K03455 ko00000 2.A.37 Bacteria 1MV34@1224,2KUCM@206389,2VHQQ@28216,COG0475@1,COG0475@2,COG1226@1,COG1226@2 NA|NA|NA P Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family HGDHCNMN_02203 748247.AZKH_0742 2.1e-124 452.2 Rhodocyclales kdsD GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0019146,GO:0019294,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0046364,GO:0046394,GO:0046400,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.3.1.13 ko:K06041 ko00540,ko01100,map00540,map01100 M00063 R01530 RC00541 ko00000,ko00001,ko00002,ko01000,ko01005 iECH74115_1262.ECH74115_4519,iECSP_1301.ECSP_4172,iECs_1301.ECs4076,iPC815.YPO3577,iSFV_1184.SFV_3227,iSFxv_1172.SFxv_3550,iYL1228.KPN_03607,iZ_1308.Z4560 Bacteria 1MUXD@1224,2KV61@206389,2VI24@28216,COG0517@1,COG0517@2,COG0794@1,COG0794@2 NA|NA|NA M Belongs to the SIS family. GutQ KpsF subfamily HGDHCNMN_02204 748247.AZKH_0741 2.3e-30 139.0 Rhodocyclales lptC GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0017089,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 ko:K02040,ko:K11719 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 ko00000,ko00001,ko00002,ko02000 1.B.42.1,3.A.1.7 iB21_1397.B21_03015,iECBD_1354.ECBD_0543,iECB_1328.ECB_03064,iECD_1391.ECD_03064 Bacteria 1R5UK@1224,2KWYG@206389,2VU37@28216,COG3117@1,COG3117@2 NA|NA|NA S Lipopolysaccharide-assembly, LptC-related HGDHCNMN_02205 1000565.METUNv1_00097 6.3e-54 217.2 Rhodocyclales lptA GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009279,GO:0010876,GO:0015920,GO:0016020,GO:0017089,GO:0019867,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044462,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 ko:K09774 ko00000,ko02000 1.B.42.1 iB21_1397.B21_03016,iECBD_1354.ECBD_0542,iECB_1328.ECB_03065,iECD_1391.ECD_03065 Bacteria 1N776@1224,2KWMF@206389,2VSI4@28216,COG1934@1,COG1934@2 NA|NA|NA S Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane HGDHCNMN_02206 1348657.M622_04340 4.7e-57 227.6 Rhodocyclales phaP Bacteria 1R4SV@1224,2KW96@206389,2VQP2@28216,COG5490@1,COG5490@2 NA|NA|NA S Phasin protein HGDHCNMN_02207 1304883.KI912532_gene3125 0.0 1328.5 Rhodocyclales icd 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1MV6Q@1224,2KVSH@206389,2VI36@28216,COG2838@1,COG2838@2 NA|NA|NA C Isocitrate dehydrogenase HGDHCNMN_02208 1095769.CAHF01000011_gene2467 1.6e-216 759.6 Bacteria Bacteria COG2267@1,COG2267@2 NA|NA|NA I carboxylic ester hydrolase activity HGDHCNMN_02209 85643.Tmz1t_1260 1e-283 982.2 Rhodocyclales aceK GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004721,GO:0004722,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008772,GO:0009060,GO:0009987,GO:0015980,GO:0016208,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0016999,GO:0017076,GO:0017144,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0036211,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046487,GO:0050790,GO:0055114,GO:0065007,GO:0065009,GO:0070262,GO:0071704,GO:0072350,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.11.5 ko:K00906 ko00000,ko01000 Bacteria 1MVRB@1224,2KUNY@206389,2VJMA@28216,COG4579@1,COG4579@2 NA|NA|NA F Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation HGDHCNMN_02210 279714.FuraDRAFT_1370 3.4e-217 760.8 Neisseriales icd GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 iJN746.PP_4011 Bacteria 1MW3J@1224,2KPCS@206351,2VHVD@28216,COG0538@1,COG0538@2 NA|NA|NA C Isocitrate/isopropylmalate dehydrogenase HGDHCNMN_02211 748247.AZKH_1224 1.7e-51 208.8 Rhodocyclales Bacteria 1NAWC@1224,2KZ3Q@206389,2VVCQ@28216,COG1051@1,COG1051@2 NA|NA|NA F NUDIX domain HGDHCNMN_02212 62928.azo1139 1.3e-65 255.8 Rhodocyclales dut GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 ko:K01520,ko:K13038 ko00240,ko00770,ko00983,ko01100,map00240,map00770,map00983,map01100 M00053,M00120 R02100,R03269,R04231,R11896 RC00002,RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1RA7P@1224,2KWAF@206389,2VQ5I@28216,COG0756@1,COG0756@2 NA|NA|NA F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA HGDHCNMN_02213 748247.AZKH_1222 5.1e-178 630.6 Rhodocyclales coaBC 4.1.1.36,6.3.2.5 ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVQP@1224,2KURK@206389,2VI4X@28216,COG0452@1,COG0452@2 NA|NA|NA H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine HGDHCNMN_02214 748247.AZKH_1221 6e-91 340.5 Rhodocyclales radC ko:K03630 ko00000 Bacteria 1MXZ5@1224,2KUXZ@206389,2VKTW@28216,COG2003@1,COG2003@2 NA|NA|NA E Belongs to the UPF0758 family HGDHCNMN_02215 76114.ebA4482 1.2e-33 148.7 Rhodocyclales rpmB GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02902 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZ57@1224,2KWVC@206389,2VU1B@28216,COG0227@1,COG0227@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL28 family HGDHCNMN_02216 748247.AZKH_1219 1.4e-22 111.3 Rhodocyclales rpmG GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02913 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1N6QV@1224,2KXDQ@206389,2VVW8@28216,COG0267@1,COG0267@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL33 family HGDHCNMN_02217 85643.Tmz1t_1251 1.1e-29 135.2 Rhodocyclales scoF ko:K03704 ko00000,ko03000 Bacteria 1N6Q5@1224,2KWX9@206389,2VVTG@28216,COG1278@1,COG1278@2 NA|NA|NA K Cold shock HGDHCNMN_02218 76114.ebD83 5.9e-41 173.3 Rhodocyclales clpS GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 ko:K06891 ko00000 Bacteria 1MZU8@1224,2KWPQ@206389,2VSCU@28216,COG2127@1,COG2127@2 NA|NA|NA S Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation HGDHCNMN_02219 497321.C664_10008 0.0 1315.4 Rhodocyclales clpA GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 ko:K03694 ko00000,ko03110 Bacteria 1MV8B@1224,2KUE7@206389,2VH1K@28216,COG0542@1,COG0542@2 NA|NA|NA O Belongs to the ClpA ClpB family HGDHCNMN_02220 62928.azo1130 1e-65 256.1 Rhodocyclales rraA ko:K02553 ko00000,ko03019 Bacteria 1RH18@1224,2KW8N@206389,2VR2C@28216,COG0684@1,COG0684@2 NA|NA|NA H Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions HGDHCNMN_02221 748247.AZKH_1214 8.5e-251 872.5 Rhodocyclales aceA GO:0001101,GO:0001666,GO:0003674,GO:0003824,GO:0004451,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0006102,GO:0006950,GO:0008150,GO:0008152,GO:0009268,GO:0009405,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0010033,GO:0010034,GO:0010447,GO:0016020,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0019899,GO:0032787,GO:0033554,GO:0033993,GO:0035375,GO:0036293,GO:0036294,GO:0042221,GO:0043167,GO:0043169,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046421,GO:0046487,GO:0046677,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0070482,GO:0070542,GO:0070887,GO:0071453,GO:0071456,GO:0071704,GO:0071944,GO:0072350,GO:0075136,GO:0075141,GO:1901700 4.1.3.1 ko:K01637 ko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200 M00012 R00479 RC00311,RC00313 ko00000,ko00001,ko00002,ko01000 e_coli_core.b4015,iAF1260.b4015,iB21_1397.B21_03847,iBWG_1329.BWG_3671,iE2348C_1286.E2348C_4318,iEC042_1314.EC042_4377,iEC55989_1330.EC55989_4500,iECABU_c1320.ECABU_c45310,iECBD_1354.ECBD_4022,iECB_1328.ECB_03887,iECDH10B_1368.ECDH10B_4204,iECDH1ME8569_1439.ECDH1ME8569_3871,iECD_1391.ECD_03887,iECED1_1282.ECED1_4722,iECIAI1_1343.ECIAI1_4235,iECIAI39_1322.ECIAI39_4401,iECNA114_1301.ECNA114_4164,iECO103_1326.ECO103_4759,iECO111_1330.ECO111_4827,iECO26_1355.ECO26_5119,iECP_1309.ECP_4225,iECSE_1348.ECSE_4300,iECSF_1327.ECSF_3865,iECUMN_1333.ECUMN_4541,iECW_1372.ECW_m4374,iEKO11_1354.EKO11_4310,iETEC_1333.ETEC_4270,iEcDH1_1363.EcDH1_3982,iEcE24377_1341.EcE24377A_4557,iEcHS_1320.EcHS_A4249,iEcSMS35_1347.EcSMS35_4469,iEcolC_1368.EcolC_4015,iJN746.PP_4116,iJO1366.b4015,iJR904.b4015,iLF82_1304.LF82_0012,iNRG857_1313.NRG857_20015,iSDY_1059.SDY_4328,iUMNK88_1353.UMNK88_4859,iWFL_1372.ECW_m4374,iY75_1357.Y75_RS20880 Bacteria 1MWIF@1224,2KUZG@206389,2VHWS@28216,COG2224@1,COG2224@2 NA|NA|NA C Isocitrate lyase HGDHCNMN_02222 62928.azo2752 5.8e-99 367.5 Rhodocyclales ko:K15270 ko00000,ko02000 2.A.7.3.7 Bacteria 1MZXM@1224,2KW2D@206389,2VK90@28216,COG0697@1,COG0697@2 NA|NA|NA EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily HGDHCNMN_02223 1304883.KI912532_gene3061 2e-40 171.8 Rhodocyclales Bacteria 1N1WF@1224,2CU7M@1,2KWRI@206389,2VUS0@28216,32SUS@2 NA|NA|NA S SpoIIAA-like HGDHCNMN_02224 62928.azo2754 7.6e-107 393.7 Rhodocyclales sseA 2.8.1.1,2.8.1.2 ko:K01011 ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122 R01931,R03105,R03106 RC00214 ko00000,ko00001,ko01000 Bacteria 1MW4B@1224,2KVPB@206389,2VHAX@28216,COG2897@1,COG2897@2 NA|NA|NA P Rhodanese Homology Domain HGDHCNMN_02225 159087.Daro_1515 1.4e-215 755.4 Rhodocyclales nifS 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Bacteria 1MU1C@1224,2KVVM@206389,2VNE4@28216,COG1104@1,COG1104@2 NA|NA|NA E Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine HGDHCNMN_02226 159087.Daro_1514 3.5e-147 527.7 Rhodocyclales nifU 2.8.1.13 ko:K00566,ko:K04488,ko:K07126,ko:K13819 ko04122,map04122 R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 Bacteria 1RD5K@1224,2KVIQ@206389,2VJE9@28216,COG0694@1,COG0694@2,COG0822@1,COG0822@2 NA|NA|NA CO May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins HGDHCNMN_02227 159087.Daro_1513 9.2e-50 202.6 Rhodocyclales hesB ko:K13628 ko00000,ko03016 Bacteria 1MZTE@1224,2KX3G@206389,2VUJT@28216,COG0316@1,COG0316@2 NA|NA|NA S Iron-sulphur cluster biosynthesis HGDHCNMN_02228 748247.AZKH_p0091 1.8e-98 365.9 Rhodocyclales Bacteria 1MUNN@1224,2M001@206389,2VKER@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HGDHCNMN_02229 748247.AZKH_p0090 6.5e-51 207.2 Rhodocyclales ko:K07006 ko00000 Bacteria 1NBWC@1224,2KZZE@206389,2VKQ8@28216,COG3576@1,COG3576@2 NA|NA|NA S Pyridoxamine 5'-phosphate oxidase HGDHCNMN_02230 748247.AZKH_p0089 1.8e-91 342.0 Betaproteobacteria 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 Bacteria 1MWY4@1224,2VQER@28216,COG0625@1,COG0625@2 NA|NA|NA O Glutathione S-transferase HGDHCNMN_02231 159087.Daro_1512 2.6e-52 211.5 Proteobacteria Bacteria 1RITE@1224,2BAEQ@1,323V5@2 NA|NA|NA HGDHCNMN_02232 159087.Daro_1511 2.7e-37 161.4 Rhodocyclales Bacteria 1QD6K@1224,2EBC7@1,2KZ6T@206389,2W87P@28216,31FK2@2 NA|NA|NA HGDHCNMN_02233 159087.Daro_1510 1.7e-28 131.7 Rhodocyclales frx-1 Bacteria 1QWGB@1224,2KZPZ@206389,2WGYU@28216,COG1148@1,COG1148@2 NA|NA|NA C 4Fe-4S dicluster domain HGDHCNMN_02234 159087.Daro_1509 1.8e-25 121.3 Rhodocyclales Bacteria 1QWGA@1224,2DQ5Y@1,2KXG1@206389,2VWW1@28216,334WI@2 NA|NA|NA S Rop-like HGDHCNMN_02235 159087.Daro_1508 1.5e-72 278.9 Rhodocyclales Bacteria 1RABM@1224,2DBX8@1,2KWCX@206389,2VQYS@28216,2ZBN7@2 NA|NA|NA S Protein of unknown function, DUF269 HGDHCNMN_02236 159087.Daro_1507 1.4e-25 122.9 Bacteria rseC GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0016020,GO:0044464,GO:0050896,GO:0071944 ko:K03803 ko00000,ko03021 Bacteria COG3086@1,COG3086@2 NA|NA|NA T response to oxidative stress HGDHCNMN_02237 159087.Daro_1506 2.2e-63 248.4 Rhodocyclales ko:K02585,ko:K02596 ko00000 Bacteria 1RD9P@1224,2KX3E@206389,2VUUQ@28216,COG1433@1,COG1433@2 NA|NA|NA S Dinitrogenase iron-molybdenum cofactor HGDHCNMN_02238 159087.Daro_1505 4.4e-221 773.9 Rhodocyclales nifN ko:K02587,ko:K02592 ko00000 Bacteria 1MWSX@1224,2KV3F@206389,2VJNA@28216,COG2710@1,COG2710@2 NA|NA|NA C Nitrogenase component 1 type Oxidoreductase HGDHCNMN_02239 159087.Daro_1501 4.2e-256 890.2 Rhodocyclales nifN ko:K02587,ko:K02592 ko00000 Bacteria 1MWAJ@1224,2KVBY@206389,2VJ11@28216,COG2710@1,COG2710@2 NA|NA|NA C Nitrogenase component 1 type Oxidoreductase HGDHCNMN_02240 1304883.KI912532_gene2256 7e-200 703.4 Rhodocyclales Bacteria 1PUZK@1224,2KYH0@206389,2VKEF@28216,COG1055@1,COG1055@2 NA|NA|NA P Involved in arsenical resistance. Thought to form the channel of an arsenite pump HGDHCNMN_02241 159087.Daro_1496 5.5e-32 143.3 Rhodocyclales rnfH GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0055114 ko:K09801 ko00000 Bacteria 1MZCH@1224,2KX1W@206389,2VU9E@28216,COG2914@1,COG2914@2 NA|NA|NA S RnfH family Ubiquitin HGDHCNMN_02242 1121035.AUCH01000016_gene2162 2.5e-89 335.1 Rhodocyclales rnfE ko:K03613 ko00000 Bacteria 1MW6N@1224,2KVHC@206389,2VJ7M@28216,COG4660@1,COG4660@2 NA|NA|NA C Part of a membrane complex involved in electron transport HGDHCNMN_02243 76114.ebA2581 1.1e-64 253.1 Rhodocyclales rnfG GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03612 ko00000 Bacteria 1RDEP@1224,2KWMQ@206389,2VS0E@28216,COG4659@1,COG4659@2 NA|NA|NA C Part of a membrane complex involved in electron transport HGDHCNMN_02244 1121035.AUCH01000016_gene2164 2.6e-144 518.5 Rhodocyclales rnfD 1.6.5.8 ko:K00347,ko:K03614 ko00000,ko01000 Bacteria 1MVY6@1224,2KVVJ@206389,2VKUY@28216,COG4658@1,COG4658@2 NA|NA|NA C Part of a membrane complex involved in electron transport HGDHCNMN_02245 1121035.AUCH01000016_gene2165 2.8e-173 615.1 Rhodocyclales rnfC ko:K03615 ko00000 Bacteria 1QD61@1224,2KV7Y@206389,2VJTD@28216,COG4656@1,COG4656@2 NA|NA|NA C Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily HGDHCNMN_02246 1121035.AUCH01000016_gene2166 2.2e-61 241.9 Rhodocyclales ko:K03616 ko00000 Bacteria 1RE44@1224,2KWC7@206389,2VR3H@28216,COG2878@1,COG2878@2 NA|NA|NA C Part of a membrane complex involved in electron transport HGDHCNMN_02247 1121035.AUCH01000016_gene2167 1.6e-76 292.4 Rhodocyclales rnfA ko:K03617 ko00000 Bacteria 1MU8X@1224,2KW8X@206389,2VKQN@28216,COG4657@1,COG4657@2 NA|NA|NA C Part of a membrane complex involved in electron transport HGDHCNMN_02248 159087.Daro_1488 2e-203 715.3 Rhodocyclales nifL 2.7.13.1 ko:K05962 ko00000,ko01000 Bacteria 1MXRR@1224,2KV9C@206389,2VN7B@28216,COG3829@1,COG3829@2,COG4191@1,COG4191@2 NA|NA|NA T Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) HGDHCNMN_02249 159087.Daro_1487 1.4e-128 466.1 Rhodocyclales nifA ko:K02584 ko02020,map02020 ko00000,ko00001,ko03000 Bacteria 1QTT3@1224,2KU7Y@206389,2VKXT@28216,COG3604@1,COG3604@2 NA|NA|NA KT Domain present in phytochromes and cGMP-specific phosphodiesterases. HGDHCNMN_02251 62928.azo3424 3.4e-237 827.4 Rhodocyclales rpoB GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 ko:K03043,ko:K13797 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1MUC4@1224,2KV0Q@206389,2VHF3@28216,COG0085@1,COG0085@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates HGDHCNMN_02252 62928.azo3423 0.0 2469.5 Rhodocyclales rpoC GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 ko:K03046,ko:K13797 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1MU3M@1224,2KUZA@206389,2VIF3@28216,COG0086@1,COG0086@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates HGDHCNMN_02253 1123487.KB892855_gene2560 1.2e-61 242.3 Rhodocyclales rpsL GO:0000372,GO:0000375,GO:0000376,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015935,GO:0016070,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0031323,GO:0031325,GO:0032991,GO:0033120,GO:0034336,GO:0034337,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043484,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 ko:K02950 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RCWY@1224,2KW8M@206389,2VR2H@28216,COG0048@1,COG0048@2 NA|NA|NA J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit HGDHCNMN_02254 305700.B447_20261 3.4e-69 267.7 Rhodocyclales rpsG GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02992 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MXC8@1224,2KVWF@206389,2VQ63@28216,COG0049@1,COG0049@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA HGDHCNMN_02255 1123367.C666_15850 0.0 1276.2 Rhodocyclales fusA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 ko:K02355 ko00000,ko03012,ko03029 Bacteria 1MUCV@1224,2KUP0@206389,2VI3Q@28216,COG0480@1,COG0480@2 NA|NA|NA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome HGDHCNMN_02256 1240350.AMZE01000001_gene2871 3e-20 104.4 Pseudomonas putida group Bacteria 1MWN6@1224,1RT6J@1236,1YXZD@136845,COG2890@1,COG2890@2 NA|NA|NA J Methyltransferase domain HGDHCNMN_02257 748247.AZKH_1075 1.1e-63 250.0 Rhodocyclales 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1R9ZV@1224,2KW3P@206389,2VQ55@28216,COG0265@1,COG0265@2 NA|NA|NA O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain HGDHCNMN_02258 85643.Tmz1t_3207 0.0 1543.5 Rhodocyclales gcvP GO:0003674,GO:0003824,GO:0004375,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016638,GO:0016642,GO:0030312,GO:0040007,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 1.4.4.2 ko:K00281,ko:K00282 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko00002,ko01000 iECIAI39_1322.ECIAI39_3318 Bacteria 1MUDP@1224,2KUZT@206389,2VHQ6@28216,COG0403@1,COG0403@2,COG1003@1,COG1003@2 NA|NA|NA E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor HGDHCNMN_02259 305700.B447_20388 1e-47 196.1 Rhodocyclales gcvH GO:0001505,GO:0003674,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0017144,GO:0019464,GO:0019752,GO:0031405,GO:0031406,GO:0033293,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901681 ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221 RC00022,RC02834 ko00000,ko00001,ko00002 iE2348C_1286.E2348C_3156,iPC815.YPO0906 Bacteria 1RGV7@1224,2KWQ0@206389,2VSD7@28216,COG0509@1,COG0509@2 NA|NA|NA E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein HGDHCNMN_02260 76114.ebA6126 9.7e-160 569.7 Rhodocyclales gcvT GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R01221,R02300,R04125 RC00022,RC00069,RC00183,RC02834 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV96@1224,2KVBK@206389,2VIT9@28216,COG0404@1,COG0404@2 NA|NA|NA E The glycine cleavage system catalyzes the degradation of glycine HGDHCNMN_02261 62928.azo2116 1.2e-115 422.9 Rhodocyclales Bacteria 1QTAP@1224,2KVW6@206389,2VMEV@28216,COG2267@1,COG2267@2 NA|NA|NA I Alpha beta hydrolase HGDHCNMN_02262 1123487.KB892836_gene3129 1.1e-102 379.8 Rhodocyclales trpH GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004534,GO:0004536,GO:0004540,GO:0005488,GO:0006139,GO:0006259,GO:0006521,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008409,GO:0009987,GO:0010565,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016796,GO:0016895,GO:0016896,GO:0019222,GO:0030145,GO:0031323,GO:0033238,GO:0034641,GO:0035312,GO:0042578,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0090357,GO:0090501,GO:0090503,GO:0097657,GO:0140097,GO:0140098,GO:1901360 3.1.3.97 ko:K07053 R00188,R11188 RC00078 ko00000,ko01000 Bacteria 1MWIH@1224,2KUXV@206389,2VHB2@28216,COG0613@1,COG0613@2 NA|NA|NA S metal-dependent phosphoesterases (PHP family) HGDHCNMN_02263 62928.azo2114 6.3e-95 353.6 Rhodocyclales yciO GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.7.87 ko:K07566 R10463 RC00745 ko00000,ko01000,ko03009,ko03016 Bacteria 1MVPM@1224,2KUMD@206389,2VH4T@28216,COG0009@1,COG0009@2 NA|NA|NA J Belongs to the SUA5 family HGDHCNMN_02264 497321.C664_12365 1.3e-87 329.3 Rhodocyclales ywhC ko:K06402 ko00000,ko01000,ko01002 Bacteria 1NSFF@1224,2KVFM@206389,2VHAM@28216,COG1994@1,COG1994@2 NA|NA|NA S Peptidase M50 HGDHCNMN_02265 748247.AZKH_2245 1.8e-194 685.3 Rhodocyclales trpS GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1MV4T@1224,2KV1Z@206389,2VIEY@28216,COG0180@1,COG0180@2 NA|NA|NA J tRNA synthetases class I (W and Y) HGDHCNMN_02266 85643.Tmz1t_1687 1.2e-106 392.9 Rhodocyclales scpA ko:K05896 ko00000,ko03036 Bacteria 1MVCN@1224,2KU7P@206389,2VKE7@28216,COG1354@1,COG1354@2 NA|NA|NA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves HGDHCNMN_02267 748247.AZKH_2247 1.9e-77 295.4 Rhodocyclales scpB GO:0003674,GO:0005488,GO:0005515,GO:0042802 ko:K06024 ko00000,ko03036 Bacteria 1PUA6@1224,2KW8D@206389,2VKIN@28216,COG1386@1,COG1386@2 NA|NA|NA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves HGDHCNMN_02268 1120999.JONM01000029_gene3353 1.1e-12 80.9 Neisseriales Bacteria 1Q0ZK@1224,2AID7@1,2KTI3@206351,2W5XD@28216,318UJ@2 NA|NA|NA HGDHCNMN_02273 910474.E5E3U7_9CAUD 1.7e-13 82.4 Myoviridae Viruses 4QGSB@10239,4QJVK@10662,4QU41@28883,4QVSX@35237 NA|NA|NA S Phage P2 GpE HGDHCNMN_02274 634500.EbC_11120 6.7e-70 272.3 Erwinia Bacteria 1NFKU@1224,1RP2D@1236,3X5VX@551,COG5283@1,COG5283@2 NA|NA|NA S Phage-related minor tail protein HGDHCNMN_02275 1149133.ppKF707_3081 1.6e-17 95.5 Pseudomonas aeruginosa group Bacteria 1N720@1224,1SCI4@1236,1YGSU@136841,2E3XV@1,32YUV@2 NA|NA|NA S Phage tail assembly chaperone proteins, E, or 41 or 14 HGDHCNMN_02278 1437882.AZRU01000009_gene890 7.4e-93 347.4 Pseudomonas aeruginosa group gpN Bacteria 1MUWR@1224,1RPKI@1236,1YD4G@136841,2CCQ9@1,2Z7HY@2 NA|NA|NA S Phage major capsid protein, P2 family HGDHCNMN_02280 1123487.KB892865_gene1360 4.3e-110 405.6 Betaproteobacteria Bacteria 1MY24@1224,28HIF@1,2VM3H@28216,2Z7TX@2 NA|NA|NA S replication HGDHCNMN_02283 748247.AZKH_1033 7.4e-52 209.9 Rhodocyclales mnmA GO:0001510,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004808,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016782,GO:0016783,GO:0030488,GO:0032259,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.8.1.13 ko:K00566 ko04122,map04122 R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 Bacteria 1MUT1@1224,2KVQU@206389,2VJRR@28216,COG0482@1,COG0482@2 NA|NA|NA J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 HGDHCNMN_02284 305700.B447_07347 4.1e-78 297.7 Rhodocyclales ko:K08307 ko00000,ko01000,ko01011 Bacteria 1R666@1224,2KW2B@206389,2VHI4@28216,COG0741@1,COG0741@2 NA|NA|NA M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) HGDHCNMN_02285 1123487.KB892839_gene223 2e-252 878.2 Rhodocyclales proS GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iJN678.proS,iUTI89_1310.UTI89_C0210 Bacteria 1MU7E@1224,2KUQX@206389,2VGZ9@28216,COG0442@1,COG0442@2 NA|NA|NA J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS HGDHCNMN_02286 497321.C664_10108 1.6e-89 335.5 Rhodocyclales nudH GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010468,GO:0010604,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019219,GO:0019222,GO:0019439,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0033554,GO:0034353,GO:0034641,GO:0034655,GO:0043167,GO:0043169,GO:0043170,GO:0043487,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0045935,GO:0046483,GO:0046700,GO:0046872,GO:0048518,GO:0048519,GO:0048522,GO:0050779,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:1901360,GO:1901361,GO:1901575 ko:K08311 ko03018,map03018 R10816 RC00002 ko00000,ko00001,ko01000,ko03019 Bacteria 1RDGJ@1224,2KU7I@206389,2VIDX@28216,COG0494@1,COG0494@2 NA|NA|NA L Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage HGDHCNMN_02287 76114.ebA948 5.5e-48 197.6 Rhodocyclales Bacteria 1RJTX@1224,2KWPB@206389,2VTQI@28216,COG0517@1,COG0517@2 NA|NA|NA S Domain in cystathionine beta-synthase and other proteins. HGDHCNMN_02288 204773.HEAR2783 2.9e-32 145.2 Oxalobacteraceae Bacteria 1MYSE@1224,2B1HQ@1,2VUU0@28216,31TYQ@2,478TP@75682 NA|NA|NA S CNP1-like family HGDHCNMN_02289 497321.C664_10098 5.1e-81 307.4 Rhodocyclales coq7 ko:K06134 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00128 R04984,R08775 RC01254 ko00000,ko00001,ko00002,ko01000 Bacteria 1RAA1@1224,2KUDE@206389,2VQRE@28216,COG2941@1,COG2941@2 NA|NA|NA H Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol HGDHCNMN_02290 748247.AZKH_1055 6e-57 226.9 Rhodocyclales yhfA ko:K07397 ko00000 Bacteria 1RCZW@1224,2KWBK@206389,2VR62@28216,COG1765@1,COG1765@2 NA|NA|NA O redox protein, regulator of disulfide bond formation HGDHCNMN_02291 1123487.KB892865_gene1550 9.6e-71 272.7 Rhodocyclales rplM GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02871 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RA11@1224,2KW9N@206389,2VQ07@28216,COG0102@1,COG0102@2 NA|NA|NA J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly HGDHCNMN_02292 748247.AZKH_1057 5.6e-57 226.9 Rhodocyclales rpsI GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02996 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RD4A@1224,2KWFU@206389,2VR5R@28216,COG0103@1,COG0103@2 NA|NA|NA J Belongs to the universal ribosomal protein uS9 family HGDHCNMN_02293 1123367.C666_10430 7.3e-157 560.1 Rhodocyclales argC GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R03443 RC00684 ko00000,ko00001,ko00002,ko01000 iLJ478.TM1782,iSSON_1240.SSON_4131,iYO844.BSU11190 Bacteria 1MVJ6@1224,2KVIA@206389,2VJD7@28216,COG0002@1,COG0002@2 NA|NA|NA E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde HGDHCNMN_02294 1000565.METUNv1_02878 8.2e-52 209.5 Rhodocyclales erpA GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0031163,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:0071944,GO:1901564 ko:K13628,ko:K15724 ko00000,ko03016 Bacteria 1RHCW@1224,2KWB8@206389,2VR2M@28216,COG0316@1,COG0316@2 NA|NA|NA C Required for insertion of 4Fe-4S clusters HGDHCNMN_02295 62928.azo2757 1.8e-99 369.8 Rhodocyclales yebA Bacteria 1MVTF@1224,2KUX7@206389,2VHBS@28216,COG0739@1,COG0739@2 NA|NA|NA M COG0739 Membrane proteins related to metalloendopeptidases HGDHCNMN_02296 62928.azo2756 3.7e-184 651.0 Rhodocyclales tyrS GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 ko:K01866 ko00970,map00970 M00359,M00360 R02918 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 iJN746.PP_0436,iLJ478.TM0478 Bacteria 1MVUQ@1224,2KUT9@206389,2VHF7@28216,COG0162@1,COG0162@2 NA|NA|NA J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) HGDHCNMN_02297 99598.Cal7507_1395 8.9e-20 102.8 Cyanobacteria MA20_18330 Bacteria 1G82P@1117,COG1359@1,COG1359@2 NA|NA|NA S PFAM Antibiotic biosynthesis monooxygenase HGDHCNMN_02298 159087.Daro_1914 3.9e-76 291.6 Rhodocyclales ko:K07124 ko00000 Bacteria 1QVBZ@1224,2KYRN@206389,2VNI1@28216,COG2267@1,COG2267@2 NA|NA|NA I Alpha/beta hydrolase family HGDHCNMN_02299 62928.azo3688 2.6e-45 188.0 Rhodocyclales ko:K06995 ko00000 Bacteria 1N0F7@1224,2KWXZ@206389,2VU3R@28216,COG3450@1,COG3450@2 NA|NA|NA S Protein of unknown function (DUF861) HGDHCNMN_02300 159087.Daro_0041 5.5e-58 230.7 Rhodocyclales Bacteria 1N1C2@1224,2CMG5@1,2KZCB@206389,2VVAC@28216,32SEP@2 NA|NA|NA HGDHCNMN_02301 987059.RBXJA2T_16722 7.7e-106 390.2 unclassified Burkholderiales murB 1.3.1.98 ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 R03191,R03192 RC02639 ko00000,ko00001,ko01000,ko01011 Bacteria 1KJJE@119065,1MXDH@1224,2VI7I@28216,COG0812@1,COG0812@2 NA|NA|NA M Cell wall formation HGDHCNMN_02302 1304883.KI912532_gene495 8.7e-81 306.2 Rhodocyclales 4.4.1.5 ko:K01759,ko:K08234 ko00620,map00620 R02530 RC00004,RC00740 ko00000,ko00001,ko01000 Bacteria 1RA9H@1224,2KVY3@206389,2VQ0D@28216,COG0346@1,COG0346@2 NA|NA|NA E Lactoylglutathione lyase HGDHCNMN_02303 1049564.TevJSym_aa00960 1.6e-56 227.6 unclassified Gammaproteobacteria Bacteria 1J4Y6@118884,1NRP8@1224,1SKTW@1236,COG0642@1,COG0642@2,COG0834@1,COG0834@2,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_02304 1000565.METUNv1_03515 1e-108 399.8 Rhodocyclales ypfJ GO:0005575,GO:0005576 ko:K07054 ko00000 Bacteria 1MU4U@1224,2KUZK@206389,2VH8U@28216,COG2321@1,COG2321@2 NA|NA|NA S Putative neutral zinc metallopeptidase HGDHCNMN_02305 1000565.METUNv1_01021 2.1e-139 502.7 Rhodocyclales srmB GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003727,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008104,GO:0008143,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0033036,GO:0033592,GO:0034622,GO:0034641,GO:0035770,GO:0036464,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043170,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0046483,GO:0051179,GO:0060293,GO:0065003,GO:0070035,GO:0070717,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097617,GO:0140098,GO:1901360,GO:1901363,GO:1990904 3.6.4.13 ko:K05590,ko:K11927 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 1MU49@1224,2KVW0@206389,2VH16@28216,COG0513@1,COG0513@2 NA|NA|NA L Belongs to the DEAD box helicase family HGDHCNMN_02306 305700.B447_16834 1.3e-35 156.0 Rhodocyclales fliW ko:K13626 ko00000,ko02035 Bacteria 1N9E7@1224,2KWTA@206389,2VUC5@28216,COG1699@1,COG1699@2 NA|NA|NA S Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum HGDHCNMN_02307 1265502.KB905944_gene721 8e-103 380.6 Comamonadaceae gatB GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.12,6.3.5.6,6.3.5.7 ko:K01876,ko:K02434 ko00970,ko01100,map00970,map01100 M00359,M00360 R03905,R04212,R05577 RC00010,RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 1MUKG@1224,2VI3A@28216,4AAJ8@80864,COG0064@1,COG0064@2 NA|NA|NA J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) HGDHCNMN_02308 159087.Daro_2806 7e-51 207.6 Rhodocyclales XK27_08510 ko:K06919 ko00000 Bacteria 1RE15@1224,2KX1C@206389,2VSA8@28216,COG4951@1,COG4951@2 NA|NA|NA L DNA primase small subunit HGDHCNMN_02309 1301098.PKB_2967 7.3e-106 390.6 Gammaproteobacteria Bacteria 1Q1V6@1224,1RT3H@1236,COG4757@1,COG4757@2 NA|NA|NA S Alpha beta hydrolase HGDHCNMN_02310 402626.Rpic_1327 8.4e-104 383.6 Burkholderiaceae Bacteria 1K2B4@119060,1N3DV@1224,2WEAQ@28216,COG0583@1,COG0583@2 NA|NA|NA K PFAM regulatory protein LysR HGDHCNMN_02311 1532557.JL37_21615 1.3e-144 519.6 Alcaligenaceae Bacteria 1MVHG@1224,2VHCU@28216,3T25Q@506,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HGDHCNMN_02314 402626.Rpic_3584 2.3e-25 122.1 Burkholderiaceae Bacteria 1KDWD@119060,1NPUA@1224,29PWE@1,2VYHX@28216,30AUS@2 NA|NA|NA HGDHCNMN_02315 261292.Nit79A3_3106 1e-39 170.6 Betaproteobacteria Bacteria 1NAFT@1224,2DNRZ@1,2WFSC@28216,32YVF@2 NA|NA|NA S Protein of unknown function (DUF2971) HGDHCNMN_02316 1120999.JONM01000007_gene1753 1.6e-67 263.1 Neisseriales Bacteria 1MZZP@1224,2KSVD@206351,2VP43@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HGDHCNMN_02317 1288494.EBAPG3_23970 1.5e-126 459.9 Nitrosomonadales putA GO:0000166,GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003824,GO:0003842,GO:0004657,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006355,GO:0006520,GO:0006536,GO:0006560,GO:0006562,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009889,GO:0009890,GO:0009892,GO:0009898,GO:0009987,GO:0010133,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0016054,GO:0016491,GO:0016645,GO:0016646,GO:0019219,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043565,GO:0043648,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044425,GO:0044459,GO:0044464,GO:0045892,GO:0045934,GO:0046395,GO:0046483,GO:0046700,GO:0048037,GO:0048519,GO:0048523,GO:0050660,GO:0050662,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0055114,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:0098552,GO:0098562,GO:0140110,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 1.2.1.88,1.3.8.7,1.5.5.2 ko:K00249,ko:K00294,ko:K13821 ko00071,ko00250,ko00280,ko00330,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00250,map00280,map00330,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320 M00013,M00036,M00087 R00245,R00707,R00708,R00924,R01175,R01253,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04444,R04445,R04751,R04754,R05051 RC00052,RC00068,RC00076,RC00080,RC00083,RC00095,RC00148,RC00216,RC00242,RC00246,RC00255 ko00000,ko00001,ko00002,ko01000,ko03000 iPC815.YPO1851,iSbBS512_1146.SbBS512_E2304 Bacteria 1MV93@1224,2VITK@28216,371MC@32003,COG0506@1,COG0506@2,COG4230@1,COG4230@2 NA|NA|NA C Oxidizes proline to glutamate for use as a carbon and nitrogen source HGDHCNMN_02318 497321.C664_13619 2.1e-27 128.3 Rhodocyclales Bacteria 1QTTR@1224,2KWSX@206389,2WGT1@28216,COG2905@1,COG2905@2 NA|NA|NA T Signal transduction protein HGDHCNMN_02319 640081.Dsui_1462 2.2e-96 358.6 Rhodocyclales ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MU45@1224,2KZR3@206389,2VIKP@28216,COG1136@1,COG1136@2 NA|NA|NA V ATPases associated with a variety of cellular activities HGDHCNMN_02320 216591.BCAL0192 2.1e-94 352.8 Burkholderiaceae acrA ko:K02005 ko00000 Bacteria 1K520@119060,1MUMV@1224,2VIYG@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family HGDHCNMN_02321 1123392.AQWL01000002_gene1883 1.9e-112 412.9 Hydrogenophilales qseC 2.7.13.3 ko:K02484,ko:K07645,ko:K07653,ko:K18351 ko01502,ko02020,ko02024,map01502,map02020,map02024 M00453,M00460,M00651,M00658 ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 Bacteria 1KS6K@119069,1QTSX@1224,2W1JF@28216,COG0642@1,COG0642@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_02322 292415.Tbd_0136 1.5e-73 282.7 Hydrogenophilales Bacteria 1KRJY@119069,1N0YI@1224,2VHIS@28216,COG0745@1,COG0745@2 NA|NA|NA T Transcriptional regulatory protein, C terminal HGDHCNMN_02323 1280950.HJO_00335 3.3e-10 71.2 Hyphomonadaceae Bacteria 1NHDB@1224,2V997@28211,440CH@69657,COG3212@1,COG3212@2 NA|NA|NA S peptidase HGDHCNMN_02324 1161401.ASJA01000015_gene945 1.2e-75 290.0 Hyphomonadaceae dnaJ1 ko:K03686,ko:K05516 ko00000,ko03029,ko03036,ko03110 Bacteria 1MUZ4@1224,2TR01@28211,43X3K@69657,COG0484@1,COG0484@2 NA|NA|NA O COG2214 DnaJ-class molecular chaperone HGDHCNMN_02325 631454.N177_3941 6.9e-51 207.6 Rhodobiaceae Bacteria 1JNQP@119043,1MXN7@1224,2TR83@28211,COG3391@1,COG3391@2 NA|NA|NA S GTA TIM-barrel-like domain HGDHCNMN_02326 159087.Daro_1394 6.1e-66 256.9 Rhodocyclales nifZ 5.2.1.8 ko:K02597,ko:K03769,ko:K03771 ko00000,ko01000,ko03110 Bacteria 1QUCX@1224,2KWSM@206389,2WGPH@28216,COG0760@1,COG0760@2 NA|NA|NA O NifZ domain HGDHCNMN_02327 159087.Daro_1395 1.7e-49 201.8 Rhodocyclales nifW ko:K02595 ko00000 Bacteria 1NA3E@1224,2E67S@1,2KX7Q@206389,2VX71@28216,330W8@2 NA|NA|NA S May protect the nitrogenase Fe-Mo protein from oxidative damage HGDHCNMN_02328 159087.Daro_1396 9.4e-55 219.9 Rhodocyclales Bacteria 1R714@1224,2KXAR@206389,2VRZB@28216,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeat HGDHCNMN_02329 159087.Daro_1397 7.8e-119 433.3 Rhodocyclales cysE GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVFX@1224,2KVBQ@206389,2VMGF@28216,COG1045@1,COG1045@2 NA|NA|NA E Bacterial transferase hexapeptide (six repeats) HGDHCNMN_02330 159087.Daro_1398 3.9e-167 594.3 Rhodocyclales nifV 2.3.3.14 ko:K02594 ko00620,map00620 R00271 RC00004,RC00067,RC02754 ko00000,ko00001,ko01000 Bacteria 1MUNQ@1224,2KVEU@206389,2VIRD@28216,COG0119@1,COG0119@2 NA|NA|NA E HMGL-like HGDHCNMN_02331 220664.PFL_4240 1.3e-168 600.5 Pseudomonas fluorescens group Bacteria 1MV37@1224,1RM9C@1236,1YPT5@136843,COG2206@1,COG2206@2 NA|NA|NA T HD domain HGDHCNMN_02332 1123367.C666_09645 6.2e-38 163.7 Rhodocyclales Bacteria 1N1TU@1224,2KYT2@206389,2W2PA@28216,COG2905@1,COG2905@2 NA|NA|NA T 'signal transduction protein HGDHCNMN_02333 159087.Daro_3546 9.4e-27 126.3 Rhodocyclales ko:K01420,ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 Bacteria 1N6WV@1224,2KZBU@206389,2VWSV@28216,COG0664@1,COG0664@2 NA|NA|NA T Cyclic nucleotide-monophosphate binding domain HGDHCNMN_02335 864051.BurJ1DRAFT_3660 3.9e-59 235.0 unclassified Burkholderiales Bacteria 1KPIP@119065,1QZU6@1224,2VJDD@28216,COG0861@1,COG0861@2 NA|NA|NA P membrane protein, terc HGDHCNMN_02336 748247.AZKH_0467 3.4e-23 114.8 Rhodocyclales Bacteria 1N8EJ@1224,2KX5X@206389,2VUAF@28216,COG0589@1,COG0589@2 NA|NA|NA T Universal stress protein family HGDHCNMN_02337 338966.Ppro_2360 2.3e-59 235.0 Desulfuromonadales aroQ GO:0003674,GO:0003824,GO:0003855,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0071704,GO:1901576 3.4.13.9,4.2.1.10 ko:K01271,ko:K03785,ko:K03786,ko:K16021 ko00400,ko01051,ko01100,ko01110,ko01130,ko01230,map00400,map01051,map01100,map01110,map01130,map01230 M00022 R03084,R06593 RC00848 ko00000,ko00001,ko00002,ko01000,ko01002 iIT341.HP1038,iJN746.PP_0560,iLJ478.TM0349 Bacteria 1RDDT@1224,2WP6E@28221,42QU1@68525,43SNK@69541,COG0757@1,COG0757@2 NA|NA|NA E Catalyzes a trans-dehydration via an enolate intermediate HGDHCNMN_02338 748247.AZKH_4434 7.9e-70 270.8 Rhodocyclales Bacteria 1N3DV@1224,2KWIT@206389,2WEAQ@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HGDHCNMN_02339 1454004.AW11_00947 1.7e-133 482.6 Betaproteobacteria Bacteria 1MW6T@1224,2VIXB@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HGDHCNMN_02340 76114.ebA2890 1.7e-163 582.8 Rhodocyclales ycbB ko:K21470 ko00000,ko01002,ko01011 Bacteria 1MV14@1224,2KWIP@206389,2VHVQ@28216,COG2989@1,COG2989@2 NA|NA|NA S ErfK YbiS YcfS YnhG family protein HGDHCNMN_02341 583345.Mmol_1115 4.3e-74 284.3 Betaproteobacteria Bacteria 1R9XD@1224,2VQTQ@28216,COG2353@1,COG2353@2 NA|NA|NA S Belongs to the UPF0312 family HGDHCNMN_02342 1454004.AW11_03282 7.3e-58 230.3 Betaproteobacteria Bacteria 1RJFZ@1224,2VQHC@28216,COG2353@1,COG2353@2 NA|NA|NA S Belongs to the UPF0312 family HGDHCNMN_02343 1485544.JQKP01000001_gene871 1.1e-60 239.6 Nitrosomonadales cybB ko:K12262 ko00000 Bacteria 1MZ7X@1224,2VS28@28216,44VU1@713636,COG3038@1,COG3038@2 NA|NA|NA C PFAM cytochrome HGDHCNMN_02344 1121035.AUCH01000008_gene1060 2.7e-90 338.6 Rhodocyclales ygiD 1.13.11.8 ko:K04100,ko:K15777 ko00362,ko00624,ko00627,ko00965,ko01120,map00362,map00624,map00627,map00965,map01120 R01632,R03550,R04280,R08836,R09565 RC00233,RC00387,RC00535,RC02567,RC02694 br01602,ko00000,ko00001,ko01000 Bacteria 1MXJZ@1224,2KVN7@206389,2VIC3@28216,COG3384@1,COG3384@2 NA|NA|NA S Catalytic LigB subunit of aromatic ring-opening dioxygenase HGDHCNMN_02345 76114.ebA5018 1.4e-103 382.9 Rhodocyclales dmlR_8 GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 Bacteria 1MW16@1224,2KVET@206389,2VK4X@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HGDHCNMN_02346 1454004.AW11_03623 0.0 1454.9 Betaproteobacteria Bacteria 1R58S@1224,2VJWF@28216,COG2010@1,COG2010@2 NA|NA|NA C Cytochrome c HGDHCNMN_02347 159087.Daro_2937 8.7e-119 433.3 Rhodocyclales Bacteria 1P7W7@1224,29FX8@1,2KYBY@206389,2VM6V@28216,302UX@2 NA|NA|NA HGDHCNMN_02348 159087.Daro_2938 4.7e-168 598.2 Rhodocyclales Bacteria 1R894@1224,28MTI@1,2KVD1@206389,2VMZB@28216,2ZB1Q@2 NA|NA|NA HGDHCNMN_02349 1454004.AW11_03627 1e-239 835.9 Betaproteobacteria Bacteria 1QVCJ@1224,2VIF0@28216,COG1858@1,COG1858@2 NA|NA|NA C cytochrome C peroxidase HGDHCNMN_02350 1454004.AW11_03628 6.7e-220 770.0 Betaproteobacteria Bacteria 1QVCJ@1224,2VIIC@28216,COG1858@1,COG1858@2 NA|NA|NA P cytochrome C peroxidase HGDHCNMN_02351 279714.FuraDRAFT_0506 1.2e-26 125.9 Betaproteobacteria dgkA 2.7.1.107,2.7.1.66 ko:K00887,ko:K00901 ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231 R02240,R05626 RC00002,RC00017 ko00000,ko00001,ko01000 iSB619.SA_RS07900 Bacteria 1PWN6@1224,2VVU3@28216,COG0818@1,COG0818@2 NA|NA|NA M Diacylglycerol kinase HGDHCNMN_02352 1095769.CAHF01000010_gene1314 1.3e-77 296.6 Betaproteobacteria 3.5.1.104 ko:K22278 ko00000,ko01000 Bacteria 1PYK1@1224,2W2JS@28216,COG0726@1,COG0726@2 NA|NA|NA G Polysaccharide deacetylase HGDHCNMN_02353 1159870.KB907784_gene552 1.7e-134 486.1 Alcaligenaceae sod22 Bacteria 1QA7B@1224,2VHPR@28216,3T7DV@506,COG0025@1,COG0025@2 NA|NA|NA P COG0025 NhaP-type Na H and K H antiporters HGDHCNMN_02354 757424.Hsero_3372 0.0 1124.8 Oxalobacteraceae mgtA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0099131,GO:0099132 3.6.3.2 ko:K01531,ko:K16905 ko02010,map02010 M00224 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.3.4 iSF_1195.SF4248 Bacteria 1MUU5@1224,2VH2F@28216,4736T@75682,COG0474@1,COG0474@2 NA|NA|NA P Cation transporter/ATPase, N-terminus HGDHCNMN_02355 1121035.AUCH01000005_gene138 3.5e-87 328.2 Rhodocyclales scpB GO:0003674,GO:0003824,GO:0004300,GO:0004492,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016829,GO:0016830,GO:0016831,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 4.1.1.41 ko:K11264 ko00640,map00640 R00923 RC00097 ko00000,ko00001,ko01000 iSSON_1240.SSON_3070 Bacteria 1R3SQ@1224,2KWFF@206389,2VJRJ@28216,COG1024@1,COG1024@2 NA|NA|NA I Enoyl-CoA hydratase/isomerase HGDHCNMN_02356 76114.ebA220 5.2e-142 511.1 Rhodocyclales intF GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0050896 Bacteria 1N2H9@1224,2KUY2@206389,2VICV@28216,COG0582@1,COG0582@2 NA|NA|NA L Arm DNA-binding domain HGDHCNMN_02357 1454004.AW11_00915 5.9e-37 159.8 Betaproteobacteria ko:K07334 ko00000,ko02048 Bacteria 1MZ4I@1224,2VW45@28216,COG3549@1,COG3549@2 NA|NA|NA S RelE-like toxin of type II toxin-antitoxin system HigB HGDHCNMN_02358 1454004.AW11_00914 1.5e-40 171.8 Betaproteobacteria ko:K21498 ko00000,ko02048 Bacteria 1N2BD@1224,2VVV1@28216,COG3093@1,COG3093@2 NA|NA|NA K Helix-turn-helix HGDHCNMN_02359 1123392.AQWL01000028_gene16 5.1e-40 170.2 Betaproteobacteria Bacteria 1MZC9@1224,2VSDW@28216,COG4679@1,COG4679@2 NA|NA|NA S Phage derived protein Gp49-like (DUF891) HGDHCNMN_02360 1123255.JHYS01000009_gene2285 2.7e-24 117.9 Comamonadaceae Bacteria 1NA3S@1224,2VT34@28216,4AFPZ@80864,COG5606@1,COG5606@2 NA|NA|NA K Helix-turn-helix domain HGDHCNMN_02361 85643.Tmz1t_3905 1.3e-50 205.7 Betaproteobacteria ko:K18831 ko00000,ko02048,ko03000 Bacteria 1MZHS@1224,2VRK1@28216,COG5499@1,COG5499@2 NA|NA|NA K regulator HGDHCNMN_02365 76114.ebD31 7.4e-13 79.7 Rhodocyclales Bacteria 1NIET@1224,2EQHZ@1,2KXI2@206389,2VXWP@28216,33I3Z@2 NA|NA|NA HGDHCNMN_02366 497321.C664_02235 2.2e-21 108.6 Betaproteobacteria Bacteria 1Q0R8@1224,2DR34@1,2W5M8@28216,339YW@2 NA|NA|NA S Helix-turn-helix domain HGDHCNMN_02368 1286093.C266_14014 2.5e-38 166.0 Betaproteobacteria Bacteria 1PR7M@1224,2W330@28216,COG3756@1,COG3756@2 NA|NA|NA S Protein conserved in bacteria HGDHCNMN_02370 1286631.X805_40930 1.4e-50 206.8 unclassified Burkholderiales Bacteria 1KMS0@119065,1RDQ4@1224,2VU8D@28216,COG1835@1,COG1835@2 NA|NA|NA I Acyltransferase family HGDHCNMN_02371 497321.C664_09575 1.2e-11 77.0 Proteobacteria 3.2.1.14,3.2.1.4 ko:K01179,ko:K01183 ko00500,ko00520,ko01100,map00500,map00520,map01100 R01206,R02334,R06200,R11307,R11308 RC00467 ko00000,ko00001,ko01000 GH18,GH5,GH9 Bacteria 1NDJ1@1224,COG2755@1,COG2755@2 NA|NA|NA E GDSL-like Lipase/Acylhydrolase family HGDHCNMN_02372 1323663.AROI01000009_gene3758 3.7e-167 594.7 Gammaproteobacteria aldh1 1.2.1.3,1.2.1.83 ko:K00128,ko:K19700 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00760,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00760,map00903,map00981,map01100,map01110,map01120,map01130 M00135,M00811 R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146,R10105 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU1V@1224,1RMBQ@1236,COG1012@1,COG1012@2 NA|NA|NA C belongs to the aldehyde dehydrogenase family HGDHCNMN_02373 62928.azo3627 5.8e-94 350.9 Rhodocyclales slt_1 ko:K08309 ko00000,ko01000,ko01011 GH23 Bacteria 1MZ4X@1224,2KV7Z@206389,2VM6E@28216,COG0741@1,COG0741@2 NA|NA|NA M Lytic transglycosylase HGDHCNMN_02374 305700.B447_14419 1e-35 156.4 Rhodocyclales MA20_18215 1.8.4.10,1.8.4.8 ko:K00390 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00176 R02021 RC00007,RC02862 ko00000,ko00001,ko00002,ko01000 Bacteria 1RJR9@1224,2KZ7U@206389,2VSQB@28216,COG3749@1,COG3749@2 NA|NA|NA S Bacterial protein of unknown function (DUF934) HGDHCNMN_02375 89187.ISM_15460 3.2e-11 73.9 Roseovarius iscA GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009058,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0018130,GO:0019438,GO:0019538,GO:0022607,GO:0031163,GO:0031974,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0070013,GO:0071704,GO:0071840,GO:0097428,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 ko:K13628,ko:K15724,ko:K22063 ko00000,ko03016,ko03029 Bacteria 1RH6T@1224,2UBWJ@28211,46QW4@74030,COG0316@1,COG0316@2 NA|NA|NA S Belongs to the HesB IscA family HGDHCNMN_02376 575540.Isop_3573 1.7e-19 102.4 Bacteria Bacteria 2DUKG@1,33R4D@2 NA|NA|NA HGDHCNMN_02377 156889.Mmc1_2177 1.6e-131 476.5 Alphaproteobacteria ko:K01993,ko:K16922 ko00000,ko01002 Bacteria 1N97Q@1224,2U22Z@28211,COG0845@1,COG0845@2 NA|NA|NA M GAF domain protein HGDHCNMN_02378 156889.Mmc1_2176 1.5e-212 746.1 Alphaproteobacteria yydH ko:K16922 ko00000,ko01002 Bacteria 1MW9I@1224,2U0H8@28211,COG1994@1,COG1994@2 NA|NA|NA M Peptidase, M50 family HGDHCNMN_02379 156889.Mmc1_2175 4.2e-177 628.2 Alphaproteobacteria secA2 ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 Bacteria 1MX0P@1224,2U086@28211,COG0653@1,COG0653@2 NA|NA|NA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane HGDHCNMN_02380 156889.Mmc1_2174 4.5e-47 194.9 Alphaproteobacteria cusB ko:K13888 M00709 ko00000,ko00002,ko02000 8.A.1 Bacteria 1RC4B@1224,2U65Q@28211,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family HGDHCNMN_02381 156889.Mmc1_2173 2.3e-133 483.0 Alphaproteobacteria Bacteria 1MWEC@1224,2U04Z@28211,COG2831@1,COG2831@2 NA|NA|NA U Polypeptide-transport-associated domain protein ShlB-type HGDHCNMN_02387 1175306.GWL_35150 1.9e-84 318.9 Oxalobacteraceae yadH ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MUH1@1224,2VH42@28216,472AY@75682,COG0842@1,COG0842@2 NA|NA|NA U Transport permease protein HGDHCNMN_02388 748247.AZKH_0752 2.9e-30 137.5 Rhodocyclales yrbA GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051536,GO:0051537,GO:0051540 Bacteria 1MZCZ@1224,2KXGQ@206389,2VU0K@28216,COG5007@1,COG5007@2 NA|NA|NA K BolA-like protein HGDHCNMN_02389 497321.C664_04692 6.3e-203 713.4 Rhodocyclales murA GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008760,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016765,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.5.1.7 ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 R00660 RC00350 ko00000,ko00001,ko01000,ko01011 Bacteria 1MUH7@1224,2KUKJ@206389,2VHZN@28216,COG0766@1,COG0766@2 NA|NA|NA M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine HGDHCNMN_02390 864051.BurJ1DRAFT_4038 1.8e-67 263.5 Proteobacteria Bacteria 1RFP5@1224,COG0464@1,COG0464@2 NA|NA|NA O ATPase family associated with various cellular activities (AAA) HGDHCNMN_02391 305700.B447_12794 5.1e-103 380.6 Rhodocyclales hisG GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01071 RC02819,RC03200 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUCY@1224,2KUBS@206389,2VIF9@28216,COG0040@1,COG0040@2 NA|NA|NA F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity HGDHCNMN_02392 748247.AZKH_0755 9.2e-189 666.4 Rhodocyclales hisD GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,1.1.1.308 ko:K00013,ko:K15509 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01158,R01163,R03012 RC00099,RC00242,RC00463 ko00000,ko00001,ko00002,ko01000 iYO844.BSU34910 Bacteria 1MUUF@1224,2KURU@206389,2VJ7K@28216,COG0141@1,COG0141@2 NA|NA|NA E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine HGDHCNMN_02393 1000565.METUNv1_02432 3.1e-150 538.1 Rhodocyclales hisC 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 iJN678.hisC Bacteria 1MW7I@1224,2KV26@206389,2VHFU@28216,COG0079@1,COG0079@2 NA|NA|NA E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily HGDHCNMN_02394 1286631.X805_28440 1.7e-89 335.5 unclassified Burkholderiales hisB GO:0000105,GO:0003674,GO:0003824,GO:0004401,GO:0004424,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042578,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,2.6.1.9,3.1.3.15,4.2.1.19 ko:K00013,ko:K00817,ko:K01089,ko:K01693 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R01158,R01163,R03012,R03013,R03243,R03457 RC00006,RC00017,RC00099,RC00242,RC00463,RC00888,RC00932 ko00000,ko00001,ko00002,ko01000,ko01007 iECO111_1330.ECO111_2746,iECS88_1305.ECS88_2121,iJN746.PP_0289,iLJ478.TM1039,iSB619.SA_RS14130,iUMNK88_1353.UMNK88_2570 Bacteria 1KJTJ@119065,1MWBS@1224,2VI59@28216,COG0131@1,COG0131@2 NA|NA|NA E Imidazoleglycerol-phosphate dehydratase HGDHCNMN_02395 305700.B447_12814 4e-89 334.3 Rhodocyclales hisH GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU4X@1224,2KUCS@206389,2VJPI@28216,COG0118@1,COG0118@2 NA|NA|NA E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR HGDHCNMN_02396 748247.AZKH_0759 8.8e-120 436.4 Rhodocyclales hisA GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04640 RC00945 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_0388 Bacteria 1MW6S@1224,2KUM6@206389,2VI38@28216,COG0106@1,COG0106@2 NA|NA|NA E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase HGDHCNMN_02397 76114.ebA1291 1.1e-122 446.0 Rhodocyclales hisF GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUS0@1224,2KV5N@206389,2VHY0@28216,COG0107@1,COG0107@2 NA|NA|NA E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit HGDHCNMN_02398 1123367.C666_07270 1.7e-58 231.9 Rhodocyclales hisI GO:0000105,GO:0003674,GO:0003824,GO:0004635,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31 ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037 RC00002,RC01055 ko00000,ko00001,ko00002,ko01000 iJN746.PP_5014 Bacteria 1MW67@1224,2KWD3@206389,2VR9B@28216,COG0139@1,COG0139@2 NA|NA|NA E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP HGDHCNMN_02399 748247.AZKH_0762 2.4e-45 188.0 Rhodocyclales hisE GO:0000105,GO:0000287,GO:0003674,GO:0003824,GO:0004636,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052803,GO:0071704,GO:0071944,GO:0075136,GO:0075139,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31,5.3.1.16 ko:K01523,ko:K01814,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037,R04640 RC00002,RC00945,RC01055 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS14110,iYO844.BSU34860 Bacteria 1MZEE@1224,2KWKQ@206389,2VUN8@28216,COG0140@1,COG0140@2 NA|NA|NA F phosphoribosyl-ATP pyrophosphohydrolase HGDHCNMN_02400 640081.Dsui_1421 9.6e-45 186.0 Rhodocyclales hinT GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019478,GO:0019752,GO:0043436,GO:0043530,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055130,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.1.226,2.1.1.227 ko:K02503,ko:K06442 ko00000,ko01000,ko03009,ko04147 Bacteria 1RDCJ@1224,2KWJU@206389,2VSMS@28216,COG0537@1,COG0537@2 NA|NA|NA FG COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases HGDHCNMN_02401 748247.AZKH_0764 3e-20 104.0 Rhodocyclales tatA GO:0003674,GO:0005215 ko:K03116,ko:K03425 ko03060,ko03070,map03060,map03070 M00336 ko00000,ko00001,ko00002,ko02044 2.A.64 Bacteria 1N6S4@1224,2KX8N@206389,2VVT6@28216,COG1826@1,COG1826@2 NA|NA|NA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system HGDHCNMN_02402 1121035.AUCH01000003_gene1149 5.3e-26 124.4 Rhodocyclales tatB GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 ko:K03116,ko:K03117 ko03060,ko03070,map03060,map03070 M00336 ko00000,ko00001,ko00002,ko02044 2.A.64 Bacteria 1N73F@1224,2KWT9@206389,2VVPX@28216,COG1826@1,COG1826@2 NA|NA|NA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation HGDHCNMN_02403 305700.B447_12854 9.3e-106 389.8 Rhodocyclales tatC GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 ko:K03118 ko03060,ko03070,map03060,map03070 M00336 ko00000,ko00001,ko00002,ko02044 2.A.64 Bacteria 1MVAY@1224,2KUWA@206389,2VI2H@28216,COG0805@1,COG0805@2 NA|NA|NA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides HGDHCNMN_02404 62928.azo0775 1.4e-72 279.3 Rhodocyclales Bacteria 1RA0V@1224,2KX41@206389,2VQAK@28216,COG1961@1,COG1961@2 NA|NA|NA L Resolvase, N terminal domain HGDHCNMN_02405 1123401.JHYQ01000014_gene853 8.4e-36 156.4 Gammaproteobacteria Bacteria 1RKR6@1224,1T11N@1236,COG4190@1,COG4190@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_02406 743299.Acife_2116 1.3e-31 142.1 Acidithiobacillales Bacteria 1N9JJ@1224,1SCAK@1236,2E33J@1,2NDDP@225057,32Y3P@2 NA|NA|NA HGDHCNMN_02407 76114.p2A160 1.8e-57 229.2 Rhodocyclales Bacteria 1RFZU@1224,2M049@206389,2VQDU@28216,COG2135@1,COG2135@2 NA|NA|NA S SOS response associated peptidase (SRAP) HGDHCNMN_02408 1097668.BYI23_B000500 5e-44 184.5 Betaproteobacteria ligA GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 ko:K01972,ko:K12472 ko03030,ko03410,ko03420,ko03430,ko04144,map03030,map03410,map03420,map03430,map04144 R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400,ko04131 Bacteria 1RH16@1224,2W29Q@28216,COG0272@1,COG0272@2 NA|NA|NA L NAD-dependent DNA ligase HGDHCNMN_02409 589865.DaAHT2_2156 6.4e-136 491.1 Desulfobacterales traC Bacteria 1QTXN@1224,2MIXV@213118,2X7SC@28221,43CH5@68525,COG4643@1,COG4643@2 NA|NA|NA L Toprim domain HGDHCNMN_02413 511.JT27_00540 2.2e-37 162.9 Alcaligenaceae Bacteria 1N1VX@1224,2CTXP@1,2VUI5@28216,32SUA@2,3T6C5@506 NA|NA|NA HGDHCNMN_02414 1122603.ATVI01000002_gene2142 3.8e-150 539.3 Xanthomonadales traC ko:K06919 ko00000 Bacteria 1MW5H@1224,1RQ7H@1236,1X4W2@135614,COG4643@1,COG4643@2,COG5519@1,COG5519@2 NA|NA|NA L Domain of unknown function (DUF927) HGDHCNMN_02416 639283.Snov_4357 3.2e-40 174.1 Alphaproteobacteria Bacteria 1QVE0@1224,2TWCY@28211,COG3941@1,COG3941@2 NA|NA|NA D Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division HGDHCNMN_02418 395494.Galf_2037 1.2e-13 82.4 Betaproteobacteria ko:K07733 ko00000,ko03000 Bacteria 1NHVW@1224,2VYCF@28216,COG3311@1,COG3311@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_02420 1042876.PPS_0769 3.2e-170 604.7 Gammaproteobacteria intA Bacteria 1MU23@1224,1RMJ1@1236,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family HGDHCNMN_02421 1000565.METUNv1_03812 1e-185 656.0 Rhodocyclales ychF GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 ko:K06942 ko00000,ko03009 Bacteria 1MVM4@1224,2KUD2@206389,2VJ1W@28216,COG0012@1,COG0012@2 NA|NA|NA J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner HGDHCNMN_02422 62928.azo1289 3.7e-214 751.1 Rhodocyclales ppkB 3.1.3.16 ko:K01090,ko:K20074 ko00000,ko01000,ko01009 Bacteria 1MV1P@1224,2KV8U@206389,2VH5K@28216,COG0515@1,COG0515@2,COG0631@1,COG0631@2 NA|NA|NA KLT Serine/threonine phosphatases, family 2C, catalytic domain HGDHCNMN_02423 748247.AZKH_0837 8.5e-197 693.0 Rhodocyclales nasA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02575 ko00910,map00910 M00615 ko00000,ko00001,ko00002,ko02000 2.A.1.8 iYO844.BSU03330 Bacteria 1MU27@1224,2KUW4@206389,2VI6Q@28216,COG2223@1,COG2223@2 NA|NA|NA P MFS/sugar transport protein HGDHCNMN_02424 1123487.KB892863_gene1963 6.8e-34 149.8 Rhodocyclales nirD 1.7.1.15 ko:K00363,ko:K05710 ko00360,ko00910,ko01120,ko01220,map00360,map00910,map01120,map01220 M00530,M00545 R00787,R06782,R06783 RC00098,RC00176 br01602,ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS12545,iYO844.BSU03290 Bacteria 1N03R@1224,2KX2K@206389,2VSP4@28216,COG2146@1,COG2146@2 NA|NA|NA P Rieske-like [2Fe-2S] domain HGDHCNMN_02425 1123487.KB892863_gene1964 0.0 1307.4 Rhodocyclales nirB 1.7.1.15 ko:K00362 ko00910,ko01120,map00910,map01120 M00530 R00787 RC00176 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW58@1224,2KUS5@206389,2VIEA@28216,COG1251@1,COG1251@2 NA|NA|NA C nitrite reductase NAD(P)H HGDHCNMN_02426 62928.azo3372 4.3e-52 211.1 Rhodocyclales dsbB ko:K03611 ko00000,ko03110 5.A.2.1 Bacteria 1RIJE@1224,2KWY0@206389,2VREE@28216,COG1495@1,COG1495@2 NA|NA|NA C Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein HGDHCNMN_02427 365046.Rta_22260 2.8e-15 89.4 Comamonadaceae Bacteria 1N0XG@1224,2E1GC@1,2VX7K@28216,32WUU@2,4AFSZ@80864 NA|NA|NA HGDHCNMN_02428 748247.AZKH_3583 4.4e-142 510.8 Rhodocyclales argB GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0030312,GO:0031406,GO:0034618,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.7.2.8 ko:K00930,ko:K14682 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R00259,R02649 RC00002,RC00004,RC00043,RC00064 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS10565,iJN678.argB,iLJ478.TM1784 Bacteria 1MU17@1224,2KVGB@206389,2VIIY@28216,COG0548@1,COG0548@2 NA|NA|NA F Belongs to the acetylglutamate kinase family. ArgB subfamily HGDHCNMN_02429 62928.azo3243 2.7e-54 218.0 Rhodocyclales ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Bacteria 1N1RF@1224,2KWPP@206389,2VT18@28216,COG0071@1,COG0071@2 NA|NA|NA O Belongs to the small heat shock protein (HSP20) family HGDHCNMN_02430 497321.C664_12955 1.4e-14 85.1 Rhodocyclales Bacteria 1NJ5A@1224,2DRVR@1,2KZK5@206389,2WDK2@28216,33DAW@2 NA|NA|NA S Cysteine-rich CWC HGDHCNMN_02431 1454004.AW11_02808 2.8e-44 184.9 unclassified Betaproteobacteria nudB GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008828,GO:0009058,GO:0009108,GO:0009110,GO:0009396,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017144,GO:0018130,GO:0019177,GO:0019438,GO:0019752,GO:0034641,GO:0042364,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046655,GO:0046656,GO:0046872,GO:0047429,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.3.1.181,3.6.1.13,3.6.1.55,3.6.1.67 ko:K01515,ko:K03574,ko:K03801,ko:K08310 ko00230,ko00785,ko00790,ko01100,map00230,map00785,map00790,map01100 M00126 R01054,R04638,R07766,R07769 RC00002,RC00039,RC00992,RC02867 ko00000,ko00001,ko00002,ko01000,ko03400 iSFV_1184.SFV_1867,iSF_1195.SF1875,iSFxv_1172.SFxv_2099,iS_1188.S1941,iY75_1357.Y75_RS09795,iYL1228.KPN_02379 Bacteria 1KQXY@119066,1RH6N@1224,2VR3U@28216,COG0494@1,COG0494@2 NA|NA|NA L NUDIX domain HGDHCNMN_02432 76114.ebA4336 5.9e-31 140.6 Rhodocyclales Bacteria 1RD25@1224,2M03K@206389,2VWTV@28216,COG2732@1,COG2732@2 NA|NA|NA K Barstar (barnase inhibitor) HGDHCNMN_02433 640081.Dsui_1314 2e-32 145.2 Rhodocyclales rnaSA GO:0005575,GO:0005576 3.1.27.3 ko:K01167,ko:K15125 ko05133,map05133 ko00000,ko00001,ko00536,ko01000,ko03016,ko03019 Bacteria 1MZEZ@1224,2KWVU@206389,2VTZ7@28216,COG4290@1,COG4290@2 NA|NA|NA F Guanyl-specific ribonuclease Sa HGDHCNMN_02434 62928.azo3240 2.6e-153 548.9 Rhodocyclales M1-734 ko:K07272,ko:K13486,ko:K20543,ko:K21007 ko02020,ko02025,map02020,map02025 ko00000,ko00001,ko01000,ko01003,ko01005,ko02000 1.B.55.3 Bacteria 1QVCR@1224,2KVJE@206389,2WGQK@28216,COG2199@1,COG3706@2,COG5010@1,COG5010@2 NA|NA|NA T regulator HGDHCNMN_02435 85643.Tmz1t_1170 0.0 1076.2 Rhodocyclales aspS GO:0003674,GO:0003824,GO:0004812,GO:0004815,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006422,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.12 ko:K01876 ko00970,map00970 M00359,M00360 R05577 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 iJN678.aspS,iSFV_1184.SFV_1868 Bacteria 1MUXB@1224,2KV0F@206389,2VHKQ@28216,COG0173@1,COG0173@2 NA|NA|NA J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) HGDHCNMN_02436 305700.B447_16562 2e-80 305.4 Rhodocyclales Bacteria 1MWT5@1224,2KV5C@206389,2VH65@28216,COG2928@1,COG2928@2 NA|NA|NA S Protein of unknown function (DUF502) HGDHCNMN_02437 62928.azo3237 3.9e-30 137.1 Rhodocyclales Bacteria 1N6Q9@1224,2KXAG@206389,2VTX5@28216,COG2331@1,COG2331@2 NA|NA|NA S Putative regulatory protein HGDHCNMN_02438 76114.ebA4343 2.5e-118 431.8 Rhodocyclales pilD 3.4.23.43 ko:K02278,ko:K02654 M00331 ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 3.A.15.2 Bacteria 1MUZF@1224,2KVU7@206389,2VI08@28216,COG1989@1,COG1989@2 NA|NA|NA NOU Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue HGDHCNMN_02439 62928.azo3235 1.8e-170 605.5 Rhodocyclales pilC GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009297,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032940,GO:0033036,GO:0042886,GO:0043711,GO:0044085,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0098776 ko:K02455,ko:K02653 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1MV4U@1224,2KUZY@206389,2VHPE@28216,COG1459@1,COG1459@2 NA|NA|NA U type II secretion system protein HGDHCNMN_02440 62928.azo3234 2.2e-262 911.4 Rhodocyclales pilB ko:K02652 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1MU7V@1224,2KUK3@206389,2VHQ1@28216,COG2804@1,COG2804@2 NA|NA|NA NU COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB HGDHCNMN_02441 85643.Tmz1t_1176 2.2e-155 555.4 Rhodocyclales yfjD GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03699 ko00000,ko02042 Bacteria 1NZ99@1224,2KV1H@206389,2WGFR@28216,COG4536@1,COG4536@2 NA|NA|NA P Transporter associated domain HGDHCNMN_02442 62928.azo3233 1.7e-92 345.9 Rhodocyclales ypjD GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1R3YD@1224,2KW12@206389,2VK0H@28216,COG4137@1,COG4137@2 NA|NA|NA S Cytochrome C assembly protein HGDHCNMN_02443 62928.azo3232 9.5e-213 746.1 Rhodocyclales ffh GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030312,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0040007,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904 3.6.5.4 ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko01000,ko02044 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 Bacteria 1MVIA@1224,2KUVT@206389,2VJ3W@28216,COG0541@1,COG0541@2 NA|NA|NA U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components HGDHCNMN_02444 1057002.KB905370_gene1316 2.8e-56 226.5 Rhizobiaceae virA 2.7.13.3 ko:K02482,ko:K10819 ko00000,ko01000,ko01001,ko02022 Bacteria 1RCM9@1224,2TR8X@28211,4B9N5@82115,COG2202@1,COG2202@2,COG3850@1,COG3850@2,COG4191@1,COG4191@2 NA|NA|NA T Histidine kinase HGDHCNMN_02445 196490.AUEZ01000009_gene5245 5.1e-10 71.6 Bradyrhizobiaceae cpaA 3.4.23.43 ko:K02278 ko00000,ko01000,ko02035,ko02044 Bacteria 1RAYG@1224,2TSVX@28211,3JYGP@41294,COG4960@1,COG4960@2 NA|NA|NA OU Type IV leader peptidase family HGDHCNMN_02446 93220.LV28_00735 4.8e-34 150.6 Burkholderiaceae MA20_41450 Bacteria 1K7NX@119060,1N083@1224,2VUF2@28216,COG3737@1,COG3737@2 NA|NA|NA S Protein of unknown function (DUF498/DUF598) HGDHCNMN_02447 999541.bgla_1g23330 3.5e-58 231.1 Burkholderiaceae bcp GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 ko:K03564 ko00000,ko01000 Bacteria 1K1Y3@119060,1RD4R@1224,2VR4P@28216,COG1225@1,COG1225@2 NA|NA|NA O PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen HGDHCNMN_02448 375286.mma_1308 2.3e-213 748.4 Oxalobacteraceae phoH ko:K07175 ko00000 Bacteria 1MUX1@1224,2VH4P@28216,472JA@75682,COG1875@1,COG1875@2 NA|NA|NA T Large family of predicted nucleotide-binding domains HGDHCNMN_02449 1121035.AUCH01000001_gene1956 5.3e-174 619.0 Rhodocyclales Bacteria 1R5EN@1224,2KY2U@206389,2WGK9@28216,COG5002@1,COG5002@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_02450 1485544.JQKP01000005_gene412 8.1e-103 380.6 Nitrosomonadales selU GO:0001887,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016785,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043828,GO:0044237,GO:0044238,GO:0046483,GO:0070329,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 ko:K06917 ko00000,ko01000,ko03016 Bacteria 1N4T5@1224,2VIMH@28216,44VMP@713636,COG2603@1,COG2603@2 NA|NA|NA H Rhodanese Homology Domain HGDHCNMN_02451 1123487.KB892864_gene2097 1.1e-134 486.5 Rhodocyclales selD 2.7.9.3 ko:K01008 ko00450,ko01100,map00450,map01100 R03595 RC00002,RC02878 ko00000,ko00001,ko01000,ko03016 Bacteria 1MWFG@1224,2KUV8@206389,2VJSD@28216,COG0709@1,COG0709@2 NA|NA|NA F Synthesizes selenophosphate from selenide and ATP HGDHCNMN_02452 1366050.N234_06795 9.2e-225 786.2 Burkholderiaceae cat1 2.8.3.18,3.1.2.1 ko:K01067,ko:K18118 ko00020,ko00620,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00650,map01100,map01110,map01120,map01130,map01200 M00009,M00011 R00227,R10343 RC00004,RC00012,RC00014 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1125 Bacteria 1K1SE@119060,1MUGE@1224,2VJUB@28216,COG0427@1,COG0427@2 NA|NA|NA C acetyl-CoA hydrolase HGDHCNMN_02453 977880.RALTA_B1180 2.8e-96 358.6 Burkholderiaceae ywbI Bacteria 1KGH0@119060,1NUAB@1224,2VNR5@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_02454 1304883.KI912532_gene3018 9.5e-61 239.6 Rhodocyclales ydeM Bacteria 1RIBV@1224,2KW8E@206389,2VTGX@28216,COG2030@1,COG2030@2 NA|NA|NA I MaoC like domain HGDHCNMN_02455 748247.AZKH_0152 6.4e-93 347.1 Rhodocyclales estB ko:K06999 ko00000 Bacteria 1RA02@1224,2KW7N@206389,2VJ6G@28216,COG0400@1,COG0400@2 NA|NA|NA S Carboxylesterase HGDHCNMN_02456 62928.azo2201 8.5e-252 876.3 Rhodocyclales ko:K07182 ko00000 Bacteria 1MW8U@1224,2KVCU@206389,2VHE1@28216,COG2905@1,COG2905@2 NA|NA|NA T signal-transduction protein containing cAMP-binding and CBS domains HGDHCNMN_02457 497321.C664_06658 3.6e-37 161.8 Rhodocyclales polC1 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1RCPS@1224,2KWY4@206389,2WEFW@28216,COG0847@1,COG0847@2 NA|NA|NA L DNA polymerase III, epsilon HGDHCNMN_02458 640081.Dsui_0305 3.7e-91 341.7 Rhodocyclales Bacteria 1RAY4@1224,2KUDY@206389,2VKMK@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HGDHCNMN_02459 1121035.AUCH01000004_gene293 1.3e-49 203.4 Rhodocyclales ko:K07090 ko00000 Bacteria 1MX4T@1224,2KWJ0@206389,2VRZJ@28216,COG0730@1,COG0730@2 NA|NA|NA S Sulfite exporter TauE/SafE HGDHCNMN_02460 1123487.KB892835_gene3630 2e-64 252.3 Rhodocyclales ompW1 ko:K07275 ko00000 Bacteria 1NUZJ@1224,2M01P@206389,2VS6T@28216,COG3047@1,COG3047@2 NA|NA|NA M OmpW family HGDHCNMN_02461 1121035.AUCH01000012_gene3045 0.0 1261.1 Betaproteobacteria ko:K07012 ko00000,ko01000,ko02048 Bacteria 1MVZF@1224,2VHZ8@28216,COG1203@1,COG1203@2 NA|NA|NA L CRISPR-associated helicase, Cas3 HGDHCNMN_02462 1121035.AUCH01000012_gene3044 2.4e-129 468.8 Betaproteobacteria Bacteria 1RIFD@1224,2DM2M@1,2W2JP@28216,31GIF@2 NA|NA|NA S CRISPR-associated protein (Cas_Csy1) HGDHCNMN_02463 1121035.AUCH01000012_gene3043 2.5e-102 378.6 Betaproteobacteria csy2 ko:K19128 ko00000,ko02048 Bacteria 1RJGK@1224,2BA8I@1,2W3EG@28216,323NM@2 NA|NA|NA S CRISPR-associated protein (Cas_Csy2) HGDHCNMN_02464 1121035.AUCH01000012_gene3042 9.7e-168 596.3 Betaproteobacteria csy3 ko:K19129 ko00000,ko02048 Bacteria 1MWE9@1224,2DB80@1,2VM1K@28216,2Z7PG@2 NA|NA|NA S CRISPR-associated protein, Csy3 family HGDHCNMN_02465 1121035.AUCH01000012_gene3041 2.3e-61 241.9 Betaproteobacteria csy4 Bacteria 1NB5M@1224,2EC1T@1,2W4RA@28216,3360Y@2 NA|NA|NA L CRISPR-associated protein (Cas_Csy4) HGDHCNMN_02466 1121035.AUCH01000012_gene3040 1.7e-147 528.9 Betaproteobacteria cas1 ko:K15342 ko00000,ko02048,ko03400 Bacteria 1MUXH@1224,2VMT9@28216,COG1518@1,COG1518@2 NA|NA|NA L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette HGDHCNMN_02467 314265.R2601_23383 1e-42 180.6 Proteobacteria Bacteria 1P39H@1224,2BZW5@1,333S6@2 NA|NA|NA HGDHCNMN_02468 243365.CV_1121 0.0 1368.6 Neisseriales acnA 4.2.1.3 ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173,M00740 R01324,R01325,R01900 RC00497,RC00498,RC00618 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1MU9T@1224,2KQQU@206351,2VKDZ@28216,COG1048@1,COG1048@2 NA|NA|NA C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate HGDHCNMN_02469 1232410.KI421424_gene1816 7.2e-23 114.8 Proteobacteria Bacteria 1PAKN@1224,2BX8Y@1,2ZV9Y@2 NA|NA|NA HGDHCNMN_02470 1223521.BBJX01000011_gene9 6.3e-89 334.3 Betaproteobacteria ko:K07133 ko00000 Bacteria 1R4HK@1224,2VMYI@28216,COG1373@1,COG1373@2 NA|NA|NA S ATPase (AAA superfamily HGDHCNMN_02471 1238182.C882_1029 6.3e-20 103.2 Rhodospirillales Bacteria 1NAEB@1224,2EB0P@1,2JUS0@204441,2UG0E@28211,3351I@2 NA|NA|NA HGDHCNMN_02472 497321.C664_09285 2.7e-105 388.7 Rhodocyclales fprA1 3.1.2.6 ko:K01069 ko00620,map00620 R01736 RC00004,RC00137 ko00000,ko00001,ko01000 Bacteria 1MXKX@1224,2KVMB@206389,2VIZ8@28216,COG0491@1,COG0491@2 NA|NA|NA S Beta-lactamase HGDHCNMN_02473 1502851.FG93_02764 2.3e-16 92.0 Bradyrhizobiaceae ybaN ko:K09790 ko00000 Bacteria 1N7BI@1224,2UFAC@28211,3JZMV@41294,COG2832@1,COG2832@2 NA|NA|NA S Protein of unknown function (DUF454) HGDHCNMN_02474 765913.ThidrDRAFT_0943 5.5e-34 150.6 Chromatiales modE ko:K02019 ko00000,ko03000 Bacteria 1N7IB@1224,1S7IP@1236,1X0YQ@135613,COG3585@1,COG3585@2 NA|NA|NA H TIGRFAM Molybdenum-pterin binding HGDHCNMN_02475 640081.Dsui_0561 1.4e-97 362.8 Rhodocyclales modE GO:0003674,GO:0005488,GO:0005515,GO:0042802 ko:K02019,ko:K05772 ko02010,map02010 M00186 ko00000,ko00001,ko00002,ko02000,ko03000 3.A.1.6.2,3.A.1.6.4 Bacteria 1P9SX@1224,2KUFB@206389,2VMCH@28216,COG2005@1,COG2005@2,COG3585@1,COG3585@2 NA|NA|NA H TOBE domain HGDHCNMN_02476 365044.Pnap_2037 9.3e-85 320.1 Comamonadaceae modA GO:0003674,GO:0005488,GO:0030973,GO:0043167,GO:0043168 ko:K02018,ko:K02020 ko02010,map02010 M00189 ko00000,ko00001,ko00002,ko02000 3.A.1.8 Bacteria 1MVNA@1224,2VJEC@28216,4AC9G@80864,COG0725@1,COG0725@2 NA|NA|NA P TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein HGDHCNMN_02477 1502852.FG94_02416 4.2e-84 317.8 Oxalobacteraceae modB ko:K02018,ko:K15496 ko02010,map02010 M00189,M00423 ko00000,ko00001,ko00002,ko02000 3.A.1.6.5,3.A.1.8 Bacteria 1MUXR@1224,2VIZW@28216,4731K@75682,COG4149@1,COG4149@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component HGDHCNMN_02478 1218352.B597_018390 5.3e-126 457.6 Pseudomonas stutzeri group modC GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015098,GO:0015103,GO:0015318,GO:0015399,GO:0015405,GO:0015412,GO:0015689,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0099133 3.6.3.29 ko:K02017 ko02010,map02010 M00189 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.8 Bacteria 1MU8K@1224,1RQCV@1236,1Z0IP@136846,COG4148@1,COG4148@2 NA|NA|NA P Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system HGDHCNMN_02479 159087.Daro_3017 1.6e-203 715.7 Betaproteobacteria 2.7.13.3 ko:K02482 ko00000,ko01000,ko01001,ko02022 Bacteria 1RCM9@1224,2VHTK@28216,COG4191@1,COG4191@2 NA|NA|NA T Histidine kinase HGDHCNMN_02480 1298593.TOL_3338 9.2e-196 690.3 Oceanospirillales oprC ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1MW7D@1224,1RNET@1236,1XI9Q@135619,COG1629@1,COG4771@2 NA|NA|NA P TonB dependent receptor HGDHCNMN_02481 243365.CV_1417 8.5e-12 77.4 Neisseriales ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2KSWZ@206351,2VGZ8@28216,COG0840@1,COG0840@2 NA|NA|NA NT Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). HGDHCNMN_02482 358220.C380_08515 2.5e-55 222.6 Comamonadaceae 1.16.3.1 ko:K03594 ko00860,map00860 R00078 RC02758 ko00000,ko00001,ko01000 Bacteria 1RGZG@1224,2VSVM@28216,4ABHC@80864,COG1633@1,COG1633@2,COG3861@1,COG3861@2 NA|NA|NA S Domain of unknown function (DUF2383) HGDHCNMN_02483 76114.ebA1283 1.7e-146 525.8 Rhodocyclales degS GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0051716,GO:0051788,GO:0061077,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.107 ko:K04691,ko:K04771,ko:K04772 ko01503,ko02020,map01503,map02020 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1MU63@1224,2KV5H@206389,2VJ9G@28216,COG0265@1,COG0265@2 NA|NA|NA O Belongs to the peptidase S1C family HGDHCNMN_02484 1454004.AW11_01506 3.6e-97 361.3 unclassified Betaproteobacteria ybgI GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0042802,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0050896 3.5.4.16 ko:K22391 ko00790,ko01100,map00790,map01100 M00126 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 Bacteria 1KPX2@119066,1MVUN@1224,2VIX1@28216,COG0327@1,COG0327@2 NA|NA|NA S SecretomeP prediction HGDHCNMN_02485 748247.AZKH_0769 2e-72 280.4 Rhodocyclales ko:K08086 ko00000 Bacteria 1RE27@1224,2KW0V@206389,2VRNH@28216,COG3170@1,COG3170@2 NA|NA|NA NU Tfp pilus assembly protein FimV HGDHCNMN_02486 305700.B447_12874 1.4e-65 255.8 Rhodocyclales Bacteria 1REWN@1224,2BZNP@1,2KWHQ@206389,2VRZH@28216,30717@2 NA|NA|NA S Protein of unknown function (DUF2889) HGDHCNMN_02487 1304883.KI912532_gene1682 4.8e-205 720.3 Rhodocyclales sucC GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2261,iYO844.BSU16090 Bacteria 1MVCE@1224,2KV9X@206389,2VHBG@28216,COG0045@1,COG0045@2 NA|NA|NA F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit HGDHCNMN_02488 1121035.AUCH01000015_gene2497 2.3e-159 568.2 Rhodocyclales sucD GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5 ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 iYO844.BSU16100 Bacteria 1MUGA@1224,2KUAR@206389,2VH1U@28216,COG0074@1,COG0074@2 NA|NA|NA C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit HGDHCNMN_02489 159087.Daro_3361 7.6e-124 450.3 Rhodocyclales ocd 1.4.1.1,4.3.1.12 ko:K01750,ko:K19244 ko00250,ko00330,ko00430,ko01100,ko01110,ko01130,ko01230,map00250,map00330,map00430,map01100,map01110,map01130,map01230 R00396,R00671 RC00008,RC00354 ko00000,ko00001,ko01000 Bacteria 1N3EI@1224,2KVWM@206389,2WFNY@28216,COG2423@1,COG2423@2 NA|NA|NA E Ornithine cyclodeaminase/mu-crystallin family HGDHCNMN_02490 159087.Daro_3360 5e-84 317.8 Rhodocyclales pppL 3.1.3.16 ko:K01090,ko:K20074 ko00000,ko01000,ko01009 Bacteria 1R7UF@1224,2KUQG@206389,2VM6F@28216,COG0631@1,COG0631@2 NA|NA|NA T Serine/threonine phosphatases, family 2C, catalytic domain HGDHCNMN_02491 159087.Daro_3359 3.4e-81 308.1 Rhodocyclales Bacteria 1MW1M@1224,2KUV6@206389,2VJ1K@28216,COG1716@1,COG1716@2 NA|NA|NA T (FHA) domain HGDHCNMN_02492 1121035.AUCH01000015_gene2502 5.9e-212 744.2 Rhodocyclales cyaA 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV1V@1224,2KVW3@206389,2VJ72@28216,COG2114@1,COG2114@2,COG4252@1,COG4252@2 NA|NA|NA T CHASE2 HGDHCNMN_02493 329726.AM1_4516 6.7e-08 65.1 Cyanobacteria Bacteria 1G77R@1117,29WNB@1,30I96@2 NA|NA|NA HGDHCNMN_02494 572477.Alvin_2061 3.3e-59 234.6 Chromatiales adiA 4.1.1.19 ko:K01584,ko:K01585 ko00330,ko01100,map00330,map01100 M00133 R00566 RC00299 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWK4@1224,1RMVF@1236,1WXY3@135613,COG1982@1,COG1982@2 NA|NA|NA E PFAM Orn Lys Arg decarboxylase HGDHCNMN_02495 402626.Rpic_3510 9.3e-60 238.4 Burkholderiaceae Bacteria 1K3RG@119060,1N941@1224,2VIKR@28216,COG3712@1,COG3712@2 NA|NA|NA PT Membrane HGDHCNMN_02496 85643.Tmz1t_1589 1.7e-88 332.0 Rhodocyclales dcd GO:0003674,GO:0003824,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.5.4.13 ko:K01494 ko00240,ko01100,map00240,map01100 M00053 R00568,R02325 RC00074 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV2J@1224,2KU9E@206389,2VIJ0@28216,COG0717@1,COG0717@2 NA|NA|NA F Belongs to the dCTP deaminase family HGDHCNMN_02498 76114.ebA4409 4.5e-160 570.9 Rhodocyclales mrp ko:K03593 ko00000,ko03029,ko03036 Bacteria 1MU7R@1224,2KV2W@206389,2VIMV@28216,COG0489@1,COG0489@2 NA|NA|NA D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP HGDHCNMN_02499 497321.C664_12645 0.0 1127.5 Rhodocyclales metG GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10,6.1.1.20 ko:K01874,ko:K01890,ko:K06878 ko00450,ko00970,map00450,map00970 M00359,M00360 R03659,R03660,R04773 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iEC042_1314.EC042_2346,iECUMN_1333.ECUMN_2446 Bacteria 1MUBY@1224,2KUGX@206389,2VH19@28216,COG0073@1,COG0073@2,COG0143@1,COG0143@2 NA|NA|NA J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation HGDHCNMN_02501 1121035.AUCH01000005_gene133 7.1e-218 763.5 Rhodocyclales sulP GO:0003333,GO:0003674,GO:0005215,GO:0005310,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008272,GO:0008509,GO:0008514,GO:0015075,GO:0015103,GO:0015116,GO:0015138,GO:0015141,GO:0015171,GO:0015172,GO:0015179,GO:0015183,GO:0015238,GO:0015318,GO:0015556,GO:0015698,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015800,GO:0015807,GO:0015810,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070778,GO:0071422,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:0098660,GO:0098661,GO:1901682,GO:1902358,GO:1902475,GO:1903825,GO:1905039 ko:K03321 ko00000,ko02000 2.A.53.3 iSbBS512_1146.SbBS512_E1370 Bacteria 1MVWV@1224,2KVVX@206389,2VH45@28216,COG0659@1,COG0659@2 NA|NA|NA P COG0659 Sulfate permease and related transporters (MFS superfamily) HGDHCNMN_02502 596153.Alide_0013 2.2e-18 98.2 Comamonadaceae acyP 3.6.1.7 ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 R00317,R01421,R01515 RC00043 ko00000,ko00001,ko01000 Bacteria 1N6NU@1224,2VVRU@28216,4AFGX@80864,COG1254@1,COG1254@2 NA|NA|NA C Belongs to the acylphosphatase family HGDHCNMN_02503 1286631.X805_37150 5.8e-22 113.2 Betaproteobacteria Bacteria 1P5QE@1224,2DFIV@1,2W60V@28216,2ZS11@2 NA|NA|NA HGDHCNMN_02504 156889.Mmc1_2172 1.1e-21 113.2 Alphaproteobacteria ko:K15125 ko05133,map05133 ko00000,ko00001,ko00536 Bacteria 1MXIP@1224,2TTVB@28211,COG3210@1,COG3210@2 NA|NA|NA U TIGRFAM filamentous haemagglutinin family outer membrane protein HGDHCNMN_02505 62928.azo3627 2.4e-52 212.6 Rhodocyclales slt_1 ko:K08309 ko00000,ko01000,ko01011 GH23 Bacteria 1MZ4X@1224,2KV7Z@206389,2VM6E@28216,COG0741@1,COG0741@2 NA|NA|NA M Lytic transglycosylase HGDHCNMN_02506 1121035.AUCH01000007_gene530 3.9e-41 174.9 Proteobacteria ko:K07052,ko:K09696 ko02010,ko02020,map02010,map02020 M00253 ko00000,ko00001,ko00002,ko02000 3.A.1.115 Bacteria 1QVRB@1224,COG1266@1,COG1266@2 NA|NA|NA S CAAX protease self-immunity HGDHCNMN_02507 1304883.KI912532_gene2561 2.1e-211 742.7 Betaproteobacteria ko:K02660,ko:K11525 ko02020,ko02025,map02020,map02025 ko00000,ko00001,ko02035,ko02044 Bacteria 1RCM9@1224,2WGMB@28216,COG0642@1,COG2205@2,COG4191@1,COG4191@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_02508 62928.azo2378 2.9e-73 281.6 Rhodocyclales acpH GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008081,GO:0008150,GO:0008152,GO:0008610,GO:0008770,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0016788,GO:0019752,GO:0032787,GO:0042578,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:0140096,GO:1901576 3.1.4.14 ko:K08682 ko00770,map00770 R01623 ko00000,ko00001,ko01000 iAPECO1_1312.APECO1_1606,iE2348C_1286.E2348C_0339,iECNA114_1301.ECNA114_0381,iECOK1_1307.ECOK1_0384,iECS88_1305.ECS88_0399,iECSF_1327.ECSF_0364,iPC815.YPO3193,iUMN146_1321.UM146_15340,iUTI89_1310.UTI89_C0426 Bacteria 1MZ59@1224,2KZUQ@206389,2VRTV@28216,COG3124@1,COG3124@2 NA|NA|NA S Acyl carrier protein phosphodiesterase HGDHCNMN_02509 1472716.KBK24_0118435 2e-45 188.7 Burkholderiaceae lrp ko:K03719 ko00000,ko03000,ko03036 Bacteria 1K1V3@119060,1MX7R@1224,2VQPG@28216,COG1522@1,COG1522@2 NA|NA|NA K PFAM regulatory protein AsnC Lrp family HGDHCNMN_02510 1304883.KI912532_gene2796 2.6e-20 105.5 Rhodocyclales Bacteria 1N6PJ@1224,2KX8F@206389,2VW8V@28216,COG3678@1,COG3678@2 NA|NA|NA NPTU Heavy-metal resistance HGDHCNMN_02511 1163617.SCD_n00796 9e-79 301.2 Betaproteobacteria bepA GO:0003674,GO:0003756,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016043,GO:0016787,GO:0016853,GO:0016860,GO:0016864,GO:0019538,GO:0022607,GO:0030163,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043163,GO:0043165,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044464,GO:0045229,GO:0046872,GO:0051603,GO:0061024,GO:0061077,GO:0070011,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564,GO:1901565,GO:1901575 Bacteria 1MVFV@1224,2VHAY@28216,COG4783@1,COG4783@2 NA|NA|NA S peptidase m48, ste24p HGDHCNMN_02512 1454004.AW11_02766 5.5e-92 344.0 Betaproteobacteria Bacteria 1MVCB@1224,2VJB0@28216,COG0745@1,COG0745@2 NA|NA|NA KT response regulator HGDHCNMN_02513 1454004.AW11_02765 1.3e-122 446.8 Betaproteobacteria Bacteria 1N17V@1224,2WEJE@28216,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_02514 76114.ebA1203 2.5e-214 751.9 Rhodocyclales dnaX GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0042575,GO:0042802,GO:0043170,GO:0043846,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050790,GO:0061695,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MVCK@1224,2KUDK@206389,2VIE0@28216,COG2812@1,COG2812@2 NA|NA|NA H DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity HGDHCNMN_02515 748247.AZKH_0854 2.3e-48 198.0 Rhodocyclales ybaB GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 ko:K06187,ko:K09747 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 1RGZD@1224,2KWKM@206389,2VSJ2@28216,COG0718@1,COG0718@2 NA|NA|NA S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection HGDHCNMN_02516 748247.AZKH_0855 4.6e-87 327.4 Rhodocyclales recR GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 1MV9Q@1224,2KV35@206389,2VJVJ@28216,COG0353@1,COG0353@2 NA|NA|NA L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO HGDHCNMN_02517 159087.Daro_3113 2.5e-180 638.3 Rhodocyclales frc 2.8.3.16 ko:K07749 ko00000,ko01000 Bacteria 1MU2K@1224,2KUX0@206389,2VHB0@28216,COG1804@1,COG1804@2 NA|NA|NA C CoA-transferase family III HGDHCNMN_02518 1123487.KB892866_gene1672 9.4e-157 559.7 Rhodocyclales galE 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUHI@1224,2KUVW@206389,2VIN9@28216,COG1087@1,COG1087@2 NA|NA|NA M UDP-glucose 4-epimerase HGDHCNMN_02519 497321.C664_03160 3.9e-47 194.1 Rhodocyclales ko:K09966 ko00000 Bacteria 1RH68@1224,2KWXX@206389,2VSN3@28216,COG3651@1,COG3651@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_02520 748247.AZKH_4231 8.7e-116 424.1 Rhodocyclales dacB 3.4.16.4 ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria 1MW40@1224,2KUH9@206389,2VH20@28216,COG2027@1,COG2027@2 NA|NA|NA M D-Ala-D-Ala carboxypeptidase HGDHCNMN_02521 497321.C664_10453 4.6e-87 327.4 Rhodocyclales petA 1.10.2.2 ko:K00411 ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152 ko00000,ko00001,ko00002,ko01000 Bacteria 1RAA2@1224,2KVZE@206389,2VK46@28216,COG0723@1,COG0723@2 NA|NA|NA C Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis HGDHCNMN_02522 748247.AZKH_0857 6.7e-229 799.7 Rhodocyclales petB ko:K00410,ko:K00412,ko:K02635,ko:K02637 ko00190,ko00195,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map00195,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152,M00162 ko00000,ko00001,ko00002,ko00194,ko03029 Bacteria 1MV97@1224,2KUBF@206389,2VHP5@28216,COG1290@1,COG1290@2 NA|NA|NA C Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis HGDHCNMN_02523 62928.azo0962 2e-100 372.1 Rhodocyclales petC ko:K00410,ko:K00412,ko:K00413 ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152 ko00000,ko00001,ko00002,ko03029 iIT341.HP1538 Bacteria 1QFU2@1224,2KUIS@206389,2VIR6@28216,COG2857@1,COG2857@2 NA|NA|NA P Cytochrome C1 HGDHCNMN_02524 497321.C664_10438 6e-103 380.2 Rhodocyclales sspA GO:0001000,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006950,GO:0008150,GO:0009605,GO:0009889,GO:0009891,GO:0009893,GO:0009991,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0042594,GO:0043175,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070063,GO:0080090,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 ko:K03599 ko00000,ko02000,ko03021 1.A.12.3.1 Bacteria 1MXJD@1224,2KUQK@206389,2VIAW@28216,COG0625@1,COG0625@2 NA|NA|NA O Belongs to the GST superfamily HGDHCNMN_02525 748247.AZKH_0860 1.3e-41 176.0 Rhodocyclales sspB GO:0000502,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0009376,GO:0009893,GO:0009894,GO:0009896,GO:0010604,GO:0019222,GO:0019899,GO:0031597,GO:0032781,GO:0032991,GO:0042176,GO:0042802,GO:0042803,GO:0043085,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043462,GO:0044093,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0045732,GO:0046983,GO:0048518,GO:0050789,GO:0050790,GO:0051117,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0097159,GO:1901363,GO:1902494,GO:1904949,GO:1905368,GO:1905369,GO:1990904 ko:K03600,ko:K09985 ko00000,ko03021 Bacteria 1MZ2Q@1224,2KX0Y@206389,2VSGG@28216,COG2969@1,COG2969@2 NA|NA|NA S stringent starvation protein B HGDHCNMN_02526 62928.azo0966 1.6e-40 172.6 Rhodocyclales ko:K07216 ko00000 Bacteria 1N5KC@1224,2KZU0@206389,2VV3W@28216,COG2703@1,COG2703@2 NA|NA|NA P Hemerythrin HHE cation binding domain HGDHCNMN_02527 1218075.BAYA01000001_gene196 3.3e-17 94.7 Burkholderiaceae yhdN Bacteria 1K7Q8@119060,1NAHU@1224,2D7FD@1,2VWNF@28216,32TNY@2 NA|NA|NA S Domain of unknown function (DUF1992) HGDHCNMN_02528 1000565.METUNv1_02399 6.4e-61 241.1 Rhodocyclales Bacteria 1RJ1B@1224,2KWP1@206389,2VTGM@28216,COG5581@1,COG5581@2 NA|NA|NA M Flagellar protein YcgR HGDHCNMN_02529 1123487.KB892849_gene287 1e-139 503.4 Rhodocyclales dadA 1.4.5.1 ko:K00285 ko00360,map00360 R01374,R09493 RC00006,RC00025 ko00000,ko00001,ko01000 Bacteria 1MVIZ@1224,2KVKS@206389,2VH1D@28216,COG0665@1,COG0665@2 NA|NA|NA C D-amino acid dehydrogenase HGDHCNMN_02530 62928.azo0968 3.5e-156 557.8 Rhodocyclales fbp GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 ko:K03841 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910 M00003,M00165,M00167,M00344 R00762,R04780 RC00017 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MW0E@1224,2KUG8@206389,2VIJT@28216,COG0158@1,COG0158@2 NA|NA|NA G D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 HGDHCNMN_02531 62928.azo0969 1.2e-161 576.6 Rhodocyclales ytfM GO:0002790,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009279,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031975,GO:0032940,GO:0032991,GO:0033036,GO:0042886,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045203,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0097347 ko:K07278 ko00000,ko02000 1.B.33.2.4 Bacteria 1MUKM@1224,2KV5Q@206389,2VHW1@28216,COG0729@1,COG0729@2 NA|NA|NA M surface antigen (D15) HGDHCNMN_02532 497321.C664_17787 1.2e-33 149.1 Rhodocyclales nirM ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 Bacteria 1N6UN@1224,2KZ1V@206389,2VW1Y@28216,COG4654@1,COG4654@2 NA|NA|NA C Cytochrome c HGDHCNMN_02533 697282.Mettu_4180 3.1e-62 244.6 Methylococcales Bacteria 1R9WZ@1224,1S6MP@1236,1XF7P@135618,COG3837@1,COG3837@2 NA|NA|NA S Cupin domain HGDHCNMN_02534 1304883.KI912532_gene1874 4e-149 534.6 Rhodocyclales rpfG GO:0003674,GO:0003824,GO:0004112,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009187,GO:0009214,GO:0009987,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 Bacteria 1R53C@1224,2KW0J@206389,2VNCZ@28216,COG2206@1,COG2206@2,COG3437@1,COG3437@2 NA|NA|NA T Metal dependent phosphohydrolases with conserved 'HD' motif. HGDHCNMN_02535 365044.Pnap_0468 7e-26 123.2 Betaproteobacteria Bacteria 1RIW0@1224,2VWNP@28216,31669@2,COG1226@1 NA|NA|NA P COG1226 Kef-type K transport systems HGDHCNMN_02537 1276756.AUEX01000006_gene3062 8.8e-77 293.5 Comamonadaceae Bacteria 1MXQ0@1224,2VHRW@28216,4ACDI@80864,COG5534@1,COG5534@2 NA|NA|NA L Replication initiator protein A HGDHCNMN_02538 1045855.DSC_10105 2e-70 272.3 Xanthomonadales ko:K03496 ko00000,ko03036,ko04812 Bacteria 1MV43@1224,1RNJK@1236,1XC6A@135614,COG1192@1,COG1192@2 NA|NA|NA D AAA domain HGDHCNMN_02539 232721.Ajs_2656 4.3e-15 87.0 Comamonadaceae Bacteria 1N99M@1224,2E43J@1,2VW2Q@28216,32YZW@2,4AJGM@80864 NA|NA|NA HGDHCNMN_02540 94624.Bpet4566 9e-30 136.7 Betaproteobacteria Bacteria 1P8PK@1224,2BYDP@1,2VM2Q@28216,2Z7UG@2 NA|NA|NA S Protein of unknown function (DUF2840) HGDHCNMN_02541 76114.ebA6266 3.2e-115 421.4 Rhodocyclales nosY ko:K19341 ko02010,map02010 M00762 ko00000,ko00001,ko00002,ko02000 3.A.1.132.2 Bacteria 1MWUZ@1224,2KVNB@206389,2VJDE@28216,COG1277@1,COG1277@2 NA|NA|NA S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component HGDHCNMN_02542 748247.AZKH_2409 6.2e-51 207.2 Rhodocyclales nosL ko:K19342 ko00000 Bacteria 1RCDR@1224,2KWDR@206389,2VIGY@28216,COG4314@1,COG4314@2 NA|NA|NA C lipoprotein involved in nitrous oxide reduction HGDHCNMN_02543 305700.B447_07679 2.4e-11 74.7 Betaproteobacteria Bacteria 1N926@1224,2CGZ2@1,2VWPJ@28216,330FJ@2 NA|NA|NA HGDHCNMN_02544 292415.Tbd_1396 3.8e-23 114.0 Betaproteobacteria Bacteria 1NBX9@1224,2EDF4@1,2VWIT@28216,337BE@2 NA|NA|NA HGDHCNMN_02545 85643.Tmz1t_3466 3.5e-240 837.8 Rhodocyclales acxR ko:K21405 ko00000,ko03000 Bacteria 1NRG5@1224,2KUJM@206389,2VIQ6@28216,COG3284@1,COG3284@2 NA|NA|NA K Bacterial regulatory protein, Fis family HGDHCNMN_02546 522306.CAP2UW1_1187 2.1e-56 226.1 Betaproteobacteria Bacteria 1RIAI@1224,2C40N@1,2VTU0@28216,32RD3@2 NA|NA|NA HGDHCNMN_02547 748247.AZKH_1206 1.1e-185 656.4 Rhodocyclales glpK GO:0003674,GO:0003824,GO:0004370,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019405,GO:0019563,GO:0019751,GO:0033554,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046174,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:1901575,GO:1901615,GO:1901616 2.7.1.30 ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 R00847 RC00002,RC00017 ko00000,ko00001,ko01000,ko04147 iE2348C_1286.E2348C_4230,iECNA114_1301.ECNA114_4065,iECSF_1327.ECSF_3786 Bacteria 1MUP7@1224,2KV0H@206389,2VICH@28216,COG0554@1,COG0554@2 NA|NA|NA F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate HGDHCNMN_02548 76114.ebA4463 1.2e-182 646.4 Rhodocyclales glpD GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 1.1.5.3 ko:K00111 ko00564,ko01110,map00564,map01110 R00848 RC00029 ko00000,ko00001,ko01000 Bacteria 1MUMY@1224,2KV67@206389,2VN8I@28216,COG0578@1,COG0578@2 NA|NA|NA C FAD dependent oxidoreductase HGDHCNMN_02549 402626.Rpic_3969 3e-110 404.8 Burkholderiaceae cphA 6.3.2.13,6.3.2.29,6.3.2.30 ko:K01928,ko:K03802 ko00300,ko00550,map00300,map00550 R02788 RC00064,RC00090 ko00000,ko00001,ko01000,ko01011 Bacteria 1K58M@119060,1MVN2@1224,2VJMQ@28216,COG0189@1,COG0189@2,COG0769@1,COG0769@2 NA|NA|NA HJM Belongs to the MurCDEF family HGDHCNMN_02550 1266925.JHVX01000005_gene1902 1e-39 171.4 Nitrosomonadales epsH Bacteria 1MXZG@1224,2VMAH@28216,371Y3@32003,COG1269@1,COG1269@2 NA|NA|NA C Protein of unknown function (DUF3485) HGDHCNMN_02551 748247.AZKH_3816 2.7e-200 705.3 Rhodocyclales acoR ko:K21405 ko00000,ko03000 Bacteria 1NRG5@1224,2KXW1@206389,2VICI@28216,COG3284@1,COG3284@2 NA|NA|NA K GAF domain HGDHCNMN_02552 1163398.AJJP01000038_gene4643 1.6e-69 270.0 Proteobacteria acoX Bacteria 1QV26@1224,COG1597@1,COG1597@2 NA|NA|NA I Acetoin catabolism protein HGDHCNMN_02553 748247.AZKH_3815 9e-157 559.7 Rhodocyclales acoA ko:K21416 ko00000,ko01000 Bacteria 1MU5R@1224,2KYIV@206389,2VN57@28216,COG1071@1,COG1071@2 NA|NA|NA C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit HGDHCNMN_02554 1000565.METUNv1_01990 1.8e-160 572.0 Rhodocyclales acoB ko:K21417 ko00000,ko01000 Bacteria 1R8KB@1224,2KY7R@206389,2VKQ0@28216,COG0022@1,COG0022@2 NA|NA|NA C Transketolase, pyrimidine binding domain HGDHCNMN_02555 748247.AZKH_3813 2.2e-146 525.4 Rhodocyclales acoC 1.11.1.10,2.3.1.12,3.8.1.5 ko:K00433,ko:K00627,ko:K01563,ko:K06889 ko00010,ko00020,ko00361,ko00620,ko00625,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00361,map00620,map00625,map01100,map01110,map01120,map01130,map01200 M00307 R00209,R02569,R05284,R05367,R05368,R05369,R05370,R07669,R07670 RC00004,RC01317,RC01340,RC01341,RC02013,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1QV8J@1224,2KXZB@206389,2WHSZ@28216,COG0508@1,COG0508@2,COG2267@1,COG2267@2 NA|NA|NA CI Biotin-requiring enzyme HGDHCNMN_02556 748247.AZKH_3812 7e-130 470.3 Rhodocyclales lipA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 ko:K03644 ko00785,ko01100,map00785,map01100 R07767,R07768 RC01978 ko00000,ko00001,ko01000 Bacteria 1MVRD@1224,2KY16@206389,2VNSK@28216,COG0320@1,COG0320@2 NA|NA|NA H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives HGDHCNMN_02557 748247.AZKH_3811 3e-14 84.0 Betaproteobacteria thiS GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 ko:K03149,ko:K03154 ko00730,ko01100,ko04122,map00730,map01100,map04122 R10247 RC03096,RC03097,RC03461 ko00000,ko00001,ko01000 Bacteria 1NG8E@1224,2VXVA@28216,COG2104@1,COG2104@2 NA|NA|NA H ThiS family HGDHCNMN_02558 748247.AZKH_3810 7.7e-112 410.2 Rhodocyclales thiG GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 ko:K03149 ko00730,ko01100,map00730,map01100 R10247 RC03096,RC03097,RC03461 ko00000,ko00001,ko01000 Bacteria 1N0N5@1224,2KURE@206389,2VJ8T@28216,COG2022@1,COG2022@2 NA|NA|NA H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S HGDHCNMN_02559 62928.azo2081 2.4e-213 748.0 Rhodocyclales hom GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 1.1.1.3 ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00017,M00018 R01773,R01775 RC00087 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1294,iSB619.SA_RS06610 Bacteria 1MUDC@1224,2KV2B@206389,2VH9T@28216,COG0460@1,COG0460@2 NA|NA|NA E homoserine dehydrogenase HGDHCNMN_02560 76114.ebA4951 1.7e-211 741.9 Rhodocyclales alaA GO:0003674,GO:0003824,GO:0004021,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006090,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009078,GO:0009079,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016769,GO:0019272,GO:0019752,GO:0019842,GO:0030170,GO:0030632,GO:0032787,GO:0033554,GO:0036094,GO:0040007,GO:0042221,GO:0042851,GO:0042852,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0046677,GO:0047635,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0070279,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.2,2.6.1.66 ko:K00814,ko:K14260 ko00220,ko00250,ko00290,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00220,map00250,map00290,map00710,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00171 R00258,R01215 RC00006,RC00008,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 iNJ661.Rv0337c Bacteria 1MW0Z@1224,2KV70@206389,2VH4Z@28216,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase HGDHCNMN_02561 748247.AZKH_2958 1.1e-30 139.4 Rhodocyclales MA20_41450 Bacteria 1N083@1224,2KWY2@206389,2VUF2@28216,COG3737@1,COG3737@2 NA|NA|NA S Protein of unknown function (DUF498/DUF598) HGDHCNMN_02562 640081.Dsui_1997 3.9e-62 244.2 Rhodocyclales bcp GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 ko:K03564 ko00000,ko01000 Bacteria 1RD4R@1224,2KWEZ@206389,2VR4P@28216,COG1225@1,COG1225@2 NA|NA|NA O alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen HGDHCNMN_02563 62928.azo2198 1e-147 530.0 Rhodocyclales phoH ko:K07175 ko00000 Bacteria 1MUX1@1224,2KUNN@206389,2VH4P@28216,COG1875@1,COG1875@2 NA|NA|NA T ATPase related to phosphate starvation-inducible protein PhoH HGDHCNMN_02564 1469613.JT55_14870 9.4e-150 536.6 Rhodovulum ccoN 1.9.3.1 ko:K00404,ko:K15862 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iIT341.HP0144 Bacteria 1MU18@1224,2TR2C@28211,3FCFX@34008,COG3278@1,COG3278@2 NA|NA|NA C Cytochrome C and Quinol oxidase polypeptide I HGDHCNMN_02565 1525715.IX54_16275 3.3e-35 155.2 Paracoccus miaB GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 ko:K06168 R10645,R10646,R10647 RC00003,RC00980,RC03221,RC03222 ko00000,ko01000,ko03016 Bacteria 1MURS@1224,2PW09@265,2TQN6@28211,COG0621@1,COG0621@2 NA|NA|NA J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine HGDHCNMN_02566 1144342.PMI40_03172 0.0 1465.3 Oxalobacteraceae mdtB ko:K03296,ko:K07788 ko02020,map02020 M00648 ko00000,ko00001,ko00002,ko02000 2.A.6.2 Bacteria 1MU48@1224,2VHFI@28216,472J3@75682,COG0841@1,COG0841@2 NA|NA|NA V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family HGDHCNMN_02568 267608.RSp1199 0.0 1289.6 Burkholderiaceae mdtC ko:K03296,ko:K07788,ko:K07789 ko02020,map02020 M00648 ko00000,ko00001,ko00002,ko02000 2.A.6.2 Bacteria 1K044@119060,1MU48@1224,2VHFI@28216,COG0841@1,COG0841@2 NA|NA|NA V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family HGDHCNMN_02569 1286093.C266_16630 4.5e-118 431.8 Burkholderiaceae Bacteria 1K0B9@119060,1MUA8@1224,2VISZ@28216,COG1538@1,COG1538@2 NA|NA|NA M RND efflux system, outer membrane lipoprotein, NodT family HGDHCNMN_02570 748247.AZKH_0176 1.8e-150 538.9 Rhodocyclales ko:K07001 ko00000 Bacteria 1MVHW@1224,2KVBX@206389,2VH3I@28216,COG1752@1,COG1752@2 NA|NA|NA S esterase of the alpha-beta hydrolase superfamily HGDHCNMN_02571 1120999.JONM01000009_gene403 6.3e-81 307.4 Neisseriales ko:K07090 ko00000 Bacteria 1R7DA@1224,2KSXK@206351,2VQHU@28216,COG0730@1,COG0730@2 NA|NA|NA S Sulfite exporter TauE/SafE HGDHCNMN_02572 1219375.CM002139_gene1914 8.7e-96 358.2 Xanthomonadales ko:K03406,ko:K05874 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,1RMH0@1236,1X3KX@135614,COG0840@1,COG0840@2,COG5000@1,COG5000@2 NA|NA|NA NT chemotaxis protein HGDHCNMN_02573 1123255.JHYS01000021_gene1813 1.6e-141 509.2 Comamonadaceae 1.1.3.46 ko:K16422 ko00261,ko01055,ko01130,map00261,map01055,map01130 R06633 RC00240 ko00000,ko00001,ko01000 Bacteria 1MUEZ@1224,2VH77@28216,4ACGQ@80864,COG1304@1,COG1304@2 NA|NA|NA C PFAM FMN-dependent alpha-hydroxy acid dehydrogenase HGDHCNMN_02574 296591.Bpro_3048 8.7e-90 336.7 Comamonadaceae piuC ko:K07336 ko00000,ko01000 Bacteria 1MUI7@1224,2VJHT@28216,4ACJF@80864,COG3128@1,COG3128@2 NA|NA|NA C PKHD-type hydroxylase HGDHCNMN_02575 296591.Bpro_3047 4.3e-258 897.5 Comamonadaceae ko:K16090 ko00000,ko02000 1.B.14.1.11 Bacteria 1MV0X@1224,2VIQR@28216,4AB9T@80864,COG4774@1,COG4774@2 NA|NA|NA P TonB-dependent receptor plug HGDHCNMN_02576 497321.C664_00695 2.2e-232 812.0 Rhodocyclales yncD ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1MUIH@1224,2KVU2@206389,2VKC9@28216,COG4772@1,COG4772@2 NA|NA|NA P COG1629 Outer membrane receptor proteins, mostly Fe transport HGDHCNMN_02577 765911.Thivi_3822 1.2e-166 593.6 Chromatiales Bacteria 1RGCV@1224,1SJP8@1236,1X2T7@135613,COG0715@1,COG0715@2,COG2199@1,COG2199@2 NA|NA|NA PT NMT1/THI5 like HGDHCNMN_02578 279714.FuraDRAFT_2528 1.2e-32 146.4 Neisseriales Bacteria 1RIFX@1224,2ATZM@1,2KRNM@206351,2VSS3@28216,31JJE@2 NA|NA|NA HGDHCNMN_02579 748247.AZKH_3444 2.4e-148 531.9 Rhodocyclales ko:K07234 ko00000 Bacteria 1MUJK@1224,2KV9W@206389,2VJ75@28216,COG3213@1,COG3213@2 NA|NA|NA P NnrS protein HGDHCNMN_02580 748247.AZKH_1836 2.7e-78 298.1 Rhodocyclales clpB GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0010033,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0031249,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035966,GO:0036094,GO:0042221,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 ko:K03694,ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Bacteria 1MURH@1224,2KVIZ@206389,2VHYF@28216,COG0542@1,COG0542@2 NA|NA|NA O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE HGDHCNMN_02581 1123401.JHYQ01000037_gene1631 2.5e-14 85.9 Proteobacteria Bacteria 1N7P3@1224,2E71K@1,331K8@2 NA|NA|NA HGDHCNMN_02582 305700.B447_02116 7.6e-32 143.7 Rhodocyclales Bacteria 1RFWV@1224,2KX4C@206389,2VRDS@28216,COG2885@1,COG2885@2 NA|NA|NA M COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins HGDHCNMN_02583 159087.Daro_1063 3.1e-206 724.5 Rhodocyclales ydcR GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 2.7.7.65 ko:K21023 ko02025,map02025 ko00000,ko00001,ko01000 Bacteria 1MV6F@1224,2KVU5@206389,2VGZY@28216,COG1167@1,COG1167@2 NA|NA|NA K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs HGDHCNMN_02584 159087.Daro_1066 4.8e-172 610.9 Rhodocyclales ccoG Bacteria 1MVFY@1224,2KUM1@206389,2VMRU@28216,COG0348@1,COG0348@2 NA|NA|NA C Cytochrome C oxidase accessory protein HGDHCNMN_02585 305700.B447_14424 2.8e-235 821.2 Rhodocyclales cysI 1.7.1.15,1.7.7.1,1.8.1.2,1.8.7.1 ko:K00362,ko:K00366,ko:K00381,ko:K00392 ko00910,ko00920,ko01100,ko01120,map00910,map00920,map01100,map01120 M00176,M00530,M00531 R00787,R00790,R00858,R00859,R03600 RC00065,RC00176 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVVB@1224,2KY5F@206389,2VIYX@28216,COG0155@1,COG0155@2 NA|NA|NA P Nitrite and sulphite reductase 4Fe-4S domain HGDHCNMN_02586 420662.Mpe_A2214 1.9e-114 419.5 Betaproteobacteria Bacteria 1PDZY@1224,2VM72@28216,COG2200@1,COG2200@2 NA|NA|NA T PFAM EAL domain protein HGDHCNMN_02587 864051.BurJ1DRAFT_3851 1.6e-119 436.0 unclassified Burkholderiales murB 1.3.1.98 ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 R03191,R03192 RC02639 ko00000,ko00001,ko01000,ko01011 Bacteria 1KJJE@119065,1MXDH@1224,2VI7I@28216,COG0812@1,COG0812@2 NA|NA|NA M Cell wall formation HGDHCNMN_02588 497321.C664_17782 4.7e-101 374.4 Rhodocyclales queF GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016651,GO:0016657,GO:0018130,GO:0019438,GO:0033739,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.7.1.13 ko:K06879,ko:K09457 ko00790,ko01100,map00790,map01100 R07605 RC01875 ko00000,ko00001,ko01000,ko03016 iSFV_1184.SFV_2663,iSF_1195.SF2807,iS_1188.S3002 Bacteria 1MW0M@1224,2KUCU@206389,2VINU@28216,COG0780@1,COG0780@2,COG2904@1,COG2904@2 NA|NA|NA F Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) HGDHCNMN_02589 522306.CAP2UW1_2231 2.2e-157 562.0 unclassified Betaproteobacteria mltB 5.1.3.15 ko:K01792,ko:K08305 ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130 R02739 RC00563 ko00000,ko00001,ko01000,ko01011 GH103 Bacteria 1KQ09@119066,1MUZ3@1224,2VMTR@28216,COG2951@1,COG2951@2,COG3409@1,COG3409@2 NA|NA|NA M Cell envelope biogenesis, outer membrane HGDHCNMN_02590 640081.Dsui_1008 1.5e-33 149.4 Rhodocyclales Bacteria 1RER2@1224,2BXMH@1,2KWDZ@206389,2VRAG@28216,32R9I@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2242) HGDHCNMN_02591 1123367.C666_04180 0.0 1123.2 Rhodocyclales polA GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0030312,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 Bacteria 1MU31@1224,2KUC6@206389,2VJ57@28216,COG0258@1,COG0258@2,COG0749@1,COG0749@2 NA|NA|NA L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity HGDHCNMN_02592 305700.B447_07382 1.2e-109 402.9 Rhodocyclales ramA 3.5.1.77,3.5.5.1 ko:K01459,ko:K01501,ko:K11206 ko00380,ko00460,ko00627,ko00643,ko00910,ko01120,map00380,map00460,map00627,map00643,map00910,map01120 R00540,R01887,R03093,R03542,R05591,R07855 RC00315,RC00325,RC00617,RC00959,RC02811 ko00000,ko00001,ko01000 Bacteria 1MUUB@1224,2KV3M@206389,2VIR4@28216,COG0388@1,COG0388@2 NA|NA|NA S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase HGDHCNMN_02593 748247.AZKH_1039 0.0 1122.5 Rhodocyclales yhdP GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0044425,GO:0044459,GO:0044464,GO:0071944 Bacteria 1MXWF@1224,2KUGH@206389,2VH52@28216,COG3164@1,COG3164@2 NA|NA|NA S Protein of unknown function HGDHCNMN_02594 748247.AZKH_1038 0.0 1182.5 Rhodocyclales glnE GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.42,2.7.7.89 ko:K00982 ko00000,ko01000 Bacteria 1MU4I@1224,2KVC4@206389,2VH5B@28216,COG1391@1,COG1391@2 NA|NA|NA H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell HGDHCNMN_02596 1415756.JQMY01000001_gene2375 1.4e-99 369.4 Oceanicola ate GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 ko:K21420 R11547,R11548 RC00064 ko00000,ko01000 Bacteria 1MW62@1224,2PDD3@252301,2TQY8@28211,COG2935@1,COG2935@2 NA|NA|NA O May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate HGDHCNMN_02597 1121479.AUBS01000001_gene3275 6.2e-26 124.0 Alphaproteobacteria yteJ Bacteria 1P9TI@1224,2TRIS@28211,COG1714@1,COG1714@2 NA|NA|NA S membrane protein domain HGDHCNMN_02598 62928.azo2482 2.3e-178 632.5 Rhodocyclales 2.7.13.3 ko:K11527 ko00000,ko01000,ko01001,ko02022 Bacteria 1NRP8@1224,2KVVC@206389,2VGZQ@28216,COG0642@1,COG0642@2,COG2205@2,COG3829@1,COG3829@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_02599 640081.Dsui_1009 2.6e-238 832.4 Betaproteobacteria 2.7.13.3 ko:K20974 ko02020,ko02025,map02020,map02025 M00820 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1NC9X@1224,2WGIN@28216,COG0784@1,COG0784@2,COG2202@1,COG2202@2,COG5002@1,COG5002@2 NA|NA|NA T Histidine kinase HGDHCNMN_02600 640081.Dsui_1010 3.2e-126 458.4 Rhodocyclales ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MWJ1@1224,2KVQI@206389,2VMPY@28216,COG0683@1,COG0683@2 NA|NA|NA E Receptor family ligand binding region HGDHCNMN_02601 1123367.C666_11330 4.2e-53 214.2 Proteobacteria ko:K07216 ko00000 Bacteria 1MZJ3@1224,COG2703@1,COG2703@2 NA|NA|NA P PFAM Hemerythrin HHE cation binding domain protein HGDHCNMN_02602 76114.ebA2917 3.4e-161 574.7 Rhodocyclales yajR_1 Bacteria 1MXPM@1224,2KVE0@206389,2VHXT@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Sugar (and other) transporter HGDHCNMN_02604 62928.azo2854 3.5e-112 411.4 Rhodocyclales ko:K09930 ko00000 Bacteria 1MURE@1224,2KUJ3@206389,2VKP0@28216,COG3220@1,COG3220@2 NA|NA|NA S Protein of unknown function (DUF692) HGDHCNMN_02605 62928.azo2855 1.1e-63 250.0 Rhodocyclales ko:K09929 ko00000 Bacteria 1R8C9@1224,2KWH5@206389,2VPVN@28216,COG3219@1,COG3219@2 NA|NA|NA S Putative DNA-binding domain HGDHCNMN_02606 62928.azo2857 1.8e-72 278.9 Rhodocyclales sigX ko:K03088 ko00000,ko03021 Bacteria 1RHKM@1224,2KWGQ@206389,2VRMP@28216,COG1595@1,COG1595@2 NA|NA|NA K Belongs to the sigma-70 factor family. ECF subfamily HGDHCNMN_02607 62928.azo2858 6.4e-11 72.8 Rhodocyclales Bacteria 1NH4R@1224,2KXMX@206389,2VXXB@28216,COG5660@1,COG5660@2 NA|NA|NA S Putative zinc-finger HGDHCNMN_02608 305700.B447_02611 3.5e-154 552.0 Bacteria Bacteria COG5001@1,COG5001@2 NA|NA|NA T cyclic-guanylate-specific phosphodiesterase activity HGDHCNMN_02610 1348657.M622_00385 1.8e-32 144.8 Rhodocyclales infA GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 ko:K02518 ko00000,ko03012 Bacteria 1MZFU@1224,2KWYD@206389,2VU4I@28216,COG0361@1,COG0361@2 NA|NA|NA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex HGDHCNMN_02611 1121035.AUCH01000012_gene2951 2.6e-73 281.6 Rhodocyclales yieF GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006805,GO:0008150,GO:0008152,GO:0009410,GO:0009987,GO:0010181,GO:0016491,GO:0016645,GO:0016646,GO:0032553,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0052873,GO:0055114,GO:0070887,GO:0071466,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K19784 ko00000 Bacteria 1RAFI@1224,2KWSD@206389,2VKQS@28216,COG0431@1,COG0431@2 NA|NA|NA S Flavodoxin-like fold HGDHCNMN_02612 1454004.AW11_02842 8.5e-98 363.6 Betaproteobacteria Bacteria 1RF5X@1224,2VRU2@28216,COG1639@1,COG1639@2 NA|NA|NA T PFAM Metal-dependent hydrolase HDOD HGDHCNMN_02613 1454004.AW11_02843 4.9e-142 511.1 Betaproteobacteria 2.7.7.65 ko:K21023 ko02025,map02025 ko00000,ko00001,ko01000 Bacteria 1NSWT@1224,2VZMP@28216,COG5001@1,COG5001@2 NA|NA|NA T Putative diguanylate phosphodiesterase HGDHCNMN_02614 522306.CAP2UW1_1031 2.3e-94 352.4 Betaproteobacteria Bacteria 1MX23@1224,2VNAB@28216,COG2207@1,COG2207@2 NA|NA|NA K PFAM helix-turn-helix- domain containing protein, AraC type HGDHCNMN_02615 1454004.AW11_02652 9.6e-222 776.2 unclassified Betaproteobacteria phrB GO:0000166,GO:0000719,GO:0003674,GO:0003824,GO:0003913,GO:0003914,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006290,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0033554,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0071949,GO:0090304,GO:0097159,GO:0140097,GO:1901265,GO:1901360,GO:1901363 ko:K06876 ko00000 Bacteria 1KQGU@119066,1MUHX@1224,2VHTR@28216,COG3046@1,COG3046@2 NA|NA|NA S Deoxyribodipyrimidine photo-lyase-related protein HGDHCNMN_02616 497321.C664_01990 3.9e-152 544.7 Rhodocyclales cry GO:0003674,GO:0003824,GO:0003904,GO:0003913,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 4.1.99.3 ko:K01669 ko00000,ko01000,ko03400 Bacteria 1MWRT@1224,2KZSJ@206389,2VJCX@28216,COG0415@1,COG0415@2 NA|NA|NA L cryptochrome, DASH family HGDHCNMN_02617 1449351.RISW2_02205 1.3e-14 84.7 Roseivivax Bacteria 1NGIS@1224,2UJAQ@28211,4KN3S@93682,COG4338@1,COG4338@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2256) HGDHCNMN_02618 497321.C664_02000 1.2e-216 759.2 Rhodocyclales cry2 4.1.99.3 ko:K01669 ko00000,ko01000,ko03400 Bacteria 1MX6J@1224,2KXQ5@206389,2VK7R@28216,COG0415@1,COG0415@2 NA|NA|NA L Deoxyribodipyrimidine photo-lyase HGDHCNMN_02619 1454004.AW11_02651 1.9e-117 429.1 unclassified Betaproteobacteria GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050664,GO:0051287,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 ko:K06955 ko00000 Bacteria 1KQC6@119066,1R5C0@1224,2VMD5@28216,COG3380@1,COG3380@2 NA|NA|NA S Flavin containing amine oxidoreductase HGDHCNMN_02620 522306.CAP2UW1_3146 9.1e-93 346.7 Betaproteobacteria Bacteria 1RDI1@1224,2VN3W@28216,COG1028@1,COG1028@2 NA|NA|NA IQ Short-chain dehydrogenase reductase (SDR) HGDHCNMN_02623 497321.C664_03902 3.5e-125 454.9 Rhodocyclales yeeE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K07112 ko00000 Bacteria 1MXSE@1224,2KVG7@206389,2VKGG@28216,COG2391@1,COG2391@2 NA|NA|NA S Sulphur transport HGDHCNMN_02624 62928.azo0413 2.5e-97 361.7 Rhodocyclales queC 6.3.4.20 ko:K06920 ko00790,ko01100,map00790,map01100 R09978 RC00959 ko00000,ko00001,ko01000,ko03016 iAF987.Gmet_3075 Bacteria 1MU5V@1224,2KVAA@206389,2VHY3@28216,COG0603@1,COG0603@2 NA|NA|NA F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) HGDHCNMN_02625 748247.AZKH_4302 6.8e-87 327.0 Rhodocyclales queE 1.97.1.4,4.3.99.3 ko:K04068,ko:K10026 ko00790,ko01100,map00790,map01100 R04710,R10002 RC02989 ko00000,ko00001,ko01000,ko03016 iAF987.Gmet_1658 Bacteria 1MUJ2@1224,2KUF1@206389,2VGZ7@28216,COG0602@1,COG0602@2 NA|NA|NA H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds HGDHCNMN_02626 1000565.METUNv1_03398 4.2e-53 214.9 Rhodocyclales cpoB GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043933,GO:0044085,GO:0044464,GO:0051259,GO:0051260,GO:0051301,GO:0065003,GO:0071840 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 Bacteria 1MUSV@1224,2KW31@206389,2VIPC@28216,COG1729@1,COG1729@2 NA|NA|NA D Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division HGDHCNMN_02627 1123367.C666_05120 4.9e-51 207.6 Rhodocyclales pal GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032153,GO:0044425,GO:0044462,GO:0044464,GO:0051301,GO:0071944,GO:0098552 ko:K03640 ko00000,ko02000 2.C.1.2 Bacteria 1MZTV@1224,2KWKV@206389,2VSP6@28216,COG2885@1,COG2885@2 NA|NA|NA M Belongs to the ompA family HGDHCNMN_02628 497321.C664_03927 2.8e-81 309.3 Rhodocyclales tolB GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 ko:K03641 ko00000,ko02000 2.C.1.2 Bacteria 1MV09@1224,2KUUQ@206389,2VH9R@28216,COG0823@1,COG0823@2 NA|NA|NA U Involved in the tonB-independent uptake of proteins HGDHCNMN_02629 1454004.AW11_02786 1.2e-16 93.2 unclassified Betaproteobacteria tolA ko:K03646,ko:K03832 ko00000,ko02000 2.C.1.1,2.C.1.2 Bacteria 1KQXX@119066,1MZ9F@1224,2VKUS@28216,COG0810@1,COG0810@2 NA|NA|NA M TonB C terminal HGDHCNMN_02630 1304883.KI912532_gene976 9.9e-26 124.4 Rhodocyclales tolA ko:K03646,ko:K03832 ko00000,ko02000 2.C.1.1,2.C.1.2 Bacteria 1MZ9F@1224,2KVZ9@206389,2VKUS@28216,COG0810@1,COG0810@2 NA|NA|NA M TonB C terminal HGDHCNMN_02631 76114.ebA2645 2.3e-37 161.8 Rhodocyclales tolR GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032153,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 ko:K03560 ko00000,ko02000 1.A.30.2.2 Bacteria 1RGWR@1224,2KXEC@206389,2VT20@28216,COG0848@1,COG0848@2 NA|NA|NA U Biopolymer transport protein HGDHCNMN_02632 748247.AZKH_4296 8.6e-98 363.2 Rhodocyclales tolQ ko:K03562 ko01120,map01120 ko00000,ko02000 1.A.30.2.2 Bacteria 1NCWW@1224,2KV8T@206389,2VJPW@28216,COG0811@1,COG0811@2 NA|NA|NA U MotA TolQ ExbB proton channel HGDHCNMN_02633 62928.azo0421 1.1e-40 172.9 Rhodocyclales ybgC GO:0003674,GO:0003824,GO:0016787,GO:0016788,GO:0016790 3.1.2.23 ko:K01075,ko:K07107 ko00130,ko00362,ko01100,ko01110,ko01120,map00130,map00362,map01100,map01110,map01120 R01301 RC00004,RC00174 ko00000,ko00001,ko01000 iECP_1309.ECP_0747,iSDY_1059.SDY_0684 Bacteria 1MZH6@1224,2KWWA@206389,2VUEV@28216,COG0824@1,COG0824@2 NA|NA|NA S Tol-pal system-associated acyl-CoA thioesterase HGDHCNMN_02634 859657.RPSI07_3332 3.4e-47 194.5 Burkholderiaceae dksA ko:K06204 ko02026,map02026 ko00000,ko00001,ko03000,ko03009,ko03021 Bacteria 1K758@119060,1RD08@1224,2VQR5@28216,COG1734@1,COG1734@2 NA|NA|NA T Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters HGDHCNMN_02635 522306.CAP2UW1_3718 1.4e-113 416.4 unclassified Betaproteobacteria yjiA_2 Bacteria 1KPXX@119066,1MVZV@1224,2VIHH@28216,COG0523@1,COG0523@2 NA|NA|NA S cobalamin synthesis CobW domain protein HGDHCNMN_02637 1198452.Jab_2c05520 7.8e-117 427.6 Betaproteobacteria Bacteria 1MY3M@1224,2VIIP@28216,COG3746@1,COG3746@2 NA|NA|NA P phosphate-selective porin O and P HGDHCNMN_02638 640081.Dsui_0585 1.5e-105 389.4 Rhodocyclales znuA ko:K02077,ko:K09815,ko:K09818 ko02010,map02010 M00242,M00243,M00244 ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 Bacteria 1MVW9@1224,2KVG9@206389,2VHKN@28216,COG0803@1,COG0803@2 NA|NA|NA P Belongs to the bacterial solute-binding protein 9 family HGDHCNMN_02639 640081.Dsui_0584 3.4e-55 221.5 Rhodocyclales tlrC ko:K06158,ko:K18230 ko02010,map02010 ko00000,ko00001,ko01504,ko02000,ko03012 3.A.1.120 Bacteria 1RJA9@1224,2KX6H@206389,2VXIF@28216,COG0488@1,COG0488@2 NA|NA|NA S ATPases associated with a variety of cellular activities HGDHCNMN_02640 640081.Dsui_0583 7.3e-64 250.8 Rhodocyclales znuB ko:K02075,ko:K09816 ko02010,map02010 M00242,M00244 ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 Bacteria 1RGT1@1224,2KX7B@206389,2VXHE@28216,COG1108@1,COG1108@2 NA|NA|NA P ABC 3 transport family HGDHCNMN_02641 62928.azo0422 4.3e-76 292.0 Rhodocyclales Bacteria 1R08G@1224,2KVYW@206389,2VIGK@28216,COG1366@1,COG1366@2 NA|NA|NA T Belongs to the anti-sigma-factor antagonist family HGDHCNMN_02642 1123487.KB892834_gene3056 1.9e-84 318.5 Rhodocyclales hslV GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 3.4.25.2 ko:K01419 ko00000,ko01000,ko01002 Bacteria 1MVF2@1224,2KUW6@206389,2VIFV@28216,COG5405@1,COG5405@2 NA|NA|NA O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery HGDHCNMN_02643 497321.C664_03962 2.2e-201 708.4 Rhodocyclales hslU GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 ko:K03667 ko00000,ko03110 Bacteria 1MVK9@1224,2KVM8@206389,2VHG3@28216,COG1220@1,COG1220@2 NA|NA|NA O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis HGDHCNMN_02644 76114.ebA2636 1.3e-114 419.5 Rhodocyclales VV2066 ko:K07088 ko00000 Bacteria 1P2SH@1224,2KU7D@206389,2VNH9@28216,COG0679@1,COG0679@2 NA|NA|NA S Membrane transport protein HGDHCNMN_02645 62928.azo0427 8e-43 179.9 Rhodocyclales hslR GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009987,GO:0016070,GO:0033554,GO:0034605,GO:0034641,GO:0043021,GO:0043023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 ko:K04762 ko00000,ko03110 Bacteria 1MZR6@1224,2KWX7@206389,2VTY8@28216,COG1188@1,COG1188@2 NA|NA|NA J COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) HGDHCNMN_02646 1123367.C666_07560 1e-64 253.1 Rhodocyclales regA ko:K15012 ko02020,map02020 M00523 ko00000,ko00001,ko00002,ko02022 Bacteria 1RD7J@1224,2KWU2@206389,2VN1I@28216,COG4567@1,COG4567@2 NA|NA|NA T COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain HGDHCNMN_02647 305700.B447_07719 4.4e-84 318.5 Rhodocyclales Bacteria 1QV2U@1224,2KW5J@206389,2WGTB@28216,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_02648 748247.AZKH_0544 9.1e-27 125.6 Rhodocyclales scoF ko:K03704 ko00000,ko03000 Bacteria 1N6Q5@1224,2KZUI@206389,2VV0X@28216,COG1278@1,COG1278@2 NA|NA|NA K Cold shock protein domain HGDHCNMN_02649 1121035.AUCH01000022_gene3212 2.8e-32 144.4 Rhodocyclales Bacteria 1MZF3@1224,2KX1V@206389,2VTZZ@28216,COG3162@1,COG3162@2 NA|NA|NA S Protein of unknown function, DUF485 HGDHCNMN_02650 85643.Tmz1t_0556 1.5e-255 888.6 Rhodocyclales actP ko:K14393 ko00000,ko02000 2.A.21.7 Bacteria 1MVJ8@1224,2KUSH@206389,2VHP4@28216,COG4147@1,COG4147@2 NA|NA|NA S Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family HGDHCNMN_02651 1430440.MGMSRv2_1814 4.4e-228 797.3 Rhodospirillales actP ko:K14393 ko00000,ko02000 2.A.21.7 Bacteria 1MVJ8@1224,2JVP5@204441,2TTA4@28211,COG4147@1,COG4147@2 NA|NA|NA S Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family HGDHCNMN_02652 1244869.H261_01342 3.4e-25 120.9 Rhodospirillales ko:K14393 ko00000,ko02000 2.A.21.7 Bacteria 1MZF3@1224,2JX8A@204441,2UN1J@28211,COG3162@1,COG3162@2 NA|NA|NA S Protein of unknown function, DUF485 HGDHCNMN_02653 1304883.KI912532_gene562 1.9e-252 878.2 Rhodocyclales etfD 1.5.5.1 ko:K00311 ko00000,ko01000 Bacteria 1MVU6@1224,2KUE9@206389,2VH37@28216,COG0644@1,COG0644@2,COG2440@1,COG2440@2 NA|NA|NA C Electron transfer flavoprotein-ubiquinone oxidoreductase HGDHCNMN_02654 159087.Daro_0227 2.5e-39 168.7 Rhodocyclales acd ko:K20035 ko00920,map00920 R11130 RC03363 ko00000,ko00001,ko01000 Bacteria 1MU20@1224,2KUFZ@206389,2VGZD@28216,COG1960@1,COG1960@2 NA|NA|NA C COG1960 Acyl-CoA dehydrogenases HGDHCNMN_02655 85643.Tmz1t_1520 9.9e-119 433.0 Rhodocyclales ko:K01996 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MVVC@1224,2KVMK@206389,2VJNG@28216,COG0410@1,COG0410@2 NA|NA|NA E ATP-binding cassette (ABC) transporters are multidomain membrane proteins, responsible for the controlled efflux and influx of substances (allocrites) across cellular membranes. ATP-binding protein is for coupling the energy of ATP hydrolysis to conformational changes in the transmembrane domains HGDHCNMN_02656 62928.azo0313 3.7e-289 1000.3 Rhodocyclales MA20_18645 ko:K01995,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MUTY@1224,2KUY7@206389,2VH2P@28216,COG0411@1,COG0411@2,COG4177@1,COG4177@2 NA|NA|NA P Belongs to the binding-protein-dependent transport system permease family HGDHCNMN_02657 62928.azo0312 3.3e-149 534.6 Rhodocyclales ko:K01997 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MXMC@1224,2KUY3@206389,2VJ1Y@28216,COG0559@1,COG0559@2 NA|NA|NA U Belongs to the binding-protein-dependent transport system permease family HGDHCNMN_02658 1149133.ppKF707_5155 2.2e-162 578.6 Pseudomonas aeruginosa group ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MXR4@1224,1RYM6@1236,1YHYQ@136841,COG0683@1,COG0683@2 NA|NA|NA E Receptor family ligand binding region HGDHCNMN_02659 1169143.KB911035_gene2258 2.2e-26 125.2 Burkholderiaceae dmpI 5.3.2.6 ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 M00569 R03966,R05389 RC01040,RC01355 ko00000,ko00001,ko00002,ko01000 Bacteria 1K8YQ@119060,1NG98@1224,2WFVK@28216,COG1942@1,COG1942@2 NA|NA|NA G Tautomerase enzyme HGDHCNMN_02660 1437824.BN940_15411 1.1e-60 239.6 Alcaligenaceae hpaC ko:K09024 ko00240,ko01100,map00240,map01100 R09936 RC02732 ko00000,ko00001,ko01000 Bacteria 1NESS@1224,2VRUZ@28216,3T7U7@506,COG1853@1,COG1853@2 NA|NA|NA S Flavin reductase like domain HGDHCNMN_02661 1488328.JMCL01000109_gene4133 4.7e-126 457.6 Gammaproteobacteria ko:K03863 ko00627,ko01120,map00627,map01120 R05274 RC00392,RC01533 ko00000,ko00001 Bacteria 1MU6E@1224,1RNA4@1236,COG1018@1,COG1018@2 NA|NA|NA C Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 HGDHCNMN_02662 1488328.JMCL01000109_gene4134 6.8e-88 330.5 Gammaproteobacteria Bacteria 1R4D2@1224,1RQZA@1236,COG1028@1,COG1028@2 NA|NA|NA IQ reductase HGDHCNMN_02663 1001585.MDS_4195 6.3e-55 220.3 Pseudomonas aeruginosa group hcaA2 Bacteria 1RH37@1224,1S6S5@1236,1YGPB@136841,COG5517@1,COG5517@2 NA|NA|NA Q Ring hydroxylating beta subunit HGDHCNMN_02664 1453503.AU05_09165 6.6e-208 729.9 Pseudomonas aeruginosa group antA Bacteria 1N6MJ@1224,1RSEF@1236,1YFCF@136841,COG4638@1,COG4638@2 NA|NA|NA P Ring hydroxylating alpha subunit (catalytic domain) HGDHCNMN_02665 1245471.PCA10_14750 1.1e-63 249.6 Pseudomonas aeruginosa group Bacteria 1RHGP@1224,1S6BD@1236,1YGWT@136841,2ASE4@1,31HTP@2 NA|NA|NA S SnoaL-like domain HGDHCNMN_02666 1437824.BN940_15421 4.5e-53 213.8 Betaproteobacteria Bacteria 1N1H9@1224,2CFH0@1,2VUDJ@28216,32S2Y@2 NA|NA|NA HGDHCNMN_02667 1437824.BN940_15426 9.1e-156 556.6 Betaproteobacteria 1.14.13.235 ko:K22027 ko00000,ko01000 Bacteria 1MXMQ@1224,2VM0B@28216,COG1960@1,COG1960@2 NA|NA|NA I acyl-CoA dehydrogenase HGDHCNMN_02668 1123020.AUIE01000015_gene795 2e-112 412.5 Pseudomonas aeruginosa group gatA 3.5.1.4,6.3.5.6,6.3.5.7 ko:K01426,ko:K02433 ko00330,ko00360,ko00380,ko00627,ko00643,ko00970,ko01100,ko01120,map00330,map00360,map00380,map00627,map00643,map00970,map01100,map01120 R02540,R03096,R03180,R03905,R03909,R04212,R05551,R05590 RC00010,RC00100,RC00950,RC01025 ko00000,ko00001,ko01000,ko03029 Bacteria 1MU51@1224,1RR6N@1236,1YFNP@136841,COG0154@1,COG0154@2 NA|NA|NA J Amidase HGDHCNMN_02669 264198.Reut_B3490 5.4e-57 227.3 Burkholderiaceae fldA Bacteria 1K1WS@119060,1RAP5@1224,2VQVY@28216,COG0655@1,COG0655@2 NA|NA|NA S NADPH-dependent FMN reductase HGDHCNMN_02670 1304883.KI912532_gene3059 9e-12 76.3 Proteobacteria Bacteria 1NN9Y@1224,2EG5Z@1,339XV@2 NA|NA|NA HGDHCNMN_02672 1304883.KI912532_gene3058 1.1e-91 343.2 Rhodocyclales Bacteria 1RBB8@1224,28PES@1,2KWA0@206389,2VQV5@28216,2ZC68@2 NA|NA|NA HGDHCNMN_02673 1304883.KI912532_gene3057 0.0 1419.4 Rhodocyclales dmsA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009390,GO:0009897,GO:0009986,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0032991,GO:0033797,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071944,GO:0098552,GO:0098567,GO:1902494 1.8.5.3,1.97.1.9 ko:K07306,ko:K07309,ko:K07310 ko00450,ko00920,map00450,map00920 R07229,R09501 RC02420,RC02555 ko00000,ko00001,ko01000,ko02000 5.A.3.3 iE2348C_1286.E2348C_1672,iECSE_1348.ECSE_0952,iNRG857_1313.NRG857_07945,iSFV_1184.SFV_1557,iZ_1308.Z1240 Bacteria 1NR6J@1224,2KUV3@206389,2VHHZ@28216,COG0243@1,COG0243@2 NA|NA|NA C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family HGDHCNMN_02674 85643.Tmz1t_0361 1.5e-102 379.0 Rhodocyclales dmsB GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009389,GO:0009390,GO:0009897,GO:0009986,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016667,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071944,GO:0098552,GO:0098567,GO:1902494 ko:K02572,ko:K03616,ko:K07307,ko:K07311 ko00920,map00920 R09501 RC02555 ko00000,ko00001,ko02000 5.A.3.3 iPC815.YPO3324 Bacteria 1MU5T@1224,2KVYC@206389,2VPAD@28216,COG0437@1,COG0437@2 NA|NA|NA C 4Fe-4S binding domain HGDHCNMN_02675 870187.Thini_4226 3.4e-32 145.2 Proteobacteria 1.8.5.5 ko:K03533,ko:K08352,ko:K16950 ko00920,ko01120,ko02020,map00920,map01120,map02020 R00858,R10146,R10149 RC00065,RC02823 ko00000,ko00001,ko01000,ko02000 5.A.3.4,5.A.3.5 Bacteria 1N4MX@1224,COG3381@1,COG3381@2 NA|NA|NA S component of anaerobic HGDHCNMN_02676 1121033.AUCF01000029_gene295 8.4e-30 137.9 Bacteria Bacteria COG1145@1,COG1145@2,COG2768@1,COG2768@2 NA|NA|NA C 4fe-4S ferredoxin, iron-sulfur binding domain protein HGDHCNMN_02677 870187.Thini_4231 4.3e-107 395.6 Gammaproteobacteria 2.7.13.3 ko:K10916 ko02020,ko02024,ko05111,map02020,map02024,map05111 M00513 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1QXD8@1224,1T4M2@1236,COG4191@1,COG4191@2 NA|NA|NA T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HGDHCNMN_02678 1123399.AQVE01000019_gene1571 6.8e-118 431.0 Thiotrichales ko:K07714,ko:K10941 ko02020,ko02025,ko05111,map02020,map02025,map05111 M00500 ko00000,ko00001,ko00002,ko02022,ko03000 Bacteria 1MU0N@1224,1RMCK@1236,460AR@72273,COG2204@1,COG2204@2 NA|NA|NA T response regulator receiver HGDHCNMN_02679 1123393.KB891316_gene1835 0.0 1903.3 Hydrogenophilales nifJ GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016491,GO:0016625,GO:0016903,GO:0043873,GO:0050896,GO:0055114 1.2.7.1 ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00173,M00307 R01196,R10866 RC00004,RC02742 br01601,ko00000,ko00001,ko00002,ko01000 iJN678.nifJ,iLF82_1304.LF82_2789,iNRG857_1313.NRG857_06920 Bacteria 1KRXT@119069,1MVM0@1224,2VN9C@28216,COG0674@1,COG0674@2,COG1013@1,COG1013@2,COG1014@1,COG1014@2,COG1145@1,COG1145@2 NA|NA|NA C Pyruvate:ferredoxin oxidoreductase core domain II HGDHCNMN_02681 748247.AZKH_3816 8.1e-84 317.0 Rhodocyclales acoR ko:K21405 ko00000,ko03000 Bacteria 1NRG5@1224,2KXW1@206389,2VICI@28216,COG3284@1,COG3284@2 NA|NA|NA K GAF domain HGDHCNMN_02682 62928.azo3864 2.7e-35 155.6 Rhodocyclales Bacteria 1N226@1224,2KYYU@206389,2VUDD@28216,COG2010@1,COG2010@2 NA|NA|NA C Cytochrome C oxidase, cbb3-type, subunit III HGDHCNMN_02683 62928.azo3865 4.5e-273 946.8 Rhodocyclales Bacteria 1MUQX@1224,2KY65@206389,2VM62@28216,COG4993@1,COG4993@2 NA|NA|NA G PQQ-like domain HGDHCNMN_02684 1000565.METUNv1_01984 1.3e-122 446.4 Betaproteobacteria Bacteria 1N1KC@1224,2VKGE@28216,COG3203@1,COG3203@2 NA|NA|NA M PFAM porin Gram-negative type HGDHCNMN_02685 395495.Lcho_0995 2.4e-81 308.1 unclassified Burkholderiales MA20_05990 ko:K07045 ko00000 Bacteria 1KK4P@119065,1MUUR@1224,2VJXA@28216,COG2159@1,COG2159@2 NA|NA|NA S Amidohydrolase HGDHCNMN_02686 497321.C664_00765 6.8e-78 297.4 Rhodocyclales ppiC 5.2.1.8 ko:K01802,ko:K03769,ko:K07533 ko00000,ko01000,ko03110 Bacteria 1MZDK@1224,2KVE7@206389,2VJZP@28216,COG0760@1,COG0760@2 NA|NA|NA M peptidylprolyl isomerase HGDHCNMN_02687 76114.ebD120 4.3e-26 123.6 Rhodocyclales bolA ko:K05527 ko00000,ko03000 Bacteria 1MZG5@1224,2KXDF@206389,2VVNP@28216,COG0271@1,COG0271@2 NA|NA|NA T Belongs to the BolA IbaG family HGDHCNMN_02688 1304883.KI912532_gene2018 2e-35 154.8 Rhodocyclales yciI GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K05527,ko:K09780 ko00000,ko03000 Bacteria 1MZ9Z@1224,2KWK7@206389,2VUM7@28216,COG2350@1,COG2350@2 NA|NA|NA S YCII-related domain HGDHCNMN_02689 76114.ebA6501 4.5e-57 227.6 Rhodocyclales ispZ GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K06190 ko00000 Bacteria 1NWIZ@1224,2KVFB@206389,2VRHB@28216,COG2917@1,COG2917@2 NA|NA|NA D probably involved in intracellular septation HGDHCNMN_02690 1000565.METUNv1_01172 2.6e-44 184.9 Rhodocyclales yjbI ko:K06886 ko00000 Bacteria 1RH21@1224,2KWMV@206389,2VSUJ@28216,COG2346@1,COG2346@2 NA|NA|NA S Bacterial-like globin HGDHCNMN_02691 497321.C664_00740 1.1e-82 313.2 Rhodocyclales blh Bacteria 1MURA@1224,2KXA5@206389,2VJYK@28216,COG0491@1,COG0491@2 NA|NA|NA P Metallo-beta-lactamase superfamily HGDHCNMN_02692 85643.Tmz1t_2260 8.4e-129 467.2 Rhodocyclales Bacteria 1MUAK@1224,2KUEB@206389,2VJ6W@28216,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_02693 1123367.C666_14465 4.6e-105 387.5 Rhodocyclales Bacteria 1MY3D@1224,2KUNC@206389,2VI6B@28216,COG0745@1,COG0745@2 NA|NA|NA K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain HGDHCNMN_02695 76114.ebA6494 5.6e-44 184.5 Rhodocyclales yeaZ GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0071944,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 ko:K01409,ko:K14742 R10648 RC00070,RC00416 ko00000,ko01000,ko03016 Bacteria 1MXPH@1224,2KWUU@206389,2VQR7@28216,COG1214@1,COG1214@2 NA|NA|NA O Peptidase M22 glycoprotease HGDHCNMN_02696 748247.AZKH_2733 5.3e-43 180.6 Rhodocyclales rimI GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008999,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017189,GO:0018193,GO:0018194,GO:0019538,GO:0031365,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.3.1.128,2.3.1.234 ko:K01409,ko:K03789,ko:K14742 R10648 RC00070,RC00416 ko00000,ko01000,ko03009,ko03016 Bacteria 1RIE6@1224,2KWTR@206389,2VUIW@28216,COG0454@1,COG0456@2 NA|NA|NA K This enzyme acetylates the N-terminal alanine of ribosomal protein S18 HGDHCNMN_02697 1123487.KB892841_gene4239 1.1e-86 326.6 Rhodocyclales dpo 3.2.2.27 ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MWX1@1224,2KUYX@206389,2VPZQ@28216,COG1573@1,COG1573@2 NA|NA|NA L uracil-DNA glycosylase HGDHCNMN_02698 159087.Daro_1190 1.8e-73 282.3 Rhodocyclales lemA ko:K03744 ko00000 Bacteria 1MVH0@1224,2KVCY@206389,2VHT5@28216,COG1704@1,COG1704@2 NA|NA|NA S LemA family HGDHCNMN_02699 1236959.BAMT01000005_gene93 1.2e-51 210.3 Nitrosomonadales ko:K06872 ko00000 Bacteria 1PB41@1224,2KKKF@206350,2VMNV@28216,COG1512@1,COG1512@2 NA|NA|NA S TPM domain HGDHCNMN_02700 522306.CAP2UW1_2655 1.2e-45 189.5 unclassified Betaproteobacteria Z012_08985 ko:K08988 ko00000 Bacteria 1KQX4@119066,1R61N@1224,2VRJE@28216,COG3762@1,COG3762@2 NA|NA|NA S TPM domain HGDHCNMN_02701 62928.azo1587 1.8e-131 477.2 Betaproteobacteria Bacteria 1NSQ1@1224,2VJX9@28216,COG4251@1,COG4251@2 NA|NA|NA T histidine kinase A domain protein HGDHCNMN_02702 305700.B447_10418 3.1e-59 234.6 Rhodocyclales tadA GO:0002097,GO:0002100,GO:0003674,GO:0003824,GO:0004000,GO:0005488,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008251,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0052717,GO:0071704,GO:0090304,GO:1901360 3.4.17.13,3.5.4.1,3.5.4.3,3.5.4.33,3.8.1.5 ko:K01297,ko:K01485,ko:K01487,ko:K01563,ko:K11991 ko00230,ko00240,ko00330,ko00361,ko00625,ko01100,ko01120,map00230,map00240,map00330,map00361,map00625,map01100,map01120 R00974,R01411,R01676,R02922,R05284,R05367,R05368,R05369,R05370,R07669,R07670,R10223 RC00074,RC00204,RC00477,RC00514,RC00809,RC01317,RC01340,RC01341,RC02013 ko00000,ko00001,ko01000,ko01002,ko01011,ko03016 Bacteria 1RGU0@1224,2KW90@206389,2VR60@28216,COG0590@1,COG0590@2 NA|NA|NA FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) HGDHCNMN_02703 497321.C664_01795 6.3e-63 246.9 Rhodocyclales Bacteria 1RHBG@1224,2KWDI@206389,2VQT7@28216,COG1376@1,COG1376@2 NA|NA|NA S ErfK YbiS YcfS YnhG family protein HGDHCNMN_02704 864073.HFRIS_018888 4.3e-39 167.5 Oxalobacteraceae yitI ko:K02348,ko:K07000 ko00000 Bacteria 1MZ86@1224,2VMR6@28216,474GP@75682,COG2153@1,COG2153@2 NA|NA|NA S Acetyltransferase (GNAT) domain HGDHCNMN_02705 748247.AZKH_2767 3.9e-50 204.9 Rhodocyclales 3.1.1.45 ko:K01061,ko:K07100 ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130 R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222 RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686 ko00000,ko00001,ko01000 Bacteria 1QVEZ@1224,2KXMU@206389,2VWXD@28216,COG0412@1,COG0412@2 NA|NA|NA Q Dienelactone hydrolase HGDHCNMN_02706 1304883.KI912532_gene2328 7.6e-157 560.1 Rhodocyclales pflA 1.97.1.4 ko:K04069 R04710 ko00000,ko01000 Bacteria 1NQC1@1224,2KU6E@206389,2VINV@28216,COG1180@1,COG1180@2 NA|NA|NA C Radical SAM superfamily HGDHCNMN_02707 497321.C664_00890 5.4e-53 214.2 Rhodocyclales ko:K06990,ko:K09141 ko00000,ko04812 Bacteria 1RJP4@1224,2KWM9@206389,2VRE4@28216,COG2078@1,COG2078@2 NA|NA|NA S AMMECR1 HGDHCNMN_02708 85643.Tmz1t_2215 7e-52 210.3 Rhodocyclales ko:K06990 ko00000,ko04812 Bacteria 1MXK5@1224,2KVTT@206389,2VKXP@28216,COG1355@1,COG1355@2 NA|NA|NA S Belongs to the MEMO1 family HGDHCNMN_02711 305700.B447_12629 3.4e-71 274.6 Rhodocyclales pgsA 2.7.8.41,2.7.8.5 ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 R01801,R02030 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 Bacteria 1RCZ7@1224,2KW4F@206389,2VQI2@28216,COG0558@1,COG0558@2 NA|NA|NA I Belongs to the CDP-alcohol phosphatidyltransferase class-I family HGDHCNMN_02712 85643.Tmz1t_2306 1.6e-244 852.0 Rhodocyclales uvrC GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009380,GO:0009381,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016787,GO:0016788,GO:0030312,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1902494,GO:1905347,GO:1905348,GO:1990391 ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1MV38@1224,2KURJ@206389,2VIM4@28216,COG0322@1,COG0322@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision HGDHCNMN_02713 748247.AZKH_2830 1.1e-120 439.9 Rhodocyclales nagZ GO:0000270,GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009273,GO:0009987,GO:0015929,GO:0016787,GO:0016798,GO:0030203,GO:0042546,GO:0043170,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901564 2.7.8.7,3.2.1.21,3.2.1.52 ko:K00997,ko:K01207,ko:K05349 ko00460,ko00500,ko00520,ko00531,ko00770,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00770,map00940,map01100,map01110,map01501 M00628 R00022,R00026,R01625,R02558,R02887,R02985,R03527,R04949,R04998,R05963,R07809,R07810,R10035,R10039,R10040,R10831 RC00002,RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko00002,ko01000 GH3 iSFV_1184.SFV_1127,iUMN146_1321.UM146_11790 Bacteria 1MVAJ@1224,2KV0Y@206389,2VHAR@28216,COG1472@1,COG1472@2 NA|NA|NA G Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides HGDHCNMN_02714 76114.ebB196 4.5e-40 170.6 Rhodocyclales acpS GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008897,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0018070,GO:0018193,GO:0018209,GO:0018215,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 2.7.8.7,3.2.1.52 ko:K00997,ko:K01207 ko00520,ko00531,ko00770,ko01100,ko01501,map00520,map00531,map00770,map01100,map01501 M00628 R00022,R01625,R05963,R07809,R07810,R10831 RC00002,RC00049 ko00000,ko00001,ko00002,ko01000 Bacteria 1MZBF@1224,2KWUE@206389,2VT0P@28216,COG0736@1,COG0736@2 NA|NA|NA I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein HGDHCNMN_02715 748247.AZKH_2832 3.9e-123 447.6 Rhodocyclales pdxJ GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 ko:K03474 ko00750,ko01100,map00750,map01100 M00124 R05838 RC01476 ko00000,ko00001,ko00002,ko01000 iAF1260.b2564,iAF987.Gmet_1885,iB21_1397.B21_02422,iBWG_1329.BWG_2328,iEC55989_1330.EC55989_2852,iECBD_1354.ECBD_1117,iECB_1328.ECB_02458,iECDH10B_1368.ECDH10B_2732,iECDH1ME8569_1439.ECDH1ME8569_2491,iECD_1391.ECD_02458,iECH74115_1262.ECH74115_3800,iECIAI1_1343.ECIAI1_2675,iECO103_1326.ECO103_3142,iECO111_1330.ECO111_3290,iECO26_1355.ECO26_3611,iECSE_1348.ECSE_2852,iECSP_1301.ECSP_3509,iECW_1372.ECW_m2792,iECs_1301.ECs3430,iEKO11_1354.EKO11_1169,iEcDH1_1363.EcDH1_1104,iEcE24377_1341.EcE24377A_2850,iEcHS_1320.EcHS_A2719,iEcolC_1368.EcolC_1113,iG2583_1286.G2583_3145,iJO1366.b2564,iJR904.b2564,iWFL_1372.ECW_m2792,iY75_1357.Y75_RS13390 Bacteria 1MU9W@1224,2KV09@206389,2VHY7@28216,COG0854@1,COG0854@2 NA|NA|NA H Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate HGDHCNMN_02716 497321.C664_06908 7.5e-87 327.0 Rhodocyclales recO GO:0008150,GO:0009314,GO:0009628,GO:0050896 2.6.99.2 ko:K03474,ko:K03584 ko00750,ko01100,ko03440,map00750,map01100,map03440 M00124 R05838 RC01476 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1RHIC@1224,2KW9J@206389,2VJUC@28216,COG1381@1,COG1381@2 NA|NA|NA L Involved in DNA repair and RecF pathway recombination HGDHCNMN_02717 748247.AZKH_2834 3.6e-123 448.0 Rhodocyclales era GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009898,GO:0009987,GO:0016020,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0019843,GO:0019897,GO:0019898,GO:0022613,GO:0031234,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0036211,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044877,GO:0046777,GO:0070181,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1901564 ko:K03595 ko00000,ko03009,ko03029 Bacteria 1MUKT@1224,2KVT3@206389,2VHYP@28216,COG1159@1,COG1159@2 NA|NA|NA S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism HGDHCNMN_02718 76114.ebA5539 2.8e-80 305.1 Rhodocyclales rnc GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019899,GO:0022613,GO:0032296,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Bacteria 1MUQ6@1224,2KW7B@206389,2VI4M@28216,COG0571@1,COG0571@2 NA|NA|NA J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism HGDHCNMN_02719 1000565.METUNv1_00632 5.1e-20 104.0 Rhodocyclales Bacteria 1N71K@1224,2KXCZ@206389,2VWEY@28216,COG4969@1,COG4969@2 NA|NA|NA NU Domain of unknown function (DUF4845) HGDHCNMN_02720 748247.AZKH_2837 6.2e-116 423.7 Rhodocyclales lepB 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Bacteria 1MXUF@1224,2KUHJ@206389,2VJ9D@28216,COG0681@1,COG0681@2 NA|NA|NA U Belongs to the peptidase S26 family HGDHCNMN_02721 1123487.KB892841_gene4331 1.2e-300 1038.5 Rhodocyclales lepA GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0006950,GO:0006970,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009268,GO:0009409,GO:0009628,GO:0009651,GO:0009987,GO:0010467,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043021,GO:0043023,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K03596 ko05134,map05134 ko00000,ko00001 Bacteria 1MVZA@1224,2KVPJ@206389,2VHM5@28216,COG0481@1,COG0481@2 NA|NA|NA J Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner HGDHCNMN_02722 62928.azo1635 1e-20 105.5 Rhodocyclales 1.8.1.9 ko:K00384 ko00450,map00450 R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 Bacteria 1QVC9@1224,2KXAK@206389,2VYGG@28216,COG0526@1,COG0526@2 NA|NA|NA CO COG0526 Thiol-disulfide isomerase and thioredoxins HGDHCNMN_02723 640081.Dsui_2455 3.3e-163 581.6 Rhodocyclales mucD 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1MU63@1224,2KUVY@206389,2VI4Q@28216,COG0265@1,COG0265@2 NA|NA|NA M Belongs to the peptidase S1C family HGDHCNMN_02724 62928.azo1633 1.5e-16 92.8 Rhodocyclales rseC GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0016020,GO:0044464,GO:0050896,GO:0071944 ko:K03803 ko00000,ko03021 Bacteria 1NE9V@1224,2KXF7@206389,2VX1J@28216,COG3086@1,COG3086@2 NA|NA|NA T Positive regulator of sigma(E), RseC/MucC HGDHCNMN_02725 76114.ebA5465 7.4e-95 354.0 Rhodocyclales rseB GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0044464,GO:0045152 ko:K03598 ko00000,ko03021 Bacteria 1MUQ8@1224,2KUKH@206389,2VMZQ@28216,COG3026@1,COG3026@2 NA|NA|NA T Sigma E regulatory protein, MucB RseB HGDHCNMN_02726 76114.ebA5464 3e-32 145.2 Rhodocyclales rseA GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 ko:K03597 ko00000,ko03021 Bacteria 1QANZ@1224,2KXA7@206389,2VVPR@28216,COG3073@1,COG3073@2 NA|NA|NA T Anti sigma-E protein RseA HGDHCNMN_02727 748247.AZKH_2844 1.6e-95 355.5 Rhodocyclales rpoE GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0006970,GO:0008150,GO:0009266,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 ko:K03088 ko00000,ko03021 Bacteria 1MX7T@1224,2KUG9@206389,2VHR2@28216,COG1595@1,COG1595@2 NA|NA|NA K Belongs to the sigma-70 factor family. ECF subfamily HGDHCNMN_02728 1123367.C666_08530 2.5e-249 867.8 Rhodocyclales nadB GO:0000166,GO:0001716,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008734,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0015922,GO:0016491,GO:0016638,GO:0016641,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044318,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.3.5.4,1.4.3.16 ko:K00244,ko:K00278 ko00020,ko00190,ko00250,ko00620,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00250,map00620,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map02020 M00009,M00011,M00115,M00150,M00173 R00357,R00481,R02164 RC00006,RC00045,RC02566 ko00000,ko00001,ko00002,ko01000 iAF1260.b2574,iBWG_1329.BWG_2338,iECDH10B_1368.ECDH10B_2742,iECDH1ME8569_1439.ECDH1ME8569_2501,iETEC_1333.ETEC_2787,iEcDH1_1363.EcDH1_1094,iJN678.nadB,iJO1366.b2574,iJR904.b2574,iLF82_1304.LF82_1433,iNRG857_1313.NRG857_12785,iSbBS512_1146.nadB,iY75_1357.Y75_RS13445,iYL1228.KPN_02899 Bacteria 1RBQW@1224,2KUYZ@206389,2VHA7@28216,COG0029@1,COG0029@2 NA|NA|NA H Catalyzes the oxidation of L-aspartate to iminoaspartate HGDHCNMN_02730 305700.B447_12494 9.5e-212 742.7 Rhodocyclales fabF GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033817,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 iAF1260.b1095,iAPECO1_1312.APECO1_176,iB21_1397.B21_01099,iBWG_1329.BWG_0943,iE2348C_1286.E2348C_1187,iEC042_1314.EC042_1165,iEC55989_1330.EC55989_1207,iECABU_c1320.ECABU_c13085,iECBD_1354.ECBD_2506,iECB_1328.ECB_01091,iECDH10B_1368.ECDH10B_1167,iECDH1ME8569_1439.ECDH1ME8569_1030,iECD_1391.ECD_01091,iECED1_1282.ECED1_1238,iECH74115_1262.ECH74115_1474,iECIAI1_1343.ECIAI1_1130,iECIAI39_1322.ECIAI39_2066,iECO103_1326.ECO103_1140,iECO111_1330.ECO111_1372,iECO26_1355.ECO26_1428,iECOK1_1307.ECOK1_1202,iECP_1309.ECP_1087,iECS88_1305.ECS88_1109,iECSE_1348.ECSE_1159,iECSF_1327.ECSF_0994,iECSP_1301.ECSP_1396,iECUMN_1333.ECUMN_1270,iECW_1372.ECW_m1203,iECs_1301.ECs1473,iEKO11_1354.EKO11_2739,iETEC_1333.ETEC_1160,iEcDH1_1363.EcDH1_2552,iEcE24377_1341.EcE24377A_1216,iEcSMS35_1347.EcSMS35_2032,iG2583_1286.G2583_1355,iJO1366.b1095,iJR904.b1095,iLF82_1304.LF82_0607,iNRG857_1313.NRG857_05280,iSF_1195.SF1099,iSFxv_1172.SFxv_1251,iS_1188.S1179,iUMN146_1321.UM146_11850,iWFL_1372.ECW_m1203,iY75_1357.Y75_RS05720,iZ_1308.Z1734,ic_1306.c1365 Bacteria 1MU1X@1224,2KUW2@206389,2VI6I@28216,COG0304@1,COG0304@2 NA|NA|NA I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP HGDHCNMN_02731 62928.azo1626 1.4e-31 141.7 Rhodocyclales acpP GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 ko:K02078 ko00000,ko00001 Bacteria 1MZ4P@1224,2KWX1@206389,2VTZH@28216,COG0236@1,COG0236@2 NA|NA|NA IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis HGDHCNMN_02732 748247.AZKH_2849 3.1e-104 384.8 Rhodocyclales Bacteria 1MU6X@1224,2KUFK@206389,2VJ3S@28216,COG1028@1,COG1028@2 NA|NA|NA IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) HGDHCNMN_02733 62928.azo1624 1.1e-122 446.4 Rhodocyclales fabD GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 M00082 R01626,R11671 RC00004,RC00039,RC02727 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1MV6N@1224,2KV8M@206389,2VJF7@28216,COG0331@1,COG0331@2 NA|NA|NA I malonyl CoA-acyl carrier protein transacylase HGDHCNMN_02734 62928.azo1623 4e-141 507.7 Rhodocyclales fabH GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 iAF1260.b1091,iAPECO1_1312.APECO1_172,iBWG_1329.BWG_0939,iE2348C_1286.E2348C_1183,iEC55989_1330.EC55989_1203,iECABU_c1320.ECABU_c13040,iECDH10B_1368.ECDH10B_1163,iECDH1ME8569_1439.ECDH1ME8569_1026,iECED1_1282.ECED1_1234,iECH74115_1262.ECH74115_1470,iECIAI39_1322.ECIAI39_2070,iECO103_1326.ECO103_1136,iECO111_1330.ECO111_1368,iECO26_1355.ECO26_1424,iECOK1_1307.ECOK1_1198,iECP_1309.ECP_1083,iECS88_1305.ECS88_1105,iECSP_1301.ECSP_1392,iECW_1372.ECW_m1199,iECs_1301.ECs1469,iEKO11_1354.EKO11_2743,iETEC_1333.ETEC_1156,iEcDH1_1363.EcDH1_2556,iEcE24377_1341.EcE24377A_1212,iEcSMS35_1347.EcSMS35_2036,iG2583_1286.G2583_1351,iJO1366.b1091,iJR904.b1091,iLF82_1304.LF82_0609,iNRG857_1313.NRG857_05260,iSSON_1240.SSON_1111,iSbBS512_1146.SbBS512_E2233,iUMN146_1321.UM146_11870,iUMNK88_1353.UMNK88_1361,iUTI89_1310.UTI89_C1216,iWFL_1372.ECW_m1199,iY75_1357.Y75_RS05700,iZ_1308.Z1730,ic_1306.c1360 Bacteria 1MU9N@1224,2KUAG@206389,2VI2A@28216,COG0332@1,COG0332@2 NA|NA|NA I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids HGDHCNMN_02735 497321.C664_07003 8.8e-139 500.0 Rhodocyclales plsX GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0071704,GO:0090407,GO:1901576 2.3.1.15 ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 iEcDH1_1363.EcDH1_2557,iSFxv_1172.SFxv_1246,iY75_1357.Y75_RS05695 Bacteria 1MVM3@1224,2KUA0@206389,2VI25@28216,COG0416@1,COG0416@2 NA|NA|NA I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA HGDHCNMN_02736 76114.ebC5 6.3e-24 115.9 Rhodocyclales rpmF GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 ko:K02911 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 1N6RF@1224,2KX6E@206389,2VVP5@28216,COG0333@1,COG0333@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL32 family HGDHCNMN_02737 748247.AZKH_2854 5.1e-31 141.0 Rhodocyclales yceD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 ko:K07040 ko00000 Bacteria 1PGKW@1224,2KX2U@206389,2VUIG@28216,COG1399@1,COG1399@2 NA|NA|NA S metal-binding, possibly nucleic acid-binding protein HGDHCNMN_02738 497321.C664_07018 6.9e-72 276.9 Rhodocyclales maf GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030312,GO:0044464,GO:0047429,GO:0071944 1.1.1.25,2.1.1.190 ko:K00014,ko:K03215,ko:K06287 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02413 RC00206 ko00000,ko00001,ko00002,ko01000,ko03009 Bacteria 1RDA9@1224,2KW2F@206389,2VQUQ@28216,COG0424@1,COG0424@2 NA|NA|NA D Maf-like protein HGDHCNMN_02739 748247.AZKH_2856 4.3e-79 301.2 Rhodocyclales rsmI_1 2.1.1.198 ko:K07056 ko00000,ko01000,ko03009 Bacteria 1RARW@1224,2KW5K@206389,2VQ34@28216,COG0313@1,COG0313@2 NA|NA|NA H Uroporphyrin-III C tetrapyrrole HGDHCNMN_02740 522306.CAP2UW1_1529 8.6e-35 152.9 unclassified Betaproteobacteria 2.7.1.3 ko:K00846,ko:K05710 ko00051,ko00360,ko01100,ko01120,ko01220,map00051,map00360,map01100,map01120,map01220 M00545 R00866,R03819,R06782,R06783 RC00002,RC00017,RC00098,RC00608 br01602,ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1KR0W@119066,1N72F@1224,2VTX8@28216,COG2146@1,COG2146@2 NA|NA|NA P Rieske [2Fe-2S] domain HGDHCNMN_02741 85643.Tmz1t_2434 2.8e-18 97.4 Rhodocyclales gph 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 R01334 RC00017 ko00000,ko00001,ko01000 Bacteria 1RDA7@1224,2KVFF@206389,2VIZ2@28216,COG0546@1,COG0546@2 NA|NA|NA S HAD-superfamily hydrolase HGDHCNMN_02742 395494.Galf_1817 7.9e-43 180.6 Bacteria Bacteria 2FFF2@1,347CN@2 NA|NA|NA HGDHCNMN_02744 305700.B447_02853 3e-201 708.0 Rhodocyclales ko:K07576 ko00000 Bacteria 1MUDD@1224,2KW91@206389,2VQF0@28216,COG1236@1,COG1236@2 NA|NA|NA J Exonuclease of the beta-lactamase fold involved in RNA processing HGDHCNMN_02745 1123020.AUIE01000013_gene239 2.2e-41 175.3 Pseudomonas aeruginosa group Bacteria 1MZZT@1224,1S9JG@1236,1YIJX@136841,COG1943@1,COG1943@2 NA|NA|NA L Transposase IS200 like HGDHCNMN_02746 748247.AZKH_3600 2.3e-130 472.2 Rhodocyclales Bacteria 1NB2F@1224,28HH1@1,2KXGW@206389,2VXUS@28216,2Z7SS@2 NA|NA|NA HGDHCNMN_02747 748247.AZKH_3601 1.4e-228 798.9 Rhodocyclales algI ko:K19294 ko00000 Bacteria 1MUXN@1224,2KUFR@206389,2VISD@28216,COG1696@1,COG1696@2 NA|NA|NA M MBOAT, membrane-bound O-acyltransferase family HGDHCNMN_02748 62928.azo3212 3.3e-114 417.9 Rhodocyclales parA ko:K03496 ko00000,ko03036,ko04812 Bacteria 1MVEZ@1224,2KVGX@206389,2VK7W@28216,COG1192@1,COG1192@2 NA|NA|NA D Cobyrinic acid ac-diamide synthase HGDHCNMN_02749 296591.Bpro_4858 0.0 1213.4 Comamonadaceae maeB GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 ko:K00027,ko:K00029,ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,ko02020,map00430,map00620,map00640,map00680,map00710,map00720,map01100,map01120,map01200,map02020 M00169,M00172,M00357,M00579 R00214,R00216,R00230,R00921 RC00004,RC00105,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1637 Bacteria 1MU0A@1224,2VIYB@28216,4AAXI@80864,COG0280@1,COG0280@2,COG0281@1,COG0281@2 NA|NA|NA C Phosphate acetyl butaryl transferase HGDHCNMN_02750 296591.Bpro_4859 3.5e-36 157.9 Comamonadaceae rnaSA GO:0005575,GO:0005576 3.1.27.3 ko:K01167,ko:K15125 ko05133,map05133 ko00000,ko00001,ko00536,ko01000,ko03016,ko03019 Bacteria 1MZEZ@1224,2VTZ7@28216,4AEXX@80864,COG4290@1,COG4290@2 NA|NA|NA F guanine-specific ribonuclease N1 and T1 HGDHCNMN_02751 1408164.MOLA814_01202 6.7e-77 293.5 Betaproteobacteria Bacteria 1RD25@1224,2VR9C@28216,COG2732@1,COG2732@2 NA|NA|NA K PFAM Barstar (barnase inhibitor) HGDHCNMN_02752 1157708.KB907451_gene4751 1.2e-108 399.4 Comamonadaceae ksgA GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 ko:K02528 R10716 RC00003,RC03257 ko00000,ko01000,ko03009 Bacteria 1MVNU@1224,2VH15@28216,4A9ZR@80864,COG0030@1,COG0030@2 NA|NA|NA J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits HGDHCNMN_02753 365046.Rta_37890 1e-129 470.3 Comamonadaceae surA GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022607,GO:0030288,GO:0030313,GO:0031647,GO:0031975,GO:0033218,GO:0036211,GO:0042277,GO:0042597,GO:0043163,GO:0043165,GO:0043170,GO:0043412,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0044764,GO:0045229,GO:0050821,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0060274,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564 5.2.1.8 ko:K03769,ko:K03771 ko00000,ko01000,ko03110 Bacteria 1MVB3@1224,2VHHS@28216,4AAUW@80864,COG0760@1,COG0760@2 NA|NA|NA M Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation HGDHCNMN_02754 338969.Rfer_0098 1.9e-224 785.8 Comamonadaceae lptD GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008150,GO:0008509,GO:0008514,GO:0008643,GO:0009279,GO:0009636,GO:0009987,GO:0010876,GO:0015075,GO:0015136,GO:0015144,GO:0015157,GO:0015267,GO:0015288,GO:0015318,GO:0015478,GO:0015711,GO:0015739,GO:0015772,GO:0015849,GO:0015920,GO:0016020,GO:0016021,GO:0016043,GO:0019867,GO:0022607,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031975,GO:0033036,GO:0034219,GO:0034220,GO:0042221,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045203,GO:0045229,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0098656,GO:1901264,GO:1901505,GO:1903825,GO:1905039 ko:K04744,ko:K22110 ko00000,ko02000 1.B.35.1,1.B.35.2,1.B.42.1 iG2583_1286.G2583_0058,ic_1306.c5389 Bacteria 1MUJC@1224,2VIJ7@28216,4A9K5@80864,COG1452@1,COG1452@2 NA|NA|NA M Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane HGDHCNMN_02755 1031711.RSPO_c02876 5e-12 78.6 Burkholderiaceae lptD GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008150,GO:0008509,GO:0008514,GO:0008643,GO:0009279,GO:0009636,GO:0009987,GO:0010876,GO:0015075,GO:0015136,GO:0015144,GO:0015157,GO:0015267,GO:0015288,GO:0015318,GO:0015478,GO:0015711,GO:0015739,GO:0015772,GO:0015849,GO:0015920,GO:0016020,GO:0016021,GO:0016043,GO:0019867,GO:0022607,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031975,GO:0033036,GO:0034219,GO:0034220,GO:0042221,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045203,GO:0045229,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0098656,GO:1901264,GO:1901505,GO:1903825,GO:1905039 ko:K04744,ko:K22110 ko00000,ko02000 1.B.35.1,1.B.35.2,1.B.42.1 iG2583_1286.G2583_0058,ic_1306.c5389 Bacteria 1K0D0@119060,1MUJC@1224,2VIJ7@28216,COG1452@1,COG1452@2 NA|NA|NA M Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane HGDHCNMN_02756 1304883.KI912532_gene1012 9.7e-249 865.9 Rhodocyclales actP ko:K14393 ko00000,ko02000 2.A.21.7 Bacteria 1MVJ8@1224,2KUFG@206389,2VHP4@28216,COG4147@1,COG4147@2 NA|NA|NA S Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family HGDHCNMN_02757 76114.ebA3736 4e-87 327.8 Rhodocyclales mdcY Bacteria 1MWG2@1224,2KUEP@206389,2VN1E@28216,COG1802@1,COG1802@2 NA|NA|NA K transcriptional HGDHCNMN_02760 388399.SSE37_08438 5.6e-34 151.0 Alphaproteobacteria Bacteria 1R4Y3@1224,28KU0@1,2U3GI@28211,2ZAAY@2 NA|NA|NA HGDHCNMN_02761 1304883.KI912532_gene1193 8.8e-88 330.9 Rhodocyclales fieF Bacteria 1MUDS@1224,2KVRB@206389,2VJ1J@28216,COG0053@1,COG0053@2 NA|NA|NA U Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family HGDHCNMN_02762 640081.Dsui_1047 2.1e-52 211.8 Rhodocyclales Bacteria 1REHH@1224,2KWCV@206389,2VR3P@28216,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese Homology Domain HGDHCNMN_02763 748247.AZKH_0680 7e-182 643.3 Rhodocyclales nadA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 ko:K03517 ko00760,ko01100,map00760,map01100 M00115 R04292 RC01119 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWQU@1224,2KUN9@206389,2VH6N@28216,COG0379@1,COG0379@2 NA|NA|NA H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate HGDHCNMN_02764 497321.C664_15998 3.4e-111 407.9 Rhodocyclales ybhP Bacteria 1MVN7@1224,2KV21@206389,2VJYW@28216,COG3568@1,COG3568@2 NA|NA|NA L Endonuclease Exonuclease phosphatase HGDHCNMN_02765 85643.Tmz1t_3641 1.2e-131 476.5 Rhodocyclales clsB ko:K06131 ko00564,ko01100,map00564,map01100 R07390 RC00017 ko00000,ko00001,ko01000 Bacteria 1MWUW@1224,2KUFP@206389,2VI41@28216,COG1502@1,COG1502@2 NA|NA|NA I Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol HGDHCNMN_02766 395494.Galf_2896 2.3e-53 215.3 Nitrosomonadales aut 2.7.1.167,2.7.7.70 ko:K03272,ko:K21345 ko00540,ko01100,map00540,map01100 M00064 R05644,R05646 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1REW3@1224,2VR6S@28216,44VQT@713636,COG0615@1,COG0615@2 NA|NA|NA H Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose HGDHCNMN_02767 305700.B447_05458 9.4e-285 985.7 Rhodocyclales acd ko:K20035 ko00920,map00920 R11130 RC03363 ko00000,ko00001,ko01000 Bacteria 1MU20@1224,2KUFZ@206389,2VGZD@28216,COG1960@1,COG1960@2 NA|NA|NA C COG1960 Acyl-CoA dehydrogenases HGDHCNMN_02768 62928.azo1701 1.7e-69 269.2 Rhodocyclales Bacteria 1RDHR@1224,2KWF3@206389,2VRKF@28216,COG3235@1,COG3235@2 NA|NA|NA S Cobalt uptake substrate-specific transmembrane region HGDHCNMN_02769 497321.C664_00785 1e-117 429.9 Rhodocyclales etfA GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 ko:K03522 ko00000,ko04147 Bacteria 1MUFI@1224,2KUDQ@206389,2VI6W@28216,COG2025@1,COG2025@2 NA|NA|NA C Electron transfer flavoprotein alpha subunit HGDHCNMN_02770 76114.ebA6511 1.2e-119 436.0 Rhodocyclales etfB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 ko:K03521 ko00000 Bacteria 1MVH6@1224,2KUTX@206389,2VHXJ@28216,COG2086@1,COG2086@2 NA|NA|NA C Electron transfer flavoprotein HGDHCNMN_02771 497321.C664_00795 7.5e-66 256.9 Rhodocyclales MA20_20735 Bacteria 1R59A@1224,2KW5N@206389,2VQA0@28216,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HGDHCNMN_02772 748247.AZKH_2746 4.6e-90 337.8 Rhodocyclales yjjV ko:K03424 ko00000,ko01000 Bacteria 1MW5C@1224,2KV6C@206389,2VH67@28216,COG0084@1,COG0084@2 NA|NA|NA L TatD related DNase HGDHCNMN_02773 1123367.C666_10095 8.6e-113 413.3 Rhodocyclales Echdc 4.2.1.17 ko:K01715 ko00650,ko01200,map00650,map01200 R03026 RC00831 ko00000,ko00001,ko01000 Bacteria 1MUJ7@1224,2KVF2@206389,2VIP5@28216,COG1024@1,COG1024@2 NA|NA|NA I Belongs to the enoyl-CoA hydratase isomerase family HGDHCNMN_02774 497321.C664_00810 1.9e-27 129.4 Rhodocyclales ko:K02067,ko:K18480 ko02010,map02010 M00210,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27,3.A.1.27.1 Bacteria 1N8NT@1224,2KX93@206389,2VTC7@28216,COG3218@1,COG3218@2 NA|NA|NA S ABC-type transport auxiliary lipoprotein component HGDHCNMN_02775 76114.ebA6521 4.9e-75 288.1 Rhodocyclales iamC ko:K02067 ko02010,map02010 M00210,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1MU4B@1224,2KWAS@206389,2VJHA@28216,COG1463@1,COG1463@2 NA|NA|NA Q ABC-type transport system involved in resistance to organic solvents, periplasmic component HGDHCNMN_02776 305700.B447_05508 7.4e-85 320.5 Rhodocyclales iamA ko:K02065 ko02010,map02010 M00210,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1MUSD@1224,2KVH1@206389,2VJK6@28216,COG1127@1,COG1127@2 NA|NA|NA Q ABC-type transport system involved in resistance to organic solvents, ATPase component HGDHCNMN_02777 748247.AZKH_2751 1.3e-127 463.0 Rhodocyclales iamB ko:K02066 ko02010,map02010 M00210,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1MVPN@1224,2KUN0@206389,2VH5N@28216,COG0767@1,COG0767@2 NA|NA|NA Q Permease MlaE HGDHCNMN_02778 748247.AZKH_2752 1.4e-212 745.7 Rhodocyclales ppx 3.6.1.11,3.6.1.40 ko:K01524 ko00230,map00230 R03409 RC00002 ko00000,ko00001,ko01000 Bacteria 1MV35@1224,2KUQ9@206389,2VI1K@28216,COG0248@1,COG0248@2 NA|NA|NA FP Exopolyphosphatase HGDHCNMN_02779 85643.Tmz1t_2279 0.0 1107.4 Rhodocyclales ppk 2.7.4.1 ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 iJN746.PP_5217 Bacteria 1MUM3@1224,2KUJF@206389,2VHH8@28216,COG0855@1,COG0855@2 NA|NA|NA H Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) HGDHCNMN_02780 1120999.JONM01000059_gene2787 1.5e-16 94.4 Proteobacteria Bacteria 1NEB9@1224,COG4447@1,COG4447@2 NA|NA|NA UW cellulose binding HGDHCNMN_02781 76114.ebA6019 1.4e-192 679.1 Rhodocyclales bioA GO:0003674,GO:0003824,GO:0004015,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.6.1.62 ko:K00833 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03231 RC00006,RC00887 ko00000,ko00001,ko00002,ko01000,ko01007 iIT341.HP0976,iUTI89_1310.UTI89_C0772,iZ_1308.Z0993 Bacteria 1MU2N@1224,2KVFT@206389,2VKJI@28216,COG0161@1,COG0161@2 NA|NA|NA H Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family HGDHCNMN_02782 748247.AZKH_2398 7.4e-145 520.4 Rhodocyclales bioF GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.47,2.8.1.6 ko:K00652,ko:K01012 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R01078,R03210,R10124 RC00004,RC00039,RC00441,RC02725 ko00000,ko00001,ko00002,ko01000,ko01007 iEC55989_1330.EC55989_0819,iECO111_1330.ECO111_0837,iECO26_1355.ECO26_0902,iSDY_1059.SDY_0830 Bacteria 1MVVH@1224,2KUQ7@206389,2VH25@28216,COG0156@1,COG0156@2 NA|NA|NA H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide HGDHCNMN_02783 76114.ebA6017 1.8e-64 252.7 Rhodocyclales bioH 2.1.1.197,3.1.1.85 ko:K02169,ko:K02170 ko00780,ko01100,map00780,map01100 M00572 R09543,R09725 RC00003,RC00460,RC00461 ko00000,ko00001,ko00002,ko01000 Bacteria 1N2R9@1224,2KX3Q@206389,2VRME@28216,COG2267@1,COG2267@2 NA|NA|NA I Alpha/beta hydrolase family HGDHCNMN_02784 76114.ebA6013 6.9e-67 260.8 Rhodocyclales bioC GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008757,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0010340,GO:0016053,GO:0016740,GO:0016741,GO:0016787,GO:0016788,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032259,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0052689,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197 ko:K02169 ko00780,ko01100,map00780,map01100 M00572 R09543 RC00003,RC00460 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_0791,iSBO_1134.SBO_0664,iSFV_1184.SFV_0760,iSF_1195.SF0727,iSFxv_1172.SFxv_0792,iSSON_1240.SSON_0756,iS_1188.S0768,iSbBS512_1146.SbBS512_E2575 Bacteria 1PA5F@1224,2KWI0@206389,2VQIW@28216,COG0500@1,COG2226@2 NA|NA|NA H Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway HGDHCNMN_02785 76114.ebA6011 1.9e-81 308.9 Rhodocyclales bioD GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004141,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017076,GO:0017144,GO:0018130,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.3.3 ko:K01935 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03182 RC00868 ko00000,ko00001,ko00002,ko01000 iEC55989_1330.EC55989_0821,iECIAI1_1343.ECIAI1_0813,iECO103_1326.ECO103_0813,iECO111_1330.ECO111_0839,iECO26_1355.ECO26_0904,iECSE_1348.ECSE_0831,iECW_1372.ECW_m0833,iEKO11_1354.EKO11_3108,iEcE24377_1341.EcE24377A_0841,iSFV_1184.SFV_0761,iSSON_1240.SSON_0757,iWFL_1372.ECW_m0833,ic_1306.c0858 Bacteria 1RDRK@1224,2KW6V@206389,2VR4C@28216,COG0132@1,COG0132@2 NA|NA|NA H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring HGDHCNMN_02786 76114.ebA6008 7e-83 313.9 Rhodocyclales trmH GO:0001510,GO:0002128,GO:0002938,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008175,GO:0008757,GO:0009020,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0106050,GO:0140098,GO:0140101,GO:1901360 2.1.1.185,2.1.1.34 ko:K00556,ko:K03218,ko:K03437,ko:K15333 ko00000,ko01000,ko03009,ko03016,ko03036 Bacteria 1R9JA@1224,2KW4N@206389,2VQDG@28216,COG0566@1,COG0566@2 NA|NA|NA J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family HGDHCNMN_02787 62928.azo1894 1.9e-48 198.7 Rhodocyclales Bacteria 1RH6D@1224,2KX0H@206389,2WFVC@28216,COG5615@1,COG5615@2 NA|NA|NA S Copper resistance protein D HGDHCNMN_02788 62928.azo1895 5.5e-72 277.3 Rhodocyclales rnhB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1RA65@1224,2KW1V@206389,2VQ06@28216,COG0164@1,COG0164@2 NA|NA|NA L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids HGDHCNMN_02789 76114.ebA6002 7.4e-158 563.5 Rhodocyclales lpxB GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008194,GO:0008289,GO:0008610,GO:0008654,GO:0008915,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0019637,GO:0019897,GO:0019898,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 ko:K00748 ko00540,ko01100,map00540,map01100 M00060 R04606 RC00005,RC00059 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 GT19 iE2348C_1286.E2348C_0187,iEcolC_1368.EcolC_3478,iIT341.HP0867 Bacteria 1MVBI@1224,2KUHP@206389,2VIBP@28216,COG0763@1,COG0763@2 NA|NA|NA M Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell HGDHCNMN_02790 62928.azo1897 7e-104 383.6 Rhodocyclales lpxA 2.3.1.129 ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 M00060 R04567 RC00039,RC00055 ko00000,ko00001,ko00002,ko01000,ko01005 iIT341.HP1375 Bacteria 1MUHQ@1224,2KV6X@206389,2VHDG@28216,COG1043@1,COG1043@2 NA|NA|NA M Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell HGDHCNMN_02791 1123367.C666_02520 2.3e-59 235.0 Rhodocyclales fabZ GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0008693,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019171,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0047451,GO:0071704,GO:0072330,GO:1901576 4.2.1.59 ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121 RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004 iJN746.PP_1602 Bacteria 1RH2T@1224,2KWAJ@206389,2VRKQ@28216,COG0764@1,COG0764@2 NA|NA|NA I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs HGDHCNMN_02792 1123487.KB892865_gene1557 8.8e-78 297.4 Rhodocyclales lpxD GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 ko:K02536 ko00540,ko01100,map00540,map01100 M00060 R04550 RC00039,RC00166 ko00000,ko00001,ko00002,ko01000,ko01005 ic_1306.c0216 Bacteria 1MUX6@1224,2KVNR@206389,2VHJR@28216,COG1044@1,COG1044@2 NA|NA|NA M Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell HGDHCNMN_02793 85643.Tmz1t_2169 2e-51 208.8 Rhodocyclales skp GO:0001530,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0019867,GO:0022417,GO:0022607,GO:0030288,GO:0030312,GO:0030313,GO:0031647,GO:0031975,GO:0032978,GO:0033036,GO:0034613,GO:0042597,GO:0042802,GO:0043163,GO:0043165,GO:0043170,GO:0044085,GO:0044091,GO:0044238,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0050821,GO:0051082,GO:0051179,GO:0051205,GO:0051234,GO:0051604,GO:0051641,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0070727,GO:0071704,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0097367,GO:1901564 ko:K06142 ko00000 Bacteria 1RD8X@1224,2KWH8@206389,2VRZI@28216,COG2825@1,COG2825@2 NA|NA|NA M Belongs to the skp family HGDHCNMN_02794 748247.AZKH_2386 0.0 1095.1 Rhodocyclales bamA GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 ko:K07277 ko00000,ko02000,ko03029 1.B.33 Bacteria 1MU0D@1224,2KV13@206389,2VHTX@28216,COG4775@1,COG4775@2 NA|NA|NA M Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane HGDHCNMN_02795 76114.ebA5995 9.7e-157 560.1 Rhodocyclales rseP GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 3.4.21.107 ko:K04771,ko:K11749 ko01503,ko02020,ko02024,ko04112,map01503,map02020,map02024,map04112 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1MU91@1224,2KV3Y@206389,2VHBW@28216,COG0750@1,COG0750@2 NA|NA|NA M zinc metalloprotease HGDHCNMN_02796 62928.azo1903 7.7e-142 510.4 Rhodocyclales dxr GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0050897,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05688 RC01452 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1814,iECOK1_1307.ECOK1_0174,iECS88_1305.ECS88_0183,iHN637.CLJU_RS06420,iNJ661.Rv2870c,iUMN146_1321.UM146_23670,iUTI89_1310.UTI89_C0188 Bacteria 1MU4G@1224,2KVYE@206389,2VHJY@28216,COG0743@1,COG0743@2 NA|NA|NA I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) HGDHCNMN_02797 76114.ebA5992 1.9e-86 325.9 Rhodocyclales cdsA GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 iJN746.PP_1596,iSDY_1059.SDY_0191 Bacteria 1MWSV@1224,2KW5H@206389,2VMM0@28216,COG0575@1,COG0575@2 NA|NA|NA I Belongs to the CDS family HGDHCNMN_02798 640081.Dsui_2690 1.8e-99 369.0 Rhodocyclales uppS GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 ko:K00806 ko00900,ko01110,map00900,map01110 R06447 RC00279,RC02839 ko00000,ko00001,ko01000,ko01006 Bacteria 1MVP1@1224,2KV64@206389,2VH2E@28216,COG0020@1,COG0020@2 NA|NA|NA H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids HGDHCNMN_02799 305700.B447_05243 1.1e-77 296.2 Rhodocyclales frr GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02838 ko00000,ko03012 Bacteria 1N66T@1224,2KV5P@206389,2VIUA@28216,COG0233@1,COG0233@2 NA|NA|NA J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another HGDHCNMN_02800 62928.azo1907 7.4e-108 396.7 Rhodocyclales pyrH GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0033862,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.22 ko:K09903 ko00240,ko01100,map00240,map01100 R00158 RC00002 ko00000,ko00001,ko01000 Bacteria 1MV3N@1224,2KVY1@206389,2VH8A@28216,COG0528@1,COG0528@2 NA|NA|NA F Catalyzes the reversible phosphorylation of UMP to UDP HGDHCNMN_02801 1121035.AUCH01000017_gene2301 7.1e-132 476.9 Rhodocyclales tsf GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0019899,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051020,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 ko:K02357 ko00000,ko03012,ko03029 Bacteria 1MUS2@1224,2KU95@206389,2VHSG@28216,COG0264@1,COG0264@2 NA|NA|NA J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome HGDHCNMN_02802 1123367.C666_02465 5.2e-112 410.6 Rhodocyclales rpsB GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02967 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MU33@1224,2KUV5@206389,2VI8V@28216,COG0052@1,COG0052@2 NA|NA|NA J Belongs to the universal ribosomal protein uS2 family HGDHCNMN_02803 76114.ebA5984 8e-130 469.9 Rhodocyclales map GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 ko:K01265 ko00000,ko01000,ko01002 Bacteria 1MU99@1224,2KUH5@206389,2VH2K@28216,COG0024@1,COG0024@2 NA|NA|NA J Methionine aminopeptidase HGDHCNMN_02804 748247.AZKH_2376 0.0 1218.0 Rhodocyclales glnD GO:0003674,GO:0003824,GO:0006082,GO:0006355,GO:0006464,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0008652,GO:0008773,GO:0009058,GO:0009064,GO:0009084,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0045893,GO:0045935,GO:0046394,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070569,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:0140096,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 ko:K00990 ko02020,map02020 ko00000,ko00001,ko01000 Bacteria 1MV54@1224,2KV4M@206389,2VI2G@28216,COG2844@1,COG2844@2 NA|NA|NA O Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen HGDHCNMN_02805 1144342.PMI40_02365 2.2e-69 268.5 Oxalobacteraceae def2 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 ko:K01462 ko00000,ko01000 Bacteria 1R9XK@1224,2VQ0U@28216,472J5@75682,COG0242@1,COG0242@2 NA|NA|NA J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions HGDHCNMN_02806 748247.AZKH_2797 1.8e-101 375.6 Rhodocyclales mtaP 2.4.2.28,2.4.2.44 ko:K00772,ko:K19696 ko00270,ko01100,map00270,map01100 M00034 R01402,R09668 RC00063,RC02819 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUWW@1224,2KV4J@206389,2VJQQ@28216,COG0005@1,COG0005@2 NA|NA|NA F Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage HGDHCNMN_02807 748247.AZKH_2798 0.0 1095.5 Rhodocyclales typA GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 ko:K06207 ko00000 Bacteria 1MV5Q@1224,2KUXJ@206389,2VH2W@28216,COG1217@1,COG1217@2 NA|NA|NA T GTP-binding protein TypA HGDHCNMN_02808 305700.B447_05198 1.6e-131 475.7 Rhodocyclales galU 2.7.7.9 ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 M00129,M00361,M00362,M00549 R00289 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV5F@1224,2KUS0@206389,2VH00@28216,COG1210@1,COG1210@2 NA|NA|NA M UTP-glucose-1-phosphate uridylyltransferase HGDHCNMN_02809 62928.azo2001 2.4e-287 994.6 Rhodocyclales ligA GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003909,GO:0003911,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0050896,GO:0051103,GO:0051287,GO:0051716,GO:0070403,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1901576 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 iEC55989_1330.EC55989_2701,iECABU_c1320.ECABU_c27320,iECIAI1_1343.ECIAI1_2469,iECO103_1326.ECO103_2930,iECO111_1330.ECO111_3141,iECO26_1355.ECO26_3464,iECSE_1348.ECSE_2702,iECW_1372.ECW_m2640,iEKO11_1354.EKO11_1317,iEcE24377_1341.EcE24377A_2698,iEcSMS35_1347.EcSMS35_2566,iWFL_1372.ECW_m2640,iYL1228.KPN_02758,ic_1306.c2945 Bacteria 1MV3R@1224,2KUWJ@206389,2VIDE@28216,COG0272@1,COG0272@2 NA|NA|NA L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA HGDHCNMN_02810 62928.azo2002 4.8e-98 364.8 Rhodocyclales zipA ko:K03528 ko00000,ko03036 Bacteria 1NJ6D@1224,2KW2J@206389,2VHQ7@28216,COG3115@1,COG3115@2 NA|NA|NA D Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins HGDHCNMN_02811 748247.AZKH_2802 0.0 1289.2 Rhodocyclales smc ko:K03529 ko00000,ko03036 Bacteria 1MUAQ@1224,2KV3S@206389,2VJMF@28216,COG1196@1,COG1196@2 NA|NA|NA D Required for chromosome condensation and partitioning HGDHCNMN_02812 34007.IT40_24135 1.5e-119 436.0 Paracoccus hisC1 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MWPU@1224,2PVHN@265,2TRV5@28211,COG0079@1,COG0079@2 NA|NA|NA E Catalyzes the formation of histidinol phosphate and 2-oxoglutarate from glutamate and imidazole acetol-phosphate HGDHCNMN_02813 1121035.AUCH01000013_gene3102 2.3e-45 189.1 Rhodocyclales acd ko:K20035 ko00920,map00920 R11130 RC03363 ko00000,ko00001,ko01000 Bacteria 1MU20@1224,2KUFZ@206389,2VGZD@28216,COG1960@1,COG1960@2 NA|NA|NA C COG1960 Acyl-CoA dehydrogenases HGDHCNMN_02814 1000565.METUNv1_03444 4.9e-30 138.3 Rhodocyclales Bacteria 1RBJ1@1224,2KW4A@206389,2VMZX@28216,COG0745@1,COG0745@2 NA|NA|NA T Transcriptional regulatory protein, C terminal HGDHCNMN_02815 266265.Bxe_C0924 9.8e-76 290.4 Burkholderiaceae aroK GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71,4.2.3.4 ko:K00891,ko:K07075,ko:K13829,ko:K15546,ko:K15773 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412,R03083 RC00002,RC00078,RC00847 ko00000,ko00001,ko00002,ko01000,ko02048,ko03000 iAPECO1_1312.APECO1_1620,iECOK1_1307.ECOK1_0367,iECS88_1305.ECS88_0383,iUMN146_1321.UM146_15425,iUTI89_1310.UTI89_C0407,iYL1228.KPN_00332 Bacteria 1KD9T@119060,1MX66@1224,2W1KZ@28216,COG0703@1,COG0703@2,COG1396@1,COG1396@2 NA|NA|NA F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate HGDHCNMN_02816 1123367.C666_06545 7.4e-98 363.6 Rhodocyclales ko:K01996 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MVVC@1224,2KVMK@206389,2VJNG@28216,COG0410@1,COG0410@2 NA|NA|NA E ATP-binding cassette (ABC) transporters are multidomain membrane proteins, responsible for the controlled efflux and influx of substances (allocrites) across cellular membranes. ATP-binding protein is for coupling the energy of ATP hydrolysis to conformational changes in the transmembrane domains HGDHCNMN_02817 62928.azo1992 6.8e-262 909.8 Rhodocyclales MA20_18645 ko:K01995,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MUTY@1224,2KUY7@206389,2VH2P@28216,COG0411@1,COG0411@2,COG4177@1,COG4177@2 NA|NA|NA P Belongs to the binding-protein-dependent transport system permease family HGDHCNMN_02818 62928.azo0312 1e-121 443.4 Rhodocyclales ko:K01997 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MXMC@1224,2KUY3@206389,2VJ1Y@28216,COG0559@1,COG0559@2 NA|NA|NA U Belongs to the binding-protein-dependent transport system permease family HGDHCNMN_02819 159087.Daro_0910 9.1e-64 250.0 Rhodocyclales Bacteria 1N95V@1224,2KYVZ@206389,2VVYB@28216,COG3945@1,COG3945@2 NA|NA|NA S Hemerythrin HHE cation binding HGDHCNMN_02820 159087.Daro_0909 1e-115 422.9 Rhodocyclales ko:K01996 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MVVC@1224,2KVMK@206389,2VJNG@28216,COG0410@1,COG0410@2 NA|NA|NA E ATP-binding cassette (ABC) transporters are multidomain membrane proteins, responsible for the controlled efflux and influx of substances (allocrites) across cellular membranes. ATP-binding protein is for coupling the energy of ATP hydrolysis to conformational changes in the transmembrane domains HGDHCNMN_02821 159087.Daro_0908 1.1e-283 982.2 Rhodocyclales MA20_18645 ko:K01995,ko:K01997,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MUTY@1224,2KUY7@206389,2VH2P@28216,COG0411@1,COG0411@2,COG0559@1,COG0559@2,COG4177@1,COG4177@2 NA|NA|NA P Belongs to the binding-protein-dependent transport system permease family HGDHCNMN_02822 159087.Daro_0908 5.8e-146 523.9 Rhodocyclales MA20_18645 ko:K01995,ko:K01997,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MUTY@1224,2KUY7@206389,2VH2P@28216,COG0411@1,COG0411@2,COG0559@1,COG0559@2,COG4177@1,COG4177@2 NA|NA|NA P Belongs to the binding-protein-dependent transport system permease family HGDHCNMN_02823 159087.Daro_0904 2.9e-175 621.3 Betaproteobacteria ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MXR4@1224,2W054@28216,COG0683@1,COG0683@2 NA|NA|NA E Amino acid amide ABC transporter substrate-binding protein, HAAT family HGDHCNMN_02824 305700.B447_20468 1.2e-80 306.6 Rhodocyclales mhpR GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K02624,ko:K05818 ko00000,ko03000 Bacteria 1QRZN@1224,2KYDQ@206389,2VI6A@28216,COG1414@1,COG1414@2 NA|NA|NA K helix_turn_helix isocitrate lyase regulation HGDHCNMN_02825 76114.ebA4979 0.0 1277.3 Rhodocyclales ackA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.8,2.7.2.1 ko:K00925,ko:K15024 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00230,R00315,R00921,R01353 RC00002,RC00004,RC00043,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0409 Bacteria 1MW61@1224,2KXZH@206389,2VHRC@28216,COG0282@1,COG0282@2,COG0664@1,COG0664@2,COG4869@1,COG4869@2 NA|NA|NA H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction HGDHCNMN_02826 375286.mma_0056 1.3e-100 373.2 Oxalobacteraceae ko:K07052 ko00000 Bacteria 1NSVZ@1224,2VKZ5@28216,472FX@75682,COG1835@1,COG1835@2 NA|NA|NA I Acyltransferase family HGDHCNMN_02827 322710.Avin_15050 1e-149 536.2 Gammaproteobacteria 1.13.11.16 ko:K05713,ko:K06990,ko:K07282 ko00360,ko01120,ko01220,map00360,map01120,map01220 M00545 R04376,R06788 RC01140,RC01364 br01602,ko00000,ko00001,ko00002,ko01000,ko04812 Bacteria 1R369@1224,1T63U@1236,COG1355@1,COG1355@2 NA|NA|NA S Catalytic LigB subunit of aromatic ring-opening dioxygenase HGDHCNMN_02828 1192124.LIG30_4397 8.4e-197 693.0 Burkholderiaceae 1.14.14.12 ko:K16047 ko00984,ko01100,ko01120,map00984,map01100,map01120 R09819 RC00236 ko00000,ko00001,ko01000 Bacteria 1JZST@119060,1MXMQ@1224,2VNPR@28216,COG1960@1,COG1960@2 NA|NA|NA I acyl-CoA dehydrogenase HGDHCNMN_02829 159087.Daro_0903 1.3e-62 246.1 Rhodocyclales 1.5.1.36 ko:K00484,ko:K09024 ko00240,ko00350,ko00740,ko01100,ko01120,ko01220,map00240,map00350,map00740,map01100,map01120,map01220 R02698,R03299,R05705,R09748,R09750,R09936 RC00046,RC00126,RC02732 ko00000,ko00001,ko01000 Bacteria 1MZKY@1224,2KZAZ@206389,2VVEB@28216,COG1853@1,COG1853@2 NA|NA|NA S Flavin reductase like domain HGDHCNMN_02830 522306.CAP2UW1_3853 4.1e-253 881.3 unclassified Betaproteobacteria rpfG 3.1.3.3,4.6.1.1 ko:K01768,ko:K07315 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko03021 Bacteria 1KQI6@119066,1MV37@1224,2VJ21@28216,COG2206@1,COG2206@2,COG2770@1,COG2770@2,COG3437@1,COG3437@2 NA|NA|NA KT HD domain HGDHCNMN_02831 1005048.CFU_3072 1.3e-100 373.2 Oxalobacteraceae Bacteria 1R4MG@1224,2VISE@28216,474HG@75682,COG2207@1,COG2207@2 NA|NA|NA K Arabinose-binding domain of AraC transcription regulator, N-term HGDHCNMN_02832 7159.AAEL015588-PA 9.9e-127 459.5 Nematocera 1.1.1.178,1.1.1.35 ko:K08683 ko00280,ko01100,ko01110,ko01130,ko05010,map00280,map01100,map01110,map01130,map05010 R04203 RC00525 ko00000,ko00001,ko01000,ko03029,ko04147 Arthropoda 38CCA@33154,3BD0V@33208,3CY8V@33213,3SIZ9@50557,41TTR@6656,452SZ@7147,45GDF@7148,KOG1199@1,KOG1199@2759 NA|NA|NA Q Belongs to the short-chain dehydrogenases reductases (SDR) family HGDHCNMN_02833 523791.Kkor_1061 5.9e-18 96.7 Oceanospirillales ivd 1.3.8.4 ko:K00253 ko00280,ko01100,map00280,map01100 M00036 R04095 RC00246 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUDR@1224,1RMMJ@1236,1XI0R@135619,COG1960@1,COG1960@2 NA|NA|NA I Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA HGDHCNMN_02834 497321.C664_18072 3.3e-281 973.8 Rhodocyclales mccB 2.1.3.15,6.4.1.3,6.4.1.4 ko:K01969,ko:K15052 ko00280,ko00720,ko01100,ko01200,map00280,map00720,map01100,map01200 M00036,M00376 R01859,R04138 RC00097,RC00367,RC00609,RC00942 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_3290 Bacteria 1MVAX@1224,2KVX8@206389,2VI77@28216,COG4799@1,COG4799@2 NA|NA|NA I Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) HGDHCNMN_02835 748247.AZKH_0514 3.4e-106 391.3 Rhodocyclales liuC 4.2.1.18 ko:K13766 ko00280,ko01100,map00280,map01100 M00036 R02085 RC02416 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVEC@1224,2KU7S@206389,2VI5G@28216,COG1024@1,COG1024@2 NA|NA|NA I Belongs to the enoyl-CoA hydratase isomerase family HGDHCNMN_02836 62928.azo3068 0.0 1088.6 Rhodocyclales mccA GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.4.1.1,6.4.1.4 ko:K01960,ko:K01968 ko00020,ko00280,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00280,map00620,map00720,map01100,map01120,map01200,map01230 M00036,M00173,M00620 R00344,R04138 RC00040,RC00367,RC00942 ko00000,ko00001,ko00002,ko01000 Bacteria 1P6RE@1224,2KV56@206389,2VH59@28216,COG4770@1,COG4770@2 NA|NA|NA I Acetyl propionyl-CoA carboxylase, alpha subunit HGDHCNMN_02838 305700.B447_12062 1.2e-289 1001.9 Rhodocyclales acsf 6.2.1.3 ko:K00666,ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 Bacteria 1MU6G@1224,2KW0Z@206389,2VHAT@28216,COG0318@1,COG0318@2 NA|NA|NA IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II HGDHCNMN_02839 85643.Tmz1t_0753 7.5e-129 466.8 Rhodocyclales yngG GO:0003674,GO:0003824,GO:0004419,GO:0005488,GO:0016829,GO:0016830,GO:0016833,GO:0043167,GO:0043169,GO:0046872 4.1.3.4 ko:K01640 ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146 M00036,M00088 R01360,R08090 RC00502,RC00503,RC01118,RC01946 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUMX@1224,2KUNG@206389,2VIUW@28216,COG0119@1,COG0119@2 NA|NA|NA E HMGL-like HGDHCNMN_02840 1348657.M622_08155 5.8e-13 80.1 Rhodocyclales speE 2.5.1.16 ko:K00797 ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100 M00034,M00133 R01920,R02869,R08359 RC00021,RC00053 ko00000,ko00001,ko00002,ko01000 Bacteria 1RBWW@1224,2KUTS@206389,2VK7S@28216,COG0421@1,COG0421@2 NA|NA|NA H Spermidine synthase HGDHCNMN_02841 1479238.JQMZ01000001_gene28 1.5e-09 69.7 Hyphomonadaceae Bacteria 1RFVJ@1224,2BFHU@1,2U8MF@28211,329BM@2,4416G@69657 NA|NA|NA HGDHCNMN_02843 497321.C664_18007 5e-179 634.0 Rhodocyclales hemL GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016853,GO:0016866,GO:0016869,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042286,GO:0042440,GO:0042802,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 5.4.3.8 ko:K01845 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02272 RC00677 ko00000,ko00001,ko00002,ko01000,ko01007 iSB619.SA_RS08395,iUMNK88_1353.UMNK88_158 Bacteria 1MUY5@1224,2KUUJ@206389,2VHK9@28216,COG0001@1,COG0001@2 NA|NA|NA H Aminotransferase HGDHCNMN_02844 748247.AZKH_3832 2.4e-67 261.9 Rhodocyclales thiE GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 ko:K00788 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 Bacteria 1RDSU@1224,2KW2I@206389,2VSR5@28216,COG0352@1,COG0352@2 NA|NA|NA H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) HGDHCNMN_02845 1163617.SCD_n02927 1.7e-86 325.9 Betaproteobacteria thiD 2.7.1.49,2.7.4.7 ko:K00941 ko00730,ko01100,map00730,map01100 M00127 R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU9J@1224,2VKD2@28216,COG0351@1,COG0351@2 NA|NA|NA H Phosphomethylpyrimidine kinase HGDHCNMN_02846 264198.Reut_A2624 1.1e-23 115.2 Burkholderiaceae rubA ko:K03618 ko00000 Bacteria 1KA31@119060,1N731@1224,2VVP4@28216,COG1773@1,COG1773@2 NA|NA|NA C PFAM Rubredoxin-type Fe(Cys)4 protein HGDHCNMN_02847 85643.Tmz1t_3688 4.8e-56 223.8 Rhodocyclales Bacteria 1RDYB@1224,2KWB2@206389,2VR2Q@28216,COG0745@1,COG0745@2 NA|NA|NA T cheY-homologous receiver domain HGDHCNMN_02848 62928.azo3454 6.3e-47 193.4 Rhodocyclales Bacteria 1RI9T@1224,2KWTI@206389,2VSSD@28216,COG0745@1,COG0745@2 NA|NA|NA T response regulator receiver HGDHCNMN_02849 76114.ebA1749 6e-51 207.2 Rhodocyclales pilI ko:K02659,ko:K03408 ko02020,ko02025,ko02030,map02020,map02025,map02030 ko00000,ko00001,ko02035,ko02044 Bacteria 1N07Q@1224,2KX20@206389,2VU6N@28216,COG0835@1,COG0835@2 NA|NA|NA NT Chemotaxis signal transduction protein HGDHCNMN_02850 62928.azo3456 5e-184 651.4 Rhodocyclales pilJ ko:K02660 ko02020,ko02025,map02020,map02025 ko00000,ko00001,ko02035,ko02044 Bacteria 1MU9B@1224,2KU9U@206389,2VJBX@28216,COG0840@1,COG0840@2 NA|NA|NA NT Methyl-accepting chemotaxis protein HGDHCNMN_02851 62928.azo3457 0.0 1569.7 Rhodocyclales pilL ko:K02487,ko:K06596,ko:K11526 ko02020,ko02025,map02020,map02025 M00507,M00508 ko00000,ko00001,ko00002,ko01001,ko02022,ko02035 Bacteria 1MUAG@1224,2KUBP@206389,2VJSZ@28216,COG0643@1,COG0643@2,COG0745@1,COG0745@2,COG2198@1,COG2198@2 NA|NA|NA KNT COG0643 Chemotaxis protein histidine kinase and related kinases HGDHCNMN_02852 85643.Tmz1t_3678 5e-271 940.3 Rhodocyclales rnb GO:0000175,GO:0000178,GO:0000932,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019439,GO:0022613,GO:0032991,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0035770,GO:0036464,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1902494,GO:1905354,GO:1990904 3.1.13.1 ko:K01147 ko00000,ko01000,ko03016 Bacteria 1NGSQ@1224,2KVMW@206389,2VHMM@28216,COG0557@1,COG0557@2 NA|NA|NA K RNB HGDHCNMN_02853 85643.Tmz1t_3679 2.1e-89 335.9 Rhodocyclales tonB3 ko:K03832 ko00000,ko02000 2.C.1.1 Bacteria 1MUMT@1224,2KUYN@206389,2VKSW@28216,COG0810@1,COG0810@2 NA|NA|NA M COG0810 Periplasmic protein TonB, links inner and outer membranes HGDHCNMN_02854 748247.AZKH_3828 2e-104 385.6 Rhodocyclales aroE GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 ko:K00014,ko:K10714 ko00400,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00400,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00022 R02413,R08059 RC00202,RC00206 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVH4@1224,2KUFF@206389,2VHHC@28216,COG0169@1,COG0169@2 NA|NA|NA E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) HGDHCNMN_02855 1000565.METUNv1_02953 2.1e-91 342.0 Rhodocyclales mtgA 2.4.1.129,3.4.16.4 ko:K03814,ko:K05365,ko:K05366,ko:K21464 ko00550,ko01100,ko01501,map00550,map01100,map01501 R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 1RDAQ@1224,2KUYM@206389,2VHW8@28216,COG0744@1,COG0744@2 NA|NA|NA M Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors HGDHCNMN_02856 62928.azo2892 2.5e-165 588.2 Rhodocyclales dusB GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 ko:K05540 ko00000,ko01000,ko03016 Bacteria 1MV5V@1224,2KUU1@206389,2VHBP@28216,COG0042@1,COG0042@2 NA|NA|NA J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines HGDHCNMN_02857 748247.AZKH_0920 2.4e-26 124.4 Rhodocyclales fis GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K03557,ko:K07712 ko02020,ko05111,map02020,map05111 M00497 ko00000,ko00001,ko00002,ko02022,ko03000,ko03036,ko03400 Bacteria 1N7MJ@1224,2KXF1@206389,2VVQK@28216,COG2901@1,COG2901@2 NA|NA|NA KL Bacterial regulatory protein, Fis family HGDHCNMN_02858 62928.azo2894 1.5e-246 858.6 Rhodocyclales purH GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 iEcHS_1320.EcHS_A4240,iPC815.YPO3728 Bacteria 1MUDQ@1224,2KUUV@206389,2VJPX@28216,COG0138@1,COG0138@2 NA|NA|NA F Bifunctional purine biosynthesis protein PurH HGDHCNMN_02859 497321.C664_14409 2.1e-198 698.4 Rhodocyclales purD GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.4.13 ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144 RC00090,RC00166 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_3417,iECSF_1327.ECSF_3859,iJN746.PP_4823,iPC815.YPO3729 Bacteria 1MUAH@1224,2KUEI@206389,2VH9J@28216,COG0151@1,COG0151@2 NA|NA|NA F Belongs to the GARS family HGDHCNMN_02860 1316927.ATKI01000085_gene849 1.6e-13 82.4 Pseudomonas fluorescens group 5.3.3.10 ko:K01826 ko00350,ko01120,ko01220,map00350,map01120,map01220 M00533 R04379,R04482 RC01141,RC01162 ko00000,ko00001,ko00002,ko01000 Bacteria 1MZ5W@1224,1RUD5@1236,1YQQW@136843,COG3232@1,COG3232@2 NA|NA|NA G 5-carboxymethyl-2-hydroxymuconate isomerase HGDHCNMN_02861 497321.C664_14419 4.2e-148 530.8 Rhodocyclales hemF GO:0003674,GO:0003824,GO:0004109,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016634,GO:0018130,GO:0019438,GO:0030145,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0046872,GO:0046906,GO:0046914,GO:0046983,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.3.3 ko:K00228 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03220 RC00884 ko00000,ko00001,ko00002,ko01000 iAF1260.b2436,iBWG_1329.BWG_2198,iECDH10B_1368.ECDH10B_2601,iECDH1ME8569_1439.ECDH1ME8569_2370,iETEC_1333.ETEC_2549,iEcDH1_1363.EcDH1_1225,iEcHS_1320.EcHS_A2573,iEcolC_1368.EcolC_1243,iJO1366.b2436,iJR904.b2436,iY75_1357.Y75_RS12760 Bacteria 1MWMF@1224,2KV9H@206389,2VIN4@28216,COG0408@1,COG0408@2 NA|NA|NA H Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX HGDHCNMN_02863 745411.B3C1_09677 4.1e-25 121.3 Gammaproteobacteria Bacteria 1PT4C@1224,1SRT5@1236,2FJW5@1,34BIN@2 NA|NA|NA HGDHCNMN_02864 1238450.VIBNISOn1_30244 1.2e-61 243.4 Gammaproteobacteria 3.2.1.17 ko:K01185,ko:K11904 ko03070,map03070 M00334 ko00000,ko00001,ko00002,ko01000,ko02044 3.A.23.1 Bacteria 1MZJD@1224,1SA7C@1236,COG3409@1,COG3409@2,COG3772@1,COG3772@2 NA|NA|NA G Phage lysozyme HGDHCNMN_02865 1380356.JNIK01000017_gene2813 8.9e-33 146.7 Actinobacteria Bacteria 2GJ1F@201174,COG1028@1,COG1028@2 NA|NA|NA IQ Belongs to the short-chain dehydrogenases reductases (SDR) family HGDHCNMN_02866 571166.KI421510_gene266 3.8e-86 324.7 Alphaproteobacteria 1.3.8.4 ko:K00253 ko00280,ko01100,map00280,map01100 M00036 R04095 RC00246 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUDR@1224,2TTA1@28211,COG1960@1,COG1960@2 NA|NA|NA I Acyl-CoA dehydrogenase, C-terminal domain HGDHCNMN_02870 1123487.KB892841_gene4248 7.6e-93 347.4 Rhodocyclales rmuC ko:K09760 ko00000 Bacteria 1MWHV@1224,2KUM2@206389,2VJVZ@28216,COG1322@1,COG1322@2 NA|NA|NA S RmuC family HGDHCNMN_02871 62928.azo2314 7e-129 467.6 Rhodocyclales GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 ko:K00786 ko00000,ko01000 Bacteria 1P6JE@1224,2KU7A@206389,2VN72@28216,COG1807@1,COG1807@2 NA|NA|NA M Dolichyl-phosphate-mannose-protein mannosyltransferase HGDHCNMN_02872 748247.AZKH_2044 1.3e-181 642.9 Rhodocyclales arnT GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0010041,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016763,GO:0033692,GO:0034637,GO:0034645,GO:0042221,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0050896,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.2.43 ko:K07264 ko01503,map01503 M00721 R09773,R09774,R09781 RC00005 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 iEcHS_1320.EcHS_A2402 Bacteria 1NMIZ@1224,2KVVG@206389,2VMHK@28216,COG1807@1,COG1807@2 NA|NA|NA M Dolichyl-phosphate-mannose-protein mannosyltransferase HGDHCNMN_02873 748247.AZKH_2045 2.9e-153 548.1 Rhodocyclales arnC GO:0000271,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0030258,GO:0030259,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.83 ko:K00721 ko00510,ko01100,map00510,map01100 R01009 RC00005 ko00000,ko00001,ko01000,ko01003 GT2 Bacteria 1MWE5@1224,2KUAX@206389,2VJ5G@28216,COG0463@1,COG0463@2 NA|NA|NA M Glycosyltransferase like family 2 HGDHCNMN_02874 748247.AZKH_2046 1.1e-111 409.8 Rhodocyclales ko:K07027 ko00000,ko02000 4.D.2 Bacteria 1R5YC@1224,2KYE9@206389,2VXEW@28216,COG0392@1,COG0392@2 NA|NA|NA S Lysylphosphatidylglycerol synthase TM region HGDHCNMN_02875 62928.azo2159 7.3e-51 207.6 Rhodocyclales 3.4.23.36,3.6.1.27 ko:K03101,ko:K19302 ko00550,ko03060,map00550,map03060 R05627 RC00002 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria 1NAJ7@1224,2KZ5J@206389,2VX11@28216,COG0671@1,COG0671@2 NA|NA|NA I Acid phosphatase homologues HGDHCNMN_02876 1121878.AUGL01000002_gene2261 8.4e-42 178.3 Gammaproteobacteria Bacteria 1MU2C@1224,1RM8A@1236,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase HGDHCNMN_02877 748247.AZKH_2047 0.0 2190.6 Rhodocyclales purL GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 iECH74115_1262.ECH74115_3792,iECO111_1330.ECO111_3283,iECSP_1301.ECSP_3501,iECs_1301.ECs3423,iG2583_1286.G2583_3088,iJN746.PP_1037,ic_1306.c3080 Bacteria 1MYN4@1224,2KVJB@206389,2VHTE@28216,COG0046@1,COG0046@2,COG0047@1,COG0047@2 NA|NA|NA F Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate HGDHCNMN_02878 614083.AWQR01000005_gene1065 7.5e-43 179.5 Comamonadaceae etf 1.5.5.1 ko:K00311 ko00000,ko01000 Bacteria 1MVU6@1224,2VH37@28216,4AA63@80864,COG0644@1,COG0644@2,COG2440@1,COG2440@2 NA|NA|NA C Electron transfer flavoprotein-ubiquinone oxidoreductase HGDHCNMN_02879 62928.azo3799 3.2e-29 134.0 Rhodocyclales hypA ko:K04651 ko00000,ko03110 Bacteria 1MZJH@1224,2KX2G@206389,2VUFZ@28216,COG0375@1,COG0375@2 NA|NA|NA S Probably plays a role in a hydrogenase nickel cofactor insertion step HGDHCNMN_02880 266264.Rmet_1536 1.6e-103 382.9 Burkholderiaceae hypB ko:K03189,ko:K04652 ko00000,ko03110 Bacteria 1K4AY@119060,1MVBD@1224,2VJKH@28216,COG0378@1,COG0378@2 NA|NA|NA KO Hydrogenase HGDHCNMN_02881 62928.azo3801 1.1e-243 849.7 Rhodocyclales hypF ko:K04653,ko:K04656 ko00000 iAF987.Gmet_0119 Bacteria 1MVP8@1224,2KUF2@206389,2VHS4@28216,COG0068@1,COG0068@2 NA|NA|NA O Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide HGDHCNMN_02882 1121015.N789_03265 4.1e-20 104.0 Xanthomonadales mcrB ko:K07343 ko00000 Bacteria 1N0I3@1224,1SCE5@1236,1XAE3@135614,2CHW3@1,32S6N@2 NA|NA|NA S Pathogenicity locus HGDHCNMN_02883 85643.Tmz1t_3924 7.8e-22 109.4 Rhodocyclales hypC ko:K04653 ko00000 Bacteria 1N76Y@1224,2KX70@206389,2VVZH@28216,COG0298@1,COG0298@2 NA|NA|NA O Hydrogenase assembly chaperone hypC hupF HGDHCNMN_02884 395495.Lcho_2448 3e-180 637.9 unclassified Burkholderiales hypD ko:K04654 ko00000 Bacteria 1KJ1S@119065,1MU1F@1224,2VHKM@28216,COG0409@1,COG0409@2 NA|NA|NA O Belongs to the HypD family HGDHCNMN_02885 62928.azo2981 2.1e-232 812.0 Rhodocyclales Bacteria 1MVUZ@1224,2KVWR@206389,2VKC3@28216,COG0840@1,COG0840@2,COG3287@1,COG3287@2 NA|NA|NA NT FIST N domain HGDHCNMN_02886 748247.AZKH_3789 1.9e-152 545.4 Rhodocyclales hypE ko:K04655 ko00000 Bacteria 1MVCC@1224,2KVH9@206389,2VH3K@28216,COG0309@1,COG0309@2 NA|NA|NA O hydrogenase expression formation protein HypE HGDHCNMN_02887 365044.Pnap_2403 5.2e-39 166.8 Comamonadaceae Bacteria 1MZKW@1224,2VU7N@28216,4AI3A@80864,COG2329@1,COG2329@2 NA|NA|NA S Antibiotic biosynthesis monooxygenase HGDHCNMN_02888 748247.AZKH_3788 5.8e-223 780.4 Rhodocyclales hoxX ko:K19640 ko00000,ko02022 Bacteria 1MWYJ@1224,2KVS4@206389,2VK38@28216,COG0223@1,COG0223@2,COG1024@1,COG1024@2 NA|NA|NA IJ Formyl transferase, C-terminal domain HGDHCNMN_02889 640081.Dsui_1154 7e-201 706.8 Rhodocyclales hoxA ko:K07714,ko:K19641 ko02020,map02020 M00500,M00772 ko00000,ko00001,ko00002,ko02022 Bacteria 1MU0N@1224,2KUEY@206389,2VHSB@28216,COG2204@1,COG2204@2 NA|NA|NA T Bacterial regulatory protein, Fis family HGDHCNMN_02890 62928.azo3807 8.1e-153 546.6 Rhodocyclales hupU 1.12.7.2,1.12.99.6 ko:K00534,ko:K06282 ko00633,ko01120,map00633,map01120 R00019,R08034 RC00250 ko00000,ko00001,ko01000 Bacteria 1MWAC@1224,2KVZC@206389,2VKE2@28216,COG1740@1,COG1740@2 NA|NA|NA C NiFe/NiFeSe hydrogenase small subunit C-terminal HGDHCNMN_02891 748247.AZKH_3785 2.7e-189 668.3 Rhodocyclales hupV 1.12.99.6 ko:K06281 ko00633,ko01120,map00633,map01120 R08034 RC00250 ko00000,ko00001,ko01000 Bacteria 1MWFJ@1224,2KUS6@206389,2VKZS@28216,COG0374@1,COG0374@2 NA|NA|NA C Nickel-dependent hydrogenase HGDHCNMN_02892 93220.LV28_10225 6.2e-30 138.3 Burkholderiaceae Bacteria 1K8ZW@119060,1N1ZX@1224,2VSMT@28216,COG3103@1,COG4991@2 NA|NA|NA T Bacterial SH3 domain homologues HGDHCNMN_02893 1485544.JQKP01000001_gene1307 2.2e-76 292.7 Nitrosomonadales 3.4.24.25,3.4.24.26 ko:K01399,ko:K08604 ko01503,ko02024,ko05110,ko05111,map01503,map02024,map05110,map05111 ko00000,ko00001,ko01000,ko01002 Bacteria 1MU7T@1224,2VHFJ@28216,44W46@713636,COG2931@1,COG2931@2 NA|NA|NA Q Hemolysin-type calcium-binding region HGDHCNMN_02894 640081.Dsui_2031 1e-56 226.1 Rhodocyclales fcbC2 3.1.2.23 ko:K01075 ko00130,ko00362,ko01100,ko01110,ko01120,map00130,map00362,map01100,map01110,map01120 R01301 RC00004,RC00174 ko00000,ko00001,ko01000 Bacteria 1RF7Q@1224,2KWHU@206389,2VR5T@28216,COG0824@1,COG0824@2 NA|NA|NA S Thioesterase-like superfamily HGDHCNMN_02895 640081.Dsui_1148 6.6e-50 203.8 Rhodocyclales nikR GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016151,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0032991,GO:0032993,GO:0042802,GO:0043167,GO:0043169,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071840,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 ko:K07722 ko00000,ko03000 Bacteria 1RK4R@1224,2KWDQ@206389,2VR6M@28216,COG0864@1,COG0864@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_02896 62928.azo3810 3.3e-165 588.2 Rhodocyclales hupT 2.7.13.3 ko:K19661 ko02020,map02020 M00772 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1RCM9@1224,2KV0D@206389,2VJGE@28216,COG4191@1,COG4191@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_02897 266264.Rmet_1533 2.1e-90 339.0 Burkholderiaceae nixA ko:K07241 ko00000,ko02000 2.A.52.1 Bacteria 1K07W@119060,1MUYH@1224,2VJDC@28216,COG2042@1,COG3376@2 NA|NA|NA S rRNA processing HGDHCNMN_02898 640081.Dsui_1126 3.8e-213 748.0 Betaproteobacteria ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1N71E@1224,2VJZ9@28216,COG4206@1,COG4206@2 NA|NA|NA H TonB dependent receptor HGDHCNMN_02899 713586.KB900536_gene279 1.3e-24 120.2 Bacteria tonB ko:K03832 ko00000,ko02000 2.C.1.1 Bacteria COG0810@1,COG0810@2 NA|NA|NA M energy transducer activity HGDHCNMN_02900 640081.Dsui_0440 4.9e-15 88.6 Rhodocyclales Bacteria 1R4P9@1224,2KW2Y@206389,2VPZE@28216,COG1639@1,COG1639@2 NA|NA|NA T Signal transduction protein HGDHCNMN_02904 640081.Dsui_3099 2.1e-80 305.8 Rhodocyclales alkA 3.2.2.21 ko:K01247,ko:K13529 ko03410,map03410 ko00000,ko00001,ko01000,ko03000,ko03400 Bacteria 1PDQF@1224,2KVZQ@206389,2VH56@28216,COG0122@1,COG0122@2 NA|NA|NA L 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase HGDHCNMN_02905 859657.RPSI07_0899 1.4e-81 309.3 Burkholderiaceae alkB 1.14.11.33 ko:K03919 ko00000,ko01000,ko03400 Bacteria 1K2E9@119060,1N5HB@1224,2VHNU@28216,COG3145@1,COG3145@2 NA|NA|NA L Alkylated DNA repair protein HGDHCNMN_02906 279714.FuraDRAFT_0350 9e-126 456.8 Neisseriales ada GO:0001130,GO:0003674,GO:0003700,GO:0003824,GO:0003908,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006355,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016740,GO:0016741,GO:0018125,GO:0018193,GO:0018198,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044728,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070988,GO:0071704,GO:0080090,GO:0080111,GO:0090304,GO:0140110,GO:1901360,GO:1901564,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 2.1.1.63,3.2.2.21 ko:K00567,ko:K10778,ko:K13529,ko:K13530,ko:K15051 ko03410,map03410 ko00000,ko00001,ko01000,ko03000,ko03400 Bacteria 1N2YQ@1224,2KR22@206351,2VIAK@28216,COG0350@1,COG0350@2,COG2169@1,COG2169@2 NA|NA|NA L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated HGDHCNMN_02907 1437824.BN940_16151 2.7e-184 651.7 Alcaligenaceae pcd 1.2.1.3 ko:K00128 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW72@1224,2VIBR@28216,3T3DW@506,COG1012@1,COG1012@2 NA|NA|NA C belongs to the aldehyde dehydrogenase family HGDHCNMN_02909 1042876.PPS_1477 2.1e-110 405.6 Pseudomonas putida group gufA ko:K07238 ko00000,ko02000 2.A.5.5 Bacteria 1MWEZ@1224,1RNXU@1236,1YUVY@136845,COG0428@1,COG0428@2 NA|NA|NA P Zinc iron permease HGDHCNMN_02910 522306.CAP2UW1_3550 2.1e-64 251.9 Betaproteobacteria dps ko:K04047 ko00000,ko03036 Bacteria 1RAC5@1224,2VHJI@28216,COG0783@1,COG0783@2 NA|NA|NA P Belongs to the Dps family HGDHCNMN_02911 159087.Daro_0481 7.4e-232 809.7 Rhodocyclales aspA 4.3.1.1 ko:K01744 ko00250,ko01100,map00250,map01100 R00490 RC00316,RC02799 ko00000,ko00001,ko01000 Bacteria 1R9JY@1224,2KV2S@206389,2W02M@28216,COG1027@1,COG1027@2 NA|NA|NA E Aspartate ammonia-lyase HGDHCNMN_02912 159087.Daro_0480 7e-205 719.9 Rhodocyclales gltP ko:K03309,ko:K11102,ko:K11103 ko02020,map02020 ko00000,ko00001,ko02000 2.A.23,2.A.23.1.1,2.A.23.1.2,2.A.23.1.3,2.A.23.1.6,2.A.23.1.7 Bacteria 1MU0Q@1224,2KVCC@206389,2VIZB@28216,COG1301@1,COG1301@2 NA|NA|NA C Sodium:dicarboxylate symporter family HGDHCNMN_02913 1121035.AUCH01000006_gene650 2.4e-109 401.7 Rhodocyclales yfcA ko:K07090 ko00000 Bacteria 1MXNM@1224,2KU9Q@206389,2VHQA@28216,COG0730@1,COG0730@2 NA|NA|NA S membrane transporter protein HGDHCNMN_02914 159087.Daro_0478 2e-253 881.7 Rhodocyclales dctB 2.7.13.3 ko:K10125,ko:K17060 ko02020,map02020 M00504,M00653 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1RCM9@1224,2KUBQ@206389,2VIMC@28216,COG4191@1,COG4191@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_02915 1123367.C666_01930 1.7e-203 715.3 Rhodocyclales IV02_08980 ko:K10126,ko:K17061 ko02020,map02020 M00504,M00653 ko00000,ko00001,ko00002,ko02022 Bacteria 1MU0N@1224,2KVPP@206389,2VHSB@28216,COG2204@1,COG2204@2 NA|NA|NA T Bacterial regulatory protein, Fis family HGDHCNMN_02916 159087.Daro_1438 8.9e-33 146.0 Rhodocyclales Bacteria 1N7AI@1224,2KZKW@206389,2VWKJ@28216,COG3209@1,COG3209@2 NA|NA|NA M COG3209 Rhs family protein HGDHCNMN_02917 159087.Daro_1439 1.8e-25 121.3 Rhodocyclales Bacteria 1N6RI@1224,2E5WI@1,2KXDW@206389,2VXJ8@28216,330KJ@2 NA|NA|NA S Nif11 domain HGDHCNMN_02918 159087.Daro_1442 5.3e-72 276.9 Rhodocyclales cynS 4.2.1.104 ko:K01725 ko00910,map00910 R03546,R10079 RC00952 ko00000,ko00001,ko01000 Bacteria 1R9X0@1224,2KYRA@206389,2VQ5F@28216,COG1513@1,COG1513@2 NA|NA|NA H Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide HGDHCNMN_02919 748247.AZKH_1769 0.0 1127.5 Rhodocyclales Bacteria 1MUNC@1224,2KVPF@206389,2VNKT@28216,COG1262@1,COG1262@2,COG4976@1,COG4976@2 NA|NA|NA H Sulfatase-modifying factor enzyme 1 HGDHCNMN_02920 1265502.KB905961_gene349 3.6e-136 491.5 Comamonadaceae dinB 2.7.7.7 ko:K02346 ko00000,ko01000,ko03400 Bacteria 1MUUH@1224,2VJNS@28216,4A9Z0@80864,COG0389@1,COG0389@2 NA|NA|NA L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII HGDHCNMN_02921 1173020.Cha6605_0951 4.5e-31 140.6 Cyanobacteria ko:K07343 ko00000 Bacteria 1G9CZ@1117,COG3070@1,COG3070@2 NA|NA|NA K TfoX N-terminal domain HGDHCNMN_02922 1288826.MSNKSG1_04686 2.9e-65 255.0 Gammaproteobacteria cmoA ko:K15256 ko00000,ko01000,ko03016 Bacteria 1QZ2B@1224,1T5FM@1236,COG4976@1,COG4976@2 NA|NA|NA S Methyltransferase domain HGDHCNMN_02923 1304883.KI912532_gene1827 1.5e-93 349.4 Rhodocyclales ko:K17226 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 Bacteria 1RBHP@1224,2KXWM@206389,2VR7Y@28216,COG5501@1,COG5501@2 NA|NA|NA S Sulphur oxidation protein SoxZ HGDHCNMN_02924 159087.Daro_1026 2.1e-110 405.6 Rhodocyclales ko:K01138 ko00000,ko01000 Bacteria 1MX4H@1224,2KXKA@206389,2VN1Z@28216,COG0491@1,COG0491@2 NA|NA|NA S COG0491 Zn-dependent hydrolases, including glyoxylases HGDHCNMN_02925 745277.GRAQ_00985 3.9e-38 164.1 Gammaproteobacteria 4.1.1.44 ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 R03470 RC00938 ko00000,ko00001,ko01000 Bacteria 1MZ80@1224,1S54K@1236,COG0599@1,COG0599@2 NA|NA|NA S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity HGDHCNMN_02926 399739.Pmen_1087 1.3e-74 286.6 Pseudomonas aeruginosa group Bacteria 1MXJ6@1224,1RSIB@1236,1YDQ1@136841,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family HGDHCNMN_02927 1300345.LF41_2191 2.9e-35 155.2 Xanthomonadales ko:K16137 ko00000,ko03000 Bacteria 1QIJW@1224,1SDIA@1236,1X7IU@135614,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HGDHCNMN_02928 1163617.SCD_n00159 6.7e-55 220.3 Proteobacteria ko:K09004 ko00000 Bacteria 1N39D@1224,COG1416@1,COG1416@2 NA|NA|NA S DsrE/DsrF-like family HGDHCNMN_02929 1218084.BBJK01000131_gene7158 2.3e-121 442.6 Burkholderiaceae Bacteria 1K5QR@119060,1N0B0@1224,2VJBV@28216,COG4222@1,COG4222@2 NA|NA|NA C Esterase-like activity of phytase HGDHCNMN_02930 62928.azo0453 4.7e-268 930.2 Rhodocyclales atm1 ko:K06147,ko:K12531 ko02020,map02020 M00326 ko00000,ko00001,ko00002,ko02000,ko02044 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1NSKS@1224,2KV1E@206389,2WGG3@28216,COG5265@1,COG5265@2 NA|NA|NA O COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components HGDHCNMN_02931 76114.ebA2598 1.3e-13 81.6 Rhodocyclales Bacteria 1MWA1@1224,2KWQX@206389,2VPEY@28216,COG1280@1,COG1280@2 NA|NA|NA E LysE type translocator HGDHCNMN_02933 1304883.KI912532_gene3215 8.4e-85 320.5 Rhodocyclales cobA 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.3,4.99.1.4 ko:K02302,ko:K02303,ko:K03795,ko:K13542 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02864,R03165,R03194,R03947,R05807 RC00003,RC00871,RC01012,RC01034,RC01861 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUI0@1224,2KUJA@206389,2VICS@28216,COG0007@1,COG0007@2 NA|NA|NA H Belongs to the precorrin methyltransferase family HGDHCNMN_02934 595537.Varpa_5132 2.2e-39 167.9 Comamonadaceae ko:K07497 ko00000 Bacteria 1MVXQ@1224,2VHER@28216,4AASI@80864,COG2801@1,COG2801@2 NA|NA|NA L PFAM Integrase catalytic HGDHCNMN_02937 1123487.KB892835_gene3456 2.5e-218 764.6 Rhodocyclales miaB GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 ko:K06168 R10645,R10646,R10647 RC00003,RC00980,RC03221,RC03222 ko00000,ko01000,ko03016 Bacteria 1MURS@1224,2KU9F@206389,2VHQM@28216,COG0621@1,COG0621@2 NA|NA|NA J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine HGDHCNMN_02938 76114.ebA1337 5e-139 500.7 Rhodocyclales ybeZ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06217 ko00000 Bacteria 1MVDV@1224,2KUF6@206389,2VH9V@28216,COG1702@1,COG1702@2 NA|NA|NA T phosphate starvation-inducible protein PhoH HGDHCNMN_02939 1121035.AUCH01000005_gene45 5.2e-49 200.7 Rhodocyclales ybeY GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.6.99.2,3.5.4.5 ko:K01489,ko:K03474,ko:K03595,ko:K07042 ko00240,ko00750,ko00983,ko01100,map00240,map00750,map00983,map01100 M00124 R01878,R02485,R05838,R08221 RC00074,RC00514,RC01476 ko00000,ko00001,ko00002,ko01000,ko03009,ko03029 Bacteria 1MZ67@1224,2KWFT@206389,2VSHV@28216,COG0319@1,COG0319@2 NA|NA|NA J Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA HGDHCNMN_02940 85643.Tmz1t_0868 1.3e-116 426.0 Rhodocyclales corC GO:0001897,GO:0001906,GO:0001907,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009405,GO:0009987,GO:0016020,GO:0019835,GO:0019836,GO:0031640,GO:0035821,GO:0044003,GO:0044004,GO:0044179,GO:0044364,GO:0044403,GO:0044419,GO:0044464,GO:0044764,GO:0051701,GO:0051704,GO:0051715,GO:0051801,GO:0051817,GO:0051818,GO:0051883,GO:0052331,GO:0071944 ko:K06189 ko00000,ko02000 9.A.40.1.2 Bacteria 1QTU8@1224,2KV4Z@206389,2VIU8@28216,COG4535@1,COG4535@2 NA|NA|NA P Mg2 and Co2 transporter CorC HGDHCNMN_02941 76114.ebA1334 2.5e-166 592.0 Rhodocyclales lnt GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016021,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576 ko:K03820 ko00000,ko01000 GT2 iEcSMS35_1347.EcSMS35_0678,iSbBS512_1146.SbBS512_E0590 Bacteria 1MUBU@1224,2KUSA@206389,2VH1I@28216,COG0815@1,COG0815@2 NA|NA|NA M Transfers the fatty acyl group on membrane lipoproteins HGDHCNMN_02942 62928.azo0295 3.6e-19 101.3 Betaproteobacteria Bacteria 1N9KF@1224,2AR1G@1,2VSF8@28216,32YZ2@2 NA|NA|NA HGDHCNMN_02944 397945.Aave_0057 4.9e-67 261.5 Comamonadaceae ko:K07027 ko00000,ko02000 4.D.2 Bacteria 1R4IS@1224,2VR6X@28216,4AIGZ@80864,COG0392@1,COG0392@2 NA|NA|NA H Lysylphosphatidylglycerol synthase TM region HGDHCNMN_02945 666681.M301_1241 2e-41 175.3 Betaproteobacteria Bacteria 1NA3W@1224,2VTIS@28216,COG2246@1,COG2246@2 NA|NA|NA S GtrA-like protein HGDHCNMN_02946 397945.Aave_0059 2.5e-199 701.4 Comamonadaceae 1.3.3.15,1.3.3.4 ko:K00231 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03222,R04178 RC00885 ko00000,ko00001,ko00002,ko01000 Bacteria 1P80H@1224,2VNBE@28216,4AG24@80864,COG1232@1,COG1232@2 NA|NA|NA H PFAM amine oxidase HGDHCNMN_02947 1366050.N234_16580 9e-130 469.9 Burkholderiaceae 1.6.5.3,1.6.99.3 ko:K00329,ko:K00356 ko00190,map00190 R11945 RC00061 ko00000,ko00001,ko01000 Bacteria 1K4N0@119060,1PM6M@1224,2VMCW@28216,COG0702@1,COG0702@2 NA|NA|NA GM NAD(P)H-binding HGDHCNMN_02948 1472716.KBK24_0123955 9.4e-82 310.1 Burkholderiaceae Bacteria 1K3Q0@119060,1NGXF@1224,2VPF9@28216,COG0300@1,COG0300@2 NA|NA|NA S short-chain dehydrogenase reductase HGDHCNMN_02949 748247.AZKH_0573 8.7e-163 580.1 Rhodocyclales dprE1 1.1.3.8,1.1.98.3 ko:K00103,ko:K16653 ko00053,ko01100,map00053,map01100 M00129 R00647,R03184,R10053 RC00195,RC00346,RC00869 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV1Q@1224,2KVWC@206389,2VI37@28216,COG0277@1,COG0277@2 NA|NA|NA C FAD binding domain HGDHCNMN_02950 1042209.HK44_019355 4.6e-165 587.8 Gammaproteobacteria Bacteria 1MXCM@1224,1RRWB@1236,COG0382@1,COG0382@2 NA|NA|NA H PFAM UbiA prenyltransferase HGDHCNMN_02951 159087.Daro_1285 2.1e-112 412.1 Rhodocyclales rfaE 2.7.1.167,2.7.7.70 ko:K03272,ko:K21344 ko00540,ko01100,map00540,map01100 M00064 R05644,R05646 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1MV3Z@1224,2KV89@206389,2VHNS@28216,COG2870@1,COG2870@2 NA|NA|NA M pfkB family carbohydrate kinase HGDHCNMN_02952 196367.JNFG01000090_gene3771 3.4e-43 181.4 Burkholderiaceae ko:K07481 ko00000 Bacteria 1K1CT@119060,1MVTU@1224,2VK8B@28216,COG3039@1,COG3039@2 NA|NA|NA L COG Transposase and inactivated derivatives, IS5 family HGDHCNMN_02953 640081.Dsui_0784 1.5e-201 708.8 Rhodocyclales Bacteria 1MX3S@1224,2KV9B@206389,2VMMF@28216,COG3876@1,COG3876@2 NA|NA|NA S Protein of unknown function (DUF1343) HGDHCNMN_02954 640081.Dsui_0785 1.4e-45 189.5 Rhodocyclales Bacteria 1N1H7@1224,2C0PI@1,2KX1H@206389,2VUDK@28216,32VVI@2 NA|NA|NA HGDHCNMN_02955 85643.Tmz1t_0636 2.2e-57 228.4 Rhodocyclales Bacteria 1RHF1@1224,2KWJS@206389,2VSEH@28216,COG4125@1,COG4125@2 NA|NA|NA S Transmembrane Pair HGDHCNMN_02956 522306.CAP2UW1_1488 2.1e-20 104.4 Betaproteobacteria Bacteria 1NIMY@1224,2VXX4@28216,COG2608@1,COG2608@2 NA|NA|NA P Heavy-metal-associated domain HGDHCNMN_02957 159087.Daro_2876 7.1e-134 483.4 Rhodocyclales psd GO:0003674,GO:0003824,GO:0004609,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0071704,GO:0090407,GO:1901576 4.1.1.65 ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 M00093 R02055 RC00299 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_4379,iECSF_1327.ECSF_4049 Bacteria 1MVT4@1224,2KUHW@206389,2VJCQ@28216,COG0688@1,COG0688@2 NA|NA|NA I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) HGDHCNMN_02958 497321.C664_12015 1.2e-163 582.8 Rhodocyclales Bacteria 1QVKP@1224,2KZWK@206389,2WGTA@28216,COG2223@1,COG2223@2 NA|NA|NA P Major facilitator superfamily HGDHCNMN_02959 85643.Tmz1t_0859 3.3e-81 308.5 Rhodocyclales copZ ko:K07213,ko:K16264 ko04978,map04978 ko00000,ko00001,ko02000 2.A.4.1 Bacteria 1MUSS@1224,2KY1B@206389,2VJHB@28216,COG1230@1,COG1230@2,COG2608@1,COG2608@2 NA|NA|NA P Cation efflux family HGDHCNMN_02960 1304883.KI912532_gene2434 3.5e-131 474.6 Rhodocyclales hemN_3 Bacteria 1P9J0@1224,2KUVC@206389,2VN74@28216,COG1032@1,COG1032@2 NA|NA|NA C Elongator protein 3, MiaB family, Radical SAM HGDHCNMN_02961 857087.Metme_1963 2.6e-275 954.1 Methylococcales hsdM 2.1.1.72 ko:K03427 ko00000,ko01000,ko02048 Bacteria 1MW3A@1224,1RMRA@1236,1XE0X@135618,COG0286@1,COG0286@2 NA|NA|NA V DNA methylase HGDHCNMN_02962 748247.AZKH_2946 4.5e-189 667.5 Rhodocyclales spoVR GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 ko:K06415 ko00000 Bacteria 1MW6U@1224,2KVI3@206389,2VHJ7@28216,COG2719@1,COG2719@2 NA|NA|NA S SpoVR family HGDHCNMN_02963 62928.azo1266 6.2e-52 211.5 Rhodocyclales ko:K03686,ko:K05516 ko00000,ko03029,ko03036,ko03110 Bacteria 1REVS@1224,2KWDB@206389,2VRB6@28216,COG0484@1,COG0484@2 NA|NA|NA O heat shock protein DnaJ HGDHCNMN_02964 1123487.KB892834_gene3033 3.7e-179 634.4 Rhodocyclales yegQ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Bacteria 1MUQG@1224,2KVTM@206389,2VH51@28216,COG0826@1,COG0826@2 NA|NA|NA O Collagenase and related proteases HGDHCNMN_02965 1123367.C666_09420 3.8e-31 140.2 Rhodocyclales rpmE GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02909 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZ69@1224,2KX3D@206389,2VW5V@28216,COG0254@1,COG0254@2 NA|NA|NA J Binds the 23S rRNA HGDHCNMN_02966 62928.azo1520 5e-136 491.5 Rhodocyclales Bacteria 1PUE3@1224,2KUEG@206389,2VHPU@28216,COG1807@1,COG1807@2 NA|NA|NA M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family HGDHCNMN_02967 76114.ebA5208 5.7e-159 567.8 Rhodocyclales pgi GO:0001701,GO:0001704,GO:0001707,GO:0002262,GO:0002376,GO:0002637,GO:0002639,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004347,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0005929,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007369,GO:0007498,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009410,GO:0009435,GO:0009438,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009892,GO:0009987,GO:0010033,GO:0010243,GO:0010466,GO:0010594,GO:0010595,GO:0010605,GO:0010632,GO:0010634,GO:0010941,GO:0010951,GO:0014070,GO:0014072,GO:0016020,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0016866,GO:0017144,GO:0018130,GO:0019222,GO:0019242,GO:0019318,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030246,GO:0030334,GO:0030335,GO:0031090,GO:0031253,GO:0031323,GO:0031324,GO:0031625,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032787,GO:0032879,GO:0032880,GO:0033500,GO:0034101,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0040012,GO:0040017,GO:0042180,GO:0042181,GO:0042221,GO:0042493,GO:0042592,GO:0042593,GO:0042866,GO:0042981,GO:0042995,GO:0043005,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043278,GO:0043279,GO:0043281,GO:0043436,GO:0043523,GO:0043524,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045861,GO:0046031,GO:0046034,GO:0046184,GO:0046185,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048029,GO:0048332,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048598,GO:0048646,GO:0048729,GO:0048856,GO:0048872,GO:0048878,GO:0050708,GO:0050714,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051023,GO:0051024,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051156,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051270,GO:0051272,GO:0051336,GO:0051346,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060170,GO:0060255,GO:0060359,GO:0060548,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0071704,GO:0071944,GO:0072330,GO:0072347,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097458,GO:0098588,GO:0098590,GO:0120025,GO:0120038,GO:1901135,GO:1901137,GO:1901214,GO:1901215,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1903530,GO:1903532,GO:1904951,GO:2000116,GO:2000117,GO:2000145,GO:2000147 5.3.1.9 ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 M00001,M00004,M00114 R02739,R02740,R03321 RC00376,RC00563 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MUFP@1224,2KU7B@206389,2VHR9@28216,COG0166@1,COG0166@2 NA|NA|NA G Belongs to the GPI family HGDHCNMN_02968 76114.ebD109 2.3e-33 147.9 Rhodocyclales ftsB GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301,GO:0071944 ko:K05589 ko00000,ko03036 Bacteria 1N7AA@1224,2KX4Q@206389,2VVQJ@28216,COG2919@1,COG2919@2 NA|NA|NA D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic HGDHCNMN_02969 62928.azo2144 6.4e-219 766.5 Rhodocyclales eno GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Bacteria 1MU1N@1224,2KUEC@206389,2VH7Y@28216,COG0148@1,COG0148@2 NA|NA|NA F Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis HGDHCNMN_02970 748247.AZKH_2057 3.9e-140 504.2 Rhodocyclales kdsA 2.5.1.55 ko:K01627 ko00540,ko01100,map00540,map01100 M00063 R03254 RC00435 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1MV91@1224,2KUVF@206389,2VIQF@28216,COG2877@1,COG2877@2 NA|NA|NA M Belongs to the KdsA family HGDHCNMN_02971 62928.azo2146 8.8e-290 1002.3 Rhodocyclales pyrG GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016020,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1276,iECO103_1326.ECO103_3323,iNJ661.Rv1699,iPC815.YPO3377 Bacteria 1MUIT@1224,2KVHT@206389,2VHVA@28216,COG0504@1,COG0504@2 NA|NA|NA F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates HGDHCNMN_02972 1123367.C666_01505 8.3e-59 233.4 Rhodocyclales Bacteria 1MU5N@1224,2KWQ5@206389,2VJPQ@28216,COG1335@1,COG1335@2 NA|NA|NA Q Isochorismatase hydrolase HGDHCNMN_02973 497321.C664_12515 4.8e-298 1030.0 Rhodocyclales acsA 6.2.1.1,6.2.1.16 ko:K01895,ko:K01907 ko00010,ko00280,ko00620,ko00640,ko00650,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00280,map00620,map00640,map00650,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354,R01357 RC00004,RC00012,RC00014,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1MUX7@1224,2KVQH@206389,2VKAN@28216,COG0365@1,COG0365@2 NA|NA|NA I Acetyl-coenzyme A synthetase N-terminus HGDHCNMN_02974 314254.OA2633_14211 2.5e-64 253.4 Alphaproteobacteria Bacteria 1R3X7@1224,2DBH7@1,2U1J4@28211,2Z980@2 NA|NA|NA HGDHCNMN_02975 314265.R2601_13804 9.1e-09 66.6 Alphaproteobacteria Bacteria 1R3X7@1224,2DBH7@1,2U1J4@28211,2Z980@2 NA|NA|NA HGDHCNMN_02976 1547437.LL06_09890 2.5e-27 128.6 Alphaproteobacteria Bacteria 1RH8Y@1224,2U9P4@28211,COG0251@1,COG0251@2 NA|NA|NA J endoribonuclease L-PSP HGDHCNMN_02978 1125973.JNLC01000010_gene1601 1e-124 453.8 Bradyrhizobiaceae bioA2 2.6.1.18 ko:K00822 ko00280,ko00410,ko00640,ko01100,map00280,map00410,map00640,map01100 R00907,R04187 RC00008,RC00062,RC00160 ko00000,ko00001,ko01000,ko01007 Bacteria 1MU2N@1224,2TQND@28211,3JRVX@41294,COG0161@1,COG0161@2 NA|NA|NA E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family HGDHCNMN_02979 62928.azo3362 1.7e-109 402.5 Rhodocyclales garR 1.1.1.31,1.1.1.60 ko:K00020,ko:K00042 ko00280,ko00630,ko01100,map00280,map00630,map01100 R01745,R01747,R05066 RC00099 ko00000,ko00001,ko01000 Bacteria 1MUGU@1224,2KVG1@206389,2VHAW@28216,COG2084@1,COG2084@2 NA|NA|NA I COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases HGDHCNMN_02980 522306.CAP2UW1_2634 1.7e-21 109.4 Betaproteobacteria Bacteria 1N6YX@1224,2WFZ1@28216,COG5608@1,COG5608@2 NA|NA|NA S SMART Water Stress and Hypersensitive response HGDHCNMN_02981 1123367.C666_13010 3.9e-93 347.8 Rhodocyclales azlC Bacteria 1MVGN@1224,2KWFI@206389,2VREP@28216,COG1296@1,COG1296@2 NA|NA|NA E branched-chain amino acid permease (azaleucine resistance) HGDHCNMN_02982 1123367.C666_13005 1e-32 146.0 Rhodocyclales Bacteria 1NH6U@1224,2KXM6@206389,2WB62@28216,COG4392@1,COG4392@2 NA|NA|NA S Branched-chain amino acid transport protein (AzlD) HGDHCNMN_02983 640081.Dsui_2148 5.8e-140 505.4 Rhodocyclales ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU2C@1224,2KW14@206389,2VH3V@28216,COG4564@1,COG4564@2,COG5001@1,COG5001@2 NA|NA|NA T Cache 3/Cache 2 fusion domain HGDHCNMN_02984 640081.Dsui_0777 5.1e-135 487.6 Rhodocyclales ko:K07814 ko00000,ko02022 Bacteria 1MUB8@1224,2KVRV@206389,2VH1F@28216,COG3437@1,COG3437@2 NA|NA|NA T Metal dependent phosphohydrolases with conserved 'HD' motif. HGDHCNMN_02985 1244869.H261_16341 3e-229 802.7 Rhodospirillales 2.7.13.3 ko:K11527 ko00000,ko01000,ko01001,ko02022 Bacteria 1NRP8@1224,2JPEA@204441,2TXJ2@28211,COG0642@1,COG0784@1,COG0784@2,COG2198@1,COG2198@2,COG2202@1,COG2202@2,COG2205@2,COG2770@1,COG2770@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_02986 497321.C664_09360 2.1e-72 278.9 Rhodocyclales fucA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006004,GO:0008150,GO:0008152,GO:0008270,GO:0008738,GO:0009056,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0019317,GO:0019318,GO:0019320,GO:0019321,GO:0019323,GO:0019566,GO:0019568,GO:0019571,GO:0042354,GO:0042355,GO:0043167,GO:0043169,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046372,GO:0046872,GO:0046914,GO:0071704,GO:1901575 4.1.2.17 ko:K01628 ko00051,ko01120,map00051,map01120 R02262 RC00603,RC00604 ko00000,ko00001,ko01000 Bacteria 1MW7B@1224,2KW2V@206389,2VQBC@28216,COG0235@1,COG0235@2 NA|NA|NA G Class II aldolase adducin family protein HGDHCNMN_02987 497321.C664_09365 2.9e-116 425.2 Rhodocyclales mtnA GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 ko:K08963 ko00270,ko01100,map00270,map01100 M00034 R04420 RC01151 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUPM@1224,2KVMX@206389,2VI2X@28216,COG0182@1,COG0182@2 NA|NA|NA J Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) HGDHCNMN_02988 62928.azo3359 6.1e-45 188.3 Rhodocyclales ybdL GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.6.1.17,2.6.1.88 ko:K14267,ko:K14287 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R04475,R08618 RC00006,RC00025 ko00000,ko00001,ko00002,ko01000,ko01007 iNJ661.Rv0858c Bacteria 1MW0Z@1224,2KU6C@206389,2VJD8@28216,COG0436@1,COG0436@2 NA|NA|NA E COG0436 Aspartate tyrosine aromatic aminotransferase HGDHCNMN_02989 305700.B447_07579 1.1e-74 286.2 Rhodocyclales zapD GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044424,GO:0044444,GO:0044464,GO:0051301 ko:K18778 ko00000,ko03036 Bacteria 1MW69@1224,2KUR3@206389,2VIIG@28216,COG4582@1,COG4582@2 NA|NA|NA D Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity HGDHCNMN_02990 1123354.AUDR01000013_gene745 3.2e-16 90.5 Hydrogenophilales yacG GO:0003674,GO:0004857,GO:0005488,GO:0008150,GO:0008270,GO:0008657,GO:0010911,GO:0030234,GO:0032780,GO:0042030,GO:0043086,GO:0043167,GO:0043169,GO:0043462,GO:0044092,GO:0046872,GO:0046914,GO:0050790,GO:0051336,GO:0051346,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0072586,GO:0098772,GO:2000371,GO:2000372 2.7.1.24 ko:K00859,ko:K09862 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 1KRWJ@119069,1NGJ8@1224,2VXRV@28216,COG3024@1,COG3024@2 NA|NA|NA S DNA gyrase inhibitor YacG HGDHCNMN_02991 1123487.KB892868_gene1293 1.6e-118 432.6 Rhodocyclales mutT GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008413,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0030145,GO:0033554,GO:0034641,GO:0035539,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044715,GO:0044716,GO:0046483,GO:0046872,GO:0046914,GO:0047429,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 2.5.1.3,3.6.1.55,3.6.1.65 ko:K00788,ko:K03574,ko:K08320 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000,ko03400 iE2348C_1286.E2348C_0104,iSDY_1059.SDY_0129 Bacteria 1RCZM@1224,2KVDW@206389,2VHTP@28216,COG0352@1,COG0352@2,COG0494@1,COG0494@2 NA|NA|NA HL Belongs to the Nudix hydrolase family HGDHCNMN_02992 76114.ebA4101 3.3e-118 431.4 Rhodocyclales MA20_41470 ko:K06923 ko00000 Bacteria 1MVMX@1224,2KUQI@206389,2VID5@28216,COG2607@1,COG2607@2 NA|NA|NA S ATPase (AAA HGDHCNMN_02994 76114.ebA4100 3.3e-135 488.4 Rhodocyclales mltA GO:0000270,GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016787,GO:0016798,GO:0019867,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044462,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 ko:K08304 ko00000,ko01000,ko01011 GH102 iECABU_c1320.ECABU_c30840 Bacteria 1MXD4@1224,2KV14@206389,2VHBF@28216,COG2821@1,COG2821@2 NA|NA|NA M Membrane-bound lytic murein transglycosylase HGDHCNMN_02995 305700.B447_13969 4.3e-100 371.3 Rhodocyclales Bacteria 1N62A@1224,2M02R@206389,2VUYI@28216,COG2200@1,COG2200@2 NA|NA|NA T EAL domain HGDHCNMN_02996 497321.C664_19456 1.4e-82 312.8 Rhodocyclales dsbC 5.3.4.1 ko:K03981 ko00000,ko01000,ko02044,ko03110 3.A.7.11.1 Bacteria 1RD39@1224,2KW1Z@206389,2VIHV@28216,COG1651@1,COG1651@2 NA|NA|NA O Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process HGDHCNMN_02997 305700.B447_07549 1.1e-148 533.1 Rhodocyclales ubiH ko:K03185 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04989,R08773 RC02670 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU6I@1224,2KUAJ@206389,2VIPS@28216,COG0654@1,COG0654@2 NA|NA|NA C Ubiquinone biosynthesis hydroxylase HGDHCNMN_02998 243365.CV_0283 7.4e-20 104.0 Betaproteobacteria Bacteria 1RHTD@1224,2CESE@1,2VSJ5@28216,32S0D@2 NA|NA|NA S Glycine-zipper domain HGDHCNMN_02999 1123354.AUDR01000012_gene1723 1.3e-12 80.1 Betaproteobacteria Bacteria 1NEU1@1224,2DP14@1,2VWRD@28216,3303I@2 NA|NA|NA HGDHCNMN_03001 522306.CAP2UW1_0580 2.4e-56 224.9 unclassified Betaproteobacteria mraZ GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 ko:K03925 ko00000 Bacteria 1KQYW@119066,1RHCG@1224,2VRGP@28216,COG2001@1,COG2001@2 NA|NA|NA K MraZ protein, putative antitoxin-like HGDHCNMN_03002 62928.azo0876 1e-125 456.4 Rhodocyclales rsmH GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 ko:K03438 ko00000,ko01000,ko03009 Bacteria 1MUT4@1224,2KUQH@206389,2VIYT@28216,COG0275@1,COG0275@2 NA|NA|NA J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA HGDHCNMN_03003 1123367.C666_14695 5e-25 120.2 Rhodocyclales ftsL GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0019954,GO:0022402,GO:0022414,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0043093,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944 ko:K03586 ko00000,ko03036 Bacteria 1N6WK@1224,2KWVG@206389,2VW1W@28216,COG3116@1,COG3116@2 NA|NA|NA D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic HGDHCNMN_03004 62928.azo0878 5.3e-240 837.0 Rhodocyclales ftsI GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 ko:K03587,ko:K08384,ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 iSSON_1240.SSON_0092 Bacteria 1MUNY@1224,2KUNQ@206389,2VIZM@28216,COG0768@1,COG0768@2 NA|NA|NA M Catalyzes cross-linking of the peptidoglycan cell wall at the division septum HGDHCNMN_03005 1123487.KB892864_gene2206 3.2e-161 575.1 Rhodocyclales murE GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 3.4.16.4,6.3.2.10,6.3.2.13 ko:K01928,ko:K03587,ko:K15792 ko00300,ko00550,ko01501,map00300,map00550,map01501 R02788,R04617 RC00064,RC00090,RC00141 ko00000,ko00001,ko01000,ko01011,ko03036 iECO103_1326.ECO103_0087,iECO111_1330.ECO111_0088,iECW_1372.ECW_m0084,iEKO11_1354.EKO11_3829,iWFL_1372.ECW_m0084,ic_1306.c0103 Bacteria 1MU6P@1224,2KUYR@206389,2WGFS@28216,COG0769@1,COG0769@2 NA|NA|NA M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan HGDHCNMN_03006 85643.Tmz1t_3431 4.8e-164 584.3 Rhodocyclales murF GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008766,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0047480,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.10 ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 R04573,R04617 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 iB21_1397.B21_00086,iEC042_1314.EC042_0087,iEC55989_1330.EC55989_0082,iECBD_1354.ECBD_3531,iECB_1328.ECB_00087,iECD_1391.ECD_00087,iECIAI1_1343.ECIAI1_0085,iECO103_1326.ECO103_0088,iECO111_1330.ECO111_0089,iECO26_1355.ECO26_0089,iECSE_1348.ECSE_0088,iECW_1372.ECW_m0085,iEKO11_1354.EKO11_3828,iEcE24377_1341.EcE24377A_0088,iEcHS_1320.EcHS_A0092,iEcolC_1368.EcolC_3571,iSBO_1134.SBO_0074,iSSON_1240.SSON_0094,iSbBS512_1146.SbBS512_E0079,iUMNK88_1353.UMNK88_86,iWFL_1372.ECW_m0085,iYL1228.KPN_00090 Bacteria 1QTSF@1224,2KVHS@206389,2VH2H@28216,COG0770@1,COG0770@2 NA|NA|NA M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein HGDHCNMN_03007 62928.azo3651 1.7e-226 792.3 Rhodocyclales mrcA GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042546,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 1MU5A@1224,2KU7U@206389,2VHXF@28216,COG5009@1,COG5009@2 NA|NA|NA M penicillin-binding protein 1A HGDHCNMN_03008 748247.AZKH_4223 2e-33 148.3 Rhodocyclales cyaY GO:0003674,GO:0003824,GO:0004322,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008198,GO:0008199,GO:0009987,GO:0016043,GO:0016226,GO:0016491,GO:0016530,GO:0016722,GO:0016724,GO:0018282,GO:0018283,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0033554,GO:0034599,GO:0034986,GO:0036211,GO:0042221,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0050896,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071704,GO:0071840,GO:0098771,GO:0140104,GO:1901564 1.16.3.1 ko:K06202,ko:K19054 ko00860,map00860 R00078 RC02758 ko00000,ko00001,ko01000,ko03029 iECW_1372.ECW_m4108,iEKO11_1354.EKO11_4552,iWFL_1372.ECW_m4108 Bacteria 1RH9A@1224,2KWZ7@206389,2VVS3@28216,COG1965@1,COG1965@2 NA|NA|NA P Belongs to the frataxin HGDHCNMN_03010 748247.AZKH_4225 3.5e-177 627.9 Rhodocyclales lysA GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.1.129,3.4.16.4,4.1.1.20 ko:K01586,ko:K05366 ko00300,ko00550,ko01100,ko01110,ko01120,ko01130,ko01230,ko01501,map00300,map00550,map01100,map01110,map01120,map01130,map01230,map01501 M00016,M00525,M00526,M00527 R00451 RC00299 ko00000,ko00001,ko00002,ko01000,ko01003,ko01011 GT51 iLJ478.TM1517 Bacteria 1MUA6@1224,2KVC9@206389,2VI3M@28216,COG0019@1,COG0019@2 NA|NA|NA E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine HGDHCNMN_03011 1123368.AUIS01000007_gene2734 1.2e-77 297.0 Acidithiobacillales Bacteria 1MUFW@1224,1RQJ9@1236,2NCDI@225057,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family HGDHCNMN_03012 1163617.SCD_n00177 0.0 1471.4 Betaproteobacteria acrD4 ko:K03296 ko00000 2.A.6.2 Bacteria 1MU48@1224,2VHFI@28216,COG0841@1,COG0841@2 NA|NA|NA V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family HGDHCNMN_03013 76114.ebA3500 4.6e-154 551.2 Rhodocyclales dnaQ GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0016020,GO:0030312,GO:0032991,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071944,GO:1902494,GO:1905347,GO:1905348,GO:1990391 2.7.7.7 ko:K02342,ko:K03703,ko:K03763,ko:K05984 ko00230,ko00240,ko01100,ko03030,ko03420,ko03430,ko03440,map00230,map00240,map01100,map03030,map03420,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1QUVW@1224,2KZP2@206389,2WGSG@28216,COG0322@1,COG0322@2,COG2176@1,COG2176@2 NA|NA|NA L GIY-YIG catalytic domain HGDHCNMN_03014 62928.azo3950 7.2e-15 85.9 Rhodocyclales Bacteria 1NCEZ@1224,2EPEP@1,2KXP9@206389,2VXCQ@28216,3333Z@2 NA|NA|NA S Protein of unknown function (DUF3460) HGDHCNMN_03015 62928.azo3951 1.9e-280 971.5 Rhodocyclales spoT GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5,3.1.7.2 ko:K00951,ko:K01139 ko00230,map00230 R00336,R00429 RC00002,RC00078 ko00000,ko00001,ko01000,ko03009 iECNA114_1301.ECNA114_3794,iECOK1_1307.ECOK1_4092,iECP_1309.ECP_3748,iECS88_1305.ECS88_4065,iECSF_1327.ECSF_3486,iLF82_1304.LF82_2165,iNRG857_1313.NRG857_18145,iUMN146_1321.UM146_18405,iUTI89_1310.UTI89_C4195,ic_1306.c4475 Bacteria 1MU44@1224,2KVJT@206389,2VIA1@28216,COG0317@1,COG0317@2 NA|NA|NA KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance HGDHCNMN_03016 640081.Dsui_0422 4.5e-18 96.3 Rhodocyclales thiC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 ko:K03147 ko00730,ko01100,map00730,map01100 M00127 R03472 RC03251,RC03252 ko00000,ko00001,ko00002,ko01000 iECABU_c1320.ECABU_c45100 Bacteria 1MUVV@1224,2KV81@206389,2VHS3@28216,COG0422@1,COG0422@2 NA|NA|NA H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction HGDHCNMN_03017 1385515.N791_08715 2.1e-31 142.5 Xanthomonadales fimT ko:K08084 ko00000,ko02044 3.A.15.2 Bacteria 1N7RS@1224,1SCFB@1236,1X7IT@135614,COG4970@1,COG4970@2 NA|NA|NA NU Prepilin HGDHCNMN_03018 1094184.KWO_0104685 8.2e-25 120.2 Bacteria pilV ko:K02671 ko00000,ko02035,ko02044 Bacteria COG4967@1,COG4967@2 NA|NA|NA NU type IV pilus modification protein PilV HGDHCNMN_03019 1304883.KI912532_gene95 4.5e-156 557.4 Rhodocyclales leuC 4.2.1.33,4.2.1.35 ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170 RC00497,RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1MVYR@1224,2KVD8@206389,2VHSH@28216,COG0065@1,COG0065@2 NA|NA|NA E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate HGDHCNMN_03020 640081.Dsui_3200 1.2e-07 61.2 Bacteria ecnB GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K16347,ko:K16348 ko00000,ko02000 9.B.13.1.1 Bacteria COG5510@1,COG5510@2 NA|NA|NA S response to toxic substance HGDHCNMN_03021 1123367.C666_02870 1.5e-104 385.6 Rhodocyclales leuD 4.2.1.33,4.2.1.35 ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R10170 RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1MVXB@1224,2KUET@206389,2VIJC@28216,COG0066@1,COG0066@2 NA|NA|NA E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate HGDHCNMN_03022 159087.Daro_0864 3.5e-162 577.8 Rhodocyclales leuB GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030145,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034198,GO:0042594,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0071496,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1990928 1.1.1.85 ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R00994,R04426,R10052 RC00084,RC00417,RC03036 br01601,ko00000,ko00001,ko00002,ko01000 iECs_1301.ECs0077,iYL1228.KPN_00079,iZ_1308.Z0082 Bacteria 1MUH4@1224,2KUDP@206389,2VH2M@28216,COG0473@1,COG0473@2 NA|NA|NA CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate HGDHCNMN_03023 748280.NH8B_1494 7.9e-173 613.2 Neisseriales asd GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009090,GO:0009092,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0033554,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R02291 RC00684 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_3527 Bacteria 1MUHG@1224,2KPMB@206351,2VH2N@28216,COG0136@1,COG0136@2 NA|NA|NA E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate HGDHCNMN_03025 1304883.KI912532_gene1826 8.9e-304 1048.9 Rhodocyclales exaA 1.1.2.8 ko:K00114 ko00010,ko00625,ko01100,ko01110,ko01120,ko01130,map00010,map00625,map01100,map01110,map01120,map01130 R05062,R05198,R05285 RC00087,RC00088,RC01039 ko00000,ko00001,ko01000 Bacteria 1MUQX@1224,2KUHI@206389,2VHVH@28216,COG4993@1,COG4993@2 NA|NA|NA G PQQ-like domain HGDHCNMN_03026 85643.Tmz1t_2818 4.2e-80 304.7 Rhodocyclales ko:K17226 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 Bacteria 1RBHP@1224,2KXWM@206389,2VR7Y@28216,COG5501@1,COG5501@2 NA|NA|NA S Sulphur oxidation protein SoxZ HGDHCNMN_03027 62928.azo2977 1e-96 360.1 Rhodocyclales ko:K01138 ko00000,ko01000 Bacteria 1MX4H@1224,2KXKA@206389,2VN1Z@28216,COG0491@1,COG0491@2 NA|NA|NA S COG0491 Zn-dependent hydrolases, including glyoxylases HGDHCNMN_03028 159087.Daro_1027 6.2e-26 124.8 Rhodocyclales ko:K03832 ko00000,ko02000 2.C.1.1 Bacteria 1PE9F@1224,2KZIF@206389,2VXP2@28216,COG0810@1,COG0810@2 NA|NA|NA M Gram-negative bacterial TonB protein C-terminal HGDHCNMN_03029 159087.Daro_1029 2.7e-96 359.4 Rhodocyclales 2.7.13.3 ko:K03406,ko:K07675,ko:K15011,ko:K21696 ko02020,ko02030,map02020,map02030 M00473,M00523 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035,ko03000 Bacteria 1MWPN@1224,2KWFW@206389,2VNHG@28216,COG4585@1,COG4585@2,COG5000@1,COG5000@2 NA|NA|NA T Histidine kinase HGDHCNMN_03030 62928.azo2980 6.9e-65 253.8 Rhodocyclales uvrY ko:K02282,ko:K07689 ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111 M00475 ko00000,ko00001,ko00002,ko02022,ko02035,ko02044 Bacteria 1MWGM@1224,2KW7F@206389,2VQ32@28216,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon HGDHCNMN_03031 420662.Mpe_A2419 4.2e-33 147.9 Betaproteobacteria ko:K16260 ko00680,ko01120,map00680,map01120 ko00000,ko00001 Bacteria 1N3GA@1224,2WFY4@28216,COG3832@1,COG3832@2 NA|NA|NA S Polyketide cyclase / dehydrase and lipid transport HGDHCNMN_03032 1000565.METUNv1_02807 5.2e-258 897.1 Rhodocyclales nosR ko:K19339 ko00000,ko03000 Bacteria 1MY5M@1224,2KXJC@206389,2VH7V@28216,COG0348@1,COG0348@2,COG3901@1,COG3901@2 NA|NA|NA C 4Fe-4S binding domain HGDHCNMN_03033 1304883.KI912532_gene206 4.9e-91 341.3 Rhodocyclales ko:K02238,ko:K06889 M00429 ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 Bacteria 1MY4C@1224,2KUPJ@206389,2WEH2@28216,COG1073@1,COG1073@2 NA|NA|NA S BAAT Acyl-CoA thioester hydrolase HGDHCNMN_03034 748247.AZKH_1173 5.4e-56 223.8 Rhodocyclales phaJ GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0022607,GO:0042620,GO:0042621,GO:0043933,GO:0044085,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901576 2.3.1.8,4.2.1.55 ko:K00625,ko:K17865 ko00430,ko00620,ko00630,ko00640,ko00650,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00630,map00640,map00650,map00680,map00720,map01100,map01120,map01200 M00357,M00373,M00579 R00230,R00921,R03027 RC00004,RC00831,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWPK@1224,2KWED@206389,2VREB@28216,COG2030@1,COG2030@2 NA|NA|NA I N-terminal half of MaoC dehydratase HGDHCNMN_03035 748247.AZKH_4582 4.1e-99 367.5 Rhodocyclales ureG ko:K03189,ko:K04652 ko00000,ko03110 Bacteria 1MVBD@1224,2KUEE@206389,2VH2U@28216,COG0378@1,COG0378@2 NA|NA|NA KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG HGDHCNMN_03036 1097668.BYI23_B010030 3.3e-40 172.9 Burkholderiaceae ko:K07001 ko00000 Bacteria 1K4JP@119060,1MVHW@1224,2VH3I@28216,COG1752@1,COG1752@2 NA|NA|NA S hydrolase HGDHCNMN_03037 62928.azo3502 1.5e-78 299.3 Rhodocyclales ureF ko:K03188 ko00000 Bacteria 1MW8Q@1224,2KV9Q@206389,2VRF6@28216,COG0830@1,COG0830@2 NA|NA|NA O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter HGDHCNMN_03038 62928.azo3503 1.4e-54 219.2 Rhodocyclales ureE ko:K03187 ko00000 Bacteria 1MZQZ@1224,2KWN7@206389,2VMRF@28216,COG2371@1,COG2371@2 NA|NA|NA O Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly HGDHCNMN_03039 582744.Msip34_0705 3.1e-224 784.3 Nitrosomonadales ureC 3.5.1.5 ko:K01428 ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120 R00131 RC02798,RC02806 ko00000,ko00001,ko01000 iJN746.PP_2845 Bacteria 1MU5P@1224,2KMBT@206350,2VJYX@28216,COG0804@1,COG0804@2 NA|NA|NA E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family HGDHCNMN_03040 626887.J057_17090 2e-36 159.8 Alteromonadaceae mrpA GO:0003674,GO:0005215,GO:0005451,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015491,GO:0015672,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0035725,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0098655,GO:0098660,GO:0098662,GO:0099516,GO:1902600 1.6.5.3 ko:K00341,ko:K05559,ko:K05565,ko:K05566 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000,ko02000 2.A.63.1,2.A.63.2,3.D.1 iSB619.SA_RS04630 Bacteria 1MW2M@1224,1RNKN@1236,463YS@72275,COG1009@1,COG1009@2,COG2111@1,COG2111@2 NA|NA|NA CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit HGDHCNMN_03041 338963.Pcar_2621 3e-27 128.3 Proteobacteria ko:K05559,ko:K05565,ko:K05566 ko00000,ko02000 2.A.63.1,2.A.63.2 Bacteria 1REGG@1224,COG2111@1,COG2111@2 NA|NA|NA P Na H antiporter, MnhB HGDHCNMN_03042 1123253.AUBD01000001_gene1817 2.5e-20 105.1 Xanthomonadales mrpC ko:K05567 ko00000,ko02000 2.A.63.1,2.A.63.2 Bacteria 1RHXT@1224,1S6C0@1236,1XCS3@135614,COG1006@1,COG1006@2 NA|NA|NA P NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HGDHCNMN_03043 1123253.AUBD01000001_gene1818 7.5e-123 447.6 Xanthomonadales mrpD GO:0003674,GO:0005215,GO:0005451,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015491,GO:0015672,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0035725,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0098655,GO:0098660,GO:0098662,GO:0099516,GO:1902600 ko:K05568 ko00000,ko02000 2.A.63.1,2.A.63.2 iSB619.SA_RS04615 Bacteria 1MURB@1224,1RQBG@1236,1X5EC@135614,COG0651@1,COG0651@2 NA|NA|NA CP Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter MnhD subunit HGDHCNMN_03044 1123253.AUBD01000001_gene1819 7.7e-15 86.7 Bacteria mrpE ko:K05562,ko:K05569 ko00000,ko02000 2.A.63.1,2.A.63.2 Bacteria COG1863@1,COG1863@2 NA|NA|NA P multisubunit Na H antiporter MnhE subunit HGDHCNMN_03045 338963.Pcar_2617 9.5e-13 79.3 Bacteria ko:K05570 ko00000,ko02000 2.A.63.1,2.A.63.2 Bacteria COG2212@1,COG2212@2 NA|NA|NA P antiporter activity HGDHCNMN_03046 1123253.AUBD01000001_gene1821 1.1e-14 85.9 Gammaproteobacteria mrpG ko:K05571 ko00000,ko02000 2.A.63.1,2.A.63.2 Bacteria 1RH17@1224,1S6Q4@1236,COG1320@1,COG1320@2 NA|NA|NA P Na H antiporter HGDHCNMN_03047 62928.azo3178 8.8e-99 366.7 Rhodocyclales Bacteria 1RCQC@1224,2KW8K@206389,2VQCR@28216,COG3916@1,COG3916@2 NA|NA|NA QT Acetyltransferase (GNAT) domain HGDHCNMN_03048 76114.ebA7215 1.4e-124 452.6 Rhodocyclales moeW Bacteria 1QUMS@1224,2KUIK@206389,2VN2Y@28216,COG0476@1,COG0476@2 NA|NA|NA H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 HGDHCNMN_03049 76114.ebA7214 6.7e-129 467.2 Rhodocyclales ko:K02453 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1PDX3@1224,2KUNZ@206389,2VNSD@28216,COG0778@1,COG0778@2 NA|NA|NA C Nitroreductase family HGDHCNMN_03050 596153.Alide_2701 1.7e-86 326.2 Comamonadaceae czcD ko:K16264 ko00000,ko02000 2.A.4.1 Bacteria 1MVQB@1224,2VMHH@28216,4ADY8@80864,COG1230@1,COG1230@2 NA|NA|NA P TIGRFAM cation diffusion facilitator family transporter HGDHCNMN_03051 41431.PCC8801_0566 1e-23 118.2 Bacteria fhaA GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 ko:K02283 ko00000,ko02035,ko02044 Bacteria COG1716@1,COG1716@2 NA|NA|NA T histone H2A K63-linked ubiquitination HGDHCNMN_03052 159087.Daro_2879 1.9e-56 225.3 Rhodocyclales yaiI ko:K09768 ko00000 Bacteria 1RCZA@1224,2KWM5@206389,2VRAZ@28216,COG1671@1,COG1671@2 NA|NA|NA S Belongs to the UPF0178 family HGDHCNMN_03053 1304883.KI912532_gene2945 2.7e-93 348.6 Rhodocyclales frdC ko:K00246 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 M00009,M00011,M00150,M00173 R02164 RC00045 ko00000,ko00001,ko00002 Bacteria 1RB22@1224,2KYHM@206389,2VURZ@28216,2ZBTX@2,COG2009@1 NA|NA|NA C Succinate dehydrogenase/Fumarate reductase transmembrane subunit HGDHCNMN_03054 1304883.KI912532_gene2946 3.9e-292 1010.4 Rhodocyclales frdA 1.3.5.1,1.3.5.4 ko:K00239,ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,ko05134,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020,map05134 M00009,M00011,M00149,M00150,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU5M@1224,2KXVT@206389,2VHM6@28216,COG1053@1,COG1053@2 NA|NA|NA C Fumarate reductase flavoprotein C-term HGDHCNMN_03056 159087.Daro_1776 3.5e-105 387.9 Rhodocyclales frdB 1.3.5.4 ko:K00245 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 M00009,M00011,M00150,M00173 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 iIT341.HP0191 Bacteria 1MVHS@1224,2KY25@206389,2VIKC@28216,COG0479@1,COG0479@2 NA|NA|NA C 2Fe-2S iron-sulfur cluster binding domain HGDHCNMN_03057 305700.B447_08343 1.9e-129 468.8 Rhodocyclales ko:K07506 ko00000,ko03000 Bacteria 1MXZQ@1224,2KX7A@206389,2WHBR@28216,COG4977@1,COG4977@2 NA|NA|NA K helix_turn_helix, arabinose operon control protein HGDHCNMN_03059 305700.B447_08338 2.2e-177 628.2 Rhodocyclales metXA 2.3.1.31 ko:K00641 ko00270,ko01100,ko01130,map00270,map01100,map01130 R01776 RC00004,RC00041 ko00000,ko00001,ko01000 Bacteria 1MVJV@1224,2KXRU@206389,2VKXC@28216,COG2021@1,COG2021@2 NA|NA|NA E alpha/beta hydrolase fold HGDHCNMN_03060 305700.B447_08333 1.5e-101 375.9 Rhodocyclales Bacteria 1MUFX@1224,2KYTI@206389,2VQK3@28216,COG1028@1,COG1028@2 NA|NA|NA IQ Short-chain dehydrogenase reductase (SDR) HGDHCNMN_03061 305700.B447_08328 2.1e-275 954.5 Rhodocyclales 1.14.13.226 ko:K18371 ko00640,map00640 R10704 RC03250 ko00000,ko00001,ko01000 Bacteria 1MUQH@1224,2KYAN@206389,2VHFH@28216,COG2072@1,COG2072@2 NA|NA|NA C Flavin-binding monooxygenase-like HGDHCNMN_03062 305700.B447_08323 3.8e-101 374.8 Betaproteobacteria qbdB2 Bacteria 1R58D@1224,2VJ1G@28216,COG4313@1,COG4313@2 NA|NA|NA C Putative MetA-pathway of phenol degradation HGDHCNMN_03063 1123487.KB892865_gene1415 2.9e-112 411.8 Rhodocyclales hsdS 2.1.1.72,3.1.21.3 ko:K01154,ko:K03427 ko00000,ko01000,ko02048 Bacteria 1MXSQ@1224,2KYXJ@206389,2WA1V@28216,COG0732@1,COG0732@2 NA|NA|NA V Type I restriction modification DNA specificity domain HGDHCNMN_03064 313628.LNTAR_06194 3.9e-28 131.7 Bacteria Bacteria COG4185@1,COG4185@2 NA|NA|NA HGDHCNMN_03066 522306.CAP2UW1_1871 0.0 1749.6 unclassified Betaproteobacteria hsdR 3.1.21.3 ko:K01153 ko00000,ko01000,ko02048 Bacteria 1KQKX@119066,1MU96@1224,2VHIR@28216,COG0610@1,COG0610@2 NA|NA|NA F Subunit R is required for both nuclease and ATPase activities, but not for modification HGDHCNMN_03067 748247.AZKH_p0625 4.6e-188 664.1 Rhodocyclales hflX GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 ko:K03665 ko00000,ko03009 Bacteria 1MUA0@1224,2KVJF@206389,2VHVU@28216,COG2262@1,COG2262@2 NA|NA|NA S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis HGDHCNMN_03068 292564.Cyagr_2024 3.4e-77 295.0 Bacteria ko:K07052 ko00000 Bacteria COG1266@1,COG1266@2 NA|NA|NA V CAAX protease self-immunity HGDHCNMN_03069 883126.HMPREF9710_02892 8.5e-56 223.0 Betaproteobacteria yjbQ Bacteria 1RH13@1224,2VT5I@28216,COG0432@1,COG0432@2 NA|NA|NA S Uncharacterised protein family UPF0047 HGDHCNMN_03072 85643.Tmz1t_2918 2.5e-65 255.4 Rhodocyclales flgH GO:0003674,GO:0005198,GO:0005575,GO:0005623,GO:0009288,GO:0009425,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464 ko:K01991,ko:K02393 ko02026,ko02040,map02026,map02040 ko00000,ko00001,ko02000,ko02035 1.B.18 Bacteria 1RDEY@1224,2KWEC@206389,2VRIC@28216,COG2063@1,COG2063@2 NA|NA|NA N Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation HGDHCNMN_03073 159087.Daro_0754 5.4e-112 410.6 Rhodocyclales flgG GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009279,GO:0009288,GO:0009424,GO:0009425,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044462,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071944,GO:0071973,GO:0071978,GO:0097588 ko:K02392 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MVMA@1224,2KVFS@206389,2VH7A@28216,COG4786@1,COG4786@2 NA|NA|NA N Belongs to the flagella basal body rod proteins family HGDHCNMN_03074 748247.AZKH_1310 8.8e-88 330.1 Rhodocyclales flgF GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009425,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02391 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1NZWQ@1224,2KUHU@206389,2VISC@28216,COG4787@1,COG4787@2 NA|NA|NA N basal body rod protein HGDHCNMN_03075 1000565.METUNv1_02644 1.6e-88 334.0 Rhodocyclales flgE GO:0001539,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044424,GO:0044444,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02390 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MU5J@1224,2KVFK@206389,2VIV1@28216,COG1749@1,COG1749@2 NA|NA|NA N Flagellar hook protein FlgE HGDHCNMN_03076 748247.AZKH_1308 8.2e-48 197.2 Rhodocyclales flgD GO:0001539,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044424,GO:0044444,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02389,ko:K02390 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MXCG@1224,2KWMP@206389,2VSF6@28216,COG1843@1,COG1843@2 NA|NA|NA N Required for flagellar hook formation. May act as a scaffolding protein HGDHCNMN_03077 85643.Tmz1t_2923 3.8e-48 197.6 Rhodocyclales flgC GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009425,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02388 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1RHI3@1224,2KWN2@206389,2VSK1@28216,COG1558@1,COG1558@2 NA|NA|NA N Belongs to the flagella basal body rod proteins family HGDHCNMN_03078 62928.azo2740 8.9e-42 176.4 Rhodocyclales flgB GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02387 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MZ8P@1224,2KWX8@206389,2VUJ4@28216,COG1815@1,COG1815@2 NA|NA|NA N Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body HGDHCNMN_03079 62928.azo2741 1.1e-47 196.8 Rhodocyclales flgA GO:0001539,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 ko:K02279,ko:K02386 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 Bacteria 1N1SA@1224,2KWP8@206389,2VR6V@28216,COG1261@1,COG1261@2 NA|NA|NA N Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly HGDHCNMN_03080 62928.azo2742 6.4e-16 90.1 Rhodocyclales flgM GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0009892,GO:0010556,GO:0010605,GO:0016989,GO:0019219,GO:0019222,GO:0030162,GO:0031323,GO:0031324,GO:0031326,GO:0032268,GO:0032269,GO:0045861,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 ko:K02398 ko02020,ko02025,ko02026,ko02040,map02020,map02025,map02026,map02040 ko00000,ko00001,ko02035 Bacteria 1NGJA@1224,2KXGB@206389,2VWP5@28216,COG2747@1,COG2747@2 NA|NA|NA N negative regulator of flagellin synthesis HGDHCNMN_03081 62928.azo2743 5.2e-33 147.5 Rhodocyclales flgN ko:K02399 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1NGUP@1224,2KXI1@206389,2VXS1@28216,COG3418@1,COG3418@2 NA|NA|NA N FlgN protein HGDHCNMN_03082 62928.azo1110 6.4e-90 337.4 Rhodocyclales motB ko:K02557 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02000,ko02035 1.A.30.1 Bacteria 1MU4S@1224,2KV6P@206389,2VKC4@28216,COG1360@1,COG1360@2 NA|NA|NA N Flagellar motor protein HGDHCNMN_03083 748247.AZKH_3508 6.3e-102 377.1 Rhodocyclales motC ko:K02556 ko02020,ko02030,ko02040,map02020,map02030,map02040 ko00000,ko00001,ko02000,ko02035 1.A.30.1 Bacteria 1MXK3@1224,2KV2Y@206389,2VNCG@28216,COG1291@1,COG1291@2 NA|NA|NA N flagellar motor HGDHCNMN_03084 1123487.KB892864_gene2084 1.3e-105 389.4 Rhodocyclales fliA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K02405 ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111 ko00000,ko00001,ko02035,ko03021 Bacteria 1MWEU@1224,2KUVX@206389,2VHR3@28216,COG1191@1,COG1191@2 NA|NA|NA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes HGDHCNMN_03085 62928.azo1106 2.4e-43 182.6 Rhodocyclales flhG ko:K04562 ko00000,ko02035 Bacteria 1PUTB@1224,2KXND@206389,2VY17@28216,COG0455@1,COG0455@2 NA|NA|NA N bacterial-type flagellum organization HGDHCNMN_03086 748247.AZKH_3511 6.2e-136 491.1 Rhodocyclales flhF ko:K02404 ko00000,ko02035 Bacteria 1MUQW@1224,2KV50@206389,2VHVZ@28216,COG1419@1,COG1419@2 NA|NA|NA N Flagellar biosynthesis regulator FlhF HGDHCNMN_03087 85643.Tmz1t_2937 8.6e-306 1055.8 Rhodocyclales flhA GO:0005575,GO:0005623,GO:0005886,GO:0006996,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0044085,GO:0044464,GO:0044780,GO:0044781,GO:0070925,GO:0071840,GO:0071944 ko:K02400 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2,3.A.6.3 Bacteria 1MUF3@1224,2KUWV@206389,2VHVC@28216,COG1298@1,COG1298@2 NA|NA|NA N Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin HGDHCNMN_03088 62928.azo1103 8.8e-127 460.3 Rhodocyclales flhB GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02401,ko:K02556,ko:K03229,ko:K04061,ko:K13820 ko02020,ko02030,ko02040,ko03070,map02020,map02030,map02040,map03070 M00332,M00542,M00660 ko00000,ko00001,ko00002,ko02000,ko02035,ko02044 1.A.30.1,3.A.6.1,3.A.6.2,3.A.6.3 Bacteria 1MUWI@1224,2KVJ0@206389,2VIH0@28216,COG1377@1,COG1377@2 NA|NA|NA N Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin HGDHCNMN_03089 1000565.METUNv1_02624 5e-13 80.5 Rhodocyclales Bacteria 1PVKM@1224,2DTN8@1,2KXJM@206389,2VYTX@28216,33M1H@2 NA|NA|NA S Protein of unknown function (DUF3135) HGDHCNMN_03090 62928.azo1462 1.6e-274 951.8 Rhodocyclales cheA GO:0003674,GO:0005488,GO:0005515,GO:0019904 2.7.13.3 ko:K02487,ko:K03407,ko:K06596 ko02020,ko02025,ko02030,map02020,map02025,map02030 M00506,M00507 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 Bacteria 1MUAG@1224,2KV2C@206389,2VI5B@28216,COG0643@1,COG0643@2,COG2198@1,COG2198@2 NA|NA|NA NT COG0643 Chemotaxis protein histidine kinase and related kinases HGDHCNMN_03091 62928.azo1461 3.3e-78 298.5 Rhodocyclales cheZ ko:K03414 ko02030,map02030 ko00000,ko00001,ko02035 Bacteria 1NIV6@1224,2KUP2@206389,2VN5G@28216,COG3143@1,COG3143@2 NA|NA|NA NT Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) HGDHCNMN_03092 62928.azo1460 6e-59 233.4 Rhodocyclales Bacteria 1RDNP@1224,2KWC5@206389,2VR8X@28216,COG0745@1,COG0745@2 NA|NA|NA T response regulator HGDHCNMN_03093 62928.azo1459 1.3e-139 502.7 Rhodocyclales cheV 2.7.13.3 ko:K02659,ko:K03407,ko:K03408,ko:K03415 ko02020,ko02025,ko02030,map02020,map02025,map02030 M00506 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035,ko02044 Bacteria 1N81M@1224,2KV3U@206389,2VI4E@28216,COG0784@1,COG0784@2,COG0835@1,COG0835@2 NA|NA|NA T Chemotaxis signal transduction protein HGDHCNMN_03094 62928.azo1458 7.6e-148 530.0 Rhodocyclales cheV 2.7.13.3 ko:K02659,ko:K03407,ko:K03408,ko:K03415 ko02020,ko02025,ko02030,map02020,map02025,map02030 M00506 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035,ko02044 Bacteria 1N81M@1224,2KVCH@206389,2VI4E@28216,COG0784@1,COG0784@2,COG0835@1,COG0835@2 NA|NA|NA T Chemotaxis signal transduction protein HGDHCNMN_03095 572477.Alvin_1369 1.2e-169 603.2 Chromatiales MA20_17940 ko:K02044,ko:K02660,ko:K03406,ko:K05875 ko02010,ko02020,ko02025,ko02030,map02010,map02020,map02025,map02030 M00223 ko00000,ko00001,ko00002,ko02000,ko02035,ko02044 3.A.1.9 Bacteria 1NJXF@1224,1RQXQ@1236,1WWUC@135613,COG0840@1,COG0840@2 NA|NA|NA NT chemotaxis HGDHCNMN_03096 640081.Dsui_1715 1.4e-120 440.3 Rhodocyclales rsbP 3.1.3.3,4.6.1.1 ko:K01768,ko:K07315,ko:K20977 ko00230,ko02020,ko02025,ko04113,ko04213,map00230,map02020,map02025,map04113,map04213 M00695,M00820 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko02022,ko03021 Bacteria 1N4K5@1224,2KVU6@206389,2VKGP@28216,COG2199@1,COG2208@1,COG2208@2,COG3706@2 NA|NA|NA T Sigma factor PP2C-like phosphatases HGDHCNMN_03097 1123487.KB892836_gene3258 1.2e-27 129.0 Rhodocyclales spoIIAA ko:K04749,ko:K20978 ko02020,ko02025,map02020,map02025 ko00000,ko00001,ko03021 Bacteria 1MZ5N@1224,2KX88@206389,2VWS3@28216,COG1366@1,COG1366@2 NA|NA|NA T STAS domain HGDHCNMN_03098 1123487.KB892836_gene3259 6.2e-114 417.5 Rhodocyclales cheB 3.1.1.61,3.5.1.44 ko:K03412 ko02020,ko02030,map02020,map02030 M00506 ko00000,ko00001,ko00002,ko01000,ko02022,ko02035 Bacteria 1MWCN@1224,2KUJP@206389,2VI13@28216,COG2201@1,COG2201@2 NA|NA|NA NT catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR HGDHCNMN_03099 640081.Dsui_1712 1.9e-75 288.9 Rhodocyclales cheD 3.1.1.61,3.5.1.44 ko:K03411,ko:K03412 ko02020,ko02030,map02020,map02030 M00506 ko00000,ko00001,ko00002,ko01000,ko02022,ko02035 Bacteria 1RDDB@1224,2KUYV@206389,2VJ1T@28216,COG1871@1,COG1871@2 NA|NA|NA NT Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis HGDHCNMN_03100 748247.AZKH_3271 1.6e-110 406.0 Rhodocyclales cheR GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0050896 2.1.1.80 ko:K00575 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko01000,ko02035 Bacteria 1MU6W@1224,2KVRQ@206389,2VKFS@28216,COG1352@1,COG1352@2 NA|NA|NA H Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP HGDHCNMN_03101 1304883.KI912532_gene178 2.5e-202 712.6 Rhodocyclales aer ko:K03406,ko:K03776,ko:K05874 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2KU84@206389,2VGZ8@28216,COG0840@1,COG0840@2,COG3829@1,COG3829@2,COG5000@1,COG5000@2 NA|NA|NA T Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). HGDHCNMN_03102 1437824.BN940_10856 5e-93 348.6 Alcaligenaceae ybhF ko:K01990,ko:K01992,ko:K13926 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MUX3@1224,2VHRB@28216,3T9JA@506,COG1131@1,COG1131@2 NA|NA|NA V AAA domain, putative AbiEii toxin, Type IV TA system HGDHCNMN_03103 748247.AZKH_4546 5.9e-105 387.1 Rhodocyclales smuG ko:K10800 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1PIX8@1224,2KU6J@206389,2VKZ8@28216,COG1573@1,COG1573@2 NA|NA|NA L PFAM Uracil-DNA glycosylase superfamily HGDHCNMN_03104 1123487.KB892868_gene1157 4.1e-186 657.5 Rhodocyclales ampG GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015835,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1901264,GO:1902600 ko:K08218 ko01501,map01501 M00628 ko00000,ko00001,ko00002,ko02000 2.A.1.25 Bacteria 1MUZ8@1224,2KVCT@206389,2VI8P@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HGDHCNMN_03105 305700.B447_02196 7.6e-33 146.4 Rhodocyclales Bacteria 1NCEP@1224,2E4QE@1,2KX56@206389,2VU6H@28216,32ZIZ@2 NA|NA|NA HGDHCNMN_03106 76114.ebD26 1.4e-52 212.6 Betaproteobacteria ste14 Bacteria 1QVIW@1224,2VX8F@28216,COG2020@1,COG2020@2 NA|NA|NA O 3-oxo-5-alpha-steroid 4-dehydrogenase HGDHCNMN_03107 1000565.METUNv1_00649 1.5e-103 382.9 Rhodocyclales Bacteria 1MVWM@1224,2KYJZ@206389,2VNDI@28216,COG2199@1,COG3706@2 NA|NA|NA T diguanylate cyclase HGDHCNMN_03108 748247.AZKH_1712 1.3e-68 266.2 Rhodocyclales norE 1.9.3.1 ko:K02164,ko:K02276 ko00190,ko01100,map00190,map01100 M00155 R00081,R00294 RC00016,RC02794 ko00000,ko00001,ko00002,ko01000 3.D.4.10,3.D.4.4,3.D.4.6 Bacteria 1MUCK@1224,2KVSD@206389,2VPW8@28216,COG1845@1,COG1845@2 NA|NA|NA C Heme copper-type cytochrome quinol oxidase, subunit 3 HGDHCNMN_03110 76114.ebA183 6.1e-119 433.7 Rhodocyclales norQ ko:K04748 R00294 RC02794 ko00000 3.D.4.10 Bacteria 1MXIW@1224,2KUMP@206389,2VHWI@28216,COG0714@1,COG0714@2 NA|NA|NA S COG0714 MoxR-like ATPases HGDHCNMN_03111 159087.Daro_0821 5.3e-97 360.9 Rhodocyclales Bacteria 1R9BR@1224,2KYZT@206389,2VPTQ@28216,COG5549@1,COG5549@2 NA|NA|NA O Zinc-dependent metalloprotease HGDHCNMN_03112 290317.Cpha266_0939 1.6e-290 1005.4 Bacteria 2.1.1.72 ko:K07316 ko00000,ko01000,ko02048 Bacteria COG2189@1,COG2189@2 NA|NA|NA L Belongs to the N(4) N(6)-methyltransferase family HGDHCNMN_03113 1121035.AUCH01000002_gene1581 2e-33 148.7 Rhodocyclales vapC ko:K18828 ko00000,ko01000,ko02048,ko03016 Bacteria 1MZB6@1224,2M02Q@206389,2VWH6@28216,COG1487@1,COG1487@2 NA|NA|NA S Large family of predicted nucleotide-binding domains HGDHCNMN_03114 331678.Cphamn1_2421 0.0 1095.9 Bacteria 3.1.21.5 ko:K01156 ko00000,ko01000,ko02048 Bacteria COG3587@1,COG3587@2 NA|NA|NA L Type III restriction enzyme, res subunit HGDHCNMN_03115 748247.AZKH_4385 0.0 2065.0 Rhodocyclales metH GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 iECO103_1326.ECO103_4764,iECUMN_1333.ECUMN_4545 Bacteria 1MV6G@1224,2KUFA@206389,2VHYQ@28216,COG0646@1,COG0646@2,COG1410@1,COG1410@2 NA|NA|NA H methionine synthase HGDHCNMN_03116 62928.azo1065 2.3e-16 91.3 Rhodocyclales Bacteria 1ND3F@1224,2EBGE@1,2KZD1@206389,2VVY6@28216,335H0@2 NA|NA|NA S Oxidoreductase-like protein, N-terminal HGDHCNMN_03117 1123519.PSJM300_03005 1.8e-21 110.2 Pseudomonas stutzeri group Bacteria 1NBFY@1224,1SMM2@1236,1Z0VS@136846,COG3152@1,COG3152@2 NA|NA|NA S membrane HGDHCNMN_03118 522306.CAP2UW1_2800 4.9e-135 488.0 Betaproteobacteria GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0009987,GO:0030312,GO:0044464,GO:0044764,GO:0046812,GO:0051704,GO:0071944 ko:K07028 ko00000 Bacteria 1MU9M@1224,2VJUR@28216,COG0645@1,COG0645@2,COG2187@1,COG2187@2 NA|NA|NA S AAA domain HGDHCNMN_03119 358220.C380_01675 9.9e-09 66.2 Comamonadaceae Bacteria 1NG92@1224,2EMB8@1,2VXTV@28216,33F08@2,4AFW2@80864 NA|NA|NA HGDHCNMN_03120 497321.C664_06723 4.4e-234 817.0 Rhodocyclales norB GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016661,GO:0016662,GO:0016966,GO:0055114 1.7.2.5 ko:K04561 ko00910,ko01120,map00910,map01120 M00529 R00294 RC02794 ko00000,ko00001,ko00002,ko01000 3.D.4.10 Bacteria 1MVT1@1224,2KUBH@206389,2VHXU@28216,COG3256@1,COG3256@2 NA|NA|NA C to the heme-copper respiratory oxidase family HGDHCNMN_03121 640081.Dsui_3109 7.1e-66 256.5 Rhodocyclales norC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02305 ko00910,ko01120,map00910,map01120 M00529 R00294 RC02794 ko00000,ko00001,ko00002 3.D.4.10 Bacteria 1RDSI@1224,2KW5Y@206389,2VQ50@28216,COG2010@1,COG2010@2 NA|NA|NA C Cytochrome c HGDHCNMN_03122 640081.Dsui_1554 2.6e-142 512.7 Rhodocyclales 2.7.13.3 ko:K20974 ko02020,ko02025,map02020,map02025 M00820 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1NRP8@1224,2KVXP@206389,2VGZQ@28216,COG0642@1,COG0784@1,COG0784@2,COG2205@2,COG5002@1,COG5002@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_03123 748247.AZKH_0309 1.5e-78 299.3 Rhodocyclales torC ko:K02569,ko:K03532 ko02020,map02020 ko00000,ko00001,ko02000 5.A.3.4 Bacteria 1MWV2@1224,2KV5G@206389,2VMSB@28216,COG3005@1,COG3005@2 NA|NA|NA C cytochrome c-type protein HGDHCNMN_03124 1121035.AUCH01000002_gene1468 3e-44 184.9 Rhodocyclales napB ko:K02568 ko00910,ko01120,map00910,map01120 M00529,M00530 R00798 RC02812 ko00000,ko00001,ko00002 Bacteria 1RHGD@1224,2KXA1@206389,2VTPE@28216,COG3043@1,COG3043@2 NA|NA|NA C Electron transfer subunit of the periplasmic nitrate reductase complex NapAB HGDHCNMN_03125 1121035.AUCH01000002_gene1469 1.8e-119 435.6 Rhodocyclales napH GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02574 ko00000 iEcSMS35_1347.EcSMS35_2352 Bacteria 1MWR5@1224,2KUNK@206389,2VJYI@28216,COG0348@1,COG0348@2 NA|NA|NA C 4Fe-4S binding domain HGDHCNMN_03126 1121035.AUCH01000002_gene1470 5.2e-114 417.5 Rhodocyclales napG GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02573 ko00000 Bacteria 1N9WY@1224,2KUVH@206389,2VKT4@28216,COG0437@1,COG0437@2 NA|NA|NA C MauM NapG family ferredoxin-type protein HGDHCNMN_03127 1121035.AUCH01000002_gene1471 0.0 1518.1 Rhodocyclales napA ko:K02567 ko00910,ko01120,map00910,map01120 M00529,M00530 R00798,R01106 RC02812 ko00000,ko00001,ko00002,ko01000 Bacteria 1NS3T@1224,2KUYS@206389,2VIB1@28216,COG0243@1,COG0243@2 NA|NA|NA C nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC HGDHCNMN_03128 94624.Bpet4078 1.8e-15 88.6 Betaproteobacteria napD ko:K02570 ko00000 Bacteria 1NGMR@1224,2VXKR@28216,COG3062@1,COG3062@2 NA|NA|NA P protein involved in formation of periplasmic nitrate reductase HGDHCNMN_03129 62928.azo3944 2.4e-41 175.3 Rhodocyclales napF GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0044424,GO:0044464,GO:0050896 ko:K02572 ko00000 Bacteria 1N09Y@1224,2KWRK@206389,2VSKG@28216,COG1145@1,COG1145@2 NA|NA|NA C ferredoxin-type protein napF HGDHCNMN_03130 1122929.KB908215_gene891 1.9e-115 423.7 Alphaproteobacteria Bacteria 1MU2C@1224,2TQS3@28211,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase HGDHCNMN_03131 748247.AZKH_0523 1.1e-85 322.8 Rhodocyclales MA20_26500 4.1.1.44 ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 R03470 RC00938 ko00000,ko00001,ko01000 Bacteria 1RBG0@1224,2KWHV@206389,2VKY2@28216,COG2128@1,COG2128@2 NA|NA|NA O Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity HGDHCNMN_03132 1304883.KI912532_gene2729 1.4e-183 649.8 Rhodocyclales ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1QTTF@1224,2KXR1@206389,2VMKQ@28216,COG4206@1,COG4206@2 NA|NA|NA H TonB dependent receptor HGDHCNMN_03133 1304883.KI912532_gene2728 1.2e-182 646.7 Rhodocyclales Bacteria 1MU2C@1224,2KY8Z@206389,2VH3V@28216,COG0745@1,COG0745@2,COG5001@1,COG5001@2 NA|NA|NA T Putative diguanylate phosphodiesterase HGDHCNMN_03134 1304883.KI912532_gene2727 1.1e-212 746.9 Rhodocyclales barA GO:0000155,GO:0000160,GO:0000302,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009636,GO:0009927,GO:0009987,GO:0010033,GO:0010035,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042221,GO:0042493,GO:0042542,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046677,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901700 2.7.13.3 ko:K07647,ko:K07678,ko:K18143,ko:K20974 ko01501,ko02020,ko02025,ko02026,ko05111,map01501,map02020,map02025,map02026,map05111 M00455,M00475,M00649,M00655,M00820 ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 Bacteria 1NRP8@1224,2KVM2@206389,2VGZQ@28216,COG0642@1,COG0784@1,COG0784@2,COG2205@2,COG3850@1,COG3850@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_03135 1304883.KI912532_gene2726 6.2e-47 194.1 Rhodocyclales Bacteria 1N6WD@1224,2E3CB@1,2M031@206389,2VUUB@28216,32YBM@2 NA|NA|NA S Domain of unknown function (DUF4154) HGDHCNMN_03136 748280.NH8B_0252 1.5e-188 665.6 Neisseriales ttuD 2.7.1.165 ko:K11529 ko00030,ko00260,ko00561,ko00630,ko00680,ko01100,ko01120,ko01130,ko01200,map00030,map00260,map00561,map00630,map00680,map01100,map01120,map01130,map01200 M00346 R08572 RC00002,RC00428 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVIK@1224,2KPQV@206351,2VHXK@28216,COG2379@1,COG2379@2 NA|NA|NA G MOFRL family HGDHCNMN_03137 85643.Tmz1t_0170 3.1e-73 282.0 Rhodocyclales nudC GO:0003674,GO:0003824,GO:0004551,GO:0005488,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0035529,GO:0043167,GO:0043169,GO:0046872,GO:0046914 1.3.7.1,3.6.1.22 ko:K03426,ko:K20449 ko00760,ko01100,ko01120,ko04146,map00760,map01100,map01120,map04146 R00103,R03004,R03164,R11104 RC00002,RC02422 ko00000,ko00001,ko01000 Bacteria 1QGCX@1224,2KW28@206389,2VQIR@28216,COG2816@1,COG2816@2 NA|NA|NA L NADH pyrophosphatase-like rudimentary NUDIX domain HGDHCNMN_03138 748247.AZKH_1650 6.5e-44 183.7 Rhodocyclales rirA ko:K13771,ko:K13772 ko05132,map05132 ko00000,ko00001,ko03000 Bacteria 1N05H@1224,2KWK6@206389,2VU41@28216,COG1959@1,COG1959@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_03139 1158292.JPOE01000002_gene2363 3.2e-57 228.4 Betaproteobacteria fucA 2.2.1.8,4.1.2.17 ko:K01628,ko:K18847 ko00051,ko01120,map00051,map01120 R02262 RC00603,RC00604 ko00000,ko00001,ko01000 Bacteria 1N5NU@1224,2VUZK@28216,COG0235@1,COG0235@2 NA|NA|NA G Class II aldolase HGDHCNMN_03141 159087.Daro_2112 2.1e-92 345.5 Rhodocyclales 4.1.3.27 ko:K01658,ko:K07010 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1MV8E@1224,2KW7J@206389,2VMMI@28216,COG2071@1,COG2071@2 NA|NA|NA S Peptidase C26 HGDHCNMN_03142 580332.Slit_0660 3.7e-45 188.0 Betaproteobacteria Bacteria 1PW9W@1224,2VUDE@28216,COG1846@1,COG1846@2 NA|NA|NA K MarR family HGDHCNMN_03143 159087.Daro_2111 2.3e-72 279.6 Betaproteobacteria Bacteria 1R9PF@1224,2VKV2@28216,COG0475@1,COG0475@2 NA|NA|NA P Sodium hydrogen exchanger HGDHCNMN_03144 1304883.KI912532_gene2756 4e-125 454.9 Rhodocyclales kefB Bacteria 1R9PF@1224,2KWJB@206389,2VKV2@28216,COG0475@1,COG0475@2 NA|NA|NA P Sodium/hydrogen exchanger family HGDHCNMN_03145 159087.Daro_2114 2.9e-130 471.9 Rhodocyclales ybdK GO:0003674,GO:0003824,GO:0016874,GO:0016879 ko:K06048 ko00000,ko01000 Bacteria 1MX4N@1224,2KVTN@206389,2VK27@28216,COG2170@1,COG2170@2 NA|NA|NA H ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity HGDHCNMN_03147 748247.AZKH_2028 1.2e-79 303.5 Rhodocyclales rpfE Bacteria 1R59K@1224,2KVHV@206389,2VKW9@28216,COG4255@1,COG4255@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_03148 748247.AZKH_2027 1.1e-255 889.0 Rhodocyclales recJ GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MU1M@1224,2KUSS@206389,2VIGF@28216,COG0608@1,COG0608@2 NA|NA|NA L Single-stranded-DNA-specific exonuclease RecJ HGDHCNMN_03149 1458275.AZ34_01535 2.1e-29 135.2 Comamonadaceae rbpA Bacteria 1N6VR@1224,2VRC4@28216,4AE4Z@80864,COG0724@1,COG0724@2 NA|NA|NA S PFAM RNP-1 like RNA-binding protein HGDHCNMN_03151 1163617.SCD_n00914 1.3e-52 213.0 Betaproteobacteria norE 1.9.3.1 ko:K02164,ko:K02276 ko00190,ko01100,map00190,map01100 M00155 R00081,R00294 RC00016,RC02794 ko00000,ko00001,ko00002,ko01000 3.D.4.10,3.D.4.4,3.D.4.6 Bacteria 1RDNK@1224,2VKAY@28216,COG1845@1,COG1845@2 NA|NA|NA C Heme copper-type cytochrome quinol oxidase subunit 3 HGDHCNMN_03152 62928.azo2427 6.3e-65 253.8 Rhodocyclales ko:K09932 ko00000 Bacteria 1RDPH@1224,2KWF9@206389,2VS2Q@28216,COG3224@1,COG3224@2 NA|NA|NA S Antibiotic biosynthesis monooxygenase HGDHCNMN_03153 596153.Alide_1110 5.1e-217 760.4 Comamonadaceae 1.2.1.16,1.2.1.20,1.2.1.79 ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 M00027 R00713,R00714,R02401 RC00080 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU1V@1224,2VHGR@28216,4ACJV@80864,COG1012@1,COG1012@2 NA|NA|NA C PFAM Aldehyde dehydrogenase HGDHCNMN_03155 1472716.KBK24_0100380 8.9e-98 363.6 Burkholderiaceae Bacteria 1KGW8@119060,1N663@1224,2VHV2@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HGDHCNMN_03156 1218074.BAXZ01000007_gene1911 1.3e-19 103.2 Burkholderiaceae 1.13.12.16,1.3.1.9 ko:K00459,ko:K02371 ko00061,ko00910,ko01100,ko01212,map00061,map00910,map01100,map01212 M00083 R00025,R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765 RC00052,RC00076,RC02541,RC02759 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1K5S5@119060,1MWPC@1224,2VNNB@28216,COG2070@1,COG2070@2 NA|NA|NA S PFAM 2-nitropropane dioxygenase NPD HGDHCNMN_03157 522306.CAP2UW1_3551 9.2e-67 260.0 Betaproteobacteria Bacteria 1RD60@1224,2VR8B@28216,COG2191@1,COG2191@2 NA|NA|NA C Formylmethanofuran dehydrogenase, subunit e HGDHCNMN_03158 305900.GV64_11265 1.4e-70 273.9 Oceanospirillales ko:K07001 ko00000 Bacteria 1Q82E@1224,1RRUE@1236,1XMRQ@135619,COG1752@1,COG1752@2 NA|NA|NA S Patatin-like phospholipase HGDHCNMN_03159 1122951.ATUE01000008_gene262 5.1e-45 186.8 Moraxellaceae hsdM 2.1.1.72 ko:K03427 ko00000,ko01000,ko02048 Bacteria 1MW3A@1224,1RMRA@1236,3NMFA@468,COG0286@1,COG0286@2 NA|NA|NA V N-6 DNA Methylase HGDHCNMN_03160 1348657.M622_12905 1.3e-65 257.3 Betaproteobacteria 3.1.21.3 ko:K01154 ko00000,ko01000,ko02048 Bacteria 1Q4FB@1224,2VR1G@28216,COG0732@1,COG0732@2 NA|NA|NA V Type I restriction modification DNA specificity domain HGDHCNMN_03162 1045855.DSC_07165 3.3e-55 221.5 Xanthomonadales Bacteria 1N2SJ@1224,1SA34@1236,1XAIR@135614,28W7P@1,2ZI89@2 NA|NA|NA HGDHCNMN_03163 340.xcc-b100_3284 2.7e-75 288.5 Xanthomonadales Bacteria 1RDHG@1224,1S125@1236,1XAWJ@135614,COG4849@1,COG4849@2 NA|NA|NA S Protein conserved in bacteria HGDHCNMN_03164 1348657.M622_05990 0.0 1695.6 Rhodocyclales hsdR 3.1.21.3 ko:K01153 ko00000,ko01000,ko02048 Bacteria 1MU96@1224,2KZSD@206389,2VMB0@28216,COG0610@1,COG0610@2 NA|NA|NA V Type I restriction enzyme R protein N terminus (HSDR_N) HGDHCNMN_03165 1123487.KB892837_gene4110 1.5e-27 128.3 Rhodocyclales ypeB 2.7.7.7 ko:K02342,ko:K09954,ko:K10857 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1N7GT@1224,2KXD0@206389,2VW2G@28216,COG3530@1,COG3530@2 NA|NA|NA S Putative quorum-sensing-regulated virulence factor HGDHCNMN_03166 76114.ebA4984 2.3e-111 409.8 Betaproteobacteria 3.6.4.13 ko:K17675 ko00000,ko01000,ko03029 Bacteria 1QVID@1224,2WGSM@28216,COG1204@1,COG1204@2 NA|NA|NA L Mitochondrial degradasome RNA helicase subunit C terminal HGDHCNMN_03167 1000565.METUNv1_03190 6e-38 163.3 Rhodocyclales Bacteria 1R4TK@1224,2KWGJ@206389,2VQIV@28216,COG1305@1,COG1305@2 NA|NA|NA E Transglutaminase-like superfamily HGDHCNMN_03168 296591.Bpro_4034 5.5e-29 133.7 Comamonadaceae Bacteria 1NGI4@1224,2EGJT@1,2VX3Y@28216,33ABY@2,4AFJ4@80864 NA|NA|NA S Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) HGDHCNMN_03169 1223521.BBJX01000021_gene2990 2.3e-35 154.5 Comamonadaceae dbi 1.1.1.35 ko:K07516 ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212 M00087 R01975,R04737,R04739,R04741,R04743,R04745,R04748,R05305 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000 Bacteria 1MZPP@1224,2VUK0@28216,4AEX2@80864,COG4281@1,COG4281@2 NA|NA|NA I PFAM acyl-coA-binding protein, ACBP HGDHCNMN_03170 358220.C380_02490 3.9e-191 674.5 Comamonadaceae 2.3.1.20 ko:K00635 ko00561,ko01100,map00561,map01100 M00089 R02251 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 Bacteria 1N7HY@1224,2VIJ1@28216,4ACWF@80864,COG1020@1,COG1020@2 NA|NA|NA Q Protein of unknown function (DUF1298) HGDHCNMN_03171 296591.Bpro_4044 5e-118 430.6 Comamonadaceae coaX 2.7.1.33,6.3.4.15 ko:K01947,ko:K03525 ko00770,ko00780,ko01100,map00770,map00780,map01100 M00120 R01074,R02971,R03018,R04391,R05145 RC00002,RC00017,RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUYA@1224,2VK1G@28216,4A9TD@80864,COG1521@1,COG1521@2 NA|NA|NA F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis HGDHCNMN_03172 365046.Rta_08520 9.5e-81 306.6 Comamonadaceae ko:K18098,ko:K19733 ko02024,map02024 ko00000,ko00001,ko03000 Bacteria 1NN5P@1224,2WBD7@28216,4AHFF@80864,COG2197@1,COG2197@2 NA|NA|NA K Bacterial regulatory proteins, luxR family HGDHCNMN_03173 365046.Rta_08510 3.5e-111 408.7 Proteobacteria Bacteria 1QY4M@1224,COG0642@1,COG2205@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_03174 365046.Rta_08500 1e-70 273.9 Proteobacteria chpB 2.1.1.80,3.1.1.61,3.5.1.44 ko:K03412,ko:K03413,ko:K06597,ko:K13924 ko02020,ko02030,map02020,map02030 M00506,M00507 ko00000,ko00001,ko00002,ko01000,ko02022,ko02035 Bacteria 1QUZP@1224,COG2201@1,COG2201@2 NA|NA|NA NT Response regulator receiver domain HGDHCNMN_03175 1504672.669785694 2.7e-145 521.9 Comamonadaceae cqsA GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769 2.3.1.29,2.3.1.47 ko:K00639,ko:K00652,ko:K10915 ko00260,ko00780,ko01100,ko02024,ko05111,map00260,map00780,map01100,map02024,map05111 M00123,M00573,M00577 R00371,R03210,R10124 RC00004,RC00039,RC00394,RC02725 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MVVH@1224,2VNA4@28216,4AJ1H@80864,COG0156@1,COG0156@2 NA|NA|NA H Aminotransferase class I and II HGDHCNMN_03176 640081.Dsui_1047 4.4e-58 230.7 Rhodocyclales Bacteria 1REHH@1224,2KWCV@206389,2VR3P@28216,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese Homology Domain HGDHCNMN_03177 522306.CAP2UW1_3078 5.5e-108 397.9 Betaproteobacteria fieF Bacteria 1MUDS@1224,2VJ1J@28216,COG0053@1,COG0053@2 NA|NA|NA P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family HGDHCNMN_03178 640081.Dsui_1048 1.4e-246 858.6 Rhodocyclales glnA GO:0003674,GO:0003824,GO:0004356,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006541,GO:0006542,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009314,GO:0009628,GO:0009987,GO:0016053,GO:0016211,GO:0016853,GO:0016866,GO:0016874,GO:0016879,GO:0016880,GO:0019676,GO:0019740,GO:0019752,GO:0034022,GO:0042537,GO:0042802,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050486,GO:0050896,GO:0071704,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.4.4.3,6.3.1.2 ko:K01915,ko:K20712 ko00220,ko00250,ko00627,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00627,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 R00253,R06988,R09284 RC00010,RC01754,RC02798 ko00000,ko00001,ko01000,ko04147 iJN746.PP_5046 Bacteria 1MUGQ@1224,2KV8R@206389,2VHYE@28216,COG0174@1,COG0174@2 NA|NA|NA E glutamine synthetase HGDHCNMN_03179 1123487.KB892857_gene2346 9.6e-38 163.3 Rhodocyclales Bacteria 1MZQ9@1224,2BWQ4@1,2KWKW@206389,2VSNR@28216,32QZV@2 NA|NA|NA S Domain of unknown function (DUF4124) HGDHCNMN_03180 62928.azo0736 3.1e-150 538.1 Rhodocyclales glnL GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042578,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564 2.7.13.3 ko:K07708,ko:K07710 ko02020,map02020 M00497,M00500 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MVN6@1224,2KUZZ@206389,2VJN7@28216,COG3852@1,COG3852@2 NA|NA|NA T Signal transduction histidine kinase, nitrogen specific HGDHCNMN_03181 62928.azo0735 4.6e-221 773.9 Rhodocyclales glnG GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 ko:K07712 ko02020,map02020 M00497 ko00000,ko00001,ko00002,ko02022 Bacteria 1MU0N@1224,2KV3K@206389,2VHSB@28216,COG2204@1,COG2204@2 NA|NA|NA T COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains HGDHCNMN_03182 85643.Tmz1t_3652 3.9e-89 334.7 Rhodocyclales birA GO:0000166,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004077,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009305,GO:0009374,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0017053,GO:0017076,GO:0017144,GO:0018130,GO:0018271,GO:0019538,GO:0019752,GO:0019842,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0036094,GO:0036211,GO:0042364,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1990837 2.7.1.33,6.3.4.15 ko:K01947,ko:K03524 ko00770,ko00780,ko01100,map00770,map00780,map01100 M00120 R01074,R02971,R03018,R04391,R05145 RC00002,RC00017,RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko00002,ko01000,ko03000 Bacteria 1MWCC@1224,2KVTP@206389,2VNXD@28216,COG0340@1,COG0340@2 NA|NA|NA H Biotin/lipoate A/B protein ligase family HGDHCNMN_03185 159087.Daro_3820 2.1e-298 1030.8 Rhodocyclales tmoA 1.14.13.236,1.14.13.69 ko:K15760,ko:K16242,ko:K22357 ko00361,ko00362,ko00623,ko00625,ko01100,ko01120,ko01220,map00361,map00362,map00623,map00625,map01100,map01120,map01220 M00538,M00548 R02550,R03560,R03562,R03608,R05444,R05666,R10042,R10043,R11901 RC00046,RC00269,RC00490,RC01383 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWWK@1224,2KYD5@206389,2VKV0@28216,COG3350@1,COG3350@2 NA|NA|NA S YHS domain HGDHCNMN_03186 1123401.JHYQ01000023_gene1203 1.3e-33 148.7 Thiotrichales 1.14.13.236 ko:K15761 ko00623,ko01100,ko01120,ko01220,map00623,map01100,map01120,map01220 M00538 R02550,R03562,R05666 RC00269,RC00490 ko00000,ko00001,ko00002,ko01000 Bacteria 1N1P7@1224,1SG4M@1236,2BXCC@1,32VH7@2,462XY@72273 NA|NA|NA Q Toluene-4-monooxygenase system protein B (TmoB) HGDHCNMN_03187 870187.Thini_4257 2.1e-52 211.5 Thiotrichales tmoC ko:K05710,ko:K15762,ko:K22360 ko00360,ko00623,ko00625,ko00920,ko01100,ko01120,ko01220,map00360,map00623,map00625,map00920,map01100,map01120,map01220 M00538,M00545 R02550,R03562,R05444,R05666,R06782,R06783,R09513,R11901 RC00098,RC00269,RC00490,RC01383,RC02556 br01602,ko00000,ko00001,ko00002 Bacteria 1RHEY@1224,1SA8F@1236,462QT@72273,COG2146@1,COG2146@2 NA|NA|NA P Rieske-like [2Fe-2S] domain HGDHCNMN_03188 870187.Thini_4258 1.9e-47 194.9 Thiotrichales grcA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006566,GO:0006567,GO:0006807,GO:0008150,GO:0008152,GO:0008861,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009987,GO:0016054,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.14.13.236 ko:K06866,ko:K15763 ko00623,ko01100,ko01120,ko01220,map00623,map01100,map01120,map01220 M00538 R02550,R03562,R05666 RC00269,RC00490 ko00000,ko00001,ko00002,ko01000 iSF_1195.SF2641,iSFxv_1172.SFxv_2898,iS_1188.S2814 Bacteria 1N4YC@1224,1SB8A@1236,462VI@72273,COG3445@1,COG3445@2 NA|NA|NA S MmoB/DmpM family HGDHCNMN_03189 497321.C664_16395 1.3e-166 592.4 Betaproteobacteria tmoE 1.14.13.236 ko:K15764 ko00623,ko01100,ko01120,ko01220,map00623,map01100,map01120,map01220 M00538 R02550,R03562,R05666 RC00269,RC00490 ko00000,ko00001,ko00002,ko01000 Bacteria 1NC0X@1224,2DB89@1,2VKS3@28216,2Z7R0@2 NA|NA|NA Q Methane/Phenol/Toluene Hydroxylase HGDHCNMN_03190 305700.B447_13164 9.4e-157 559.7 Rhodocyclales 1.18.1.3 ko:K02823,ko:K15765,ko:K22362 ko00240,ko00623,ko00625,ko00920,ko01100,ko01120,ko01220,map00240,map00623,map00625,map00920,map01100,map01120,map01220 M00538 R02550,R03562,R05444,R05666,R09513,R11901 RC00269,RC00490,RC01383,RC02556 ko00000,ko00001,ko00002,ko01000 Bacteria 1MXPX@1224,2KY8B@206389,2VI2P@28216,COG0543@1,COG0543@2,COG1018@1,COG1018@2 NA|NA|NA C COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases HGDHCNMN_03191 1123401.JHYQ01000023_gene1198 0.0 1338.9 Gammaproteobacteria Bacteria 1RCM9@1224,1RSCN@1236,COG0642@1,COG0745@1,COG0745@2,COG2205@2,COG4191@1,COG4191@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_03192 870187.Thini_4262 8.6e-73 280.0 Gammaproteobacteria nodW ko:K14987 ko02020,map02020 M00524 ko00000,ko00001,ko00002,ko02022 Bacteria 1N6WR@1224,1S0TV@1236,COG4566@1,COG4566@2 NA|NA|NA K response regulator HGDHCNMN_03193 159087.Daro_3559 1.1e-11 77.0 Rhodocyclales Bacteria 1PAW1@1224,28X8G@1,2KZEZ@206389,2W650@28216,2ZJ6K@2 NA|NA|NA HGDHCNMN_03194 62928.azo0953 7.6e-96 357.1 Rhodocyclales 1.5.1.39 ko:K19286 ko00740,ko01100,map00740,map01100 R05705,R05706 RC00126 ko00000,ko00001,ko01000 Bacteria 1NIJ8@1224,2KXG2@206389,2VNBD@28216,COG0778@1,COG0778@2 NA|NA|NA C Nitroreductase family HGDHCNMN_03198 1304883.KI912532_gene2084 1.7e-51 208.8 Rhodocyclales fadB 1.1.1.35,4.2.1.17,5.1.2.3 ko:K01782,ko:K07516 ko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212 M00032,M00087 R01975,R03026,R03045,R03276,R04137,R04170,R04203,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04743,R04744,R04745,R04746,R04748,R04749,R05066,R05305,R06411,R06412,R06941,R06942,R07935,R07951,R08093,R08094 RC00029,RC00099,RC00117,RC00241,RC00525,RC00831,RC00834,RC00896,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115 ko00000,ko00001,ko00002,ko01000 iYO844.BSU32840 Bacteria 1MU9P@1224,2KV6D@206389,2VHS7@28216,COG1024@1,COG1024@2,COG1250@1,COG1250@2 NA|NA|NA I 3-hydroxyacyl-CoA dehydrogenase HGDHCNMN_03199 748247.AZKH_4262 1.4e-180 639.0 Rhodocyclales fadA 2.3.1.16,2.3.1.9 ko:K00626,ko:K00632 ko00071,ko00072,ko00280,ko00281,ko00310,ko00362,ko00380,ko00592,ko00620,ko00630,ko00640,ko00642,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00281,map00310,map00362,map00380,map00592,map00620,map00630,map00640,map00642,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00087,M00088,M00095,M00113,M00373,M00374,M00375 R00238,R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095 RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MU5G@1224,2KV8Q@206389,2VIF8@28216,COG0183@1,COG0183@2 NA|NA|NA I Belongs to the thiolase family HGDHCNMN_03200 216591.BCAM0133 7.9e-139 501.5 Burkholderiaceae pknK GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019222,GO:0019538,GO:0030312,GO:0031323,GO:0031326,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0051090,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564,GO:1903506,GO:2000112,GO:2001141 2.7.11.1 ko:K03556,ko:K08282,ko:K12132,ko:K13419 ko00000,ko01000,ko01001,ko03000 Bacteria 1K3IC@119060,1MVZZ@1224,2VM6A@28216,COG2909@1,COG2909@2 NA|NA|NA K LuxR family transcriptional regulator HGDHCNMN_03201 1458357.BG58_25610 1.8e-205 722.2 Burkholderiaceae alkK ko:K00666 ko00000,ko01000,ko01004 Bacteria 1JZVI@119060,1MUMC@1224,2VGZE@28216,COG0318@1,COG0318@2 NA|NA|NA IQ AMP-binding enzyme HGDHCNMN_03203 1453503.AU05_21030 4.8e-15 87.4 Pseudomonas aeruginosa group Bacteria 1MXEB@1224,1RPY8@1236,1YEK4@136841,COG3203@1,COG3203@2 NA|NA|NA M Protein of unknown function (DUF1302) HGDHCNMN_03204 497321.C664_04127 1.2e-90 339.7 Rhodocyclales 5.3.3.18 ko:K15866 ko00360,ko01120,map00360,map01120 R09837,R09839 RC00004,RC00326,RC02689,RC03003 ko00000,ko00001,ko01000 Bacteria 1MVQN@1224,2KW6T@206389,2WEFN@28216,COG1024@1,COG1024@2 NA|NA|NA I Enoyl-CoA hydratase carnithine racemase HGDHCNMN_03206 62928.azo0471 3.2e-69 268.5 Rhodocyclales Z012_07930 GO:0000270,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0030203,GO:0031224,GO:0042546,GO:0043164,GO:0043170,GO:0044085,GO:0044425,GO:0044464,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901564 Bacteria 1MVW8@1224,2KWND@206389,2VSTA@28216,COG1434@1,COG1434@2 NA|NA|NA S DUF218 domain HGDHCNMN_03207 62928.azo0473 2.4e-07 62.4 Rhodocyclales Bacteria 1NGQ0@1224,2DTQA@1,2KXH0@206389,2VYYZ@28216,33M9S@2 NA|NA|NA S Protein of unknown function (DUF2802) HGDHCNMN_03208 1304883.KI912532_gene444 6.4e-13 81.6 Rhodocyclales ko:K03749 ko00000 Bacteria 1NED8@1224,2KX45@206389,2VWRX@28216,COG3087@1,COG3087@2 NA|NA|NA D Sporulation related domain HGDHCNMN_03210 1123367.C666_06225 3e-200 705.3 Rhodocyclales Bacteria 1MU2C@1224,2KVQ2@206389,2VH3V@28216,COG2204@1,COG2204@2,COG5001@1,COG5001@2 NA|NA|NA T Response regulator receiver modulated diguanylate cyclase phosphodiesterase HGDHCNMN_03211 62928.azo3498 1.7e-77 297.4 Rhodocyclales 2.1.1.80,2.7.13.3,3.1.1.61 ko:K07708,ko:K13924 ko02020,ko02030,map02020,map02030 M00497,M00506 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 Bacteria 1QVCW@1224,2KX7K@206389,2WGQR@28216,COG3852@1,COG3852@2 NA|NA|NA T COG0642 Signal transduction histidine kinase HGDHCNMN_03212 62928.azo3497 1.9e-142 512.3 Rhodocyclales yuxH 3.1.4.52 ko:K07181 ko05111,map05111 ko00000,ko00001,ko01000 Bacteria 1MVW1@1224,2KUR8@206389,2VKZY@28216,COG3434@1,COG3434@2 NA|NA|NA T signal transduction protein containing EAL and modified HD-GYP domains HGDHCNMN_03213 748247.AZKH_3854 3e-126 458.4 Rhodocyclales fre GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006807,GO:0006950,GO:0006979,GO:0008047,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0019538,GO:0030091,GO:0030234,GO:0042602,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0050896,GO:0052875,GO:0055114,GO:0065007,GO:0065009,GO:0071704,GO:0098772,GO:1901564 1.16.1.3,1.17.1.1,1.5.1.41 ko:K00523,ko:K02823,ko:K05368,ko:K18248,ko:K20256 ko00240,ko00520,ko00627,ko00740,ko00860,ko01100,ko01120,ko02024,map00240,map00520,map00627,map00740,map00860,map01100,map01120,map02024 M00637 R00097,R00823,R00825,R03391,R03392,R05705 RC00126,RC00192,RC00220,RC00230 br01602,ko00000,ko00001,ko00002,ko01000 iSF_1195.SF3920,iSFxv_1172.SFxv_4273,iS_1188.S3832 Bacteria 1MV72@1224,2KVA5@206389,2VI9K@28216,COG0543@1,COG0543@2,COG1018@1,COG1018@2 NA|NA|NA C COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases HGDHCNMN_03214 62928.azo3495 6.9e-103 380.6 Rhodocyclales yeeZ 1.5.5.1 ko:K00311 ko00000,ko01000 Bacteria 1MWVJ@1224,2KUSE@206389,2VJ3T@28216,COG0451@1,COG0451@2 NA|NA|NA GM epimerase dehydratase HGDHCNMN_03215 85643.Tmz1t_3722 2.9e-56 224.6 Rhodocyclales ko:K08973 ko00000 Bacteria 1RHGS@1224,2KWBC@206389,2VR5Y@28216,COG1981@1,COG1981@2 NA|NA|NA S membrane HGDHCNMN_03216 748247.AZKH_3851 1.4e-164 585.9 Rhodocyclales rlmL GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016423,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.173,2.1.1.264 ko:K07444,ko:K12297 R07234 RC00003 ko00000,ko01000,ko03009 Bacteria 1MUQM@1224,2KV05@206389,2VHMY@28216,COG0116@1,COG0116@2 NA|NA|NA L Belongs to the methyltransferase superfamily HGDHCNMN_03217 748247.AZKH_3850 3.6e-189 667.5 Rhodocyclales pilU ko:K02670 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1QTTX@1224,2KU9J@206389,2VIWS@28216,COG5008@1,COG5008@2 NA|NA|NA NU twitching motility protein HGDHCNMN_03218 62928.azo3468 1.3e-174 619.0 Rhodocyclales pilT ko:K02669 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1MU3J@1224,2KVBG@206389,2VHHW@28216,COG2805@1,COG2805@2 NA|NA|NA NU twitching motility protein HGDHCNMN_03219 85643.Tmz1t_3702 5e-85 320.9 Rhodocyclales yggS GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 ko:K06997 ko00000 Bacteria 1MWN7@1224,2KU9T@206389,2VHNY@28216,COG0325@1,COG0325@2 NA|NA|NA S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis HGDHCNMN_03220 748247.AZKH_3847 6.9e-102 377.1 Rhodocyclales proC 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 Bacteria 1R5J1@1224,2KUUS@206389,2VJD1@28216,COG0345@1,COG0345@2 NA|NA|NA E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline HGDHCNMN_03221 1123367.C666_06355 5.8e-55 220.7 Rhodocyclales yggT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02221 ko00000,ko02044 Bacteria 1RCZV@1224,2KWT0@206389,2VRHV@28216,COG0762@1,COG0762@2 NA|NA|NA S integral membrane protein HGDHCNMN_03222 76114.ebA1762 8.9e-28 129.4 Rhodocyclales yggU ko:K09131 ko00000 Bacteria 1MZ4E@1224,2KX5K@206389,2VWDY@28216,COG1872@1,COG1872@2 NA|NA|NA S DUF167 HGDHCNMN_03223 1318628.MARLIPOL_05365 3.9e-37 162.2 Proteobacteria Bacteria 1NEC2@1224,2DK8S@1,308W6@2 NA|NA|NA S PEP-CTERM motif HGDHCNMN_03224 1304883.KI912532_gene3108 3.4e-294 1016.9 Rhodocyclales aceB GO:0003674,GO:0003824,GO:0004474,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044424,GO:0044464,GO:0046487,GO:0046912,GO:0071704 2.3.3.9 ko:K01638 ko00620,ko00630,ko01100,ko01110,ko01120,ko01200,map00620,map00630,map01100,map01110,map01120,map01200 M00012 R00472 RC00004,RC00308,RC02747 ko00000,ko00001,ko00002,ko01000 iEC55989_1330.EC55989_4499,iLF82_1304.LF82_0013,iNRG857_1313.NRG857_20010 Bacteria 1MVEV@1224,2KVUU@206389,2VJK0@28216,COG2225@1,COG2225@2 NA|NA|NA C Malate synthase HGDHCNMN_03225 1304883.KI912532_gene1527 3e-94 351.7 Rhodocyclales ko:K07090 ko00000 Bacteria 1R712@1224,2KV6U@206389,2VIJA@28216,COG0730@1,COG0730@2 NA|NA|NA S membrane transporter protein HGDHCNMN_03226 748247.AZKH_1243 2.6e-89 335.1 Rhodocyclales had 3.8.1.2 ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 R05287 RC00697 ko00000,ko00001,ko01000 Bacteria 1MVWN@1224,2KVN2@206389,2VI7A@28216,COG1011@1,COG1011@2 NA|NA|NA S Haloacid dehalogenase-like hydrolase HGDHCNMN_03227 76114.ebA811 2.4e-127 461.8 Rhodocyclales dmlR_1 Bacteria 1MW16@1224,2KV2D@206389,2VJ8W@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_03229 1165096.ARWF01000001_gene1779 6.5e-19 100.5 Nitrosomonadales ko:K02650,ko:K02655 ko02020,map02020 ko00000,ko00001,ko02035,ko02044 3.A.15.2 Bacteria 1MZZW@1224,2KN6M@206350,2VU8H@28216,COG4968@1,COG4968@2 NA|NA|NA NU Type IV minor pilin ComP, DNA uptake sequence receptor HGDHCNMN_03230 595537.Varpa_4916 1.2e-21 110.2 Comamonadaceae ko:K02456,ko:K08084 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15,3.A.15.2 Bacteria 1NA9B@1224,2VV1S@28216,4AJN6@80864,COG4970@1,COG4970@2 NA|NA|NA NU Type II transport protein GspH HGDHCNMN_03231 580332.Slit_2084 3e-11 75.1 Nitrosomonadales pilV ko:K02671 ko00000,ko02035,ko02044 Bacteria 1N7AC@1224,2VW8B@28216,44W3Z@713636,COG4967@1,COG4967@2 NA|NA|NA NU type IV pilus modification protein PilV HGDHCNMN_03232 1123073.KB899245_gene67 5e-35 155.6 Proteobacteria ko:K02672 ko00000,ko02035,ko02044 Bacteria 1RH2G@1224,COG4966@1,COG4966@2 NA|NA|NA NU Type IV Pilus-assembly protein W HGDHCNMN_03233 1101195.Meth11DRAFT_2549 6.8e-15 87.8 Nitrosomonadales ko:K02673 ko00000,ko02035,ko02044 Bacteria 1N9CE@1224,2KNA2@206350,2VWPP@28216,COG4726@1,COG4726@2 NA|NA|NA NU Pilus assembly protein PilX HGDHCNMN_03234 595537.Varpa_4912 7.3e-194 684.9 Comamonadaceae pilY ko:K02674 ko00000,ko02035,ko02044 Bacteria 1NUAV@1224,2VHY8@28216,4ABJ6@80864,COG3419@1,COG3419@2 NA|NA|NA NU Tfp pilus assembly protein tip-associated adhesin PilY1-like protein HGDHCNMN_03236 267608.RSp0311 6e-146 524.2 Burkholderiaceae oprJ ko:K08721 M00639 ko00000,ko00002,ko02000 1.B.17 Bacteria 1K6S0@119060,1MUA8@1224,2VI5V@28216,COG1538@1,COG1538@2 NA|NA|NA M Outer membrane efflux protein HGDHCNMN_03237 640081.Dsui_3182 0.0 1545.4 Rhodocyclales acrF ko:K03296,ko:K18138,ko:K18146 ko01501,ko01503,map01501,map01503 M00647,M00649,M00699,M00718 ko00000,ko00001,ko00002,ko01504,ko02000 2.A.6.2,2.A.6.2.40 Bacteria 1MU48@1224,2KVA4@206389,2VHFI@28216,COG0841@1,COG0841@2 NA|NA|NA U efflux pump HGDHCNMN_03238 640081.Dsui_3181 1e-121 443.4 Rhodocyclales acrE ko:K03585,ko:K18145 ko01501,ko01503,map01501,map01503 M00646,M00647,M00649,M00699,M00718 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,2.A.6.2.40,8.A.1,8.A.1.6 Bacteria 1MU78@1224,2KVSS@206389,2VINC@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family HGDHCNMN_03239 1121035.AUCH01000014_gene2437 9.7e-87 326.6 Rhodocyclales Bacteria 1MVQT@1224,2KW2C@206389,2VKJH@28216,COG0745@1,COG0745@2 NA|NA|NA T Transcriptional regulatory protein, C terminal HGDHCNMN_03240 640081.Dsui_3179 5.5e-115 421.0 Rhodocyclales Bacteria 1N17V@1224,2KWTE@206389,2VK7C@28216,COG0642@1,COG2205@2 NA|NA|NA T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain HGDHCNMN_03241 857087.Metme_2111 6.2e-44 184.5 Gammaproteobacteria Bacteria 1R37W@1224,1T64I@1236,28ZPQ@1,2ZMET@2 NA|NA|NA HGDHCNMN_03244 159087.Daro_3547 7.5e-145 520.4 Rhodocyclales ko:K00786 ko00000,ko01000 Bacteria 1MUB7@1224,2KVGJ@206389,2VN6W@28216,COG0438@1,COG0438@2 NA|NA|NA M Glycosyltransferase Family 4 HGDHCNMN_03245 1304883.KI912532_gene1528 4.1e-118 431.0 Rhodocyclales lpxH 3.6.1.54 ko:K03269 ko00540,ko01100,map00540,map01100 M00060 R04549 RC00002 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1MVKD@1224,2KUX6@206389,2VHU3@28216,COG2908@1,COG2908@2 NA|NA|NA S Calcineurin-like phosphoesterase superfamily domain HGDHCNMN_03246 314345.SPV1_12340 2.7e-156 558.5 Proteobacteria corA ko:K03284 ko00000,ko02000 1.A.35.1,1.A.35.3 iAF987.Gmet_0134 Bacteria 1MWMP@1224,COG0598@1,COG0598@2 NA|NA|NA P Mediates influx of magnesium ions HGDHCNMN_03247 62928.azo1008 2.1e-192 678.7 Rhodocyclales rhlE2 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 ko:K11927 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 1MU49@1224,2KVA7@206389,2VH16@28216,COG0513@1,COG0513@2 NA|NA|NA L Belongs to the DEAD box helicase family HGDHCNMN_03248 76114.ebA4504 3.5e-109 401.7 Rhodocyclales rlmM GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.186 ko:K06968 ko00000,ko01000,ko03009 Bacteria 1MWBM@1224,2KVEG@206389,2VJ71@28216,COG2933@1,COG2933@2 NA|NA|NA J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily HGDHCNMN_03249 1121035.AUCH01000014_gene2349 2.9e-129 468.4 Rhodocyclales tas 1.1.1.91 ko:K05882 ko00000,ko01000 Bacteria 1MV2Y@1224,2KUTE@206389,2VI7D@28216,COG0667@1,COG0667@2 NA|NA|NA C PFAM aldo keto reductase HGDHCNMN_03250 748247.AZKH_0868 6.2e-115 421.4 Rhodocyclales Bacteria 1R3VR@1224,2KVPZ@206389,2VMY5@28216,COG2206@1,COG2206@2 NA|NA|NA T Domain of unknown function (DUF3391) HGDHCNMN_03251 748247.AZKH_0867 7.1e-99 368.2 Rhodocyclales Bacteria 1RBRP@1224,2KW9Q@206389,2VQ9F@28216,COG2199@1,COG2199@2,COG2200@1,COG2200@2 NA|NA|NA T Diguanylate phosphodiesterase HGDHCNMN_03252 1123487.KB892835_gene3613 1.1e-24 119.8 Rhodocyclales Bacteria 1NA6C@1224,2E6EI@1,2KXGM@206389,2VW1M@28216,33120@2 NA|NA|NA HGDHCNMN_03253 62928.azo1012 9e-120 437.2 Rhodocyclales ugpB ko:K02027,ko:K05813 ko02010,map02010 M00198,M00207 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.3 Bacteria 1MVMW@1224,2KVDH@206389,2VH0F@28216,COG1653@1,COG1653@2 NA|NA|NA G ABC-type sugar transport system, periplasmic component HGDHCNMN_03254 62928.azo1013 4.5e-55 221.5 Rhodocyclales ugpQ GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0008081,GO:0008889,GO:0016787,GO:0016788,GO:0042578,GO:0043167,GO:0043169,GO:0046872,GO:0047389,GO:0047395 3.1.4.46 ko:K01126 ko00564,map00564 R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 iEC042_1314.EC042_3710,iEC55989_1330.EC55989_3857 Bacteria 1MU8H@1224,2KWGE@206389,2VKF6@28216,COG0584@1,COG0584@2 NA|NA|NA C glycerophosphoryl diester phosphodiesterase HGDHCNMN_03255 1123367.C666_04570 2.1e-142 511.9 Rhodocyclales ispB GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009108,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663 2.5.1.30,2.5.1.90 ko:K00805,ko:K02523 ko00900,ko01110,map00900,map01110 R09247,R09248 RC00279 ko00000,ko00001,ko01000,ko01006 iYL1228.KPN_03597,ic_1306.c3945 Bacteria 1MUK6@1224,2KV65@206389,2VHX4@28216,COG0142@1,COG0142@2 NA|NA|NA H Belongs to the FPP GGPP synthase family HGDHCNMN_03257 1434929.X946_1373 6.9e-82 310.8 Burkholderiaceae Bacteria 1K5FJ@119060,1QTV9@1224,2VQV6@28216,COG4977@1,COG4977@2 NA|NA|NA K helix-turn-helix- domain containing protein, AraC type HGDHCNMN_03258 159087.Daro_1891 2.1e-63 248.4 Rhodocyclales iorA 1.3.99.16 ko:K07302,ko:K07303 ko00000,ko01000 Bacteria 1RD8C@1224,2KWI4@206389,2VQ9M@28216,COG2080@1,COG2080@2 NA|NA|NA C [2Fe-2S] binding domain HGDHCNMN_03259 159087.Daro_1892 6.5e-304 1049.7 Rhodocyclales iorB 1.3.99.16 ko:K07303 ko00000,ko01000 Bacteria 1QTTJ@1224,2KVA6@206389,2VHB9@28216,COG1529@1,COG1529@2 NA|NA|NA C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HGDHCNMN_03260 1123393.KB891332_gene2833 9.6e-130 469.9 Hydrogenophilales ko:K07402 ko00000 Bacteria 1KRE9@119069,1MXKU@1224,2VHIK@28216,COG1975@1,COG1975@2 NA|NA|NA O XdhC and CoxI family HGDHCNMN_03261 497321.C664_06418 8.5e-46 190.3 Rhodocyclales ygfJ 2.7.7.76 ko:K07141 ko00790,map00790 R11582 ko00000,ko00001,ko01000 Bacteria 1MW0X@1224,2KX02@206389,2VSIN@28216,COG2068@1,COG2068@2 NA|NA|NA S MobA-like NTP transferase domain HGDHCNMN_03262 1304883.KI912532_gene1990 4.3e-308 1063.9 Rhodocyclales 2.1.1.80,3.1.1.61 ko:K13924 ko02020,ko02030,map02020,map02030 M00506 ko00000,ko00001,ko00002,ko01000,ko02022,ko02035 Bacteria 1NXDJ@1224,2KZYF@206389,2W1GY@28216,COG0642@1,COG0642@2,COG0834@1,COG0834@2,COG2461@1,COG2461@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HGDHCNMN_03266 861299.J421_5661 1.3e-16 96.7 Bacteria 3.4.24.3 ko:K01387 ko00000,ko01000,ko01002,ko02042 Bacteria COG1404@1,COG1404@2 NA|NA|NA O Belongs to the peptidase S8 family HGDHCNMN_03267 1144307.PMI04_00152 1e-74 287.3 Sphingomonadales Bacteria 1R00V@1224,2KEV8@204457,2TZQ1@28211,COG3409@1,COG3409@2 NA|NA|NA M Domain of unknown function (DUF4157) HGDHCNMN_03268 323261.Noc_1876 4.8e-09 69.7 Chromatiales dnaX 2.4.99.16,2.7.7.7 ko:K02343,ko:K02519,ko:K03528,ko:K07114,ko:K16147 ko00230,ko00240,ko00500,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map00500,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378,R09994 RC02795 ko00000,ko00001,ko00002,ko01000,ko02000,ko03012,ko03029,ko03032,ko03036,ko03400 1.A.13.2.2,1.A.13.2.3 GH13 Bacteria 1QZ0G@1224,1SFRU@1236,1WZJB@135613,COG1388@1,COG1388@2,COG3115@1,COG3115@2 NA|NA|NA D Domain of unknown function (DUF4157) HGDHCNMN_03269 314271.RB2654_18673 5.1e-31 142.1 Alphaproteobacteria Bacteria 1NZJ8@1224,2F9G9@1,2UTQE@28211,341SU@2 NA|NA|NA HGDHCNMN_03270 305700.B447_02121 1.8e-97 362.5 Rhodocyclales Bacteria 1MUPX@1224,2KZZM@206389,2VTQ7@28216,COG1028@1,COG1028@2 NA|NA|NA IQ KR domain HGDHCNMN_03271 1000565.METUNv1_00111 2.3e-241 842.0 Rhodocyclales 2.7.11.1 ko:K08282 ko00000,ko01000 Bacteria 1MV6M@1224,2KUEK@206389,2VIEC@28216,COG0553@1,COG0553@2 NA|NA|NA KL SNF2 family N-terminal domain HGDHCNMN_03272 85643.Tmz1t_0689 1.5e-84 319.7 Rhodocyclales cobB2 ko:K12410 ko00000,ko01000 Bacteria 1MUK1@1224,2KUPH@206389,2VNKF@28216,COG0846@1,COG0846@2 NA|NA|NA K COG0846 NAD-dependent protein deacetylases, SIR2 family HGDHCNMN_03273 85643.Tmz1t_0231 3.5e-106 391.3 Rhodocyclales yafJ Bacteria 1MU1J@1224,2KVVH@206389,2VJP1@28216,COG0121@1,COG0121@2 NA|NA|NA S glutamine amidotransferase HGDHCNMN_03274 748247.AZKH_0126 1.7e-46 192.2 Rhodocyclales hit Bacteria 1MZVD@1224,2KWXK@206389,2VU7S@28216,COG0537@1,COG0537@2 NA|NA|NA FG Histidine triad (HIT) HGDHCNMN_03275 76114.ebA3023 2.8e-147 528.9 Rhodocyclales Bacteria 1PJYG@1224,2A8Z1@1,2KVGT@206389,2VJ83@28216,30Y2U@2 NA|NA|NA HGDHCNMN_03276 62928.azo0165 1.5e-133 483.0 Rhodocyclales phoR GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0016036,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0035556,GO:0036211,GO:0042578,GO:0042594,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071496,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 ko:K02484,ko:K07636 ko02020,map02020 M00434 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MWF3@1224,2KVEJ@206389,2VIBV@28216,COG5002@1,COG5002@2 NA|NA|NA T Histidine kinase HGDHCNMN_03277 497321.C664_13914 4.9e-112 410.6 Rhodocyclales Bacteria 1MY2Z@1224,2KUNU@206389,2VIT4@28216,COG0745@1,COG0745@2 NA|NA|NA K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain HGDHCNMN_03278 497321.C664_13909 1.3e-56 225.7 Rhodocyclales Bacteria 1MZ5M@1224,2KWB0@206389,2VR9K@28216,COG3536@1,COG3536@2 NA|NA|NA S Protein of unknown function (DUF971) HGDHCNMN_03279 62928.azo0162 5.3e-117 427.2 Rhodocyclales ubiE GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0040007,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116,M00117 R04990,R04993,R06859,R08774,R09736 RC00003,RC01253,RC01662 ko00000,ko00001,ko00002,ko01000 iAF1260.b3833,iBWG_1329.BWG_3511,iE2348C_1286.E2348C_4147,iEC042_1314.EC042_4213,iEC55989_1330.EC55989_4310,iECDH10B_1368.ECDH10B_4024,iECDH1ME8569_1439.ECDH1ME8569_3712,iECH74115_1262.ECH74115_5274,iECIAI1_1343.ECIAI1_4028,iECIAI39_1322.ECIAI39_3162,iECO103_1326.ECO103_4330,iECO111_1330.ECO111_4661,iECO26_1355.ECO26_4752,iECSE_1348.ECSE_4121,iECSP_1301.ECSP_4888,iECUMN_1333.ECUMN_4359,iECW_1372.ECW_m4135,iECs_1301.ECs4763,iEKO11_1354.EKO11_4524,iETEC_1333.ETEC_4110,iEcDH1_1363.EcDH1_4146,iEcE24377_1341.EcE24377A_4354,iEcHS_1320.EcHS_A4057,iEcSMS35_1347.EcSMS35_4216,iEcolC_1368.EcolC_4175,iG2583_1286.G2583_4633,iJO1366.b3833,iJR904.b3833,iSBO_1134.SBO_3847,iSDY_1059.SDY_3910,iSFV_1184.SFV_3665,iSF_1195.SF3911,iSFxv_1172.SFxv_4263,iSSON_1240.SSON_4008,iS_1188.S3843,iSbBS512_1146.SbBS512_E4305,iUMNK88_1353.UMNK88_4663,iWFL_1372.ECW_m4135,iY75_1357.Y75_RS17910,iZ_1308.Z5355 Bacteria 1MX8I@1224,2KUUC@206389,2VHBM@28216,COG0500@1,COG2226@2 NA|NA|NA H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) HGDHCNMN_03280 76114.ebA3010 2.2e-38 165.6 Rhodocyclales yigP GO:0006082,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0019752,GO:0032150,GO:0042180,GO:0042181,GO:0043436,GO:0043648,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046417,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 ko:K03690 ko00000 Bacteria 1N314@1224,2KWVA@206389,2VU2B@28216,COG3165@1,COG3165@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_03281 1304883.KI912532_gene2375 1.1e-186 659.4 Rhodocyclales gdhA 1.4.1.3,1.4.1.4 ko:K00261,ko:K00262 ko00220,ko00250,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00471,map00910,map01100,map01200,map04217,map04964 M00740 R00243,R00248 RC00006,RC02799 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MUMF@1224,2KUWM@206389,2VIZ7@28216,COG0334@1,COG0334@2 NA|NA|NA E Belongs to the Glu Leu Phe Val dehydrogenases family HGDHCNMN_03282 1265313.HRUBRA_02112 1.3e-134 486.5 unclassified Gammaproteobacteria fadL ko:K06076 ko00000,ko02000 1.B.9 Bacteria 1JA5D@118884,1MV7W@1224,1RPTU@1236,COG2067@1,COG2067@2 NA|NA|NA I Outer membrane protein transport protein (OMPP1/FadL/TodX) HGDHCNMN_03283 543728.Vapar_5568 4.3e-37 161.0 Comamonadaceae ko:K07112 ko00000 Bacteria 1MZ3A@1224,2VSDD@28216,4AEJS@80864,COG2391@1,COG2391@2 NA|NA|NA S transporter component HGDHCNMN_03284 1177179.A11A3_11628 2.4e-32 145.2 Oceanospirillales ko:K07112 ko00000 Bacteria 1MZC0@1224,1S8UB@1236,1XKP8@135619,COG2391@1,COG2391@2 NA|NA|NA S Transporter Component HGDHCNMN_03285 1304883.KI912532_gene2372 9.6e-98 363.2 Rhodocyclales ko:K07160 ko00000 Bacteria 1MUYV@1224,2KVRH@206389,2VKKP@28216,COG1540@1,COG1540@2 NA|NA|NA S Belongs to the UPF0271 (lamB) family HGDHCNMN_03286 748247.AZKH_3501 2.9e-84 318.9 Rhodocyclales kipA 3.5.1.54 ko:K01457 ko00220,ko00791,ko01100,ko01120,map00220,map00791,map01100,map01120 R00005 RC02756 ko00000,ko00001,ko01000 Bacteria 1MU9H@1224,2KWI2@206389,2VNJE@28216,COG1984@1,COG1984@2 NA|NA|NA E Allophanate hydrolase subunit 2 HGDHCNMN_03288 748247.AZKH_3502 9.2e-71 273.5 Rhodocyclales kipI 3.5.1.54 ko:K01457,ko:K06351,ko:K07160 ko00220,ko00791,ko01100,ko01120,map00220,map00791,map01100,map01120 R00005 RC02756 ko00000,ko00001,ko01000 Bacteria 1MWRB@1224,2KWK3@206389,2VQQM@28216,COG2049@1,COG2049@2 NA|NA|NA E Allophanate hydrolase subunit 1 HGDHCNMN_03289 497321.C664_13112 1.6e-72 279.3 Rhodocyclales Bacteria 1RA5I@1224,2C8XG@1,2KW73@206389,2VQGY@28216,2Z7PK@2 NA|NA|NA S Protein of unknown function (DUF4197) HGDHCNMN_03290 757424.Hsero_4673 1e-44 186.4 Oxalobacteraceae resA Bacteria 1RDGI@1224,2VT2S@28216,47435@75682,COG0526@1,COG0526@2 NA|NA|NA CO Thioredoxin-like HGDHCNMN_03291 1000565.METUNv1_03020 8.1e-86 324.3 Betaproteobacteria ko:K01993,ko:K02005 ko00000 Bacteria 1QW95@1224,2WI8S@28216,COG1566@1,COG1566@2 NA|NA|NA V Barrel-sandwich domain of CusB or HlyD membrane-fusion HGDHCNMN_03292 1000565.METUNv1_03021 1.4e-143 516.2 Rhodocyclales ko:K09808 ko02010,map02010 M00255 ko00000,ko00001,ko00002,ko02000 3.A.1.125 Bacteria 1Q2BY@1224,2KVZT@206389,2VHS2@28216,COG4591@1,COG4591@2 NA|NA|NA M MacB-like periplasmic core domain HGDHCNMN_03293 1000565.METUNv1_03022 7.9e-86 323.6 Rhodocyclales lolD ko:K09810 ko02010,map02010 M00255 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.125 Bacteria 1MVSQ@1224,2KVA1@206389,2WEGN@28216,COG1136@1,COG1136@2 NA|NA|NA P Part of the ABC transporter complex LolCDE involved in the translocation of HGDHCNMN_03294 342113.DM82_5351 1.2e-204 719.5 Burkholderiaceae ybaL ko:K03455 ko00000 2.A.37 Bacteria 1KIDV@119060,1MV34@1224,2VHSM@28216,COG1226@1,COG1226@2,COG4651@1,COG4651@2 NA|NA|NA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family HGDHCNMN_03295 1437824.BN940_15496 8.5e-44 183.3 Alcaligenaceae Bacteria 1N0QT@1224,2VU9R@28216,3T4NT@506,COG1846@1,COG1846@2 NA|NA|NA K transcriptional HGDHCNMN_03296 1123367.C666_06540 9e-25 119.0 Rhodocyclales Bacteria 1N95V@1224,2KYVZ@206389,2VVYB@28216,COG3945@1,COG3945@2 NA|NA|NA S Hemerythrin HHE cation binding HGDHCNMN_03297 305700.B447_01251 1.3e-143 516.2 Rhodocyclales hcaT ko:K05820 ko00000,ko02000 2.A.1.27 Bacteria 1MVZI@1224,2KV5D@206389,2VHWT@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HGDHCNMN_03298 62928.azo1038 3.1e-105 388.3 Rhodocyclales Bacteria 1MUNA@1224,2KVMZ@206389,2VHTB@28216,COG0501@1,COG0501@2 NA|NA|NA O Peptidase M48 HGDHCNMN_03299 118168.MC7420_787 1.6e-40 173.7 Oscillatoriales ko:K09989 ko00000 Bacteria 1GC16@1117,1HESE@1150,COG3825@1,COG3825@2 NA|NA|NA S VWA domain containing CoxE-like protein HGDHCNMN_03300 1304872.JAGC01000009_gene1548 2.3e-48 199.5 Desulfovibrionales Bacteria 1PN8I@1224,2MFER@213115,2X9RR@28221,43750@68525,COG0714@1,COG0714@2 NA|NA|NA S AAA domain (Cdc48 subfamily) HGDHCNMN_03301 1288494.EBAPG3_28930 2.2e-133 482.3 Betaproteobacteria ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MWBK@1224,2VNEP@28216,COG0577@1,COG0577@2 NA|NA|NA V MacB-like periplasmic core domain HGDHCNMN_03302 640081.Dsui_1467 1.4e-140 506.1 Proteobacteria ko:K02004,ko:K09808 ko02010,map02010 M00255,M00258 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.125 Bacteria 1QVRH@1224,COG4591@1,COG4591@2 NA|NA|NA M COG0577 ABC-type antimicrobial peptide transport system, permease component HGDHCNMN_03304 1472716.KBK24_0123985 1.6e-75 290.4 Burkholderiaceae 2.4.1.109 ko:K00728 ko00514,ko00515,ko01100,map00514,map00515,map01100 R04072,R07620,R11399 RC00005,RC00059,RC00397 ko00000,ko00001,ko01000,ko01003 GT39 Bacteria 1KC68@119060,1RBY3@1224,2W6P2@28216,COG1928@1,COG1928@2 NA|NA|NA O C-terminal four TMM region of protein-O-mannosyltransferase HGDHCNMN_03305 62928.azo3145 1e-108 399.8 Rhodocyclales panC GO:0003674,GO:0003824,GO:0004592,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 ko:K01918 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R02473 RC00096,RC00141 ko00000,ko00001,ko00002,ko01000 iECH74115_1262.ECH74115_0142,iECSP_1301.ECSP_0134,iECs_1301.ECs0137,iG2583_1286.G2583_0137,iZ_1308.Z0144 Bacteria 1MV1S@1224,2KV4C@206389,2VHF1@28216,COG0414@1,COG0414@2 NA|NA|NA H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate HGDHCNMN_03306 62928.azo3144 1.1e-120 439.5 Rhodocyclales panB 2.1.2.11 ko:K00606 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R01226 RC00022,RC00200 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU3B@1224,2KU6F@206389,2VHZ0@28216,COG0413@1,COG0413@2 NA|NA|NA H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate HGDHCNMN_03307 76114.ebA7118 3.2e-78 298.1 Rhodocyclales dgk 2.7.1.113 ko:K15518 ko00230,map00230 R01967 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1RC50@1224,2KW52@206389,2VQ8U@28216,COG1428@1,COG1428@2 NA|NA|NA F Deoxynucleoside kinase HGDHCNMN_03308 85643.Tmz1t_2764 4.2e-45 187.2 Rhodocyclales ko:K09922 ko00000 Bacteria 1RHBQ@1224,2KWRH@206389,2VSWS@28216,COG3169@1,COG3169@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_03309 1121035.AUCH01000005_gene227 8.2e-45 186.8 Rhodocyclales folK GO:0000287,GO:0003674,GO:0003824,GO:0003848,GO:0005488,GO:0016740,GO:0016772,GO:0016778,GO:0043167,GO:0043169,GO:0046872 2.7.6.3,4.1.2.25 ko:K00950,ko:K13940 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503,R03504 RC00002,RC00017,RC00721,RC00943 ko00000,ko00001,ko00002,ko01000 iECDH1ME8569_1439.ECDH1ME8569_0136,iEcDH1_1363.EcDH1_3460,iJN746.PP_4698,iSBO_1134.SBO_0131 Bacteria 1MZH8@1224,2KWMK@206389,2VSE2@28216,COG0801@1,COG0801@2 NA|NA|NA H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine HGDHCNMN_03310 1123367.C666_12495 6.4e-93 347.1 Rhodocyclales pcnB GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004652,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006276,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0031123,GO:0031124,GO:0034641,GO:0043170,GO:0043412,GO:0043631,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070566,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 Bacteria 1MVCS@1224,2KV46@206389,2VHY5@28216,COG0617@1,COG0617@2 NA|NA|NA H Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control HGDHCNMN_03311 76114.ebA6665 1.9e-30 139.0 Rhodocyclales ppiD GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0008150,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0061077,GO:0071575,GO:0071944,GO:0098552 5.2.1.8 ko:K01802,ko:K03769,ko:K03770 ko00000,ko01000,ko03110 Bacteria 1MWV0@1224,2KUWP@206389,2VJCZ@28216,COG0760@1,COG0760@2 NA|NA|NA O peptidylprolyl isomerase HGDHCNMN_03312 535289.Dtpsy_2674 1.2e-249 869.4 Comamonadaceae phoX ko:K07093 ko00000 Bacteria 1MU8T@1224,2VK2V@28216,4ACNJ@80864,COG3211@1,COG3211@2 NA|NA|NA S Bacterial protein of unknown function (DUF839) HGDHCNMN_03313 1348657.M622_01830 2.2e-45 188.7 Rhodocyclales Bacteria 1RI0A@1224,2KWKC@206389,2VT2H@28216,COG5490@1,COG5490@2 NA|NA|NA S Phasin protein HGDHCNMN_03314 62928.azo2446 5.2e-196 690.6 Rhodocyclales Bacteria 1NU8B@1224,2KUEW@206389,2VIKD@28216,COG3829@1,COG3829@2 NA|NA|NA K Fis family transcriptional regulator HGDHCNMN_03315 497321.C664_02340 1.5e-29 135.6 Rhodocyclales paaE ko:K02613 ko00360,ko01120,map00360,map01120 R09838 RC02690 ko00000,ko00001 Bacteria 1NA1K@1224,2KZUC@206389,2VVGS@28216,COG1018@1,COG1018@2 NA|NA|NA C 2Fe-2S iron-sulfur cluster binding domain HGDHCNMN_03316 85643.Tmz1t_3116 2.7e-23 114.4 Rhodocyclales tomA0 ko:K16249 ko00361,ko00362,ko00623,ko01100,ko01120,ko01220,map00361,map00362,map00623,map01100,map01120,map01220 M00548 R03560,R03608,R10042,R10043 RC00046,RC00490 ko00000,ko00001,ko00002 Bacteria 1NGP7@1224,2C44J@1,2KZ6E@206389,2VXRT@28216,33BV7@2 NA|NA|NA S Phenol hydroxylase subunit HGDHCNMN_03317 1123367.C666_13605 2.1e-169 601.7 Rhodocyclales ko:K16243 ko00361,ko00362,ko00623,ko01100,ko01120,ko01220,map00361,map00362,map00623,map01100,map01120,map01220 M00548 R03560,R03608,R10042,R10043 RC00046,RC00490 ko00000,ko00001,ko00002 Bacteria 1MZFV@1224,2DB9W@1,2KVEW@206389,2VHWP@28216,2Z7Z9@2 NA|NA|NA C Methane/Phenol/Toluene Hydroxylase HGDHCNMN_03318 1123367.C666_13600 1.5e-37 161.8 Betaproteobacteria ko:K16244 ko00361,ko00362,ko00623,ko01100,ko01120,ko01220,map00361,map00362,map00623,map01100,map01120,map01220 M00548 R03560,R03608,R10042,R10043 RC00046,RC00490 ko00000,ko00001,ko00002 Bacteria 1N03Q@1224,2CJVU@1,2VUNQ@28216,32S7J@2 NA|NA|NA C PFAM monooxygenase component MmoB DmpM HGDHCNMN_03319 1159870.KB907784_gene210 6.9e-19 99.8 Alcaligenaceae ko:K07043 ko00000 Bacteria 1MXZU@1224,2VNC5@28216,3T378@506,COG1451@1,COG1451@2 NA|NA|NA S Protein of unknown function DUF45 HGDHCNMN_03320 497321.C664_10328 3.1e-161 574.7 Rhodocyclales proB GO:0003674,GO:0003824,GO:0004349,GO:0004350,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016772,GO:0016774,GO:0016903,GO:0018130,GO:0019202,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 M00015 R00239 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_3198 Bacteria 1MUBG@1224,2KUDX@206389,2VISR@28216,COG0263@1,COG0263@2 NA|NA|NA F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate HGDHCNMN_03321 85643.Tmz1t_1631 3.4e-158 564.7 Rhodocyclales obg GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007059,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022607,GO:0022611,GO:0022613,GO:0022618,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0043021,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0065003,GO:0065007,GO:0070925,GO:0071826,GO:0071840,GO:0090069,GO:0090071,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03979 ko00000,ko01000,ko03009 Bacteria 1MUGZ@1224,2KUQC@206389,2VIM2@28216,COG0536@1,COG0536@2 NA|NA|NA S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control HGDHCNMN_03322 76114.ebC2 2.1e-36 157.9 Rhodocyclales rpmA GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 ko:K02899 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZGH@1224,2KX43@206389,2VU4W@28216,COG0211@1,COG0211@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL27 family HGDHCNMN_03323 76114.ebB22 7.8e-46 189.5 Rhodocyclales rplU GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02888 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZEW@1224,2KWM1@206389,2VSHZ@28216,COG0261@1,COG0261@2 NA|NA|NA J This protein binds to 23S rRNA in the presence of protein L20 HGDHCNMN_03324 391587.KAOT1_03332 1.3e-25 124.4 Bacteria Bacteria 2EEG2@1,3389X@2 NA|NA|NA HGDHCNMN_03325 1005395.CSV86_29032 3e-57 228.8 Gammaproteobacteria ko:K07039,ko:K09858 ko00000 Bacteria 1QU5B@1224,1T24K@1236,COG3012@1,COG3012@2 NA|NA|NA S Plasmid pRiA4b ORF-3-like protein HGDHCNMN_03326 85643.Tmz1t_0278 9.6e-55 219.9 Betaproteobacteria ko:K07484 ko00000 Bacteria 1MUCX@1224,2WGN9@28216,COG4372@1,COG4372@2 NA|NA|NA S transposase IS66 HGDHCNMN_03327 365044.Pnap_3904 5.8e-39 166.4 Comamonadaceae yoeB ko:K19158 ko00000,ko01000,ko02048 Bacteria 1MZBP@1224,2VX6B@28216,4AFV3@80864,COG4115@1,COG4115@2 NA|NA|NA S YoeB-like toxin of bacterial type II toxin-antitoxin system HGDHCNMN_03328 365044.Pnap_3905 1.6e-29 135.2 Comamonadaceae 2.3.1.15 ko:K08591,ko:K19159 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004,ko02048 Bacteria 1N6X6@1224,2VXBD@28216,4AFVP@80864,COG2161@1,COG2161@2 NA|NA|NA D Antitoxin Phd_YefM, type II toxin-antitoxin system HGDHCNMN_03329 1121035.AUCH01000004_gene353 6.6e-272 943.0 Rhodocyclales Bacteria 1NF48@1224,2KYG0@206389,2VIN3@28216,COG0464@1,COG0464@2 NA|NA|NA O ATPase family associated with various cellular activities (AAA) HGDHCNMN_03330 159087.Daro_1459 7.2e-35 153.3 Rhodocyclales Bacteria 1N1MW@1224,2BWYB@1,2KX47@206389,2VUU1@28216,32W1H@2 NA|NA|NA HGDHCNMN_03331 159087.Daro_1458 4.8e-35 153.7 Rhodocyclales glpE 2.8.1.1,2.8.1.2 ko:K01011,ko:K02439,ko:K07390 ko00270,ko00920,ko01100,ko01110,ko01120,ko04122,map00270,map00920,map01100,map01110,map01120,map04122 R01931,R03105,R03106 RC00214 ko00000,ko00001,ko01000,ko03029,ko03110 Bacteria 1PXHI@1224,2KZ1D@206389,2WCXD@28216,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese Homology Domain HGDHCNMN_03332 159087.Daro_1457 1e-80 306.2 Rhodocyclales nifF ko:K03839 ko00000 Bacteria 1RBX5@1224,2KXQN@206389,2W1I9@28216,COG0716@1,COG0716@2 NA|NA|NA C Low-potential electron donor to a number of redox enzymes HGDHCNMN_03333 159087.Daro_1456 2e-23 114.8 Rhodocyclales Bacteria 1NH05@1224,2EMHW@1,2KXHG@206389,2VYV6@28216,33F6H@2 NA|NA|NA HGDHCNMN_03334 159087.Daro_1455 1.3e-115 422.5 Rhodocyclales nifY ko:K02585,ko:K02596 ko00000 Bacteria 1PW6J@1224,2KYDE@206389,2VNDT@28216,COG1433@1,COG1433@2 NA|NA|NA S Dinitrogenase iron-molybdenum cofactor, N-terminal HGDHCNMN_03335 159087.Daro_1422 3.9e-221 774.2 Rhodocyclales Bacteria 1Q0G9@1224,2KV77@206389,2VJBZ@28216,COG0778@1,COG0778@2 NA|NA|NA C Nitroreductase family HGDHCNMN_03336 159087.Daro_1423 1.2e-23 116.3 Rhodocyclales ko:K06867 ko00000 Bacteria 1QVCE@1224,2KYZ2@206389,2VUWR@28216,COG0666@1,COG0666@2 NA|NA|NA P Ankyrin repeats (many copies) HGDHCNMN_03337 85643.Tmz1t_1306 6.5e-142 510.8 Betaproteobacteria amaA 3.5.1.32 ko:K01436,ko:K01451 ko00360,map00360 R01424 RC00096,RC00162 ko00000,ko00001,ko01000,ko01002 Bacteria 1MUIV@1224,2VJJK@28216,COG1473@1,COG1473@2 NA|NA|NA S amidohydrolase HGDHCNMN_03338 1366050.N234_09495 9.6e-71 273.9 Burkholderiaceae ko:K14057 ko00000,ko03000 Bacteria 1K71D@119060,1R785@1224,2VJ38@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HGDHCNMN_03339 1123367.C666_12175 1.6e-35 155.6 Rhodocyclales yffB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 ko:K00537,ko:K16509 ko00000,ko01000 Bacteria 1MZ6S@1224,2KX1N@206389,2VUB7@28216,COG1393@1,COG1393@2 NA|NA|NA P Belongs to the ArsC family HGDHCNMN_03340 1123367.C666_12180 1.6e-96 359.4 Rhodocyclales hslO GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0006979,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0031647,GO:0036506,GO:0042026,GO:0042802,GO:0043167,GO:0043169,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0065007,GO:0065008 ko:K04083 ko00000,ko03110 Bacteria 1MUMU@1224,2KVFH@206389,2VI8B@28216,COG1281@1,COG1281@2 NA|NA|NA O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress HGDHCNMN_03341 62928.azo1656 1.4e-75 289.7 Rhodocyclales minC GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007346,GO:0008150,GO:0009987,GO:0010564,GO:0032465,GO:0032954,GO:0032955,GO:0042802,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051301,GO:0051302,GO:0051726,GO:0060187,GO:0065007,GO:1901891,GO:1902412,GO:1903436 ko:K03610,ko:K09749 ko00000,ko03036,ko04812 Bacteria 1RHVN@1224,2KWD0@206389,2VNVN@28216,COG0850@1,COG0850@2 NA|NA|NA D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization HGDHCNMN_03342 76114.ebA6838 1.4e-131 475.7 Rhodocyclales minD GO:0000166,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0007049,GO:0007059,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022402,GO:0030554,GO:0031224,GO:0031226,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036214,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051179,GO:0051301,GO:0051302,GO:0051782,GO:0060187,GO:0061640,GO:0065007,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 ko:K03609 ko00000,ko03036,ko04812 Bacteria 1MUEU@1224,2KV0W@206389,2VJFP@28216,COG2894@1,COG2894@2 NA|NA|NA D Belongs to the ParA family HGDHCNMN_03343 748247.AZKH_2205 1.3e-25 122.1 Rhodocyclales minE GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000918,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0007049,GO:0007346,GO:0008150,GO:0009987,GO:0010564,GO:0016020,GO:0016043,GO:0022402,GO:0022607,GO:0032465,GO:0032506,GO:0032954,GO:0032955,GO:0042802,GO:0044085,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051301,GO:0051302,GO:0051726,GO:0061640,GO:0065007,GO:0071840,GO:0071944,GO:0090529,GO:1901891,GO:1902410,GO:1902412,GO:1903047,GO:1903436 ko:K03608 ko00000,ko03036,ko04812 Bacteria 1N6QD@1224,2KX3N@206389,2VTX1@28216,COG0851@1,COG0851@2 NA|NA|NA D Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell HGDHCNMN_03345 62928.azo1652 7.5e-36 156.8 Rhodocyclales MA20_39715 Bacteria 1MZN2@1224,2KX28@206389,2VSCN@28216,COG5319@1,COG5319@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_03346 84531.JMTZ01000167_gene413 6.2e-102 377.5 Gammaproteobacteria Bacteria 1NT2G@1224,1SRVC@1236,2DUXH@1,33SVG@2 NA|NA|NA S Fungal chitosanase of glycosyl hydrolase group 75 HGDHCNMN_03348 1458427.BAWN01000015_gene940 1.6e-81 308.9 Comamonadaceae wrbA 1.6.5.2 ko:K03809 ko00130,ko01110,map00130,map01110 R02964,R03643,R03816 RC00819 ko00000,ko00001,ko01000 Bacteria 1MW7N@1224,2VK49@28216,4ABT7@80864,COG0655@1,COG0655@2 NA|NA|NA S flavodoxin nitric oxide synthase HGDHCNMN_03349 535289.Dtpsy_1785 1.2e-99 369.4 Comamonadaceae yhhW_2 ko:K06911 ko00000 Bacteria 1MVSW@1224,2VHPA@28216,4AC8J@80864,COG1741@1,COG1741@2 NA|NA|NA S Belongs to the pirin family HGDHCNMN_03350 338969.Rfer_1907 4.3e-111 407.9 Comamonadaceae allS_2 Bacteria 1MZTA@1224,2VJTZ@28216,4A9RY@80864,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_03351 85643.Tmz1t_1794 7.8e-104 383.6 Rhodocyclales dcsG 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV29@1224,2KYM6@206389,2WAT8@28216,COG0189@1,COG0189@2 NA|NA|NA HJ Prokaryotic glutathione synthetase, ATP-grasp domain HGDHCNMN_03353 1123392.AQWL01000005_gene3212 7e-53 213.4 Hydrogenophilales 1.3.98.1 ko:K00226 ko00240,ko01100,map00240,map01100 M00051 R01867 RC00051 ko00000,ko00001,ko00002,ko01000 Bacteria 1KSMP@119069,1MXER@1224,2VK6N@28216,COG0167@1,COG0167@2 NA|NA|NA F Dihydroorotate dehydrogenase HGDHCNMN_03354 420324.KI912039_gene2227 1.3e-86 326.2 Methylobacteriaceae recD 3.1.11.5 ko:K01144,ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1JTJN@119045,1MW43@1224,2TVG8@28211,COG0507@1,COG0507@2 NA|NA|NA L Helix-hairpin-helix containing domain HGDHCNMN_03355 402626.Rpic_1020 2e-13 81.6 Burkholderiaceae ko:K07497 ko00000 Bacteria 1K4P1@119060,1PUMN@1224,2VKGM@28216,COG2801@1,COG2801@2 NA|NA|NA L PFAM Integrase catalytic region HGDHCNMN_03357 62928.azo0428 4.5e-196 690.6 Rhodocyclales cysN GO:0000103,GO:0003674,GO:0003824,GO:0004020,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006790,GO:0006793,GO:0006796,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009336,GO:0009605,GO:0009987,GO:0009991,GO:0010134,GO:0010438,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019419,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0034599,GO:0040007,GO:0042221,GO:0042594,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0061695,GO:0070887,GO:0071496,GO:0071944,GO:1902494,GO:1902503,GO:1990234 2.7.1.25,2.7.7.4 ko:K00955,ko:K00956 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176,M00596 R00509,R00529,R04928,R04929 RC00002,RC00078,RC02809,RC02889 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUD9@1224,2KUYT@206389,2VHYV@28216,COG2895@1,COG2895@2 NA|NA|NA H Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily HGDHCNMN_03358 748247.AZKH_4285 8.1e-171 606.3 Rhodocyclales cysD 1.8.4.10,1.8.4.8,2.7.7.4 ko:K00390,ko:K00957 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176,M00596 R00529,R02021,R04929 RC00007,RC02809,RC02862,RC02889 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUCZ@1224,2KUTB@206389,2VJH9@28216,COG0175@1,COG0175@2 NA|NA|NA H COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase and related enzymes HGDHCNMN_03359 1122236.KB905141_gene1245 3.9e-96 357.8 Nitrosomonadales cysH GO:0003674,GO:0003824,GO:0004604,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016671,GO:0044424,GO:0044464,GO:0055114 1.7.7.1,1.8.4.10,1.8.4.8,2.7.1.25 ko:K00366,ko:K00390,ko:K00860 ko00230,ko00910,ko00920,ko01100,ko01120,map00230,map00910,map00920,map01100,map01120 M00176,M00531 R00509,R00790,R02021,R04928 RC00002,RC00007,RC00078,RC00176,RC02862 ko00000,ko00001,ko00002,ko01000 Bacteria 1MXUR@1224,2KMCD@206350,2VIR0@28216,COG0175@1,COG0175@2 NA|NA|NA EH Reduction of activated sulfate into sulfite HGDHCNMN_03360 62928.azo0431 4.5e-54 217.6 Rhodocyclales MA20_18215 1.8.4.10,1.8.4.8 ko:K00390 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00176 R02021 RC00007,RC02862 ko00000,ko00001,ko00002,ko01000 Bacteria 1RJR9@1224,2KWPT@206389,2VSQB@28216,COG3749@1,COG3749@2 NA|NA|NA S Bacterial protein of unknown function (DUF934) HGDHCNMN_03361 62928.azo0432 2.8e-151 541.6 Rhodocyclales sir 1.7.1.15,1.7.7.1,1.8.1.2,1.8.7.1 ko:K00362,ko:K00366,ko:K00381,ko:K00392 ko00910,ko00920,ko01100,ko01120,map00910,map00920,map01100,map01120 M00176,M00530,M00531 R00787,R00790,R00858,R00859,R03600 RC00065,RC00176 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVVB@1224,2KU69@206389,2VIYX@28216,COG0155@1,COG0155@2 NA|NA|NA C Sulfite reductase HGDHCNMN_03362 1000565.METUNv1_00429 6.1e-25 120.6 Rhodocyclales yidB Bacteria 1N7FF@1224,2KZ92@206389,2VVTK@28216,COG3753@1,COG3753@2 NA|NA|NA S Bacterial protein of unknown function (DUF937) HGDHCNMN_03363 497321.C664_14878 9.3e-89 333.2 Rhodocyclales rpiA GO:0003674,GO:0003824,GO:0004751,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0042802,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 5.3.1.6 ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167,M00580 R01056 RC00434 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVGR@1224,2KUHS@206389,2VH27@28216,COG0120@1,COG0120@2 NA|NA|NA G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate HGDHCNMN_03364 580332.Slit_2732 4.2e-74 284.6 Nitrosomonadales phoU GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 ko:K02039 ko00000 Bacteria 1MUMI@1224,2VI2C@28216,44UZR@713636,COG0704@1,COG0704@2 NA|NA|NA P Plays a role in the regulation of phosphate uptake HGDHCNMN_03365 1123367.C666_02410 6.1e-179 633.6 Rhodocyclales dapC 2.6.1.11,2.6.1.17 ko:K00821,ko:K14267 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MWS8@1224,2KVDP@206389,2VIEP@28216,COG0436@1,COG0436@2 NA|NA|NA E PFAM Aminotransferase class I and II HGDHCNMN_03366 1121004.ATVC01000069_gene1652 2e-107 395.6 Neisseriales dapD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008666,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.117,2.3.1.89 ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 M00016,M00525 R04364,R04365 RC00004,RC01136 ko00000,ko00001,ko00002,ko01000 iSbBS512_1146.SbBS512_E0158,iYO844.BSU14180 Bacteria 1MU0Y@1224,2KPPE@206351,2VHUX@28216,COG2171@1,COG2171@2 NA|NA|NA E Belongs to the transferase hexapeptide repeat family HGDHCNMN_03367 62928.azo2006 9.8e-166 589.7 Rhodocyclales uptC ko:K02670 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1QTTX@1224,2KVCM@206389,2VHU7@28216,COG5008@1,COG5008@2 NA|NA|NA NU twitching motility protein HGDHCNMN_03368 62928.azo2007 1.7e-151 542.3 Rhodocyclales dapE GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009014,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0032153,GO:0042802,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0046872,GO:0046914,GO:0050897,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.1.18 ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R02734 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_2485,iIT341.HP0212 Bacteria 1MW6G@1224,2KUDN@206389,2VHRF@28216,COG0624@1,COG0624@2 NA|NA|NA E Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls HGDHCNMN_03371 1100720.ALKN01000007_gene2992 7.3e-26 123.2 Comamonadaceae Bacteria 1N75D@1224,2VU3E@28216,4AJJ4@80864,COG3636@1,COG3636@2 NA|NA|NA K addiction module antidote protein HGDHCNMN_03372 331678.Cphamn1_0723 1e-24 119.4 Bacteria Bacteria COG3620@1,COG3620@2 NA|NA|NA K sequence-specific DNA binding HGDHCNMN_03373 331678.Cphamn1_0724 1.6e-33 148.7 Bacteria Bacteria COG4679@1,COG4679@2 NA|NA|NA K PFAM Phage derived protein Gp49-like (DUF891) HGDHCNMN_03374 76114.ebA220 6e-133 481.1 Rhodocyclales intF GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0050896 Bacteria 1N2H9@1224,2KUY2@206389,2VICV@28216,COG0582@1,COG0582@2 NA|NA|NA L Arm DNA-binding domain HGDHCNMN_03375 1123367.C666_01355 3e-114 418.7 Rhodocyclales rluB GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 ko:K06178 ko00000,ko01000,ko03009 Bacteria 1MUCE@1224,2KUDH@206389,2VITB@28216,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family HGDHCNMN_03376 748247.AZKH_2249 3.9e-56 224.2 Rhodocyclales rimP GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576 ko:K09748 ko00000,ko03009 Bacteria 1RDP2@1224,2KWCE@206389,2VSRT@28216,COG0779@1,COG0779@2 NA|NA|NA J Required for maturation of 30S ribosomal subunits HGDHCNMN_03377 748247.AZKH_2250 2.3e-212 745.0 Rhodocyclales nusA GO:0001000,GO:0001121,GO:0001125,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 ko:K02600 ko00000,ko03009,ko03021 Bacteria 1MWT7@1224,2KVE3@206389,2VH2X@28216,COG0195@1,COG0195@2 NA|NA|NA K Participates in both transcription termination and antitermination HGDHCNMN_03379 443152.MDG893_04057 7.5e-58 231.5 Gammaproteobacteria Bacteria 1NSHD@1224,1SJX5@1236,2EZFV@1,33SM2@2 NA|NA|NA HGDHCNMN_03380 1266925.JHVX01000007_gene2377 5.9e-34 149.8 Nitrosomonadales rpsO GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02956 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZ2W@1224,2VU1D@28216,373G3@32003,COG0184@1,COG0184@2 NA|NA|NA J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome HGDHCNMN_03381 76114.ebA5843 3.9e-93 348.2 Rhodocyclales truB GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 ko:K03177 ko00000,ko01000,ko03016 Bacteria 1MV0N@1224,2KVRT@206389,2VH97@28216,COG0130@1,COG0130@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs HGDHCNMN_03382 76114.ebA5842 4.3e-47 194.1 Rhodocyclales rbfA GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071840,GO:0090304,GO:1901360 ko:K02834 ko00000,ko03009 Bacteria 1MZPE@1224,2KWPI@206389,2VR43@28216,COG0858@1,COG0858@2 NA|NA|NA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA HGDHCNMN_03383 76114.ebA5841 7.7e-47 193.0 Rhodocyclales infB GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0036094,GO:0043021,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02519 ko00000,ko03012,ko03029 Bacteria 1MV26@1224,2KV2V@206389,2VK2H@28216,COG0532@1,COG0532@2 NA|NA|NA J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex HGDHCNMN_03384 1569209.BBPH01000075_gene783 3.9e-25 121.7 Paracoccus arsB GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015104,GO:0015105,GO:0015291,GO:0015297,GO:0015318,GO:0015698,GO:0015699,GO:0015700,GO:0016020,GO:0022804,GO:0022857,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656 ko:K03325 ko00000,ko02000 2.A.59 Bacteria 1MUXY@1224,2PVRY@265,2TSVJ@28211,COG0798@1,COG0798@2 NA|NA|NA P Sodium Bile acid symporter family HGDHCNMN_03385 62928.azo3732 7.8e-157 560.1 Rhodocyclales livM ko:K01995,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MV66@1224,2KU9H@206389,2VH43@28216,COG4177@1,COG4177@2 NA|NA|NA E Belongs to the binding-protein-dependent transport system permease family HGDHCNMN_03386 85643.Tmz1t_2472 2.6e-97 361.7 Rhodocyclales livH ko:K01997 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MU25@1224,2KUUP@206389,2VJAS@28216,COG0559@1,COG0559@2 NA|NA|NA E Belongs to the binding-protein-dependent transport system permease family HGDHCNMN_03387 1163408.UU9_06789 4.1e-31 140.6 Gammaproteobacteria 1.9.3.1 ko:K00404 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002,ko01000 3.D.4.3 Bacteria 1MU18@1224,1RM7I@1236,COG3278@1,COG3278@2 NA|NA|NA C Belongs to the heme-copper respiratory oxidase family HGDHCNMN_03388 670307.HYPDE_34873 3.1e-11 73.6 Alphaproteobacteria ko:K00405 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002 3.D.4.3 Bacteria 1MXEY@1224,2VFE3@28211,COG2010@1,COG2010@2,COG2993@1,COG2993@2 NA|NA|NA C Cytochrome C oxidase, mono-heme subunit/FixO HGDHCNMN_03389 62928.azo1410 4.7e-13 80.1 Rhodocyclales nudF 3.6.1.13 ko:K01515 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000 iHN637.CLJU_RS05505,iSB619.SA_RS07540,iYO844.BSU23610 Bacteria 1RCX7@1224,2KWAR@206389,2VRU5@28216,COG0494@1,COG0494@2 NA|NA|NA L COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes HGDHCNMN_03390 1123487.KB892868_gene1149 7.5e-44 184.1 Betaproteobacteria Bacteria 1NPCK@1224,2C845@1,2W63X@28216,33NTC@2 NA|NA|NA HGDHCNMN_03391 1009370.ALO_09449 1.9e-10 73.6 Bacteria Bacteria COG4642@1,COG4642@2 NA|NA|NA S regulation of ryanodine-sensitive calcium-release channel activity HGDHCNMN_03392 305700.B447_05583 5.2e-37 161.0 Rhodocyclales Cj0418c Bacteria 1MZUF@1224,2KWWH@206389,2VTY6@28216,COG3064@1,COG3064@2 NA|NA|NA M SprA-related family HGDHCNMN_03393 338969.Rfer_1047 1.8e-44 186.0 Betaproteobacteria Bacteria 1QVSN@1224,2DMCF@1,2VVT8@28216,32JPI@2 NA|NA|NA S PEP-CTERM motif HGDHCNMN_03394 1123487.KB892834_gene2713 8.8e-101 373.2 Rhodocyclales livF ko:K01996 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MVVC@1224,2KU8C@206389,2VHYN@28216,COG0410@1,COG0410@2 NA|NA|NA E ABC-type branched-chain amino acid transport systems, ATPase component HGDHCNMN_03395 1123487.KB892834_gene2712 5.9e-114 417.2 Rhodocyclales livG ko:K01995,ko:K01996 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MUTY@1224,2KVIX@206389,2VJM6@28216,COG0411@1,COG0411@2 NA|NA|NA E branched-chain amino acid HGDHCNMN_03396 1408164.MOLA814_00788 3.9e-53 214.5 unclassified Betaproteobacteria livM ko:K01995,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1KQDQ@119066,1MV66@1224,2VH43@28216,COG4177@1,COG4177@2 NA|NA|NA U Branched-chain amino acid transport system / permease component HGDHCNMN_03397 246197.MXAN_5604 2.7e-29 135.2 Myxococcales murG GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0050511,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.227 ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011 GT28 iLJ478.TM0232,iSFV_1184.SFV_0083,iSF_1195.SF0087,iSFxv_1172.SFxv_0091,iS_1188.S0089 Bacteria 1MVIB@1224,2WJNY@28221,2YWEZ@29,42ME1@68525,COG0707@1,COG0707@2 NA|NA|NA M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) HGDHCNMN_03398 62928.azo0722 1.7e-209 735.3 Rhodocyclales dnaB GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Bacteria 1MUG9@1224,2KU6Y@206389,2VIKN@28216,COG0305@1,COG0305@2 NA|NA|NA L it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins HGDHCNMN_03399 497321.C664_17922 2.5e-53 214.9 Rhodocyclales rplI GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02939 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RD0R@1224,2KWBY@206389,2VR40@28216,COG0359@1,COG0359@2 NA|NA|NA J binds to the 23S rRNA HGDHCNMN_03400 1123367.C666_17140 3.3e-37 160.6 Rhodocyclales rpsR GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02963 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZ8U@1224,2KWXF@206389,2VTWT@28216,COG0238@1,COG0238@2 NA|NA|NA J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit HGDHCNMN_03401 159087.Daro_1217 8.7e-20 102.8 Rhodocyclales priB GO:0000228,GO:0000428,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005658,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006270,GO:0006276,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0016070,GO:0018130,GO:0019438,GO:0030880,GO:0030894,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0043601,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0050896,GO:0055029,GO:0061695,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990077,GO:1990099,GO:1990234,GO:1990837 ko:K02686 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 1N98W@1224,2KX33@206389,2VVZ4@28216,COG2965@1,COG2965@2 NA|NA|NA L Binds single-stranded DNA at the primosome assembly site (PAS) HGDHCNMN_03402 1123367.C666_17150 1.4e-52 212.2 Rhodocyclales rpsF GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 4.3.1.19 ko:K01754,ko:K02990 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,ko03010,map00260,map00290,map01100,map01110,map01130,map01200,map01230,map03010 M00178,M00570 R00220,R00996 RC00418,RC02600 br01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03029 Bacteria 1RH82@1224,2KWGN@206389,2VR79@28216,COG0360@1,COG0360@2 NA|NA|NA J Binds together with S18 to 16S ribosomal RNA HGDHCNMN_03404 76114.ebA165 2.2e-274 951.4 Rhodocyclales actP_1 ko:K14393 ko00000,ko02000 2.A.21.7 Bacteria 1MVJ8@1224,2KUJR@206389,2VH3P@28216,COG4147@1,COG4147@2 NA|NA|NA S Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family HGDHCNMN_03405 159087.Daro_1638 3.1e-17 94.4 Rhodocyclales Bacteria 1NQBY@1224,2KXAM@206389,2VV4C@28216,COG4327@1,COG4327@2 NA|NA|NA S Domain of unknown function (DUF4212) HGDHCNMN_03406 404589.Anae109_2028 1.1e-115 423.7 Deltaproteobacteria ko:K07182 ko00000 Bacteria 1MW8U@1224,2WJF5@28221,42NAX@68525,COG2905@1,COG2905@2 NA|NA|NA T CBS domain containing protein HGDHCNMN_03407 62928.azo2410 2.5e-276 958.0 Rhodocyclales 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1QUVW@1224,2KUQR@206389,2VHZ3@28216,COG2176@1,COG2176@2 NA|NA|NA L DNA polymerase III HGDHCNMN_03408 62928.azo2411 2.2e-47 194.9 Rhodocyclales Bacteria 1RHCU@1224,2KWBT@206389,2VT7U@28216,COG0745@1,COG0745@2 NA|NA|NA T cheY-homologous receiver domain HGDHCNMN_03409 296591.Bpro_4149 9e-291 1006.1 Comamonadaceae 3.1.3.3 ko:K07315 ko00000,ko01000,ko03021 Bacteria 1MUY7@1224,2VKRS@28216,4AAXQ@80864,COG0591@1,COG0591@2,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_03410 497321.C664_10962 5.1e-62 244.2 Rhodocyclales grpE GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009986,GO:0009987,GO:0009991,GO:0016043,GO:0017076,GO:0019904,GO:0022607,GO:0030234,GO:0030246,GO:0030247,GO:0030312,GO:0030554,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0036094,GO:0040007,GO:0042594,GO:0042802,GO:0042803,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0050790,GO:0050896,GO:0051082,GO:0051716,GO:0060589,GO:0060590,GO:0065003,GO:0065007,GO:0065009,GO:0071496,GO:0071840,GO:0071944,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 ko:K03687 ko00000,ko03029,ko03110 Bacteria 1RH8T@1224,2KWC2@206389,2VSEQ@28216,COG0576@1,COG0576@2 NA|NA|NA O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ HGDHCNMN_03411 497321.C664_02670 3.5e-183 647.9 Rhodocyclales Bacteria 1MV1P@1224,2KUR5@206389,2VIE9@28216,COG0515@1,COG0515@2 NA|NA|NA KLT serine threonine protein kinase HGDHCNMN_03412 795666.MW7_0967 1e-51 209.5 Burkholderiaceae trxC 1.8.1.8 ko:K03672 ko00000,ko01000,ko03110 Bacteria 1KCBP@119060,1RHUA@1224,2VR2G@28216,COG3118@1,COG3118@2 NA|NA|NA O Thioredoxin HGDHCNMN_03413 1123487.KB892863_gene1961 2.7e-75 288.1 Rhodocyclales Bacteria 1NDT4@1224,2DPY2@1,2KXQT@206389,2WC4I@28216,333WA@2 NA|NA|NA S AP2 domain HGDHCNMN_03414 62928.azo2583 1.5e-34 152.1 Rhodocyclales yvlD ko:K08972 ko00000 Bacteria 1N1DF@1224,2KXEX@206389,2VUY1@28216,COG1950@1,COG1950@2 NA|NA|NA S Mycobacterial 4 TMS phage holin, superfamily IV HGDHCNMN_03415 305700.B447_17963 3.7e-151 541.2 Rhodocyclales hemH GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 ko:K01772 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R00310,R11329 RC01012 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVR1@1224,2KUQE@206389,2VH7Z@28216,COG0276@1,COG0276@2 NA|NA|NA H Catalyzes the ferrous insertion into protoporphyrin IX HGDHCNMN_03416 1123367.C666_03255 4.4e-146 524.2 Rhodocyclales hrcA GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K03705 ko00000,ko03000 Bacteria 1MVX4@1224,2KUP3@206389,2VHCK@28216,COG1420@1,COG1420@2 NA|NA|NA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons HGDHCNMN_03417 76114.ebA4805 1.3e-128 466.1 Rhodocyclales nadK GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 ko:K00858 ko00760,ko01100,map00760,map01100 R00104 RC00002,RC00078 ko00000,ko00001,ko01000 iEcSMS35_1347.EcSMS35_2767,iHN637.CLJU_RS05480,iLJ478.TM1733,iSB619.SA_RS04895 Bacteria 1MUBC@1224,2KV3J@206389,2VIV0@28216,COG0061@1,COG0061@2 NA|NA|NA F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP HGDHCNMN_03418 76114.ebA4808 4.3e-191 674.5 Rhodocyclales recN GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 ko:K03631 ko00000,ko03400 Bacteria 1MUNP@1224,2KUDS@206389,2VHHA@28216,COG0497@1,COG0497@2 NA|NA|NA L May be involved in recombinational repair of damaged DNA HGDHCNMN_03419 640081.Dsui_3069 2.4e-64 251.9 Rhodocyclales IV02_13550 Bacteria 1RDDV@1224,2KW4E@206389,2VQ6X@28216,COG2119@1,COG2119@2 NA|NA|NA S membrane HGDHCNMN_03420 748247.AZKH_3085 1.6e-63 248.8 Rhodocyclales fur ko:K03711 ko00000,ko03000 Bacteria 1RDWJ@1224,2KWB1@206389,2VR52@28216,COG0735@1,COG0735@2 NA|NA|NA K Belongs to the Fur family HGDHCNMN_03421 748247.AZKH_3084 1e-31 142.9 Rhodocyclales bamE ko:K06186 ko00000,ko02000 1.B.33.1 Bacteria 1N6YW@1224,2KX54@206389,2VRC6@28216,COG2913@1,COG2913@2 NA|NA|NA M Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane HGDHCNMN_03422 85643.Tmz1t_1729 2.8e-111 408.3 Rhodocyclales dapB GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.17.1.8 ko:K00215,ko:K03546 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R04198,R04199 RC00478 ko00000,ko00001,ko00002,ko01000,ko03400 iIT341.HP0510,iLJ478.TM1520,iSbBS512_1146.SbBS512_E0035 Bacteria 1MUCT@1224,2KUZX@206389,2VJC3@28216,COG0289@1,COG0289@2 NA|NA|NA E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate HGDHCNMN_03423 85643.Tmz1t_1730 2.1e-165 589.3 Rhodocyclales Bacteria 1NRP8@1224,2KUIP@206389,2VGZQ@28216,COG0642@1,COG0745@1,COG0745@2,COG0784@1,COG0784@2,COG2198@1,COG2198@2,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_03424 1123487.KB892863_gene1919 1.7e-29 136.0 Rhodocyclales Bacteria 1NRP8@1224,2KUIP@206389,2VGZQ@28216,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_03425 62928.azo1381 4.9e-186 657.1 Rhodocyclales carA GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0032991,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1950,iNJ661.Rv1383,iUTI89_1310.UTI89_C0036,ic_1306.c0040 Bacteria 1MUB9@1224,2KUWH@206389,2VH9Q@28216,COG0505@1,COG0505@2 NA|NA|NA F Belongs to the CarA family HGDHCNMN_03426 62928.azo1382 0.0 1918.3 Rhodocyclales carB GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUDZ@1224,2KUXH@206389,2VI4A@28216,COG0458@1,COG0458@2 NA|NA|NA EF Belongs to the CarB family HGDHCNMN_03427 1304883.KI912532_gene30 1.3e-71 275.8 Rhodocyclales greA GO:0001098,GO:0001108,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006354,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016020,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030312,GO:0031323,GO:0031326,GO:0032774,GO:0032784,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 ko:K03624 ko00000,ko03021 Bacteria 1RCXW@1224,2KUSV@206389,2VQ16@28216,COG0782@1,COG0782@2 NA|NA|NA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides HGDHCNMN_03428 159087.Daro_0941 2.6e-45 188.3 Rhodocyclales Bacteria 1RJPF@1224,2AJXH@1,2KWU0@206389,2VTF5@28216,31AKJ@2 NA|NA|NA S Domain of unknown function (DUF4149) HGDHCNMN_03429 1348657.M622_09820 2.2e-31 142.1 Rhodocyclales yhbY GO:0000027,GO:0000028,GO:0000966,GO:0000967,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0034470,GO:0034471,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0042274,GO:0043021,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1990275 ko:K07574 ko00000,ko03009 Bacteria 1N8K5@1224,2KXBI@206389,2VVP0@28216,COG1534@1,COG1534@2 NA|NA|NA J RNA-binding protein containing KH domain possibly ribosomal protein HGDHCNMN_03430 305700.B447_17903 7.2e-75 287.0 Rhodocyclales ftsJ GO:0000027,GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008650,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.166 ko:K02427 ko00000,ko01000,ko03009 Bacteria 1MW1C@1224,2KW2K@206389,2VIU9@28216,COG0293@1,COG0293@2 NA|NA|NA J Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit HGDHCNMN_03431 994479.GL877879_gene5793 3.5e-46 191.8 Pseudonocardiales ko:K01066 ko00000,ko01000 Bacteria 2GKX2@201174,4E2K4@85010,COG0657@1,COG0657@2 NA|NA|NA I alpha/beta hydrolase fold HGDHCNMN_03432 62928.azo3424 0.0 1389.8 Rhodocyclales rpoB GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 ko:K03043,ko:K13797 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1MUC4@1224,2KV0Q@206389,2VHF3@28216,COG0085@1,COG0085@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates HGDHCNMN_03433 62928.azo3425 3e-44 184.5 Rhodocyclales rplL GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 ko:K02935 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RGU4@1224,2KWTF@206389,2VSG7@28216,COG0222@1,COG0222@2 NA|NA|NA J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation HGDHCNMN_03434 62928.azo3426 2.6e-67 261.5 Rhodocyclales rplJ GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02864,ko:K02935 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RAN5@1224,2KW86@206389,2VQ7A@28216,COG0244@1,COG0244@2 NA|NA|NA J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors HGDHCNMN_03435 62928.azo3427 3.6e-107 394.4 Rhodocyclales rplA GO:0000027,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0017148,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045947,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02863 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MUE6@1224,2KUA3@206389,2VHDK@28216,COG0081@1,COG0081@2 NA|NA|NA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release HGDHCNMN_03436 1123487.KB892855_gene2566 1e-67 262.7 Rhodocyclales rplK GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02867 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RA2M@1224,2KW37@206389,2VPZW@28216,COG0080@1,COG0080@2 NA|NA|NA J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors HGDHCNMN_03437 62928.azo3429 1.1e-87 329.3 Rhodocyclales nusG GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016020,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030312,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 ko:K02601 ko00000,ko03009,ko03021 Bacteria 1MU14@1224,2KUIE@206389,2VKUA@28216,COG0250@1,COG0250@2 NA|NA|NA K Participates in transcription elongation, termination and antitermination HGDHCNMN_03438 1348657.M622_18310 1.1e-40 172.6 Rhodocyclales secE GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria 1RDI9@1224,2KWR4@206389,2VUEX@28216,COG0690@1,COG0690@2 NA|NA|NA U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation HGDHCNMN_03440 159087.Daro_0305 6.9e-15 85.5 Rhodocyclales tuf ko:K02358 ko00000,ko03012,ko03029,ko04147 Bacteria 1MVC0@1224,2KVV4@206389,2VH5D@28216,COG0050@1,COG0050@2 NA|NA|NA J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis HGDHCNMN_03441 159087.Daro_3465 2.7e-37 162.2 Rhodocyclales Bacteria 1RII6@1224,2CEX8@1,2KYT8@206389,2W2TE@28216,32AEQ@2 NA|NA|NA HGDHCNMN_03442 1166130.H650_22500 1.3e-77 296.6 Gammaproteobacteria Bacteria 1N40I@1224,1S1R3@1236,COG4714@1,COG4714@2 NA|NA|NA S membrane-anchored protein conserved in bacteria HGDHCNMN_03443 614083.AWQR01000020_gene172 1.4e-87 329.3 Betaproteobacteria spoIVFB ko:K06402 ko00000,ko01000,ko01002 Bacteria 1PM1Q@1224,2VM3E@28216,COG1994@1,COG1994@2 NA|NA|NA S Peptidase M50 HGDHCNMN_03446 85643.Tmz1t_3371 0.0 1892.9 Rhodocyclales icmF GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0046983,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13,5.4.99.2 ko:K01847,ko:K11942 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUXX@1224,2KVJX@206389,2VH05@28216,COG1703@1,COG1703@2,COG1884@1,COG1884@2,COG2185@1,COG2185@2 NA|NA|NA EI Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly HGDHCNMN_03447 748247.AZKH_4044 1.1e-128 466.5 Rhodocyclales Bacteria 1R4MG@1224,2KVGP@206389,2VISE@28216,COG2207@1,COG2207@2 NA|NA|NA K Arabinose-binding domain of AraC transcription regulator, N-term HGDHCNMN_03448 748280.NH8B_2436 1e-226 793.1 Neisseriales Bacteria 1MU2C@1224,2KQNU@206351,2VH3V@28216,COG5001@1,COG5001@2 NA|NA|NA T diguanylate cyclase HGDHCNMN_03449 62928.azo0694 9.8e-262 909.4 Rhodocyclales Bacteria 1RCM9@1224,2KUYQ@206389,2VHTK@28216,COG4191@1,COG4191@2 NA|NA|NA T COG0642 Signal transduction histidine kinase HGDHCNMN_03450 1348657.M622_07470 2.2e-91 342.0 Rhodocyclales Bacteria 1MWER@1224,2KW1J@206389,2VN6D@28216,COG0745@1,COG0745@2 NA|NA|NA K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain HGDHCNMN_03451 640081.Dsui_1166 4.5e-102 377.5 Rhodocyclales ccp 1.11.1.5 ko:K00428 ko00000,ko01000 Bacteria 1MV70@1224,2KVIB@206389,2VI1Z@28216,COG1858@1,COG1858@2 NA|NA|NA C cytochrome c peroxidase HGDHCNMN_03452 640081.Dsui_2148 1.7e-259 902.5 Rhodocyclales ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU2C@1224,2KW14@206389,2VH3V@28216,COG4564@1,COG4564@2,COG5001@1,COG5001@2 NA|NA|NA T Cache 3/Cache 2 fusion domain HGDHCNMN_03453 159087.Daro_1679 1.7e-181 642.1 Rhodocyclales argD GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MV3C@1224,2KUB8@206389,2VHEB@28216,COG4992@1,COG4992@2 NA|NA|NA E Aminotransferase class-III HGDHCNMN_03454 159087.Daro_1677 1.1e-153 549.7 Rhodocyclales Bacteria 1QTX0@1224,2KW69@206389,2W3XP@28216,COG0477@1,COG2814@2 NA|NA|NA EGP of the major facilitator HGDHCNMN_03455 159087.Daro_2497 2.8e-101 375.6 Rhodocyclales Bacteria 1R5W9@1224,2KVCX@206389,2VKQP@28216,COG0840@1,COG0840@2 NA|NA|NA NT Chemoreceptor zinc-binding domain HGDHCNMN_03456 290397.Adeh_3999 1.6e-66 259.2 Myxococcales yjdF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K08984 ko00000 Bacteria 1N7NB@1224,2WPVX@28221,2YXH0@29,42SI3@68525,COG3647@1,COG3647@2 NA|NA|NA S Predicted membrane protein (DUF2238) HGDHCNMN_03457 1121035.AUCH01000009_gene897 5.9e-43 180.3 Rhodocyclales apaG ko:K06195 ko00000 Bacteria 1MZ2Z@1224,2KWM4@206389,2VSPE@28216,COG2967@1,COG2967@2 NA|NA|NA P protein affecting Mg2 Co2 transport HGDHCNMN_03458 640081.Dsui_0221 1.7e-104 385.6 Rhodocyclales rpe GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01529 RC00540 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUZM@1224,2KVMH@206389,2VIGU@28216,COG0036@1,COG0036@2 NA|NA|NA G Belongs to the ribulose-phosphate 3-epimerase family HGDHCNMN_03459 1042375.AFPL01000032_gene1001 1.2e-108 399.8 Alteromonadaceae MA20_29105 Bacteria 1MUDK@1224,1RP9W@1236,464RD@72275,COG4977@1,COG4977@2 NA|NA|NA K DJ-1/PfpI family HGDHCNMN_03460 159087.Daro_1069 1.5e-97 363.2 Rhodocyclales Bacteria 1MW59@1224,2KW84@206389,2VKPZ@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HGDHCNMN_03461 76114.ebA4174 6.9e-71 273.9 Rhodocyclales gph GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0031404,GO:0033554,GO:0034641,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 R01334 RC00017 ko00000,ko00001,ko01000 iSBO_1134.SBO_3372,iSbBS512_1146.SbBS512_E3762,iYL1228.KPN_03756 Bacteria 1RDDY@1224,2KWEV@206389,2VIZ6@28216,COG0546@1,COG0546@2 NA|NA|NA G HAD-hyrolase-like HGDHCNMN_03462 305700.B447_12914 1.2e-234 818.9 Rhodocyclales trpE 4.1.3.27 ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 iJN746.PP_0417 Bacteria 1MVBJ@1224,2KVHH@206389,2VI2V@28216,COG0147@1,COG0147@2 NA|NA|NA E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia HGDHCNMN_03463 1485544.JQKP01000003_gene147 4e-45 188.0 Betaproteobacteria Bacteria 1NPDC@1224,2ENFG@1,2W4J3@28216,33G2V@2 NA|NA|NA HGDHCNMN_03464 62928.azo3324 3.5e-92 344.4 Rhodocyclales trpG 2.6.1.85,4.1.3.27 ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986,R01716 RC00010,RC01418,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV5Y@1224,2KVJD@206389,2VHGQ@28216,COG0512@1,COG0512@2 NA|NA|NA EH anthranilate HGDHCNMN_03465 305700.B447_12924 3.4e-154 551.2 Rhodocyclales trpD GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01073 RC00010,RC00440,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 iJN746.PP_0421 Bacteria 1MUPV@1224,2KUC1@206389,2VH7F@28216,COG0547@1,COG0547@2 NA|NA|NA F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) HGDHCNMN_03466 62928.azo3322 3.6e-103 381.3 Rhodocyclales trpC GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48,5.3.1.24 ko:K01609,ko:K13498 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03508,R03509 RC00944,RC00945 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2494,iJN746.PP_0422 Bacteria 1MW5K@1224,2KU9A@206389,2VIN7@28216,COG0134@1,COG0134@2 NA|NA|NA E Belongs to the TrpC family HGDHCNMN_03467 76114.ebA4202 7.7e-105 388.7 Rhodocyclales tamB ko:K09800 ko00000,ko02000 Bacteria 1MUVD@1224,2KUFW@206389,2VJB8@28216,COG2911@1,COG2911@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_03469 62928.azo0433 5.6e-109 400.6 Rhodocyclales MA20_18170 ko:K07090 ko00000 Bacteria 1MWX2@1224,2KVNG@206389,2VMUD@28216,COG0730@1,COG0730@2 NA|NA|NA S Sulfite exporter TauE/SafE HGDHCNMN_03470 62928.azo0434 3e-141 508.1 Rhodocyclales cysB ko:K13634,ko:K13635 ko00000,ko03000 Bacteria 1MU8N@1224,2KURX@206389,2VHQY@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_03471 338969.Rfer_3847 4.7e-11 75.9 Betaproteobacteria Bacteria 1RKWG@1224,2BGDI@1,2VYJE@28216,32ABA@2 NA|NA|NA HGDHCNMN_03472 1348657.M622_04005 1.3e-190 672.9 Betaproteobacteria kefC ko:K03455,ko:K11745,ko:K11747 ko00000,ko02000 2.A.37,2.A.37.1.1,2.A.37.1.2 Bacteria 1MV34@1224,2VHQQ@28216,COG0475@1,COG0475@2,COG1226@1,COG1226@2 NA|NA|NA P Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family HGDHCNMN_03473 62928.azo0436 1.9e-63 249.6 Rhodocyclales ansB 3.5.1.1,3.5.1.38 ko:K01424,ko:K05597 ko00220,ko00250,ko00460,ko00471,ko01100,ko01110,ko02020,map00220,map00250,map00460,map00471,map01100,map01110,map02020 R00256,R00485,R01579 RC00010,RC02798 ko00000,ko00001,ko01000 Bacteria 1MWIR@1224,2KWJ3@206389,2VJI2@28216,COG0252@1,COG0252@2 NA|NA|NA EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D HGDHCNMN_03474 748247.AZKH_3049 8.3e-115 419.9 Rhodocyclales gltL 3.6.3.21 ko:K02028,ko:K10004 ko02010,ko02020,map02010,map02020 M00230,M00236 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3,3.A.1.3.19,3.A.1.3.4 Bacteria 1MU9Q@1224,2KUY5@206389,2VHIC@28216,COG1126@1,COG1126@2 NA|NA|NA E ABC-type polar amino acid transport system, ATPase component HGDHCNMN_03475 1121035.AUCH01000006_gene730 1.4e-95 355.9 Rhodocyclales gltK GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1901998,GO:1903825,GO:1905039 ko:K02029,ko:K10002 ko02010,ko02020,map02010,map02020 M00230,M00236 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.19,3.A.1.3.4 iEcHS_1320.EcHS_A0698,iEcolC_1368.EcolC_2992,iSF_1195.SF0628,iSFxv_1172.SFxv_0695,iS_1188.S0650 Bacteria 1MV3I@1224,2KW71@206389,2VIQB@28216,COG0765@1,COG0765@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component HGDHCNMN_03476 748247.AZKH_3047 3e-104 384.8 Rhodocyclales gltJ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02029,ko:K10003,ko:K10040 ko02010,ko02020,map02010,map02020 M00228,M00230,M00236 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.19,3.A.1.3.4 iJN746.PP_1070 Bacteria 1MUVX@1224,2KVZV@206389,2VJ8A@28216,COG0765@1,COG0765@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component HGDHCNMN_03477 640081.Dsui_0635 2.3e-127 461.8 Rhodocyclales gltI GO:0003333,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0015711,GO:0015740,GO:0015800,GO:0015807,GO:0015813,GO:0015849,GO:0015893,GO:0016595,GO:0016597,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0034220,GO:0036094,GO:0042221,GO:0042493,GO:0042597,GO:0043167,GO:0043168,GO:0043177,GO:0044464,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070335,GO:0070778,GO:0071702,GO:0071705,GO:0098656,GO:1902475,GO:1903825,GO:1905039 ko:K10001 ko02010,ko02020,map02010,map02020 M00230 ko00000,ko00001,ko00002,ko02000 3.A.1.3.19,3.A.1.3.4 iECH74115_1262.ECH74115_0748,iECSE_1348.ECSE_0725,iECSP_1301.ECSP_0707,iECW_1372.ECW_m0710,iECs_1301.ECs0694,iEKO11_1354.EKO11_3211,iG2583_1286.G2583_0819,iSFV_1184.SFV_0671,iSF_1195.SF0626,iS_1188.S0648,iWFL_1372.ECW_m0710,iZ_1308.Z0805 Bacteria 1MV5D@1224,2KUID@206389,2VHFS@28216,COG0834@1,COG0834@2 NA|NA|NA ET Bacterial periplasmic substrate-binding proteins HGDHCNMN_03478 522306.CAP2UW1_2595 4.2e-23 115.2 Betaproteobacteria ybaY GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0010810,GO:0016020,GO:0019867,GO:0030155,GO:0030312,GO:0030313,GO:0031975,GO:0042802,GO:0044462,GO:0044464,GO:0050789,GO:0065007,GO:0071944 ko:K03668,ko:K06079,ko:K09914 ko01503,map01503 ko00000,ko00001 Bacteria 1N8AF@1224,2VXB0@28216,COG3015@1,COG3015@2,COG3126@1,COG3126@2,COG3187@1,COG3187@2 NA|NA|NA O Type III secretion system lipoprotein chaperone (YscW) HGDHCNMN_03479 1336243.JAEA01000006_gene329 6.1e-231 807.0 Methylobacteriaceae ftsH ko:K03798 M00742 ko00000,ko00002,ko01000,ko01002,ko03110 Bacteria 1JX4A@119045,1MU6J@1224,2TRNK@28211,COG0465@1,COG0465@2 NA|NA|NA O Peptidase family M41 HGDHCNMN_03480 76114.ebA3682 3e-158 565.5 Rhodocyclales rhlE GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 ko:K11927 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 1MU49@1224,2KVW1@206389,2VH16@28216,COG0513@1,COG0513@2 NA|NA|NA JKL DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA HGDHCNMN_03482 748247.AZKH_1113 1.8e-126 459.1 Rhodocyclales glcE 1.1.3.15 ko:K00104,ko:K11472 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 R00475 RC00042 ko00000,ko00001,ko01000 Bacteria 1MVYV@1224,2KUSX@206389,2VHUQ@28216,COG0277@1,COG0277@2 NA|NA|NA C FAD binding HGDHCNMN_03484 748247.AZKH_1111 3.5e-232 810.8 Rhodocyclales glcD GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0033554,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 1.1.2.4,1.1.3.15 ko:K00102,ko:K00104 ko00620,ko00630,ko01100,ko01110,ko01120,ko01130,map00620,map00630,map01100,map01110,map01120,map01130 R00197,R00475 RC00042,RC00044 ko00000,ko00001,ko01000 Bacteria 1MU6Y@1224,2KUI1@206389,2VH8M@28216,COG0277@1,COG0277@2 NA|NA|NA C Glycolate oxidase subunit GlcD HGDHCNMN_03485 62928.azo0997 4e-51 208.4 Rhodocyclales ko:K05799 ko00000,ko03000 Bacteria 1R68P@1224,2KWIZ@206389,2VK2A@28216,COG2186@1,COG2186@2 NA|NA|NA K FCD HGDHCNMN_03486 62928.azo2357 2.3e-164 585.5 Rhodocyclales gatA3 3.5.1.4,6.3.5.6,6.3.5.7 ko:K01426,ko:K02433 ko00330,ko00360,ko00380,ko00627,ko00643,ko00970,ko01100,ko01120,map00330,map00360,map00380,map00627,map00643,map00970,map01100,map01120 R02540,R03096,R03180,R03905,R03909,R04212,R05551,R05590 RC00010,RC00100,RC00950,RC01025 ko00000,ko00001,ko01000,ko03029 Bacteria 1MW3Z@1224,2KUSY@206389,2VJFS@28216,COG0154@1,COG0154@2 NA|NA|NA J Amidase HGDHCNMN_03487 62928.azo2358 1e-52 213.8 Rhodocyclales Bacteria 1PSIP@1224,2KYW6@206389,2WA8Q@28216,COG2207@1,COG2207@2 NA|NA|NA K Helix-turn-helix domain HGDHCNMN_03488 296591.Bpro_4562 1.4e-83 316.2 Comamonadaceae hyi GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0008903,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019752,GO:0032787,GO:0042802,GO:0042803,GO:0043436,GO:0044237,GO:0044281,GO:0046487,GO:0046983,GO:0071704 5.3.1.22,5.3.1.35 ko:K01816,ko:K22131 ko00630,ko01100,map00630,map01100 R01394 RC00511 ko00000,ko00001,ko01000 iECO103_1326.ECO103_0481,iECO111_1330.ECO111_0541,iECO26_1355.ECO26_0541 Bacteria 1MV53@1224,2VJ19@28216,4ACR0@80864,COG3622@1,COG3622@2 NA|NA|NA G Belongs to the hyi family HGDHCNMN_03489 666685.R2APBS1_1576 3.9e-33 147.9 Xanthomonadales Bacteria 1NPUA@1224,1T8IZ@1236,1XATB@135614,29PWE@1,30AUS@2 NA|NA|NA HGDHCNMN_03490 1150469.RSPPHO_02007 4.3e-83 316.2 Bacteria 2.7.11.1 ko:K14949 ko05152,map05152 ko00000,ko00001,ko01000,ko01001 Bacteria COG2842@1,COG2842@2,COG5010@1,COG5010@2 NA|NA|NA S AAA domain HGDHCNMN_03491 748247.AZKH_p0072 8.8e-54 216.5 Betaproteobacteria 3.6.1.13,3.6.1.55,3.6.1.67 ko:K01515,ko:K03574,ko:K08310 ko00230,ko00790,map00230,map00790 M00126 R01054,R04638 RC00002 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1NPFG@1224,2W2QA@28216,COG0494@1,COG0494@2 NA|NA|NA L Belongs to the Nudix hydrolase family HGDHCNMN_03493 159087.Daro_3391 3.7e-164 584.3 Rhodocyclales Bacteria 1MVHC@1224,2KUIW@206389,2VIJ6@28216,COG1638@1,COG1638@2 NA|NA|NA G transporter HGDHCNMN_03494 159087.Daro_3390 5.8e-64 250.4 Rhodocyclales dctQ1 ko:K11689 ko02020,map02020 ko00000,ko00001,ko02000 2.A.56.1 Bacteria 1RDY3@1224,2KX32@206389,2VRWQ@28216,COG3090@1,COG3090@2 NA|NA|NA G TRAP-type C4-dicarboxylate transport system, small permease component HGDHCNMN_03495 159087.Daro_3389 2.3e-208 731.5 Rhodocyclales dctM1 Bacteria 1MU0F@1224,2KVZN@206389,2VHJP@28216,COG1593@1,COG1593@2 NA|NA|NA G C4-dicarboxylate transport system HGDHCNMN_03497 342113.DM82_1380 2.8e-194 684.9 Burkholderiaceae dbpA GO:0000027,GO:0000166,GO:0000339,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006412,GO:0006413,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008135,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0016043,GO:0016070,GO:0016281,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033677,GO:0034458,GO:0034459,GO:0034622,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0060255,GO:0065003,GO:0065007,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:0140098,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 3.6.4.13 ko:K05591,ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 1K43J@119060,1MU49@1224,2VH16@28216,COG0513@1,COG0513@2 NA|NA|NA L Belongs to the DEAD box helicase family HGDHCNMN_03498 62928.azo3524 9.7e-94 349.7 Rhodocyclales bluB 1.13.11.79,2.1.1.107,2.4.2.21 ko:K00768,ko:K02303,ko:K04719 ko00740,ko00860,ko01100,ko01110,ko01120,map00740,map00860,map01100,map01110,map01120 M00121,M00122 R03194,R04148,R09083 RC00003,RC00033,RC00063,RC00435,RC00871,RC02413 ko00000,ko00001,ko00002,ko01000 Bacteria 1MZN8@1224,2KUIF@206389,2VI8R@28216,COG0778@1,COG0778@2 NA|NA|NA C Cob(II)yrinic acid a,c-diamide reductase HGDHCNMN_03500 1485544.JQKP01000001_gene1322 6.1e-25 120.2 Betaproteobacteria 3.6.4.12 ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1QVH2@1224,2W49M@28216,COG1733@1,COG1733@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_03501 62928.azo2370 2e-22 112.1 Betaproteobacteria Bacteria 1NE74@1224,2ECQF@1,2VXEU@28216,336N3@2 NA|NA|NA HGDHCNMN_03502 1485544.JQKP01000001_gene1324 5.6e-44 184.1 Betaproteobacteria Bacteria 1NSI8@1224,2C60N@1,2W0QW@28216,33S2Z@2 NA|NA|NA HGDHCNMN_03506 640081.Dsui_2199 1.5e-32 145.2 Rhodocyclales hupB ko:K03530 ko00000,ko03032,ko03036,ko03400 Bacteria 1MZ5B@1224,2KX2Q@206389,2VU4V@28216,COG0776@1,COG0776@2 NA|NA|NA L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions HGDHCNMN_03507 1348657.M622_01665 3.2e-27 127.5 Rhodocyclales rpsT GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02968 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZ94@1224,2KWZ9@206389,2VTYY@28216,COG0268@1,COG0268@2 NA|NA|NA J Binds directly to 16S ribosomal RNA HGDHCNMN_03508 159087.Daro_3022 2.8e-192 677.9 Rhodocyclales thlA 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MU5G@1224,2KVUF@206389,2VH4C@28216,COG0183@1,COG0183@2 NA|NA|NA I Belongs to the thiolase family HGDHCNMN_03509 62928.azo2173 9.6e-116 423.3 Rhodocyclales cobD GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 6.3.1.10 ko:K02227 ko00860,ko01100,map00860,map01100 M00122 R06529,R07302 RC00090,RC00096 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWCK@1224,2KUFS@206389,2VH7X@28216,COG1270@1,COG1270@2 NA|NA|NA H Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group HGDHCNMN_03510 305700.B447_00315 3.6e-58 231.1 Rhodocyclales nudL Bacteria 1RD2C@1224,2KWCT@206389,2VREV@28216,COG0494@1,COG0494@2 NA|NA|NA L NUDIX domain HGDHCNMN_03511 1163617.SCD_n00288 1.8e-44 185.3 Betaproteobacteria ko:K07007 ko00000 Bacteria 1MUGC@1224,2VIGJ@28216,COG2081@1,COG2081@2 NA|NA|NA S PFAM HI0933 family protein HGDHCNMN_03512 1211112.ALJC01000127_gene4350 5.3e-26 123.2 Gammaproteobacteria Bacteria 1N72W@1224,1SGV7@1236,COG2261@1,COG2261@2 NA|NA|NA S Membrane HGDHCNMN_03513 640512.BC1003_0040 9.7e-66 256.5 Burkholderiaceae Bacteria 1K3GH@119060,1RASZ@1224,2WFMC@28216,COG1280@1,COG1280@2 NA|NA|NA E LysE type translocator HGDHCNMN_03514 640512.BC1003_0041 7.9e-85 320.5 Burkholderiaceae ybfI GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 Bacteria 1K4QQ@119060,1R3ZW@1224,2VNIP@28216,COG2207@1,COG2207@2 NA|NA|NA K PFAM helix-turn-helix- domain containing protein AraC type HGDHCNMN_03515 338969.Rfer_3141 9.5e-90 336.7 Comamonadaceae Bacteria 1MW9A@1224,2VK1C@28216,4ABW6@80864,COG1028@1,COG1028@2 NA|NA|NA IQ Short-chain dehydrogenase reductase sdr HGDHCNMN_03516 76114.ebA2897 1.4e-130 473.0 Rhodocyclales fimV 2.7.11.1 ko:K03217,ko:K08086,ko:K12132 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko01000,ko01001,ko02044,ko03029 2.A.9 Bacteria 1MX5C@1224,2KVUG@206389,2VK44@28216,COG1432@1,COG1432@2,COG3170@1,COG3170@2 NA|NA|NA NU NYN domain HGDHCNMN_03517 497321.C664_03335 4.5e-51 207.2 Rhodocyclales Bacteria 1N0N2@1224,2DN03@1,2KX0W@206389,2VUIB@28216,32UNZ@2 NA|NA|NA HGDHCNMN_03518 748247.AZKH_4432 1.7e-76 292.4 Rhodocyclales nahD Bacteria 1RDNQ@1224,2KWHY@206389,2VQ4T@28216,COG3917@1,COG3917@2 NA|NA|NA Q 2-hydroxychromene-2-carboxylate isomerase HGDHCNMN_03519 62928.azo3746 8.5e-10 70.9 Rhodocyclales Bacteria 1NIW7@1224,2A5VY@1,2KXP5@206389,2VYQ4@28216,30UMT@2 NA|NA|NA HGDHCNMN_03520 85643.Tmz1t_0581 1e-284 985.7 Rhodocyclales yheS GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K06158 ko00000,ko03012 Bacteria 1MU37@1224,2KUY0@206389,2VHGH@28216,COG0488@1,COG0488@2 NA|NA|NA S COG0488 ATPase components of ABC transporters with duplicated ATPase domains HGDHCNMN_03521 338969.Rfer_0818 1.5e-88 332.4 Betaproteobacteria thrH 2.7.1.39,3.1.3.3 ko:K02203 ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00680,map01100,map01110,map01120,map01130,map01230 M00018 R00582,R01771 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1MZPG@1224,2VHDT@28216,COG0560@1,COG0560@2 NA|NA|NA E phosphoserine phosphatase HGDHCNMN_03522 1123367.C666_06980 1.7e-159 568.5 Rhodocyclales purU 3.5.1.10 ko:K01433 ko00630,ko00670,map00630,map00670 R00944 RC00026,RC00111 ko00000,ko00001,ko01000 Bacteria 1MVCF@1224,2KVJ6@206389,2VIXE@28216,COG0788@1,COG0788@2 NA|NA|NA F Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) HGDHCNMN_03524 1112274.KI911560_gene681 1.2e-49 202.2 Nitrosomonadales phnA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06193 ko01120,map01120 ko00000 Bacteria 1RGUU@1224,2KMVC@206350,2VSKS@28216,COG2824@1,COG2824@2 NA|NA|NA P PhnA Zinc-Ribbon HGDHCNMN_03525 748247.AZKH_0227 2e-160 572.0 Rhodocyclales trmA GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0019843,GO:0030488,GO:0030696,GO:0030697,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363 2.1.1.190,2.1.1.35 ko:K00557,ko:K03215 ko00000,ko01000,ko03009,ko03016 Bacteria 1MY45@1224,2KU7V@206389,2VMIG@28216,COG2265@1,COG2265@2 NA|NA|NA J Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA) HGDHCNMN_03527 1121035.AUCH01000008_gene977 1.5e-198 699.1 Rhodocyclales amtB GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008519,GO:0015075,GO:0015291,GO:0015292,GO:0015669,GO:0015670,GO:0015696,GO:0015893,GO:0016020,GO:0016021,GO:0019755,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0098655 ko:K03320 ko00000,ko02000 1.A.11 iEcE24377_1341.EcE24377A_0487 Bacteria 1NR9F@1224,2KVBV@206389,2VJ8B@28216,COG0004@1,COG0004@2 NA|NA|NA P Ammonium Transporter HGDHCNMN_03528 748247.AZKH_4422 7.4e-50 203.0 Rhodocyclales glnK ko:K04751,ko:K04752 ko02020,map02020 ko00000,ko00001 Bacteria 1RGWK@1224,2KWCQ@206389,2VSEZ@28216,COG0347@1,COG0347@2 NA|NA|NA K Belongs to the P(II) protein family HGDHCNMN_03529 640081.Dsui_0765 2.1e-68 265.8 Rhodocyclales Bacteria 1NR8Y@1224,2DQY9@1,2KWEJ@206389,2VNF6@28216,339CR@2 NA|NA|NA S Bacterial protein of unknown function (Gcw_chp) HGDHCNMN_03530 62928.azo3737 1.2e-20 105.5 Rhodocyclales yqiC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K09806 ko00000 Bacteria 1N7AH@1224,2KX84@206389,2VVR4@28216,COG2960@1,COG2960@2 NA|NA|NA S Membrane fusogenic activity HGDHCNMN_03531 580332.Slit_2052 5.3e-56 224.2 Nitrosomonadales Bacteria 1R9XD@1224,2VQTQ@28216,44V7N@713636,COG2353@1,COG2353@2 NA|NA|NA S Belongs to the UPF0312 family HGDHCNMN_03532 1210884.HG799475_gene15217 1e-104 387.1 Planctomycetes Bacteria 29MQ2@1,2J179@203682,308MT@2 NA|NA|NA HGDHCNMN_03533 1123487.KB892834_gene2600 3e-199 701.4 Rhodocyclales comM GO:0003674,GO:0003824,GO:0004176,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0042623,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 ko:K07391 ko00000 Bacteria 1MU4R@1224,2KUAB@206389,2VHRV@28216,COG0606@1,COG0606@2 NA|NA|NA O Mg chelatase subunit ChlI HGDHCNMN_03534 1123487.KB892857_gene2359 7.9e-35 153.3 Rhodocyclales Bacteria 1MZ7P@1224,2DM6D@1,2KYYM@206389,2VUHB@28216,31WQ8@2 NA|NA|NA HGDHCNMN_03535 748247.AZKH_4413 6.8e-114 417.5 Rhodocyclales bcr ko:K07552 ko00000,ko02000 2.A.1.2 Bacteria 1MW19@1224,2KUCA@206389,2VHTW@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HGDHCNMN_03536 1469613.JT55_05420 7.7e-35 154.1 Rhodovulum Bacteria 1N23F@1224,2D1C5@1,2U94F@28211,32TAD@2,3FDMD@34008 NA|NA|NA S Ceramidase HGDHCNMN_03537 497321.C664_02860 2e-62 245.4 Rhodocyclales nudF 3.6.1.13 ko:K01515 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000 iHN637.CLJU_RS05505,iSB619.SA_RS07540,iYO844.BSU23610 Bacteria 1RCX7@1224,2KWAR@206389,2VRU5@28216,COG0494@1,COG0494@2 NA|NA|NA L COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes HGDHCNMN_03538 1096546.WYO_2871 2.7e-66 258.8 Methylobacteriaceae Bacteria 1JREY@119045,1MY3D@1224,2TSQF@28211,COG0745@1,COG0745@2 NA|NA|NA T PFAM response regulator receiver HGDHCNMN_03539 1280944.HY17_12755 2e-110 405.6 Hyphomonadaceae ilvE 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MVB0@1224,2TR1H@28211,43WHR@69657,COG0115@1,COG0115@2 NA|NA|NA E Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family HGDHCNMN_03540 366602.Caul_4894 4.5e-44 184.1 Caulobacterales yigI Bacteria 1RITB@1224,2KGZU@204458,2U58S@28211,COG2050@1,COG2050@2 NA|NA|NA Q PFAM thioesterase superfamily HGDHCNMN_03541 509190.Cseg_4134 1.7e-37 162.5 Caulobacterales MA20_04725 ko:K02614 ko00360,map00360 R09840 RC00004,RC00014 ko00000,ko00001,ko01000 Bacteria 1RHK6@1224,2KH0A@204458,2U72Z@28211,COG2050@1,COG2050@2 NA|NA|NA Q thioesterase HGDHCNMN_03542 366602.Caul_0646 1.2e-53 216.5 Caulobacterales Bacteria 1MYZN@1224,2KJU6@204458,2UC5M@28211,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HGDHCNMN_03543 509190.Cseg_3595 2.8e-84 318.9 Caulobacterales lipN ko:K01066 ko00000,ko01000 Bacteria 1NEXK@1224,2KFYS@204458,2U5X1@28211,COG0657@1,COG0657@2 NA|NA|NA I alpha/beta hydrolase fold HGDHCNMN_03544 402881.Plav_1316 1.3e-116 426.8 Rhodobiaceae MA20_25070 ko:K06902 ko04138,map04138 ko00000,ko00001,ko02000,ko04131 2.A.1.24,9.A.15.1 Bacteria 1JNZ4@119043,1MWXB@1224,2TSCV@28211,COG2270@1,COG2270@2 NA|NA|NA S Vacuole effluxer Atg22 like HGDHCNMN_03545 1040983.AXAE01000009_gene5425 2.9e-29 134.8 Phyllobacteriaceae Bacteria 1MZHP@1224,2UBSF@28211,43KW7@69277,COG4852@1,COG4852@2 NA|NA|NA S Predicted membrane protein (DUF2177) HGDHCNMN_03546 1144307.PMI04_00691 9e-26 123.2 Proteobacteria Bacteria 1QYTI@1224,2B8PX@1,321ZI@2 NA|NA|NA S Protein of unknown function (DUF4255) HGDHCNMN_03548 1144307.PMI04_00693 2.3e-217 761.9 Sphingomonadales ko:K06907 ko00000 Bacteria 1MX89@1224,2K4BS@204457,2TVB3@28211,COG3497@1,COG3497@2 NA|NA|NA S Phage tail sheath protein HGDHCNMN_03549 1144307.PMI04_00694 1.2e-55 222.6 Sphingomonadales Bacteria 1RKSC@1224,2BECK@1,2K73W@204457,2VGYJ@28211,3283Q@2 NA|NA|NA S T4-like virus tail tube protein gp19 HGDHCNMN_03550 1144307.PMI04_00445 7.1e-143 514.6 Alphaproteobacteria ko:K06907 ko00000 Bacteria 1MX89@1224,2TVB3@28211,COG3497@1,COG3497@2 NA|NA|NA S Phage tail sheath protein HGDHCNMN_03551 1144307.PMI04_00444 1.7e-47 195.7 Proteobacteria Bacteria 1RKVJ@1224,2DMAD@1,32C5Y@2 NA|NA|NA S T4-like virus tail tube protein gp19 HGDHCNMN_03552 1144307.PMI04_00443 3.5e-60 239.2 Proteobacteria Bacteria 1NC3Q@1224,COG1652@1,COG1652@2 NA|NA|NA L Flagellar Assembly Protein A HGDHCNMN_03554 1144307.PMI04_00441 4.3e-83 315.1 Sphingomonadales ko:K06905 ko00000 Bacteria 1R67C@1224,2K7RW@204457,2U3GW@28211,COG3500@1,COG3500@2 NA|NA|NA S Phage protein D HGDHCNMN_03555 1144307.PMI04_00440 6.8e-82 310.5 Sphingomonadales Bacteria 1MU7Q@1224,2K1Q7@204457,2TUB2@28211,COG3501@1,COG3501@2 NA|NA|NA S Protein conserved in bacteria HGDHCNMN_03556 1144307.PMI04_00439 1.6e-136 493.8 Sphingomonadales Bacteria 1RAJN@1224,28NRK@1,2KBUM@204457,2TZZS@28211,2ZBQU@2 NA|NA|NA HGDHCNMN_03557 1144307.PMI04_00438 3.3e-33 147.9 Sphingomonadales ko:K06903 ko00000 Bacteria 1N23A@1224,2K88R@204457,2UER5@28211,COG3628@1,COG3628@2 NA|NA|NA S Gene 25-like lysozyme HGDHCNMN_03558 1144305.PMI02_01836 3.7e-69 268.5 Sphingomonadales Bacteria 1N2Q4@1224,2K54U@204457,2UC5A@28211,COG1846@1,COG1846@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_03560 1150599.MPHLEI_03383 9e-20 104.4 Mycobacteriaceae Bacteria 234FV@1762,2GM7Q@201174,COG0739@1,COG0739@2 NA|NA|NA M peptidase HGDHCNMN_03561 279238.Saro_2686 2.3e-89 335.1 Sphingomonadales MA20_21045 Bacteria 1MX90@1224,2K15G@204457,2TUIX@28211,COG5514@1,COG5514@2 NA|NA|NA S Domain of unknown function (DUF1794) HGDHCNMN_03562 1096930.L284_14760 2e-55 222.6 Sphingomonadales cybP Bacteria 1RIG7@1224,2K5R6@204457,2U9DR@28211,COG3658@1,COG3658@2 NA|NA|NA C Prokaryotic cytochrome b561 HGDHCNMN_03563 1096930.L284_14755 3.7e-20 104.8 Sphingomonadales cycP Bacteria 1Q594@1224,2K6Z1@204457,2UG98@28211,COG3909@1,COG3909@2 NA|NA|NA C Cytochrome C' HGDHCNMN_03564 1081640.AGFU01000015_gene2141 3.7e-30 137.1 Sphingomonadales atzF 3.5.1.4,3.5.1.54 ko:K01426,ko:K01457 ko00220,ko00330,ko00360,ko00380,ko00627,ko00643,ko00791,ko01100,ko01120,map00220,map00330,map00360,map00380,map00627,map00643,map00791,map01100,map01120 R00005,R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025,RC02756 ko00000,ko00001,ko01000 Bacteria 1MUVQ@1224,2K2BN@204457,2TR00@28211,COG0154@1,COG0154@2 NA|NA|NA J Amidase HGDHCNMN_03565 1172188.KB911820_gene2739 7.4e-42 179.5 Intrasporangiaceae Bacteria 2IB8V@201174,4FIQW@85021,COG4995@1,COG4995@2 NA|NA|NA S CHAT domain HGDHCNMN_03566 159087.Daro_2968 8.7e-109 400.2 Rhodocyclales rarD ko:K05786 ko00000,ko02000 2.A.7.7 Bacteria 1MX5G@1224,2KVWX@206389,2VJ5U@28216,COG2962@1,COG2962@2 NA|NA|NA S RarD protein, DMT superfamily transporter HGDHCNMN_03567 748247.AZKH_4357 6.3e-22 110.2 Rhodocyclales Bacteria 1N8HJ@1224,2E54A@1,2KXCA@206389,2VVW9@28216,32ZX9@2 NA|NA|NA S Domain of unknown function (DUF1840) HGDHCNMN_03569 1121035.AUCH01000009_gene804 4.7e-122 444.5 Rhodocyclales rsgA 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 Bacteria 1MUEF@1224,2KYUX@206389,2VNB4@28216,COG1162@1,COG1162@2 NA|NA|NA S RsgA GTPase HGDHCNMN_03570 85643.Tmz1t_3945 1e-62 246.5 Rhodocyclales 3.5.1.19 ko:K08281 ko00760,ko01100,map00760,map01100 R01268 RC00100 ko00000,ko00001,ko01000 Bacteria 1RDHA@1224,2KXMA@206389,2VQG4@28216,COG1335@1,COG1335@2 NA|NA|NA Q Isochorismatase hydrolase HGDHCNMN_03571 85643.Tmz1t_3944 1.7e-103 382.5 Rhodocyclales Bacteria 1MWVB@1224,2KXAJ@206389,2VIY0@28216,COG0583@1,COG0583@2 NA|NA|NA K COG0583 Transcriptional regulator HGDHCNMN_03572 640081.Dsui_3408 5.6e-12 77.0 Rhodocyclales Bacteria 1N665@1224,2BW01@1,2KWYH@206389,2VVCA@28216,32RUH@2 NA|NA|NA HGDHCNMN_03573 426114.THI_1413 6e-46 191.0 Proteobacteria 2.7.7.87 ko:K07566 R10463 RC00745 ko00000,ko01000,ko03009,ko03016 Bacteria 1RHUF@1224,COG4902@1,COG4902@2 NA|NA|NA S protein domain (DUF2202) HGDHCNMN_03574 1121035.AUCH01000008_gene990 4.1e-45 187.6 Rhodocyclales mak GO:0003674,GO:0003824,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019318,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704 2.7.1.4,2.7.1.59 ko:K00847,ko:K00884 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 R00760,R00867,R01201,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 iECSE_1348.ECSE_0415,iEcHS_1320.EcHS_A0462,iPC815.YPO3211,iS_1188.S0338,iYL1228.KPN_00337 Bacteria 1MU94@1224,2KVCS@206389,2VMGT@28216,COG1940@1,COG1940@2 NA|NA|NA GK ROK family HGDHCNMN_03577 748247.AZKH_3954 1.8e-127 462.6 Rhodocyclales ko:K07814 ko00000,ko02022 Bacteria 1MUB8@1224,2KUVQ@206389,2VH1F@28216,COG3437@1,COG3437@2 NA|NA|NA T Metal dependent phosphohydrolases with conserved 'HD' motif. HGDHCNMN_03578 1304883.KI912532_gene1140 3.7e-49 201.4 Rhodocyclales mug 3.2.2.28 ko:K03649 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1REPV@1224,2KWSB@206389,2VRAT@28216,COG3663@1,COG3663@2 NA|NA|NA L G T U mismatch-specific DNA glycosylase HGDHCNMN_03579 62928.azo1350 2.2e-259 901.4 Rhodocyclales ko:K03821 ko00650,map00650 R04254 RC00004 ko00000,ko00001,ko01000 Bacteria 1MU68@1224,2KV2G@206389,2VKMW@28216,COG3243@1,COG3243@2 NA|NA|NA I Poly-beta-hydroxybutyrate HGDHCNMN_03580 497321.C664_09788 5.3e-56 223.8 Rhodocyclales Bacteria 1MZ3K@1224,2KW8T@206389,2VQAE@28216,COG0589@1,COG0589@2 NA|NA|NA T Universal stress protein HGDHCNMN_03581 29581.BW37_04151 6.2e-161 574.7 Oxalobacteraceae Bacteria 1MUNI@1224,2VN34@28216,4762A@75682,COG0784@1,COG0784@2,COG5001@1,COG5001@2 NA|NA|NA T Domain of unknown function (DUF3369) HGDHCNMN_03583 1348657.M622_12280 1.5e-276 958.4 Betaproteobacteria soxB 3.1.3.5,3.6.1.45 ko:K11751,ko:K17224 ko00230,ko00240,ko00760,ko00920,ko01100,ko01110,ko01120,map00230,map00240,map00760,map00920,map01100,map01110,map01120 M00595 R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346,R10151 RC00017,RC03151,RC03152 ko00000,ko00001,ko00002,ko01000 iE2348C_1286.E2348C_4246,iECS88_1305.ECS88_4396,iLF82_1304.LF82_624 Bacteria 1MX03@1224,2VJTS@28216,COG0737@1,COG0737@2 NA|NA|NA F Belongs to the 5'-nucleotidase family HGDHCNMN_03584 1304883.KI912532_gene1292 8.4e-92 343.2 Rhodocyclales soxX ko:K02305,ko:K17223 ko00910,ko00920,ko01100,ko01120,map00910,map00920,map01100,map01120 M00529,M00595 R00294,R10151 RC02794,RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.10 Bacteria 1P1GY@1224,2KYRD@206389,2VP4W@28216,COG2010@1,COG2010@2 NA|NA|NA C Cytochrome c HGDHCNMN_03585 1304883.KI912532_gene1293 2.1e-119 435.3 Rhodocyclales soxA GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005507,GO:0005515,GO:0005575,GO:0005623,GO:0006091,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0016667,GO:0016669,GO:0016740,GO:0016782,GO:0016783,GO:0018192,GO:0018193,GO:0018198,GO:0018307,GO:0019417,GO:0019538,GO:0020037,GO:0022900,GO:0036211,GO:0042597,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0046982,GO:0046983,GO:0048037,GO:0055114,GO:0071704,GO:0097159,GO:0098822,GO:1901363,GO:1901564 1.8.2.2 ko:K00406,ko:K03889,ko:K17222,ko:K19713 ko00190,ko00920,ko01100,ko01120,ko02020,map00190,map00920,map01100,map01120,map02020 M00151,M00156,M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002,ko01000 3.D.4.3 Bacteria 1MXB0@1224,2KY5E@206389,2VJ8Q@28216,COG3258@1,COG3258@2 NA|NA|NA C Thiosulfate-oxidizing multienzyme system protein SoxA HGDHCNMN_03586 1121035.AUCH01000007_gene469 9.2e-39 166.0 Rhodocyclales soxZ ko:K17226,ko:K17227 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 Bacteria 1N097@1224,2KX4B@206389,2VU95@28216,COG5501@1,COG5501@2 NA|NA|NA S Sulphur oxidation protein SoxZ HGDHCNMN_03587 159087.Daro_3132 1.1e-54 219.5 Rhodocyclales soxY ko:K17226,ko:K17227 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 Bacteria 1RH4J@1224,2KWNG@206389,2VT8I@28216,COG5501@1,COG5501@2 NA|NA|NA S Sulfur oxidation protein SoxY HGDHCNMN_03588 497321.C664_09938 7.7e-133 480.3 Rhodocyclales ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 Bacteria 1QTYW@1224,2KV9A@206389,2VIQV@28216,COG3258@1,COG3258@2,COG4654@1,COG4654@2 NA|NA|NA C Cytochrome C oxidase, cbb3-type, subunit III HGDHCNMN_03589 497321.C664_09943 1.9e-221 775.0 Rhodocyclales soxC ko:K17225 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 Bacteria 1MX9E@1224,2KVXK@206389,2VI1T@28216,COG2041@1,COG2041@2 NA|NA|NA S Mo-co oxidoreductase dimerisation domain HGDHCNMN_03590 748247.AZKH_2860 1.4e-49 202.6 Rhodocyclales ptpA GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 ko:K01104,ko:K20945 ko05111,map05111 ko00000,ko00001,ko01000 Bacteria 1RH90@1224,2KWGB@206389,2VSKW@28216,COG0394@1,COG0394@2 NA|NA|NA T Belongs to the low molecular weight phosphotyrosine protein phosphatase family HGDHCNMN_03591 497321.C664_07053 0.0 1158.7 Rhodocyclales uvrB GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 ko:K03702,ko:K08999 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1MUFK@1224,2KVUA@206389,2VHFQ@28216,COG0556@1,COG0556@2 NA|NA|NA L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage HGDHCNMN_03592 62928.azo1610 1.1e-185 656.0 Rhodocyclales tyrB 2.6.1.1,2.6.1.57 ko:K00813,ko:K00832 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 M00024,M00025,M00034,M00040 R00355,R00694,R00734,R00896,R01731,R02433,R02619,R05052,R07396,R10845 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MUT0@1224,2KUZF@206389,2VHNH@28216,COG1448@1,COG1448@2 NA|NA|NA E Aminotransferase HGDHCNMN_03595 1265502.KB905935_gene3087 1.3e-29 136.3 Betaproteobacteria 2.3.1.178,2.3.1.57,2.3.1.82 ko:K00657,ko:K06718,ko:K18816 ko00260,ko00330,ko01100,ko01120,ko04216,map00260,map00330,map01100,map01120,map04216 M00033,M00135 R01154,R06978 RC00004,RC00096 br01600,ko00000,ko00001,ko00002,ko01000,ko01504 Bacteria 1QW54@1224,2WHT5@28216,COG1670@1,COG1670@2 NA|NA|NA J FR47-like protein HGDHCNMN_03596 1532557.JL37_19330 6.9e-70 270.4 Alcaligenaceae mobA GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061603,GO:0070568,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902757,GO:1902758 2.10.1.1,2.7.7.77 ko:K03750,ko:K03752,ko:K13818 ko00790,ko01100,map00790,map01100 R09735,R11581 RC03462 ko00000,ko00001,ko01000 iAPECO1_1312.APECO1_2604,iEcHS_1320.EcHS_A4080,iEcolC_1368.EcolC_4158,iLF82_1304.LF82_1370,iNRG857_1313.NRG857_19230,iSBO_1134.SBO_3869,iSbBS512_1146.SbBS512_E4329,iUMNK88_1353.UMNK88_4686,ic_1306.c4801 Bacteria 1RH3M@1224,2VQR2@28216,3T6I1@506,COG0746@1,COG0746@2 NA|NA|NA H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor HGDHCNMN_03597 1000565.METUNv1_04052 1.4e-145 522.7 Rhodocyclales moaA GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0040007,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0071944,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22,4.6.1.17 ko:K03639,ko:K20967 ko00790,ko01100,ko04122,map00790,map01100,map04122 R09394,R11372 RC03420,RC03425 ko00000,ko00001,ko01000 Bacteria 1MW3W@1224,2KURW@206389,2VHW4@28216,COG2896@1,COG2896@2 NA|NA|NA H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate HGDHCNMN_03599 159087.Daro_2745 1.7e-150 539.3 Betaproteobacteria Bacteria 1MV9P@1224,2VJFD@28216,COG4097@1,COG4097@2 NA|NA|NA P ferric reductase HGDHCNMN_03600 296591.Bpro_0678 8.7e-305 1052.4 Comamonadaceae katG GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 ko:K03782 ko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110 R00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906 RC00034,RC00213,RC00767,RC02141 ko00000,ko00001,ko01000 Bacteria 1MUBF@1224,2VH5H@28216,4A9PE@80864,COG0376@1,COG0376@2 NA|NA|NA P Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity HGDHCNMN_03601 85643.Tmz1t_2777 4.5e-54 217.2 Rhodocyclales leuA 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS10690,iYO844.BSU28280 Bacteria 1MUNQ@1224,2KU8G@206389,2VI4G@28216,COG0119@1,COG0119@2 NA|NA|NA E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) HGDHCNMN_03602 1123367.C666_13555 1.3e-31 142.5 Rhodocyclales Bacteria 1N1EF@1224,2KWVS@206389,2VU3C@28216,COG3308@1,COG3308@2 NA|NA|NA S Predicted membrane protein (DUF2069) HGDHCNMN_03603 62928.azo3164 1.3e-78 299.3 Rhodocyclales wrbA 1.6.5.2 ko:K03809 ko00130,ko01110,map00130,map01110 R02964,R03643,R03816 RC00819 ko00000,ko00001,ko01000 Bacteria 1MW7N@1224,2KW6M@206389,2VJMC@28216,COG0655@1,COG0655@2 NA|NA|NA S belongs to the wrba family HGDHCNMN_03604 76114.ebA7158 7.5e-82 311.2 Rhodocyclales rbn GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K07058 ko00000 Bacteria 1QICW@1224,2KVY8@206389,2VJNM@28216,COG1295@1,COG1295@2 NA|NA|NA S Virulence factor BrkB HGDHCNMN_03605 748247.AZKH_3482 3.7e-93 349.0 Rhodocyclales Bacteria 1PD07@1224,2C2C7@1,2KWS4@206389,2VSM7@28216,2Z85G@2 NA|NA|NA HGDHCNMN_03606 62928.azo2898 4.7e-33 146.7 Rhodocyclales rpsP GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02959 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 1MZCT@1224,2KWWW@206389,2VTYP@28216,COG0228@1,COG0228@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bS16 family HGDHCNMN_03607 497321.C664_13539 3.7e-61 241.1 Rhodocyclales rimM GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 ko:K02860 ko00000,ko03009 Bacteria 1MWQR@1224,2KWFJ@206389,2VQ0H@28216,COG0806@1,COG0806@2 NA|NA|NA J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes HGDHCNMN_03608 62928.azo2900 7.8e-103 380.2 Rhodocyclales trmD GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228,4.6.1.12 ko:K00554,ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R00597,R05637 RC00002,RC00003,RC00334,RC01440 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 1MUN1@1224,2KUD3@206389,2VHPY@28216,COG0336@1,COG0336@2 NA|NA|NA J Belongs to the RNA methyltransferase TrmD family HGDHCNMN_03609 395495.Lcho_0294 1.8e-08 65.5 unclassified Burkholderiales wzx Bacteria 1KMZA@119065,1RC2S@1224,2VP5H@28216,COG2244@1,COG2244@2 NA|NA|NA S Polysaccharide biosynthesis protein HGDHCNMN_03610 1045855.DSC_04380 8.1e-95 354.4 Xanthomonadales GO:0005575,GO:0005622,GO:0005623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464,GO:0046858 1.18.1.2,1.18.1.3,1.19.1.1 ko:K00528,ko:K02823,ko:K04755,ko:K05784,ko:K08952,ko:K08953,ko:K08954,ko:K15753,ko:K15758,ko:K15765,ko:K16246,ko:K22362 ko00240,ko00361,ko00362,ko00364,ko00621,ko00622,ko00623,ko00625,ko00920,ko01100,ko01120,ko01220,map00240,map00361,map00362,map00364,map00621,map00622,map00623,map00625,map00920,map01100,map01120,map01220 M00537,M00538,M00544,M00548,M00551 R02550,R03560,R03562,R03608,R05288,R05290,R05291,R05414,R05428,R05442,R05443,R05444,R05621,R05622,R05665,R05666,R08100,R08101,R08108,R08109,R08110,R09512,R09513,R10042,R10043,R10159,R11901 RC00046,RC00269,RC00270,RC00490,RC01370,RC01378,RC01383,RC01450,RC01910,RC02556 br01602,ko00000,ko00001,ko00002,ko00194,ko01000 Bacteria 1MXPX@1224,1RSMP@1236,1X6C0@135614,COG0543@1,COG0543@2,COG0633@1,COG0633@2 NA|NA|NA CH Oxidoreductase FAD-binding domain HGDHCNMN_03611 1286093.C266_15442 5.5e-16 90.1 Burkholderiaceae ko:K15383 ko00000,ko02000 9.A.58.2 Bacteria 1KB20@119060,1N759@1224,2VVPU@28216,COG4095@1,COG4095@2 NA|NA|NA S PQ loop repeat HGDHCNMN_03612 1547437.LL06_02850 2.7e-28 132.1 Phyllobacteriaceae Bacteria 1RDM3@1224,2U8FW@28211,43RC9@69277,COG5631@1,COG5631@2 NA|NA|NA K Winged helix DNA-binding domain HGDHCNMN_03613 903818.KI912268_gene1509 9.7e-177 627.1 Bacteria ko:K02014 ko00000,ko02000 1.B.14 Bacteria COG4206@1,COG4206@2 NA|NA|NA H cobalamin-transporting ATPase activity HGDHCNMN_03614 903818.KI912268_gene1510 4.2e-23 114.8 Acidobacteria Bacteria 2E3CB@1,32YBM@2,3Y8J2@57723 NA|NA|NA S Domain of unknown function (DUF4154) HGDHCNMN_03615 748247.AZKH_0193 2.7e-248 865.5 Rhodocyclales gacS 2.7.13.3 ko:K07678,ko:K20973 ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111 M00475,M00820 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1NC9X@1224,2KZWN@206389,2WGIN@28216,COG0784@1,COG0784@2,COG2197@1,COG2197@2,COG2198@1,COG2198@2,COG5002@1,COG5002@2 NA|NA|NA T Histidine Phosphotransfer domain HGDHCNMN_03616 1283284.AZUK01000001_gene2746 2.4e-253 882.1 Aeromonadales Bacteria 1MU2C@1224,1RM8A@1236,1Y3ZA@135624,COG5001@1,COG5001@2 NA|NA|NA T GGDEF domain HGDHCNMN_03617 1000565.METUNv1_03038 7.2e-134 483.8 Rhodocyclales sbcD ko:K03547 ko00000,ko03400 Bacteria 1MY4X@1224,2KXXW@206389,2VJXS@28216,COG0420@1,COG0420@2 NA|NA|NA L Calcineurin-like phosphoesterase HGDHCNMN_03619 640081.Dsui_2045 3.3e-22 110.9 Rhodocyclales Bacteria 1N83H@1224,2KXEK@206389,2VXC4@28216,COG4378@1,COG4378@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2325) HGDHCNMN_03620 1121035.AUCH01000028_gene3263 6.6e-48 197.2 Rhodocyclales ko:K21572 ko00000,ko02000 8.A.46.1,8.A.46.3 Bacteria 1RM59@1224,2KX9B@206389,2VSG5@28216,COG2913@1,COG2913@2 NA|NA|NA J Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane HGDHCNMN_03621 1304883.KI912532_gene771 2.6e-191 674.9 Rhodocyclales tlyC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03699 ko00000,ko02042 Bacteria 1MV3P@1224,2KUPM@206389,2VHBA@28216,COG1253@1,COG1253@2 NA|NA|NA S Domain of unknown function DUF21 HGDHCNMN_03622 264198.Reut_C6172 0.0 1352.4 Burkholderiaceae acxA GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016885,GO:0017144,GO:0018710,GO:0042180,GO:0043443,GO:0044237,GO:0044281,GO:0071704,GO:1901568,GO:1902224 3.5.2.14,3.5.2.9,6.4.1.6 ko:K01469,ko:K01473,ko:K10855 ko00330,ko00480,ko01100,map00330,map00480,map01100 R00251,R03187 RC00553,RC00632 ko00000,ko00001,ko01000 Bacteria 1K22A@119060,1MU2Y@1224,2VJUZ@28216,COG0145@1,COG0145@2 NA|NA|NA EQ 5-oxoprolinase HGDHCNMN_03623 85643.Tmz1t_3470 6.9e-250 869.4 Rhodocyclales acxB GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016885,GO:0017144,GO:0018710,GO:0042180,GO:0043443,GO:0044237,GO:0044281,GO:0071704,GO:1901568,GO:1902224 3.5.2.14,6.4.1.6 ko:K01474,ko:K10854 ko00330,ko01100,map00330,map01100 R03187 RC00632 ko00000,ko00001,ko01000 Bacteria 1QU46@1224,2KVW2@206389,2VI9T@28216,COG0146@1,COG0146@2 NA|NA|NA EQ Hydantoinase B/oxoprolinase HGDHCNMN_03624 62928.azo1296 1e-166 592.8 Rhodocyclales tldD ko:K03568 ko00000,ko01002 Bacteria 1MUSK@1224,2KUU8@206389,2VHJ9@28216,COG0312@1,COG0312@2 NA|NA|NA S modulator of DNA gyrase HGDHCNMN_03625 1304883.KI912532_gene1715 3e-49 202.2 Rhodocyclales Bacteria 1N23T@1224,2KXP3@206389,2VQFG@28216,COG3850@1,COG3850@2 NA|NA|NA T Type IV pili methyl-accepting chemotaxis transducer N-term HGDHCNMN_03627 62928.azo2771 1.8e-47 195.3 Rhodocyclales splB Bacteria 1MW0H@1224,2KUH2@206389,2VIYE@28216,COG1533@1,COG1533@2 NA|NA|NA L Elongator protein 3, MiaB family, Radical SAM HGDHCNMN_03628 76114.ebA1131 1.3e-62 245.7 Rhodocyclales prlC 3.4.24.70 ko:K01414 ko00000,ko01000,ko01002 Bacteria 1MU1K@1224,2KV0N@206389,2VHPQ@28216,COG0339@1,COG0339@2 NA|NA|NA E Oligopeptidase HGDHCNMN_03629 62928.azo2878 1.9e-27 129.0 Rhodocyclales Bacteria 1N7X3@1224,2KWYJ@206389,2VVPB@28216,COG0695@1,COG0695@2 NA|NA|NA O Domain of unknown function (DUF4124) HGDHCNMN_03631 1198452.Jab_2c28380 1.9e-20 107.1 Betaproteobacteria Bacteria 1NN45@1224,2EK5A@1,2VYUE@28216,33DVR@2 NA|NA|NA HGDHCNMN_03632 748247.AZKH_4576 1.9e-165 589.0 Betaproteobacteria XK27_00240 Bacteria 1QRKG@1224,2VPMZ@28216,COG3177@1,COG3177@2 NA|NA|NA S Fic/DOC family HGDHCNMN_03633 62928.azo2880 2.7e-116 424.9 Rhodocyclales xthA 3.1.11.2 ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MVII@1224,2KUPT@206389,2VH7N@28216,COG0708@1,COG0708@2 NA|NA|NA L exodeoxyribonuclease III HGDHCNMN_03634 748247.AZKH_0932 1.3e-82 312.8 Rhodocyclales nnr ko:K01420,ko:K10716,ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko02000,ko03000 1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6 Bacteria 1R6BV@1224,2KVAG@206389,2VN3A@28216,COG0664@1,COG0664@2 NA|NA|NA K COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases HGDHCNMN_03635 62928.azo2883 1.1e-23 115.2 Rhodocyclales Bacteria 1N733@1224,2EGD6@1,2KX8R@206389,2VVS2@28216,33A4Z@2 NA|NA|NA S Protein of unknown function (DUF2892) HGDHCNMN_03636 1458275.AZ34_09360 7.4e-45 187.6 Comamonadaceae ydiY ko:K07283 ko00000 Bacteria 1N6XJ@1224,2VWDA@28216,4AIH4@80864,COG3137@1,COG3137@2 NA|NA|NA M Protein of unknown function, DUF481 HGDHCNMN_03637 95619.PM1_0211885 2.9e-79 302.8 Gammaproteobacteria ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 Bacteria 1MWX5@1224,1S3VB@1236,COG1538@1,COG1538@2 NA|NA|NA MU CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) HGDHCNMN_03638 1005048.CFU_3473 9.3e-255 886.3 Oxalobacteraceae cvaB ko:K11004,ko:K12541,ko:K13409 ko02010,ko03070,ko04626,ko05133,map02010,map03070,map04626,map05133 M00325,M00330,M00339,M00575 ko00000,ko00001,ko00002,ko02000,ko02044 3.A.1.109.1,3.A.1.109.2,3.A.1.109.3,3.A.1.109.4,3.A.1.110 Bacteria 1R2T0@1224,2VP2B@28216,473G4@75682,COG2274@1,COG2274@2 NA|NA|NA V Peptidase C39 family HGDHCNMN_03639 1005048.CFU_3472 1.1e-101 377.1 Oxalobacteraceae ko:K13408 ko04626,map04626 M00339 ko00000,ko00001,ko00002,ko02000,ko02044 8.A.1 Bacteria 1R3R4@1224,2VJDS@28216,472Z8@75682,COG0845@1,COG0845@2 NA|NA|NA M HlyD family secretion protein HGDHCNMN_03641 62928.azo2884 3.2e-112 411.4 Rhodocyclales ksgA GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 ko:K02528 R10716 RC00003,RC03257 ko00000,ko01000,ko03009 Bacteria 1MVNU@1224,2KUK6@206389,2VH15@28216,COG0030@1,COG0030@2 NA|NA|NA J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits HGDHCNMN_03642 1123487.KB892866_gene1665 1.9e-97 362.5 Rhodocyclales rssA ko:K07001 ko00000 Bacteria 1MUM9@1224,2KVP1@206389,2VK14@28216,COG1752@1,COG1752@2 NA|NA|NA S Patatin-like phospholipase HGDHCNMN_03643 62928.azo2885 2.6e-135 488.4 Rhodocyclales pdxA GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050570,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.262,1.1.1.408,1.1.1.409 ko:K00097,ko:K22024 ko00750,ko01100,map00750,map01100 M00124 R05681,R05837,R07406 RC00089,RC00675,RC01475 ko00000,ko00001,ko00002,ko01000 iECO111_1330.ECO111_0056 Bacteria 1MX5W@1224,2KV6F@206389,2VJN0@28216,COG1995@1,COG1995@2 NA|NA|NA H Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) HGDHCNMN_03644 62928.azo2886 9.9e-143 513.5 Rhodocyclales surA GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022607,GO:0030288,GO:0030313,GO:0031647,GO:0031975,GO:0033218,GO:0036211,GO:0042277,GO:0042597,GO:0043163,GO:0043165,GO:0043170,GO:0043412,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0044764,GO:0045229,GO:0050821,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0060274,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564 5.2.1.8 ko:K03769,ko:K03771 ko00000,ko01000,ko03110 Bacteria 1MVB3@1224,2KU74@206389,2VHHS@28216,COG0760@1,COG0760@2 NA|NA|NA O Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation HGDHCNMN_03645 76114.ebA1141 1.3e-212 746.5 Rhodocyclales lptD GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008150,GO:0008509,GO:0008514,GO:0008643,GO:0009279,GO:0009636,GO:0009987,GO:0010876,GO:0015075,GO:0015136,GO:0015144,GO:0015157,GO:0015267,GO:0015288,GO:0015318,GO:0015478,GO:0015711,GO:0015739,GO:0015772,GO:0015849,GO:0015920,GO:0016020,GO:0016021,GO:0016043,GO:0019867,GO:0022607,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031975,GO:0033036,GO:0034219,GO:0034220,GO:0042221,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045203,GO:0045229,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0098656,GO:1901264,GO:1901505,GO:1903825,GO:1905039 ko:K04744,ko:K22110 ko00000,ko02000 1.B.35.1,1.B.35.2,1.B.42.1 iG2583_1286.G2583_0058,ic_1306.c5389 Bacteria 1MUJC@1224,2KVBE@206389,2VIJ7@28216,COG1452@1,COG1452@2 NA|NA|NA M Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane HGDHCNMN_03646 748247.AZKH_0926 4.2e-141 507.7 Rhodocyclales GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 ko:K07102 ko00520,ko01100,map00520,map01100 R08968,R11024 RC00002,RC00078 ko00000,ko00001,ko01000 Bacteria 1MXCH@1224,2KUFJ@206389,2VHBC@28216,COG3178@1,COG3178@2 NA|NA|NA S phosphotransferase related to Ser Thr protein kinases HGDHCNMN_03647 497321.C664_14364 5.1e-90 337.4 Rhodocyclales rmlA GO:0000166,GO:0000270,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006040,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019752,GO:0030203,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044281,GO:0046872,GO:0070569,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.7.13,2.7.7.24,2.7.7.99 ko:K00966,ko:K00973,ko:K00992 ko00051,ko00520,ko00521,ko00523,ko00525,ko01100,ko01110,ko01130,map00051,map00520,map00521,map00523,map00525,map01100,map01110,map01130 M00114,M00361,M00362,M00793 R00885,R02328,R11025 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1R9ZD@1224,2KV5Z@206389,2VJUN@28216,COG1208@1,COG1208@2 NA|NA|NA JM Nucleotidyl transferase HGDHCNMN_03648 864051.BurJ1DRAFT_4707 4.4e-69 269.2 Betaproteobacteria Bacteria 1P3WQ@1224,2W5I1@28216,COG3391@1,COG3391@2 NA|NA|NA S amine dehydrogenase activity HGDHCNMN_03649 85643.Tmz1t_1451 2.5e-178 631.7 Rhodocyclales pepP 3.4.11.9 ko:K01262 ko00000,ko01000,ko01002 Bacteria 1MUZS@1224,2KUHQ@206389,2VHQI@28216,COG0006@1,COG0006@2 NA|NA|NA E aminopeptidase HGDHCNMN_03650 85643.Tmz1t_1450 1.2e-128 466.5 Rhodocyclales ubiH GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008681,GO:0009058,GO:0009108,GO:0009314,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016705,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0050896,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901576,GO:1901661,GO:1901663 ko:K03185,ko:K18800 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04987,R04989,R08768,R08773 RC00046,RC02670 ko00000,ko00001,ko00002,ko01000 iB21_1397.B21_02702,iECBD_1354.ECBD_0830,iECB_1328.ECB_02739,iECD_1391.ECD_02739,iEcHS_1320.EcHS_A3066 Bacteria 1MU6I@1224,2KV4R@206389,2VKV7@28216,COG0654@1,COG0654@2 NA|NA|NA CH UbiH UbiF VisC COQ6 family HGDHCNMN_03651 497321.C664_18002 8e-194 683.3 Rhodocyclales mgtE ko:K06213 ko00000,ko02000 1.A.26.1 Bacteria 1MW24@1224,2KUHE@206389,2VI29@28216,COG2239@1,COG2239@2 NA|NA|NA P Acts as a magnesium transporter HGDHCNMN_03652 76114.ebA1743 3.3e-115 421.4 Rhodocyclales hemL GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016853,GO:0016866,GO:0016869,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042286,GO:0042440,GO:0042802,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 5.4.3.8 ko:K01845 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02272 RC00677 ko00000,ko00001,ko00002,ko01000,ko01007 iSB619.SA_RS08395,iUMNK88_1353.UMNK88_158 Bacteria 1MUY5@1224,2KUUJ@206389,2VHK9@28216,COG0001@1,COG0001@2 NA|NA|NA H Aminotransferase HGDHCNMN_03653 1458357.BG58_33955 3.5e-210 738.0 Burkholderiaceae xylR ko:K02481 ko00000,ko02022 Bacteria 1KIHC@119060,1MU0N@1224,2WH2X@28216,COG2204@1,COG2204@2 NA|NA|NA T Activator of aromatic catabolism HGDHCNMN_03655 1129374.AJE_02581 2.9e-193 681.4 Alteromonadaceae benA 1.14.12.10 ko:K05549 ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00362,map00364,map00622,map01100,map01120,map01220 M00551 R05290,R05291,R05428,R05621,R05622,R05665,R08100,R08101,R08108,R08109,R08110 RC00270,RC01378,RC01450,RC01910 br01602,ko00000,ko00001,ko00002,ko01000 Bacteria 1N6MJ@1224,1RYGT@1236,466BG@72275,COG4638@1,COG4638@2 NA|NA|NA P COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit HGDHCNMN_03656 351746.Pput_2553 1.6e-53 215.7 Pseudomonas putida group benB 1.14.12.10 ko:K05550 ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00362,map00364,map00622,map01100,map01120,map01220 M00551 R05290,R05291,R05428,R05621,R05622,R05665,R08100,R08101,R08108,R08109,R08110 RC00270,RC01378,RC01450,RC01910 br01602,ko00000,ko00001,ko00002,ko01000 iJN746.PP_3162,iYL1228.KPN_01871 Bacteria 1RAJU@1224,1T1E9@1236,1YYKP@136845,COG5517@1,COG5517@2 NA|NA|NA Q PFAM aromatic-ring-hydroxylating dioxygenase beta subunit HGDHCNMN_03657 1469613.JT55_07775 2.8e-108 398.7 Alphaproteobacteria pyrK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.3.1.14,3.5.2.3 ko:K01465,ko:K02823,ko:K05784,ko:K11311,ko:K17828 ko00240,ko00362,ko00364,ko00622,ko00627,ko01100,ko01120,ko01220,map00240,map00362,map00364,map00622,map00627,map01100,map01120,map01220 M00051,M00551,M00637 R00823,R00825,R01869,R01993,R05290,R05291,R05428,R05621,R05622,R05665,R08100,R08101,R08108,R08109,R08110 RC00051,RC00192,RC00270,RC00632,RC01378,RC01450,RC01910 br01602,ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS17580 Bacteria 1MV72@1224,2TR2K@28211,COG0543@1,COG0543@2,COG1018@1,COG1018@2 NA|NA|NA C Oxidoreductase FAD NAD(P)-binding domain protein HGDHCNMN_03658 279714.FuraDRAFT_1931 3.9e-102 377.9 Betaproteobacteria Bacteria 1MW50@1224,2VIAR@28216,COG1028@1,COG1028@2 NA|NA|NA IQ Belongs to the short-chain dehydrogenases reductases (SDR) family HGDHCNMN_03661 1223521.BBJX01000004_gene2442 3.1e-60 238.8 Comamonadaceae ko:K02509 ko00350,ko01120,map00350,map01120 R04132,R06897 RC01615,RC02595 ko00000,ko00001,ko01000 Bacteria 1R3UP@1224,2VNA2@28216,4ABDW@80864,COG3971@1,COG3971@2 NA|NA|NA Q PFAM fumarylacetoacetate (FAA) hydrolase HGDHCNMN_03662 75379.Tint_2785 3.8e-92 344.7 unclassified Burkholderiales tupA ko:K05772 ko02010,map02010 M00186 ko00000,ko00001,ko00002,ko02000 3.A.1.6.2,3.A.1.6.4 Bacteria 1KJCS@119065,1MVSF@1224,2VJQG@28216,COG2998@1,COG2998@2 NA|NA|NA H PBP superfamily domain HGDHCNMN_03663 76114.ebA5014 6.3e-91 340.5 Rhodocyclales 3.6.3.55 ko:K02065,ko:K02068,ko:K02071,ko:K05773,ko:K06857 ko02010,map02010 M00186,M00210,M00211,M00238,M00669,M00670 R10531 RC00002 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.24,3.A.1.27,3.A.1.6.2,3.A.1.6.4 Bacteria 1MWKQ@1224,2KUWT@206389,2VJYN@28216,COG1126@1,COG1126@2 NA|NA|NA P Belongs to the ABC transporter superfamily HGDHCNMN_03664 85643.Tmz1t_2806 1e-85 323.2 Rhodocyclales tupB 3.6.3.55 ko:K05773,ko:K06857 ko02010,map02010 M00186 R10531 RC00002 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.6.2,3.A.1.6.4 Bacteria 1MZVS@1224,2KVSG@206389,2VNEC@28216,COG4662@1,COG4662@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component HGDHCNMN_03665 76114.ebA5010 7e-15 86.7 Rhodocyclales Bacteria 1NBC7@1224,2EEMQ@1,2KXF2@206389,2VWPQ@28216,338FK@2 NA|NA|NA HGDHCNMN_03666 305700.B447_01746 6.5e-27 126.3 Rhodocyclales ko:K09122 ko00000 Bacteria 1N9VX@1224,2KZAT@206389,2VVYE@28216,COG2104@1,COG2104@2 NA|NA|NA H Mut7-C ubiquitin HGDHCNMN_03667 305700.B447_01751 3.2e-186 657.9 Rhodocyclales 1.7.1.15 ko:K00362,ko:K18559 ko00720,ko00910,ko01120,ko01200,map00720,map00910,map01120,map01200 M00173,M00530 R00402,R00787 RC00045,RC00176 ko00000,ko00001,ko00002,ko01000 Bacteria 1NR3M@1224,2KVRE@206389,2VKIS@28216,COG0446@1,COG0446@2 NA|NA|NA S FAD-dependent pyridine HGDHCNMN_03668 62928.azo2930 0.0 1116.7 Rhodocyclales aorA 1.2.7.5 ko:K03738 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 M00309 R08571 RC00242 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWBB@1224,2KVX2@206389,2VJ8P@28216,COG2414@1,COG2414@2 NA|NA|NA C aldehyde ferredoxin oxidoreductase HGDHCNMN_03669 305700.B447_01761 2.6e-69 268.1 Rhodocyclales Bacteria 1MWE1@1224,2KW51@206389,2VJ9U@28216,COG1142@1,COG1142@2 NA|NA|NA C 4Fe-4S ferredoxin, iron-sulfur binding HGDHCNMN_03670 76114.ebA1078 1.8e-157 562.4 Rhodocyclales moeA1 2.10.1.1 ko:K03750 ko00790,ko01100,map00790,map01100 R09735 RC03462 ko00000,ko00001,ko01000 Bacteria 1MVD5@1224,2KXQK@206389,2VH78@28216,COG0303@1,COG0303@2 NA|NA|NA H Molybdopterin biosynthesis HGDHCNMN_03671 395495.Lcho_2389 3.7e-126 458.0 unclassified Burkholderiales ko:K07282 ko00000 Bacteria 1KK0I@119065,1P1MG@1224,2VIGZ@28216,COG2843@1,COG2843@2 NA|NA|NA M Bacterial capsule synthesis protein PGA_cap HGDHCNMN_03672 1123487.KB892835_gene3421 3.4e-33 147.9 Rhodocyclales Bacteria 1N0U4@1224,2E2Z5@1,2KZ2Z@206389,2VUC1@28216,32VPF@2 NA|NA|NA HGDHCNMN_03673 85643.Tmz1t_1614 1.7e-305 1054.7 Rhodocyclales prpE GO:0003674,GO:0003824,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0050218 6.2.1.1,6.2.1.17 ko:K01895,ko:K01908 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1MUF5@1224,2KV9F@206389,2VI3T@28216,COG0365@1,COG0365@2 NA|NA|NA I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases HGDHCNMN_03674 62928.azo3180 5.5e-116 424.5 Rhodocyclales Bacteria 1R59V@1224,2KUR6@206389,2VN7N@28216,COG2199@1,COG3706@2 NA|NA|NA T COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain HGDHCNMN_03675 305700.B447_17796 2.6e-143 515.0 Rhodocyclales 1.1.1.1,1.6.5.5 ko:K00001,ko:K00344 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 Bacteria 1MV3W@1224,2KU9K@206389,2VINX@28216,COG0604@1,COG0604@2 NA|NA|NA C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases HGDHCNMN_03676 748247.AZKH_1080 1.1e-89 336.7 Rhodocyclales Bacteria 1R4ZN@1224,2KVUP@206389,2VQ1P@28216,COG1639@1,COG1639@2 NA|NA|NA T HDOD domain HGDHCNMN_03677 497321.C664_14609 2.6e-269 934.5 Rhodocyclales uup GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 ko:K15738 ko00000,ko02000 3.A.1.120.6 Bacteria 1MU37@1224,2KUGP@206389,2VH4J@28216,COG0488@1,COG0488@2 NA|NA|NA S ABC transporter HGDHCNMN_03679 85643.Tmz1t_3516 6.4e-13 79.7 Rhodocyclales bfd ko:K02192 ko00000 Bacteria 1NGGY@1224,2KX62@206389,2VWVZ@28216,COG2906@1,COG2906@2 NA|NA|NA P BFD-like [2Fe-2S] binding domain HGDHCNMN_03680 497321.C664_15963 3.4e-72 277.7 Rhodocyclales bfr 1.16.3.1 ko:K03594 ko00860,map00860 R00078 RC02758 ko00000,ko00001,ko01000 Bacteria 1RCW7@1224,2KW26@206389,2VPZP@28216,COG2193@1,COG2193@2 NA|NA|NA P iron-storage protein HGDHCNMN_03682 748247.AZKH_2161 6.6e-143 513.8 Rhodocyclales ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1MXR4@1224,2KUJ9@206389,2VHP9@28216,COG0683@1,COG0683@2 NA|NA|NA E Receptor family ligand binding region HGDHCNMN_03683 76114.ebA5317 2.9e-228 798.1 Rhodocyclales fadD2 6.2.1.34 ko:K12508 ko00000,ko01000 Bacteria 1MUQZ@1224,2KVEV@206389,2VIB6@28216,COG0318@1,COG0318@2 NA|NA|NA IQ AMP-binding enzyme HGDHCNMN_03684 266265.Bxe_C0923 1.9e-77 295.8 Burkholderiaceae 4.2.1.155 ko:K20036 ko00920,map00920 R10936 RC00004,RC03306,RC03307 ko00000,ko00001,ko01000 Bacteria 1K7GF@119060,1MWYZ@1224,2VJYU@28216,COG1024@1,COG1024@2 NA|NA|NA I Belongs to the enoyl-CoA hydratase isomerase family HGDHCNMN_03685 76114.ebA5319 2e-169 602.1 Rhodocyclales bktB 2.3.1.16,2.3.1.9 ko:K00626,ko:K07508 ko00062,ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00062,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00085,M00087,M00088,M00095,M00373,M00374,M00375 R00238,R00391,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747 RC00004,RC00326,RC00405,RC01702 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MU5G@1224,2KUHN@206389,2VM9J@28216,COG0183@1,COG0183@2 NA|NA|NA I Thiolase, C-terminal domain HGDHCNMN_03686 85643.Tmz1t_2490 1.6e-92 345.9 Rhodocyclales Bacteria 1MUBQ@1224,2KY91@206389,2VHU8@28216,COG1028@1,COG1028@2 NA|NA|NA IQ KR domain HGDHCNMN_03687 62928.azo0364 7e-38 163.7 Rhodocyclales Bacteria 1PJUW@1224,2KW9S@206389,2VHEZ@28216,COG5652@1,COG5652@2 NA|NA|NA S VanZ like family HGDHCNMN_03688 497321.C664_19096 5.7e-41 173.3 Rhodocyclales fdx Bacteria 1MZR4@1224,2KWNM@206389,2VTY1@28216,COG3411@1,COG3411@2 NA|NA|NA C ferredoxin HGDHCNMN_03689 76114.ebA3584 4.3e-91 340.9 Rhodocyclales ko:K07018 ko00000 Bacteria 1MUDY@1224,2KV03@206389,2VJ8M@28216,COG2945@1,COG2945@2 NA|NA|NA S hydrolase of the alpha beta superfamily HGDHCNMN_03690 497321.C664_19106 8.6e-65 253.4 Rhodocyclales yibF GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 Bacteria 1RHSK@1224,2KVP9@206389,2VIJ5@28216,COG0625@1,COG0625@2 NA|NA|NA O Glutathione S-transferase HGDHCNMN_03691 62928.azo0360 5.1e-133 480.7 Rhodocyclales nodI ko:K01990,ko:K09695 ko02010,map02010 M00252,M00254 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.102 Bacteria 1MUX3@1224,2KUZV@206389,2VI3G@28216,COG1131@1,COG1131@2 NA|NA|NA V AAA domain, putative AbiEii toxin, Type IV TA system HGDHCNMN_03692 76114.ebA3579 4.8e-92 344.4 Rhodocyclales nodJ ko:K01992,ko:K09694 ko02010,map02010 M00252,M00254 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.102 Bacteria 1N55T@1224,2KVIE@206389,2VJ7R@28216,COG0842@1,COG0842@2 NA|NA|NA V ABC-2 type transporter HGDHCNMN_03693 1235457.C404_27230 1.7e-33 148.7 Burkholderiaceae cutA GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0016043,GO:0022607,GO:0042221,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0046688,GO:0046872,GO:0046914,GO:0050896,GO:0051259,GO:0051260,GO:0065003,GO:0071840 4.2.3.1 ko:K01733,ko:K03926 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 Bacteria 1K8SA@119060,1N6TN@1224,2VUC8@28216,COG1324@1,COG1324@2 NA|NA|NA P tolerance protein HGDHCNMN_03694 748247.AZKH_0443 3e-206 724.9 Rhodocyclales dsbD GO:0003674,GO:0003756,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008152,GO:0009266,GO:0009628,GO:0009898,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016021,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0017004,GO:0019725,GO:0022607,GO:0031224,GO:0031226,GO:0034622,GO:0042221,GO:0042493,GO:0042592,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0055114,GO:0065003,GO:0065007,GO:0065008,GO:0071502,GO:0071840,GO:0071944,GO:0098552,GO:0098562,GO:0140096 1.8.1.8 ko:K04084 ko00000,ko01000,ko03110 5.A.1.1 iECSE_1348.ECSE_4435 Bacteria 1MU8W@1224,2KV4F@206389,2VI8I@28216,COG4232@1,COG4232@2 NA|NA|NA CO Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps HGDHCNMN_03695 748247.AZKH_0543 1.5e-253 881.7 Rhodocyclales ahcY GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 ko:K01251 ko00270,ko01100,map00270,map01100 M00035 R00192,R04936 RC00056,RC00069,RC01161,RC01243 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 Bacteria 1MUQ2@1224,2KVI2@206389,2VH57@28216,COG0499@1,COG0499@2 NA|NA|NA H May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine HGDHCNMN_03696 1163617.SCD_n00423 6.1e-34 150.2 Proteobacteria Bacteria 1QU0X@1224,2DNS7@1,32YWC@2 NA|NA|NA S 23S rRNA-intervening sequence protein HGDHCNMN_03697 85643.Tmz1t_3844 5.6e-118 430.6 Rhodocyclales metF GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 M00377 R01224,R07168 RC00081 ko00000,ko00001,ko00002,ko01000 iPC815.YPO0117,iSBO_1134.SBO_3961 Bacteria 1MUC9@1224,2KUZ9@206389,2VHHI@28216,COG0685@1,COG0685@2 NA|NA|NA E 5,10-methylenetetrahydrofolate reductase HGDHCNMN_03698 76114.ebD108 8.3e-31 139.4 Rhodocyclales Bacteria 1N2YE@1224,2KZFY@206389,2VU46@28216,COG0484@1,COG0484@2 NA|NA|NA O DnaJ molecular chaperone homology domain HGDHCNMN_03699 76114.ebA6224 2.7e-43 181.8 Rhodocyclales Bacteria 1N09W@1224,2CVC8@1,2KZA6@206389,2VUXV@28216,32SXC@2 NA|NA|NA HGDHCNMN_03700 76114.ebA6226 6.3e-89 334.0 Rhodocyclales Bacteria 1NZQJ@1224,2CD05@1,2KYVG@206389,2VJQJ@28216,2ZBBX@2 NA|NA|NA HGDHCNMN_03701 76114.ebA6228 6.5e-112 411.0 Rhodocyclales Bacteria 1R8H7@1224,28MED@1,2KYNI@206389,2VJ4A@28216,2ZAS1@2 NA|NA|NA HGDHCNMN_03703 983917.RGE_15530 6.7e-103 380.2 unclassified Burkholderiales pnp GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 M00394 R00437,R00438,R00439,R00440 RC02795 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Bacteria 1KJ8C@119065,1MVB9@1224,2VI1P@28216,COG1185@1,COG1185@2 NA|NA|NA J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction HGDHCNMN_03705 62928.azo2076 4.6e-160 571.2 Rhodocyclales nnrD GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 ko:K17758,ko:K17759 ko00000,ko01000 Bacteria 1MU1Q@1224,2KU9G@206389,2VJZD@28216,COG0062@1,COG0062@2,COG0063@1,COG0063@2 NA|NA|NA H Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration HGDHCNMN_03706 640081.Dsui_0440 2.1e-62 246.1 Rhodocyclales Bacteria 1R4P9@1224,2KW2Y@206389,2VPZE@28216,COG1639@1,COG1639@2 NA|NA|NA T Signal transduction protein HGDHCNMN_03708 365044.Pnap_2108 1.9e-60 238.8 Comamonadaceae ko:K05548 ko00000,ko02000 2.A.1.15 Bacteria 1P24P@1224,2VIKS@28216,4AJZ0@80864,COG2271@1,COG2271@2 NA|NA|NA G Uncharacterised MFS-type transporter YbfB HGDHCNMN_03709 1415779.JOMH01000001_gene816 6.8e-133 480.3 Xanthomonadales xylE 1.13.11.2 ko:K00446 ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220 M00569 R00816,R04089,R05295,R05404,R05406,R07795 RC00387,RC00643,RC01075,RC01364,RC01914 br01602,ko00000,ko00001,ko00002,ko01000 Bacteria 1MUWY@1224,1RY4A@1236,1X981@135614,COG0346@1,COG0346@2 NA|NA|NA E COG0346 Lactoylglutathione lyase and related lyases HGDHCNMN_03710 305700.B447_11207 3.2e-265 920.6 Betaproteobacteria dmpC 1.2.1.32,1.2.1.85 ko:K10217 ko00362,ko00380,ko00622,ko01100,ko01120,ko01220,map00362,map00380,map00622,map01100,map01120,map01220 M00038,M00569 R02762,R03889,R05353 RC00218,RC00254 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU1V@1224,2VHNV@28216,COG1012@1,COG1012@2 NA|NA|NA C belongs to the aldehyde dehydrogenase family HGDHCNMN_03711 395495.Lcho_3344 3.5e-125 454.5 unclassified Burkholderiales 3.7.1.9 ko:K10216,ko:K18092 ko00362,ko00622,ko00642,ko00643,ko01100,ko01120,ko01220,map00362,map00622,map00642,map00643,map01100,map01120,map01220 M00569 R02604,R05362,R05366,R05865 RC00272,RC00752,RC00753,RC00754,RC00755,RC01337,RC01485 br01602,ko00000,ko00001,ko00002,ko01000 Bacteria 1KJZB@119065,1MVTG@1224,2VJIF@28216,COG0596@1,COG0596@2 NA|NA|NA S Serine aminopeptidase, S33 HGDHCNMN_03712 1175306.GWL_17900 1.1e-117 429.5 Oxalobacteraceae 4.2.1.132,4.2.1.80 ko:K02554,ko:K18364 ko00360,ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00360,map00362,map00621,map00622,map01100,map01120,map01220 M00545,M00569 R02601,R04781,R05864 RC00750,RC01213,RC02676 br01602,ko00000,ko00001,ko00002,ko01000 Bacteria 1MVVV@1224,2VH5E@28216,47702@75682,COG3971@1,COG3971@2 NA|NA|NA Q Fumarylacetoacetate (FAA) hydrolase family HGDHCNMN_03713 305700.B447_11217 2.4e-123 448.4 Rhodocyclales dmpH 4.1.1.77 ko:K01617 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 M00569 R02602,R05374 RC00751,RC02672 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVVV@1224,2KUEN@206389,2VH5Y@28216,COG3971@1,COG3971@2 NA|NA|NA Q 4-Oxalocrotonate decarboxylase HGDHCNMN_03714 85643.Tmz1t_3095 0.0 2044.6 Rhodocyclales 1.2.7.11,1.2.7.3,1.2.7.8 ko:K00175,ko:K04090 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1NR1S@1224,2KY6D@206389,2W0HM@28216,COG1014@1,COG1014@2,COG4231@1,COG4231@2 NA|NA|NA C Pyruvate ferredoxin/flavodoxin oxidoreductase HGDHCNMN_03715 1163617.SCD_n00487 4.6e-10 70.9 Betaproteobacteria yrvD ko:K08992 ko00000 Bacteria 1NHWZ@1224,2VY5H@28216,COG5416@1,COG5416@2 NA|NA|NA S Pfam:DUF1049 HGDHCNMN_03716 1304883.KI912532_gene3252 0.0 1482.6 Rhodocyclales alaS GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0002161,GO:0002196,GO:0003674,GO:0003700,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006355,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iECABU_c1320.ECABU_c29670,iECED1_1282.ECED1_3146,iEcHS_1320.EcHS_A2833,iJN746.PP_4474 Bacteria 1MU9A@1224,2KVJ1@206389,2VH6Z@28216,COG0013@1,COG0013@2 NA|NA|NA J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain HGDHCNMN_03717 62928.azo2781 8.6e-88 329.7 Rhodocyclales yvqK GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.2.1.88,1.5.5.2,2.5.1.17 ko:K00798,ko:K13821 ko00250,ko00330,ko00860,ko01100,ko01110,ko01130,map00250,map00330,map00860,map01100,map01110,map01130 M00122 R00245,R00707,R00708,R01253,R01492,R04444,R04445,R05051,R05220,R07268 RC00080,RC00083,RC00216,RC00242,RC00255,RC00533 ko00000,ko00001,ko00002,ko01000,ko03000 Bacteria 1RDUF@1224,2KW5B@206389,2VQ7P@28216,COG2096@1,COG2096@2 NA|NA|NA S Cobalamin adenosyltransferase HGDHCNMN_03718 76114.ebA4456 8.9e-118 429.9 Rhodocyclales murI GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008881,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.3 ko:K01776 ko00471,ko01100,map00471,map01100 R00260 RC00302 ko00000,ko00001,ko01000,ko01011 Bacteria 1NAI2@1224,2KWPX@206389,2VQ46@28216,COG0796@1,COG0796@2 NA|NA|NA M Provides the (R)-glutamate required for cell wall biosynthesis HGDHCNMN_03719 1000565.METUNv1_03994 9.9e-58 230.3 Rhodocyclales 2.7.7.80 ko:K21029 ko04122,map04122 R07459 RC00043 ko00000,ko00001,ko01000 Bacteria 1RHJV@1224,2KXDP@206389,2VTQ0@28216,COG0476@1,COG0476@2 NA|NA|NA H Involved in molybdopterin and thiamine biosynthesis, family 2 HGDHCNMN_03720 497321.C664_03000 6.4e-142 510.4 Rhodocyclales queG GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 ko:K18979 ko00000,ko01000,ko03016 Bacteria 1MV1H@1224,2KUCX@206389,2VI7V@28216,COG1600@1,COG1600@2 NA|NA|NA C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) HGDHCNMN_03721 748247.AZKH_1200 3.8e-43 181.4 Rhodocyclales yjeE GO:0000166,GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043531,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.1.221,5.1.1.1 ko:K01775,ko:K06925,ko:K07102,ko:K07452 ko00473,ko00520,ko01100,ko01502,map00473,map00520,map01100,map01502 R00401,R08968,R11024 RC00002,RC00078,RC00285 ko00000,ko00001,ko01000,ko01011,ko02048,ko03016 Bacteria 1RGYU@1224,2KWJA@206389,2VSJY@28216,COG0802@1,COG0802@2 NA|NA|NA S Threonylcarbamoyl adenosine biosynthesis protein TsaE HGDHCNMN_03724 748247.AZKH_0963 1.7e-120 439.1 Rhodocyclales purC GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 ko:K01923,ko:K01945,ko:K03566 ko00230,ko01100,ko01110,ko01130,ko02026,map00230,map01100,map01110,map01130,map02026 M00048 R04144,R04591 RC00064,RC00090,RC00162,RC00166 ko00000,ko00001,ko00002,ko01000,ko03000 Bacteria 1MUR9@1224,2KUQQ@206389,2VGZK@28216,COG0152@1,COG0152@2 NA|NA|NA F Belongs to the SAICAR synthetase family HGDHCNMN_03725 62928.azo2872 9.2e-149 533.5 Rhodocyclales Bacteria 1MVI2@1224,2KV33@206389,2VIAD@28216,COG4949@1,COG4949@2 NA|NA|NA S Protein of unknown function (DUF3422) HGDHCNMN_03726 265072.Mfla_0884 1.5e-11 75.9 Nitrosomonadales Bacteria 1NBTY@1224,2BZ72@1,2KND0@206350,2VYC4@28216,32Z0T@2 NA|NA|NA HGDHCNMN_03727 62928.azo2843 2.7e-178 631.3 Rhodocyclales fba 4.1.2.13 ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 iJN746.PP_4960 Bacteria 1MURX@1224,2KVGR@206389,2VHGI@28216,COG0191@1,COG0191@2 NA|NA|NA G Aldolase HGDHCNMN_03728 305700.B447_09138 4.7e-226 790.4 Rhodocyclales pykA GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016043,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042802,GO:0042866,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.40 ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050 R00200,R00430,R01138,R01858,R02320 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 e_coli_core.b1854,iAF1260.b1854,iB21_1397.B21_01813,iBWG_1329.BWG_1668,iEC042_1314.EC042_2021,iECBD_1354.ECBD_1784,iECB_1328.ECB_01825,iECDH10B_1368.ECDH10B_1995,iECDH1ME8569_1439.ECDH1ME8569_1801,iECD_1391.ECD_01825,iECO103_1326.ECO103_2044,iECO111_1330.ECO111_2362,iECO26_1355.ECO26_2692,iECUMN_1333.ECUMN_2152,iETEC_1333.ETEC_1887,iEcDH1_1363.EcDH1_1786,iEcE24377_1341.EcE24377A_2084,iEcHS_1320.EcHS_A1947,iEcSMS35_1347.EcSMS35_1332,iEcolC_1368.EcolC_1778,iG2583_1286.G2583_2306,iJO1366.b1854,iJR904.b1854,iSBO_1134.SBO_1162,iSSON_1240.SSON_1294,iSbBS512_1146.SbBS512_E2130,iUMNK88_1353.UMNK88_2326,iY75_1357.Y75_RS09740 Bacteria 1MU21@1224,2KV4V@206389,2VHN5@28216,COG0469@1,COG0469@2 NA|NA|NA G Belongs to the pyruvate kinase family HGDHCNMN_03729 1000565.METUNv1_00058 9.3e-153 547.4 Betaproteobacteria Bacteria 1MU2C@1224,2WI5T@28216,COG3614@1,COG3614@2,COG5001@1,COG5001@2 NA|NA|NA T diguanylate cyclase HGDHCNMN_03730 748247.AZKH_4230 5.3e-179 633.6 Rhodocyclales rfbB GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008460,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 4.2.1.46 ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 M00793 R06513 RC00402 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU5E@1224,2KV8P@206389,2VJAD@28216,COG1088@1,COG1088@2 NA|NA|NA M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily HGDHCNMN_03731 395494.Galf_2829 6e-115 420.6 Nitrosomonadales rfbD GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008831,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016491,GO:0016614,GO:0016616,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0045226,GO:0046379,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 1.1.1.133 ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777 RC00182 ko00000,ko00001,ko00002,ko01000 iECSF_1327.ECSF_1929,iEcHS_1320.EcHS_A2180 Bacteria 1MUXM@1224,2VI50@28216,44VGA@713636,COG1091@1,COG1091@2 NA|NA|NA C Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose HGDHCNMN_03732 305700.B447_07457 8.2e-141 506.5 Rhodocyclales rfbA GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005996,GO:0006006,GO:0006139,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008879,GO:0009058,GO:0009059,GO:0009117,GO:0009141,GO:0009147,GO:0009200,GO:0009211,GO:0009219,GO:0009225,GO:0009226,GO:0009262,GO:0009394,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019299,GO:0019300,GO:0019305,GO:0019318,GO:0019319,GO:0019438,GO:0019637,GO:0019692,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045226,GO:0046075,GO:0046364,GO:0046379,GO:0046383,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0334,iSDY_1059.SDY_2206,iSF_1195.SF2102,iSFxv_1172.SFxv_2338,iS_1188.S2225 Bacteria 1MU0X@1224,2KUS3@206389,2VHA6@28216,COG1209@1,COG1209@2 NA|NA|NA H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis HGDHCNMN_03733 266264.Rmet_2732 1.5e-76 292.4 Burkholderiaceae rmlC 5.1.3.13 ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R06514 RC01531 ko00000,ko00001,ko00002,ko01000 Bacteria 1K0BA@119060,1R9YD@1224,2VQ02@28216,COG1898@1,COG1898@2 NA|NA|NA M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose HGDHCNMN_03734 1502852.FG94_04474 4.8e-154 550.8 Oxalobacteraceae wecB 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1QUYI@1224,2WFJ1@28216,47407@75682,COG0381@1,COG0381@2 NA|NA|NA G UDP-N-acetylglucosamine 2-epimerase HGDHCNMN_03737 111781.Lepto7376_0638 3.1e-09 67.4 Bacteria Bacteria COG2815@1,COG2815@2 NA|NA|NA G serine threonine protein kinase HGDHCNMN_03738 522306.CAP2UW1_0479 9.1e-44 184.9 Betaproteobacteria ko:K21449 ko00000,ko02000 1.B.40.2 Bacteria 1NHDM@1224,2W6BN@28216,COG4675@1,COG4675@2 NA|NA|NA S tail collar domain protein HGDHCNMN_03739 298654.FraEuI1c_7061 4e-22 112.8 Bacteria Bacteria 2EJNR@1,33DDM@2 NA|NA|NA HGDHCNMN_03740 1297742.A176_01420 1.6e-18 99.4 Bacteria Bacteria 2E8EM@1,332T0@2 NA|NA|NA HGDHCNMN_03743 1469613.JT55_07060 7.3e-134 483.4 Rhodovulum nadA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0030312,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 ko:K03517 ko00760,ko01100,map00760,map01100 M00115 R04292 RC01119 ko00000,ko00001,ko00002,ko01000 iAF1260.b0750,iAPECO1_1312.APECO1_1338,iB21_1397.B21_00692,iBWG_1329.BWG_0602,iECBD_1354.ECBD_2917,iECB_1328.ECB_00703,iECDH10B_1368.ECDH10B_0817,iECDH1ME8569_1439.ECDH1ME8569_0703,iECD_1391.ECD_00703,iECED1_1282.ECED1_0711,iECOK1_1307.ECOK1_0750,iECP_1309.ECP_0761,iECS88_1305.ECS88_0766,iECSP_1301.ECSP_0802,iECs_1301.ECs0778,iETEC_1333.ETEC_0754,iEcDH1_1363.EcDH1_2892,iEcolC_1368.EcolC_2912,iHN637.CLJU_RS12020,iJN746.PP_1231,iJO1366.b0750,iJR904.b0750,iUMN146_1321.UM146_13905,iUTI89_1310.UTI89_C0747,iY75_1357.Y75_RS03905,iZ_1308.Z0919 Bacteria 1MWQU@1224,2TRPG@28211,3FDX0@34008,COG0379@1,COG0379@2 NA|NA|NA H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate HGDHCNMN_03744 388739.RSK20926_10644 7.1e-07 62.4 Roseobacter nadB GO:0008150,GO:0040007 1.3.5.4,1.4.3.16,2.4.2.19 ko:K00244,ko:K00278,ko:K00767 ko00020,ko00190,ko00250,ko00620,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00250,map00620,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map02020 M00009,M00011,M00115,M00150,M00173 R00357,R00481,R02164,R03348 RC00006,RC00045,RC02566,RC02877 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1595 Bacteria 1RBQW@1224,2P49J@2433,2TS0E@28211,COG0029@1,COG0029@2 NA|NA|NA H Fumarate reductase flavoprotein C-term HGDHCNMN_03745 76114.ebA7137 5.1e-110 404.1 Rhodocyclales pssA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.8 ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 M00093 R01800 RC00002,RC00017,RC02795 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWD9@1224,2KUY1@206389,2VIME@28216,COG1183@1,COG1183@2 NA|NA|NA I Belongs to the CDP-alcohol phosphatidyltransferase class-I family HGDHCNMN_03746 1538295.JY96_19760 4.2e-173 614.0 unclassified Burkholderiales ilvC 1.1.1.86 ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R03051,R04439,R04440,R05068,R05069,R05071 RC00726,RC00836,RC00837,RC01726 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS10005,iHN637.CLJU_RS10010,iJN746.PP_4678,iLJ478.TM0550 Bacteria 1KIUF@119065,1MV7M@1224,2VIQ5@28216,COG0059@1,COG0059@2 NA|NA|NA H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate HGDHCNMN_03747 62928.azo3155 1.9e-73 282.0 Rhodocyclales ilvH GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1906,iECNA114_1301.ECNA114_0072,iEcSMS35_1347.EcSMS35_0084,iG2583_1286.G2583_0082,iSFxv_1172.SFxv_0077,iUTI89_1310.UTI89_C0086 Bacteria 1RAGN@1224,2KV5Y@206389,2VH1H@28216,COG0440@1,COG0440@2 NA|NA|NA E Acetolactate synthase small HGDHCNMN_03748 76114.ebA7130 1.2e-286 991.9 Rhodocyclales ilvI GO:0000287,GO:0003674,GO:0003824,GO:0003984,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0019842,GO:0030976,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901681 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1907,iB21_1397.B21_00078,iBWG_1329.BWG_0073,iECBD_1354.ECBD_3539,iECB_1328.ECB_00079,iECD_1391.ECD_00079,iUTI89_1310.UTI89_C0085,iYL1228.KPN_00082 Bacteria 1MU6U@1224,2KUZP@206389,2VJ55@28216,COG0028@1,COG0028@2 NA|NA|NA H COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase HGDHCNMN_03749 1454004.AW11_00781 9.3e-62 243.0 unclassified Betaproteobacteria sigE ko:K03088 ko00000,ko03021 Bacteria 1KQRR@119066,1R9WC@1224,2VQ28@28216,COG1595@1,COG1595@2 NA|NA|NA K Sigma-70, region 4 HGDHCNMN_03750 1454004.AW11_00782 8.6e-15 86.7 Betaproteobacteria Bacteria 1N8N7@1224,2E95F@1,2VWBC@28216,333E6@2 NA|NA|NA S Protein of unknown function (DUF3619) HGDHCNMN_03752 85643.Tmz1t_2772 2.9e-49 201.4 Rhodocyclales VP2641 Bacteria 1REEC@1224,2KWXJ@206389,2VRE0@28216,COG1714@1,COG1714@2 NA|NA|NA S membrane protein domain HGDHCNMN_03753 76114.ebA7171 1.1e-128 466.5 Rhodocyclales lptG ko:K11720 ko02010,map02010 M00320 ko00000,ko00001,ko00002,ko02000 1.B.42.1 Bacteria 1MVW3@1224,2KUBZ@206389,2VHA1@28216,COG0795@1,COG0795@2 NA|NA|NA S Permease YjgP YjgQ family HGDHCNMN_03754 62928.azo2903 1.2e-123 450.7 Rhodocyclales lptF ko:K07091,ko:K11720 ko02010,map02010 M00320 ko00000,ko00001,ko00002,ko02000 1.B.42.1 Bacteria 1MUF2@1224,2KVN9@206389,2VH9C@28216,COG0795@1,COG0795@2 NA|NA|NA S Permease YjgP YjgQ family HGDHCNMN_03756 62928.azo3505 7.4e-41 172.9 Rhodocyclales ureB GO:0003674,GO:0003824,GO:0006807,GO:0008150,GO:0008152,GO:0009039,GO:0016787,GO:0016810,GO:0016811 3.5.1.5 ko:K01427,ko:K01428,ko:K01429,ko:K14048 ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120 R00131 RC02798,RC02806 ko00000,ko00001,ko01000 Bacteria 1RGW0@1224,2KWUI@206389,2VSGJ@28216,COG0832@1,COG0832@2 NA|NA|NA E Belongs to the urease beta subunit family HGDHCNMN_03757 279714.FuraDRAFT_2149 2.7e-43 181.0 Neisseriales ureA 3.5.1.5 ko:K01430,ko:K14048 ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120 R00131 RC02798,RC02806 ko00000,ko00001,ko01000 Bacteria 1RGXE@1224,2KRR6@206351,2VSES@28216,COG0831@1,COG0831@2 NA|NA|NA E Belongs to the urease gamma subunit family HGDHCNMN_03758 748247.AZKH_4588 1.3e-89 336.7 Rhodocyclales ureD ko:K03190 ko00000 Bacteria 1RABD@1224,2KVE9@206389,2VHXH@28216,COG0829@1,COG0829@2 NA|NA|NA J Required for maturation of urease via the functional incorporation of the urease nickel metallocenter HGDHCNMN_03759 62928.azo0678 6.5e-101 373.6 Rhodocyclales urtE ko:K11963 ko02010,map02010 M00323 ko00000,ko00001,ko00002,ko02000 3.A.1.4.4,3.A.1.4.5 Bacteria 1MU4Z@1224,2KV7I@206389,2VJUP@28216,COG0410@1,COG0410@2 NA|NA|NA E ABC transporter, ATP-binding protein HGDHCNMN_03760 62928.azo0677 1.3e-110 406.0 Rhodocyclales urtD ko:K11962 ko02010,map02010 M00323 ko00000,ko00001,ko00002,ko02000 3.A.1.4.4,3.A.1.4.5 Bacteria 1MUBR@1224,2KUB2@206389,2VIX4@28216,COG4674@1,COG4674@2 NA|NA|NA S Urea ABC transporter ATP-binding protein urtd HGDHCNMN_03761 331869.BAL199_24274 5.6e-31 140.2 unclassified Alphaproteobacteria urtC ko:K11960,ko:K11961 ko02010,map02010 M00323 ko00000,ko00001,ko00002,ko02000 3.A.1.4.4,3.A.1.4.5 Bacteria 1MUPI@1224,2TTN2@28211,4BPDY@82117,COG4177@1,COG4177@2 NA|NA|NA E Branched-chain amino acid transport system / permease component HGDHCNMN_03762 388467.A19Y_3835 1.1e-34 152.9 Oscillatoriales 2.4.2.26 ko:K00771 ko00532,ko00534,ko01100,map00532,map00534,map01100 M00057 R05925 ko00000,ko00001,ko00002,ko01000,ko01003 GT14 Bacteria 1G0KR@1117,1HC6A@1150,COG0463@1,COG0463@2 NA|NA|NA M Core-2/I-Branching enzyme HGDHCNMN_03763 748247.AZKH_0481 5.3e-46 190.7 Rhodocyclales yhbT GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Bacteria 1RB7T@1224,2KXAD@206389,2VTWW@28216,COG3154@1,COG3154@2 NA|NA|NA I lipid carrier protein HGDHCNMN_03764 85643.Tmz1t_0716 2.2e-117 428.7 Rhodocyclales yhbV Bacteria 1MWFW@1224,2KUYD@206389,2VISF@28216,COG0826@1,COG0826@2 NA|NA|NA O Peptidase family U32 HGDHCNMN_03765 748247.AZKH_0483 1.2e-167 595.9 Rhodocyclales yhbU ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Bacteria 1MUQG@1224,2KU9W@206389,2VH51@28216,COG0826@1,COG0826@2 NA|NA|NA O Peptidase U32 HGDHCNMN_03766 748247.AZKH_0492 1.4e-217 762.3 Rhodocyclales putP ko:K03307,ko:K14387 ko04725,ko05231,map04725,map05231 ko00000,ko00001,ko02000 2.A.21,2.A.21.8 Bacteria 1MUBI@1224,2KUVM@206389,2VHA8@28216,COG0591@1,COG0591@2 NA|NA|NA E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family HGDHCNMN_03767 1123367.C666_13865 3e-62 245.0 Rhodocyclales lonD 3.4.21.53 ko:K01338,ko:K07157 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 Bacteria 1RFYH@1224,2KWC8@206389,2VSA4@28216,COG2802@1,COG2802@2 NA|NA|NA S peptidase S16 HGDHCNMN_03768 62928.azo2970 2.2e-74 285.4 Rhodocyclales ko:K02282,ko:K07689 ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111 M00475 ko00000,ko00001,ko00002,ko02022,ko02035,ko02044 Bacteria 1QW4D@1224,2KWHM@206389,2VRAH@28216,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon HGDHCNMN_03769 207954.MED92_07561 5.6e-27 127.1 Oceanospirillales Bacteria 1MU2C@1224,1RM8A@1236,1XIJY@135619,COG5001@1,COG5001@2 NA|NA|NA T signal transduction protein containing a membrane domain, an EAL and a GGDEF domain HGDHCNMN_03770 1304883.KI912532_gene389 9.4e-101 374.4 Rhodocyclales 2.7.13.3 ko:K07636 ko02020,map02020 M00434 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1RCM9@1224,2KYM8@206389,2WGMB@28216,COG0642@1,COG2205@2,COG4191@1,COG4191@2 NA|NA|NA T Cache domain HGDHCNMN_03771 395495.Lcho_3366 0.0 1090.1 Betaproteobacteria Bacteria 1NWNJ@1224,2WHQD@28216,COG0642@1,COG0642@2,COG2202@1,COG2202@2 NA|NA|NA T Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) HGDHCNMN_03772 686340.Metal_1117 2.8e-57 228.4 Methylococcales ko:K07491 ko00000 Bacteria 1RCWW@1224,1S3ZJ@1236,1XGFF@135618,COG1943@1,COG1943@2 NA|NA|NA L Transposase IS200 like HGDHCNMN_03776 1229172.JQFA01000002_gene2112 4.1e-07 61.2 Oscillatoriales Bacteria 1GDZF@1117,1HFPR@1150,2C83S@1,33WUK@2 NA|NA|NA HGDHCNMN_03777 857087.Metme_3862 4.6e-61 242.3 Methylococcales pvdO Bacteria 1PJRR@1224,1RMDQ@1236,1XE9V@135618,COG0515@1,COG0515@2,COG1262@1,COG1262@2 NA|NA|NA KLT Tyrosine-protein kinase, subgroup, catalytic domain HGDHCNMN_03778 522306.CAP2UW1_3017 1.7e-45 189.5 Betaproteobacteria sigK GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0010468,GO:0010565,GO:0016020,GO:0019216,GO:0019217,GO:0019222,GO:0030312,GO:0031323,GO:0044464,GO:0050789,GO:0050794,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090 ko:K03088 ko00000,ko03021 Bacteria 1N00E@1224,2VQNP@28216,COG1595@1,COG1595@2 NA|NA|NA K Belongs to the sigma-70 factor family. ECF subfamily HGDHCNMN_03779 522306.CAP2UW1_3018 6.4e-39 167.9 Betaproteobacteria 4.4.1.3,5.3.1.15,5.3.3.19 ko:K09988,ko:K16953,ko:K19547 ko00040,ko00920,ko01130,map00040,map00920,map01130 M00787 R01898,R02574 RC00516,RC00747,RC00748 ko00000,ko00001,ko00002,ko01000 Bacteria 1NDV4@1224,2VYZP@28216,COG1917@1,COG1917@2 NA|NA|NA S ChrR Cupin-like domain HGDHCNMN_03780 688245.CtCNB1_1987 2.5e-66 258.5 Comamonadaceae 1.16.3.1 ko:K03594 ko00860,map00860 R00078 RC02758 ko00000,ko00001,ko01000 Bacteria 1R5K9@1224,2VQXI@28216,4AH47@80864,COG1633@1,COG1633@2 NA|NA|NA S Domain of unknown function (DUF4439) HGDHCNMN_03781 1198452.Jab_1c21110 1.8e-22 112.1 Oxalobacteraceae ctaG ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 Bacteria 1MZGS@1224,2VVQN@28216,47814@75682,COG3474@1,COG3474@2 NA|NA|NA C Cytochrome c HGDHCNMN_03782 522306.CAP2UW1_4209 4.3e-111 407.9 unclassified Betaproteobacteria hprA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.29,1.1.1.399,1.1.1.95 ko:K00018,ko:K00058 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00020,M00346 R00717,R01388,R01513 RC00031,RC00042 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1KQWS@119066,1MU2D@1224,2WGFK@28216,COG1052@1,COG1052@2 NA|NA|NA C D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HGDHCNMN_03784 546264.NEIFLAOT_02510 5.6e-25 121.7 Bacteria Bacteria 28QM7@1,2ZD2Z@2 NA|NA|NA HGDHCNMN_03785 62928.azo3214 3.2e-34 151.0 Rhodocyclales Bacteria 1N8HU@1224,2E4DA@1,2KXE5@206389,2VWNK@28216,32Z8P@2 NA|NA|NA HGDHCNMN_03787 640081.Dsui_3324 8.9e-32 142.9 Rhodocyclales yajC GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria 1MZT2@1224,2KWNW@206389,2VU6T@28216,COG1862@1,COG1862@2 NA|NA|NA U preprotein translocase subunit YajC HGDHCNMN_03788 748247.AZKH_3697 1.6e-279 968.4 Rhodocyclales secD ko:K03072 ko03060,ko03070,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 Bacteria 1MV5U@1224,2KV11@206389,2VHKD@28216,COG0342@1,COG0342@2 NA|NA|NA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA HGDHCNMN_03789 85643.Tmz1t_3410 1.4e-135 489.2 Rhodocyclales secF GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 ko:K03072,ko:K03074,ko:K12257 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 Bacteria 1MU74@1224,2KVVV@206389,2VHZG@28216,COG0341@1,COG0341@2 NA|NA|NA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA HGDHCNMN_03790 123899.JPQP01000020_gene1820 2.2e-40 171.4 Alcaligenaceae ko:K07483,ko:K07497 ko00000 Bacteria 1RIQ6@1224,2VT3W@28216,3T4JZ@506,COG2963@1,COG2963@2 NA|NA|NA L Protein of unknown function (DUF1153) HGDHCNMN_03792 1000565.METUNv1_02978 9.5e-118 430.6 Rhodocyclales ecaA 4.2.1.1 ko:K01674 ko00910,map00910 R00132,R10092 RC02807 ko00000,ko00001,ko01000 Bacteria 1PEA6@1224,2KUD9@206389,2VI5K@28216,COG3338@1,COG3338@2 NA|NA|NA P carbonic anhydrase HGDHCNMN_03793 1316936.K678_16685 2.4e-117 430.3 Rhodospirillales Bacteria 1NRP8@1224,2JPEA@204441,2TXJ2@28211,COG0642@1,COG2202@1,COG2202@2,COG2205@2,COG5002@1,COG5002@2 NA|NA|NA T PhoQ Sensor HGDHCNMN_03794 1504672.669786563 5.8e-143 513.8 Comamonadaceae yvbT GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 Bacteria 1MVF0@1224,2VHXM@28216,4ABP9@80864,COG2141@1,COG2141@2 NA|NA|NA C Luciferase family HGDHCNMN_03795 243231.GSU1528 9.2e-79 300.4 Deltaproteobacteria VPA1512 ko:K02030,ko:K10001,ko:K18691 ko02010,ko02020,map02010,map02020 M00230,M00236 ko00000,ko00001,ko00002,ko01000,ko01011,ko02000 3.A.1.3,3.A.1.3.19,3.A.1.3.4 Bacteria 1MWIK@1224,2WKZH@28221,42QMD@68525,COG0834@1,COG0834@2 NA|NA|NA ET Bacterial extracellular solute-binding proteins, family 3 HGDHCNMN_03796 62928.azo0843 4.2e-163 581.3 Rhodocyclales Bacteria 1MV6F@1224,2KVDR@206389,2VH8F@28216,COG1167@1,COG1167@2 NA|NA|NA K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs HGDHCNMN_03798 76114.ebA5327 9.1e-119 433.7 Rhodocyclales Bacteria 1R84F@1224,2KW38@206389,2VN09@28216,COG2327@1,COG2327@2 NA|NA|NA S Polysaccharide pyruvyl transferase HGDHCNMN_03799 243233.MCA2067 2.7e-78 298.5 Methylococcales sodB 1.15.1.1 ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 ko00000,ko00001,ko01000 Bacteria 1MVW2@1224,1RP7X@1236,1XDJM@135618,COG0605@1,COG0605@2 NA|NA|NA C Destroys radicals which are normally produced within the cells and which are toxic to biological systems HGDHCNMN_03800 748247.AZKH_3782 8.6e-55 220.3 Rhodocyclales ko:K09017,ko:K18301 M00642 ko00000,ko00002,ko01504,ko03000 Bacteria 1MVQV@1224,2KW36@206389,2VK6A@28216,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HGDHCNMN_03801 640081.Dsui_0409 2.3e-71 276.2 Rhodocyclales ko:K18302 M00642 ko00000,ko00002,ko01504,ko02000 2.A.6.2,8.A.1 Bacteria 1NJDF@1224,2KUJ0@206389,2VIS6@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family HGDHCNMN_03802 1123073.KB899241_gene2169 0.0 1287.7 Xanthomonadales czcA ko:K18303 M00642 ko00000,ko00002,ko01504,ko02000 2.A.6.2.17 Bacteria 1MU48@1224,1RMBN@1236,1X41A@135614,COG0841@1,COG0841@2 NA|NA|NA V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family HGDHCNMN_03803 62928.azo0848 3.4e-83 314.7 Rhodocyclales pcm 2.1.1.77 ko:K00573 ko00000,ko01000 Bacteria 1RD6S@1224,2KUMH@206389,2VJX3@28216,COG2518@1,COG2518@2 NA|NA|NA O protein-L-isoaspartate(D-aspartate) O-methyltransferase HGDHCNMN_03804 1121035.AUCH01000009_gene862 2.1e-33 148.3 Rhodocyclales pspE Bacteria 1MZPW@1224,2KWZX@206389,2VU52@28216,COG0607@1,COG0607@2 NA|NA|NA P rhodanese-related sulfurtransferase HGDHCNMN_03805 305700.B447_03068 5.4e-136 491.1 Rhodocyclales tolC ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 Bacteria 1MWCJ@1224,2KUK1@206389,2VHG1@28216,COG1538@1,COG1538@2 NA|NA|NA MU COG1538 Outer membrane protein HGDHCNMN_03806 522306.CAP2UW1_3171 3.5e-26 126.3 unclassified Betaproteobacteria Bacteria 1KR23@119066,1QEWV@1224,2W8WD@28216,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeat HGDHCNMN_03808 1123400.KB904769_gene2919 3.3e-36 159.1 Gammaproteobacteria Bacteria 1R48D@1224,1SEW7@1236,COG4625@1,COG4625@2,COG5295@1,COG5295@2 NA|NA|NA UW Hep Hag repeat protein HGDHCNMN_03809 1123487.KB892835_gene3432 1.2e-248 865.5 Rhodocyclales ubiD GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008694,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.1.1.61,4.1.1.98 ko:K03182,ko:K16239 ko00130,ko00627,ko01100,ko01110,ko01120,map00130,map00627,map01100,map01110,map01120 M00117 R01238,R04985,R04986 RC00391 ko00000,ko00001,ko00002,ko01000 iECO111_1330.ECO111_4669,iIT341.HP0396 Bacteria 1MU62@1224,2KVEB@206389,2VH09@28216,COG0043@1,COG0043@2 NA|NA|NA H Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis HGDHCNMN_03811 1121861.KB899954_gene2396 3.2e-57 228.4 Alphaproteobacteria Bacteria 1PHGZ@1224,2BIZP@1,2UUGE@28211,32D87@2 NA|NA|NA S PEP-CTERM motif HGDHCNMN_03812 1121035.AUCH01000016_gene2212 3.3e-35 156.8 Rhodocyclales aggA ko:K12543 M00330 ko00000,ko00002,ko02000,ko02044 1.B.17,3.A.1.109.4 Bacteria 1MYX2@1224,2KUPB@206389,2VKDN@28216,COG1538@1,COG1538@2,COG4319@1,COG4319@2 NA|NA|NA MU COG1538 Outer membrane protein HGDHCNMN_03813 29581.BW37_04089 3.9e-86 325.5 Oxalobacteraceae ko:K12542 M00330 ko00000,ko00002,ko02000,ko02044 3.A.1.109.4,8.A.1 Bacteria 1MUI8@1224,2VIAA@28216,4733D@75682,COG0845@1,COG0845@2 NA|NA|NA M type I secretion membrane fusion protein, HlyD HGDHCNMN_03814 29581.BW37_04088 4.2e-207 728.0 Oxalobacteraceae ko:K12541 ko02010,map02010 M00330 ko00000,ko00001,ko00002,ko02000,ko02044 3.A.1.109.3,3.A.1.109.4 Bacteria 1R2T0@1224,2VP2B@28216,472R5@75682,COG2274@1,COG2274@2 NA|NA|NA P ABC transporter transmembrane region HGDHCNMN_03816 62928.azo1614 8.3e-131 473.4 Rhodocyclales rluC GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.24 ko:K06179 ko00000,ko01000,ko03009 Bacteria 1MVDX@1224,2KUN8@206389,2VI51@28216,COG0564@1,COG0564@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil HGDHCNMN_03817 62928.azo1613 2.3e-283 981.9 Rhodocyclales rne GO:0000287,GO:0000966,GO:0000967,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008312,GO:0008995,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0017151,GO:0019222,GO:0019439,GO:0019899,GO:0022607,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034655,GO:0034660,GO:0042254,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043462,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0046872,GO:0048519,GO:0050789,GO:0050790,GO:0051095,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051336,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902280 3.1.26.12 ko:K08300 ko03018,map03018 M00394 ko00000,ko00001,ko00002,ko01000,ko03009,ko03019 Bacteria 1MV65@1224,2KV38@206389,2VIE5@28216,COG1530@1,COG1530@2 NA|NA|NA J Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs HGDHCNMN_03818 640081.Dsui_3500 2.5e-58 231.5 Rhodocyclales amiC GO:0000003,GO:0000910,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0008745,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019954,GO:0022402,GO:0022414,GO:0030288,GO:0030313,GO:0031975,GO:0032505,GO:0042597,GO:0043093,GO:0044464,GO:0051301,GO:0061783 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 iPC815.YPO1023,iSDY_1059.SDY_3034,iYL1228.KPN_03225 Bacteria 1MUQK@1224,2KV54@206389,2VHXN@28216,COG0860@1,COG0860@2 NA|NA|NA M N-acetylmuramoyl-L-alanine amidase HGDHCNMN_03819 62928.azo3328 0.0 1088.6 Rhodocyclales gspE2 ko:K02652 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1MU7V@1224,2KURM@206389,2VHQ1@28216,COG2804@1,COG2804@2 NA|NA|NA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB HGDHCNMN_03820 497321.C664_04802 3.1e-83 315.1 Rhodocyclales 3.1.26.11,3.1.4.17 ko:K00784,ko:K01120 ko00230,ko03013,map00230,map03013 R00191,R01234 RC00296 ko00000,ko00001,ko01000,ko03016 Bacteria 1QU4B@1224,2KUER@206389,2VH0D@28216,COG1234@1,COG1234@2 NA|NA|NA S cAMP phosphodiesterases class-II HGDHCNMN_03821 62928.azo3330 2.3e-74 285.4 Rhodocyclales Bacteria 1MW1M@1224,2KUV6@206389,2VJ1K@28216,COG1716@1,COG1716@2 NA|NA|NA T (FHA) domain HGDHCNMN_03822 1454004.AW11_01424 1.2e-42 180.3 Betaproteobacteria pppL 3.1.3.16 ko:K01090,ko:K20074 ko00000,ko01000,ko01009 Bacteria 1R7UF@1224,2VM6F@28216,COG0631@1,COG0631@2 NA|NA|NA T protein phosphatase 2C domain protein HGDHCNMN_03823 522373.Smlt1892 1e-13 81.6 Xanthomonadales Bacteria 1N09A@1224,1SDKG@1236,1XD01@135614,COG3617@1,COG3617@2 NA|NA|NA K prophage antirepressor HGDHCNMN_03824 78245.Xaut_2720 5e-67 260.8 Xanthobacteraceae MA20_43170 ko:K06911 ko00000 Bacteria 1QV1F@1224,2TWHJ@28211,3F2D6@335928,COG0247@1,COG0247@2 NA|NA|NA C 4Fe-4S dicluster domain HGDHCNMN_03825 76114.ebA546 7.2e-63 247.3 Rhodocyclales Bacteria 1QUZX@1224,2KWK8@206389,2VQK8@28216,COG2267@1,COG2267@2 NA|NA|NA I Thioesterase domain HGDHCNMN_03826 1266925.JHVX01000001_gene2530 1.8e-74 285.4 Betaproteobacteria dps ko:K04047 ko00000,ko03036 Bacteria 1RAC5@1224,2VM4X@28216,COG0783@1,COG0783@2 NA|NA|NA P Belongs to the Dps family HGDHCNMN_03827 29581.BW37_04323 1.5e-157 562.4 Oxalobacteraceae Bacteria 1MX6A@1224,2VH2Z@28216,4740B@75682,COG0655@1,COG0655@2 NA|NA|NA S Flavodoxin-like fold HGDHCNMN_03828 748247.AZKH_4089 7.4e-26 124.0 Rhodocyclales Bacteria 1MZFW@1224,2BYED@1,2KXNE@206389,2VXT0@28216,32USU@2 NA|NA|NA HGDHCNMN_03829 85643.Tmz1t_1160 1e-233 815.8 Rhodocyclales nadD GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18,3.6.1.55 ko:K00969,ko:K03574 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1NNZ8@1224,2KXU4@206389,2W09S@28216,COG1057@1,COG1057@2 NA|NA|NA H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) HGDHCNMN_03830 159087.Daro_1474 5e-50 203.8 Rhodocyclales Bacteria 1RIKC@1224,2KWKF@206389,2VSNY@28216,COG1433@1,COG1433@2 NA|NA|NA S Dinitrogenase iron-molybdenum cofactor HGDHCNMN_03831 159087.Daro_1475 5.4e-97 360.9 Rhodocyclales modD 2.4.2.19 ko:K00767,ko:K03813 ko00760,ko01100,map00760,map01100 M00115 R03348 RC02877 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW0C@1224,2KW59@206389,2VNEV@28216,COG0157@1,COG0157@2 NA|NA|NA H Quinolinate phosphoribosyl transferase, C-terminal domain HGDHCNMN_03832 1121035.AUCH01000005_gene31 1.2e-27 129.4 Rhodocyclales Bacteria 1N0Y2@1224,2DZDN@1,2KXCV@206389,2VX1Y@28216,32V7Z@2 NA|NA|NA HGDHCNMN_03833 159087.Daro_1482 5.7e-33 146.7 Rhodocyclales Bacteria 1Q1CG@1224,2ENZ5@1,2KZNN@206389,2W6HI@28216,3190R@2 NA|NA|NA HGDHCNMN_03834 159087.Daro_1483 2.3e-69 268.5 Rhodocyclales nifF ko:K03839 ko00000 Bacteria 1MX7F@1224,2KWPE@206389,2VS8P@28216,COG0716@1,COG0716@2 NA|NA|NA C Low-potential electron donor to a number of redox enzymes HGDHCNMN_03835 159087.Daro_1484 1.2e-31 142.1 Rhodocyclales ko:K02597 ko00000 Bacteria 1N4U9@1224,2E0R6@1,2KXEA@206389,2VXDJ@28216,32W9H@2 NA|NA|NA S NifZ domain HGDHCNMN_03836 159087.Daro_1485 3.5e-52 210.7 Rhodocyclales fdx4 Bacteria 1N0XK@1224,2KX48@206389,2VUIX@28216,COG3411@1,COG3411@2 NA|NA|NA C Ferredoxin HGDHCNMN_03837 159087.Daro_1487 3.6e-85 321.6 Rhodocyclales nifA ko:K02584 ko02020,map02020 ko00000,ko00001,ko03000 Bacteria 1QTT3@1224,2KU7Y@206389,2VKXT@28216,COG3604@1,COG3604@2 NA|NA|NA KT Domain present in phytochromes and cGMP-specific phosphodiesterases. HGDHCNMN_03838 1220535.IMCC14465_04120 2.5e-27 127.5 unclassified Alphaproteobacteria mraY GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 iAF987.Gmet_0409,iEC042_1314.EC042_0088,iECABU_c1320.ECABU_c00920,iECED1_1282.ECED1_0088,iECH74115_1262.ECH74115_0095,iECSP_1301.ECSP_0090,iECs_1301.ECs0091,iG2583_1286.G2583_0091,iSDY_1059.SDY_0117,iZ_1308.Z0097,ic_1306.c0105 Bacteria 1MUTK@1224,2TRUG@28211,4BP7F@82117,COG0472@1,COG0472@2 NA|NA|NA M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan HGDHCNMN_03839 1454004.AW11_03506 2.2e-87 330.1 Betaproteobacteria 2.3.1.20 ko:K00635 ko00561,ko01100,map00561,map01100 M00089 R02251 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 Bacteria 1N7HY@1224,2VIJ1@28216,COG1020@1,COG1020@2 NA|NA|NA Q Protein of unknown function (DUF1298) HGDHCNMN_03840 76114.ebA6658 6.9e-166 590.5 Rhodocyclales oppC ko:K02034,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1MU26@1224,2KUAK@206389,2VHWM@28216,COG1173@1,COG1173@2 NA|NA|NA P COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components HGDHCNMN_03841 76114.ebA6661 5.5e-146 523.9 Rhodocyclales oppB ko:K02033 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 1MU8Z@1224,2KUKA@206389,2WEDQ@28216,COG0601@1,COG0601@2 NA|NA|NA P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components HGDHCNMN_03842 159087.Daro_0260 5.7e-115 420.6 Rhodocyclales hflC Bacteria 1MUM8@1224,2KVKQ@206389,2VHBD@28216,COG0330@1,COG0330@2 NA|NA|NA O prohibitin homologues HGDHCNMN_03843 1304883.KI912532_gene529 6.6e-46 190.3 Rhodocyclales ko:K07340 ko00000 Bacteria 1N4FG@1224,2KWSR@206389,2VTGB@28216,COG1585@1,COG1585@2 NA|NA|NA OU NfeD-like C-terminal, partner-binding HGDHCNMN_03844 748247.AZKH_4461 7.8e-45 186.8 Betaproteobacteria cccE Bacteria 1N0EF@1224,2VT6G@28216,COG2010@1,COG2010@2 NA|NA|NA C Cytochrome c mono- and diheme variants HGDHCNMN_03845 1232683.ADIMK_0185 5.9e-146 524.2 Gammaproteobacteria 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 Bacteria 1PP8V@1224,1RYJ4@1236,COG2203@1,COG2203@2 NA|NA|NA T Domain present in phytochromes and cGMP-specific phosphodiesterases. HGDHCNMN_03846 62928.azo1537 8.7e-31 140.2 Rhodocyclales pdxH ko:K07006 ko00000 Bacteria 1N8Z5@1224,2KX6P@206389,2VVVW@28216,COG3576@1,COG3576@2 NA|NA|NA S pyridoxamine 5-phosphate HGDHCNMN_03847 76114.ebA5830 0.0 1396.3 Rhodocyclales ppsA GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008986,GO:0009058,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019318,GO:0019319,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:1901576 2.7.9.2 ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 M00173,M00374 R00199 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 iEcE24377_1341.EcE24377A_1919,iYL1228.KPN_02160 Bacteria 1MU0R@1224,2KU6V@206389,2VHQ3@28216,COG0574@1,COG0574@2,COG1080@1,COG1080@2 NA|NA|NA H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate HGDHCNMN_03848 85643.Tmz1t_0253 5.9e-51 207.6 Rhodocyclales int ko:K03733,ko:K14059 ko00000,ko03036 Bacteria 1MVZB@1224,2KWR3@206389,2VN1J@28216,COG0582@1,COG0582@2 NA|NA|NA L Pfam:DUF3596 HGDHCNMN_03849 497321.C664_13132 4.1e-31 140.2 Rhodocyclales Bacteria 1N850@1224,2E35B@1,2KZ7Y@206389,2VURY@28216,32Y5A@2 NA|NA|NA HGDHCNMN_03850 85643.Tmz1t_0251 1.2e-24 118.6 Rhodocyclales ko:K07727 ko00000,ko03000 Bacteria 1PWHW@1224,2KZK3@206389,2WC2F@28216,COG3655@1,COG3655@2 NA|NA|NA K Cro/C1-type HTH DNA-binding domain HGDHCNMN_03852 62928.azo0187 1.8e-35 155.6 Rhodocyclales Bacteria 1MZBZ@1224,2KWMI@206389,2VMBB@28216,COG3245@1,COG3245@2 NA|NA|NA C cytochrome c5 HGDHCNMN_03853 305700.B447_19179 9.4e-33 146.0 Rhodocyclales zapA GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000921,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0030428,GO:0031106,GO:0032153,GO:0032185,GO:0032505,GO:0032506,GO:0034622,GO:0042802,GO:0043093,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051301,GO:0061640,GO:0065003,GO:0070925,GO:0071840,GO:0090529,GO:1902410,GO:1903047 ko:K09888 ko00000,ko03036 Bacteria 1N6YN@1224,2KX9P@206389,2VVSV@28216,COG3027@1,COG3027@2 NA|NA|NA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division HGDHCNMN_03855 76114.ebA3690 3.9e-223 780.8 Rhodocyclales cobQ 6.3.5.10 ko:K02232 ko00860,ko01100,map00860,map01100 M00122 R05225 RC00010,RC01302 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUFY@1224,2KUUT@206389,2VII5@28216,COG1492@1,COG1492@2 NA|NA|NA H Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation HGDHCNMN_03856 305700.B447_11562 7.4e-108 397.1 Rhodocyclales cobD GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 6.3.1.10 ko:K02227 ko00860,ko01100,map00860,map01100 M00122 R06529,R07302 RC00090,RC00096 ko00000,ko00001,ko00002,ko01000 Bacteria 1MURM@1224,2KUAV@206389,2VIDF@28216,COG1270@1,COG1270@2 NA|NA|NA H Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group HGDHCNMN_03857 62928.azo3519 3e-107 395.2 Rhodocyclales cobC 2.6.1.9,4.1.1.81 ko:K00817,ko:K02225,ko:K04720 ko00340,ko00350,ko00360,ko00400,ko00401,ko00860,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00860,map00960,map01100,map01110,map01130,map01230 M00026,M00122 R00694,R00734,R03243,R06529,R06530,R07302 RC00006,RC00090,RC00096,RC00517,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MXDP@1224,2KU6R@206389,2VKTS@28216,COG0079@1,COG0079@2 NA|NA|NA E COG0079 Histidinol-phosphate aromatic aminotransferase and cobyric acid decarboxylase HGDHCNMN_03858 497321.C664_14983 1.4e-108 399.4 Rhodocyclales btuF GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0008144,GO:0008150,GO:0015889,GO:0015893,GO:0019842,GO:0030288,GO:0030313,GO:0031419,GO:0031975,GO:0036094,GO:0042221,GO:0042493,GO:0042597,GO:0044464,GO:0046906,GO:0048037,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0097159,GO:1901363 ko:K02016,ko:K06858 ko02010,map02010 M00240,M00241 ko00000,ko00001,ko00002,ko02000 3.A.1.13,3.A.1.14 iECH74115_1262.ECH74115_0168,iECSP_1301.ECSP_0159,iECs_1301.ECs0162,iZ_1308.Z0169 Bacteria 1MWVF@1224,2KU8W@206389,2VJ7T@28216,COG0614@1,COG0614@2 NA|NA|NA P ABC-type Fe3 -hydroxamate transport system, periplasmic component HGDHCNMN_03860 1000565.METUNv1_03349 6.8e-94 350.5 Rhodocyclales btuF ko:K02016 ko02010,map02010 M00240 ko00000,ko00001,ko00002,ko02000 3.A.1.14 Bacteria 1PKNF@1224,2KVRK@206389,2VMK5@28216,COG0614@1,COG0614@2 NA|NA|NA P Periplasmic binding protein HGDHCNMN_03861 1123367.C666_16330 1.1e-66 259.6 Rhodocyclales Bacteria 1RB4F@1224,2KW6X@206389,2VQPA@28216,COG0500@1,COG2226@2 NA|NA|NA Q Methyltransferase domain HGDHCNMN_03862 1094497.BVwin_09430 1.1e-13 83.6 Bartonellaceae Bacteria 1PXFS@1224,2AG98@1,2V5EF@28211,316ER@2,48UI3@772 NA|NA|NA HGDHCNMN_03863 1026882.MAMP_00477 1.8e-103 383.6 Thiotrichales ko:K15125 ko05133,map05133 ko00000,ko00001,ko00536 Bacteria 1MX2K@1224,1RNRK@1236,46255@72273,COG3210@1,COG3210@2 NA|NA|NA U haemagglutination activity domain HGDHCNMN_03864 267608.RSp1075 1.2e-170 606.7 Burkholderiaceae fhaC ko:K07326 ko05133,map05133 ko00000,ko00001 Bacteria 1K6SA@119060,1MXF6@1224,2VJHW@28216,COG2831@1,COG2831@2 NA|NA|NA U activation secretion protein HGDHCNMN_03867 748247.AZKH_0119 4.6e-57 227.3 Rhodocyclales atpC GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iHN637.CLJU_RS01195 Bacteria 1RHE4@1224,2KWEP@206389,2VR2R@28216,COG0355@1,COG0355@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane HGDHCNMN_03868 748247.AZKH_0118 2.5e-237 827.8 Rhodocyclales atpD GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 e_coli_core.b3732,iAF1260.b3732,iAPECO1_1312.APECO1_2729,iB21_1397.B21_03560,iBWG_1329.BWG_3423,iE2348C_1286.E2348C_4042,iEC042_1314.EC042_4119,iEC55989_1330.EC55989_4207,iECABU_c1320.ECABU_c42160,iECBD_1354.ECBD_4300,iECB_1328.ECB_03616,iECDH10B_1368.ECDH10B_3919,iECDH1ME8569_1439.ECDH1ME8569_3620,iECD_1391.ECD_03616,iECED1_1282.ECED1_4422,iECH74115_1262.ECH74115_5168,iECIAI1_1343.ECIAI1_3916,iECIAI39_1322.ECIAI39_4336,iECNA114_1301.ECNA114_3881,iECO103_1326.ECO103_4426,iECO111_1330.ECO111_4566,iECO26_1355.ECO26_4846,iECOK1_1307.ECOK1_4181,iECP_1309.ECP_3931,iECS88_1305.ECS88_4154,iECSE_1348.ECSE_4022,iECSF_1327.ECSF_3580,iECSP_1301.ECSP_4782,iECUMN_1333.ECUMN_4262,iECW_1372.ECW_m4035,iECs_1301.ECs4674,iEKO11_1354.EKO11_4613,iETEC_1333.ETEC_4023,iEcDH1_1363.EcDH1_4235,iEcE24377_1341.EcE24377A_4247,iEcSMS35_1347.EcSMS35_4100,iEcolC_1368.EcolC_4262,iG2583_1286.G2583_4528,iJO1366.b3732,iJR904.b3732,iLF82_1304.LF82_0194,iNRG857_1313.NRG857_18585,iPC815.YPO4121,iSFV_1184.SFV_3758,iSF_1195.SF3812,iSFxv_1172.SFxv_4154,iSSON_1240.SSON_3887,iS_1188.S3956,iSbBS512_1146.SbBS512_E4189,iUMN146_1321.UM146_18850,iUMNK88_1353.UMNK88_4544,iUTI89_1310.UTI89_C4285,iWFL_1372.ECW_m4035,iY75_1357.Y75_RS18410,iZ_1308.Z5230,ic_1306.c4658 Bacteria 1MUFU@1224,2KUDB@206389,2VHDZ@28216,COG0055@1,COG0055@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits HGDHCNMN_03869 62928.azo0158 7.1e-137 493.4 Rhodocyclales atpG GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016469,GO:0030312,GO:0032991,GO:0040007,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iLJ478.TM1611 Bacteria 1MU28@1224,2KU85@206389,2VJBW@28216,COG0224@1,COG0224@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex HGDHCNMN_03870 1123487.KB892857_gene2498 2.1e-256 891.3 Rhodocyclales atpA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 iIT341.HP1134,iSB619.SA_RS10975,iSbBS512_1146.SbBS512_E4187 Bacteria 1MUG7@1224,2KV0S@206389,2VHQU@28216,COG0056@1,COG0056@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit HGDHCNMN_03871 748247.AZKH_0115 3.3e-68 264.6 Rhodocyclales atpH GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iSF_1195.SF3815,iSFxv_1172.SFxv_4157,iS_1188.S3953 Bacteria 1MVRH@1224,2KWKN@206389,2VSJV@28216,COG0712@1,COG0712@2 NA|NA|NA C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation HGDHCNMN_03872 305700.B447_05900 8.2e-55 219.9 Rhodocyclales atpF GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031225,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 e_coli_core.b3736,iAF1260.b3736,iB21_1397.B21_03564,iBWG_1329.BWG_3427,iE2348C_1286.E2348C_4046,iEC042_1314.EC042_4123,iEC55989_1330.EC55989_4211,iECABU_c1320.ECABU_c42210,iECBD_1354.ECBD_4296,iECB_1328.ECB_03620,iECDH10B_1368.ECDH10B_3923,iECDH1ME8569_1439.ECDH1ME8569_3624,iECD_1391.ECD_03620,iECED1_1282.ECED1_4426,iECH74115_1262.ECH74115_5172,iECIAI1_1343.ECIAI1_3920,iECIAI39_1322.ECIAI39_4340,iECO103_1326.ECO103_4422,iECO111_1330.ECO111_4570,iECO26_1355.ECO26_4842,iECOK1_1307.ECOK1_4185,iECP_1309.ECP_3935,iECS88_1305.ECS88_4158,iECSE_1348.ECSE_4026,iECSF_1327.ECSF_3584,iECSP_1301.ECSP_4786,iECUMN_1333.ECUMN_4266,iECW_1372.ECW_m4039,iECs_1301.ECs4678,iEKO11_1354.EKO11_4609,iETEC_1333.ETEC_4027,iEcDH1_1363.EcDH1_4231,iEcE24377_1341.EcE24377A_4252,iEcHS_1320.EcHS_A3952,iEcSMS35_1347.EcSMS35_4104,iEcolC_1368.EcolC_4258,iG2583_1286.G2583_4532,iJO1366.b3736,iJR904.b3736,iSDY_1059.SDY_4012,iSFV_1184.SFV_3762,iSF_1195.SF3816,iSFxv_1172.SFxv_4159,iSSON_1240.SSON_3883,iS_1188.S3952,iSbBS512_1146.SbBS512_E4185,iUMN146_1321.UM146_18870,iUMNK88_1353.UMNK88_4548,iUTI89_1310.UTI89_C4291,iWFL_1372.ECW_m4039,iY75_1357.Y75_RS18390,iZ_1308.Z5234,ic_1306.c4664 Bacteria 1RHZ0@1224,2KWEK@206389,2VRMS@28216,COG0711@1,COG0711@2 NA|NA|NA C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) HGDHCNMN_03873 1304883.KI912532_gene929 3.9e-32 143.7 Rhodocyclales atpE GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 Bacteria 1N1NA@1224,2KX3X@206389,2VTY0@28216,32S3K@2,COG0636@1 NA|NA|NA C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation HGDHCNMN_03874 76114.ebA2999 2.4e-137 495.0 Rhodocyclales atpB GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko03110 3.A.2.1 iAPECO1_1312.APECO1_2725,iE2348C_1286.E2348C_4048,iEC042_1314.EC042_4125,iECABU_c1320.ECABU_c42230,iECED1_1282.ECED1_4428,iECIAI39_1322.ECIAI39_4342,iECNA114_1301.ECNA114_3887,iECOK1_1307.ECOK1_4187,iECP_1309.ECP_3937,iECS88_1305.ECS88_4160,iECSF_1327.ECSF_3586,iECUMN_1333.ECUMN_4268,iEcSMS35_1347.EcSMS35_4106,iLF82_1304.LF82_0192,iNRG857_1313.NRG857_18615,iUMN146_1321.UM146_18880,iUMNK88_1353.UMNK88_4550,iUTI89_1310.UTI89_C4293,ic_1306.c4666 Bacteria 1MV87@1224,2KVA0@206389,2VHR5@28216,COG0356@1,COG0356@2 NA|NA|NA C it plays a direct role in the translocation of protons across the membrane HGDHCNMN_03875 1214065.BAGV01000102_gene2202 6.4e-35 153.3 Proteobacteria ko:K03892 ko00000,ko03000 Bacteria 1MZPS@1224,COG0640@1,COG0640@2 NA|NA|NA K Transcriptional regulator HGDHCNMN_03876 748247.AZKH_0278 8.6e-248 862.8 Rhodocyclales aas GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0008779,GO:0008922,GO:0009058,GO:0009987,GO:0015645,GO:0016020,GO:0016021,GO:0016740,GO:0016746,GO:0016747,GO:0016874,GO:0016877,GO:0016878,GO:0019637,GO:0019752,GO:0031224,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044425,GO:0044464,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.3.1.40,6.2.1.20 ko:K05939 ko00071,ko00564,map00071,map00564 R01406,R04864 RC00014,RC00039,RC00041 ko00000,ko00001,ko01000 iEC042_1314.EC042_3034 Bacteria 1MWDY@1224,2KUKS@206389,2VK7T@28216,COG0204@1,COG0204@2,COG0318@1,COG0318@2 NA|NA|NA IQ Phosphate acyltransferases HGDHCNMN_03877 582744.Msip34_2224 5.9e-57 227.3 Nitrosomonadales yaeQ Bacteria 1RDR9@1224,2KMPN@206350,2VR81@28216,COG4681@1,COG4681@2 NA|NA|NA S YaeQ HGDHCNMN_03879 305700.B447_17331 3e-88 331.3 Rhodocyclales efp GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02356 ko00000,ko03012 Bacteria 1MW2J@1224,2KVAS@206389,2VH4A@28216,COG0231@1,COG0231@2 NA|NA|NA J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase HGDHCNMN_03880 748247.AZKH_0036 4.6e-117 427.9 Rhodocyclales Bacteria 1MYVF@1224,2KU6H@206389,2VHIB@28216,COG4394@1,COG4394@2 NA|NA|NA S protein conserved in bacteria HGDHCNMN_03882 1348657.M622_05590 2.6e-45 188.3 Rhodocyclales Bacteria 1RKP2@1224,2ADKK@1,2KWK9@206389,2VSDK@28216,313B9@2 NA|NA|NA S Domain of unknown function (DUF1857) HGDHCNMN_03883 1123392.AQWL01000006_gene742 4.4e-155 554.3 Betaproteobacteria spt 2.6.1.44,2.6.1.45,2.6.1.51 ko:K00830 ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146 M00346,M00532 R00369,R00372,R00585,R00588 RC00006,RC00008,RC00018 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MWHJ@1224,2VNWB@28216,COG0075@1,COG0075@2 NA|NA|NA E PFAM aminotransferase class V HGDHCNMN_03886 644107.SL1157_2211 7e-144 516.9 Ruegeria afuA1 ko:K02012 ko02010,map02010 M00190 ko00000,ko00001,ko00002,ko02000 3.A.1.10 Bacteria 1MXZ8@1224,2TT9W@28211,4NCQ4@97050,COG1840@1,COG1840@2 NA|NA|NA P Bacterial extracellular solute-binding protein HGDHCNMN_03887 1458427.BAWN01000005_gene294 5.1e-29 134.4 Betaproteobacteria ko:K06995 ko00000 Bacteria 1N0F7@1224,2VU3R@28216,COG3450@1,COG3450@2 NA|NA|NA S enzyme of the cupin superfamily HGDHCNMN_03888 614083.AWQR01000035_gene3638 4.9e-100 372.5 Comamonadaceae Bacteria 1MU9B@1224,2VITJ@28216,4AA3T@80864,COG0840@1,COG0840@2 NA|NA|NA NT chemotaxis HGDHCNMN_03889 1348657.M622_14845 1.5e-66 259.6 Rhodocyclales rnfB GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0055114 1.12.98.1 ko:K00441,ko:K03616 ko00680,ko01100,ko01120,map00680,map01100,map01120 R03025 RC02628 ko00000,ko00001,ko01000 Bacteria 1MUWU@1224,2KVNK@206389,2VN5I@28216,COG2878@1,COG2878@2 NA|NA|NA C Part of a membrane complex involved in electron transport HGDHCNMN_03890 305700.B447_19609 3.5e-87 327.8 Rhodocyclales rnfA GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0044464,GO:0055114,GO:0071944 ko:K03617 ko00000 Bacteria 1MU8X@1224,2KUIH@206389,2VH0C@28216,COG4657@1,COG4657@2 NA|NA|NA C Part of a membrane complex involved in electron transport HGDHCNMN_03891 748247.AZKH_1804 1.8e-152 545.4 Rhodocyclales pyrD GO:0000166,GO:0003674,GO:0003824,GO:0004152,GO:0004158,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0010181,GO:0016020,GO:0016491,GO:0016627,GO:0016634,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0032553,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 ko:K00254,ko:K02823,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01868,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 iEC042_1314.EC042_1029,iECIAI39_1322.ECIAI39_2202,iECUMN_1333.ECUMN_1134,iEcSMS35_1347.EcSMS35_2174,iPC815.YPO1415,iYL1228.KPN_00974 Bacteria 1MU7C@1224,2KVCI@206389,2VJ6H@28216,COG0167@1,COG0167@2 NA|NA|NA F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor HGDHCNMN_03892 1071679.BG57_29500 7.8e-13 80.5 Burkholderiaceae Bacteria 1K46G@119060,1PA4R@1224,2E193@1,2VVMZ@28216,32WPE@2 NA|NA|NA HGDHCNMN_03893 62928.azo2209 1.4e-106 392.5 Rhodocyclales ate GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 ko:K21420 R11547,R11548 RC00064 ko00000,ko01000 Bacteria 1MW62@1224,2KVBA@206389,2VJ8E@28216,COG2935@1,COG2935@2 NA|NA|NA O May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate HGDHCNMN_03894 62928.azo2208 2.4e-87 328.6 Rhodocyclales aat GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.3.2.6 ko:K00684 R03813,R11443,R11444 RC00055,RC00064 ko00000,ko01000 Bacteria 1R9W8@1224,2KV37@206389,2VIUV@28216,COG2360@1,COG2360@2 NA|NA|NA O Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine HGDHCNMN_03895 640081.Dsui_2927 8.7e-45 186.8 Rhodocyclales yafL GO:0000270,GO:0003674,GO:0003824,GO:0004175,GO:0006022,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009254,GO:0016787,GO:0019538,GO:0030203,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901564 ko:K19303 ko00000,ko01000,ko01002,ko01011 Bacteria 1N0EE@1224,2KWNA@206389,2VSHN@28216,COG0791@1,COG0791@2 NA|NA|NA M NLP P60 protein HGDHCNMN_03896 748247.AZKH_2402 6.6e-92 344.0 Rhodocyclales serB GO:0000287,GO:0001505,GO:0003674,GO:0003824,GO:0004647,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006563,GO:0006564,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0019752,GO:0042133,GO:0042136,GO:0042578,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046872,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.3 ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R00582 RC00017 ko00000,ko00001,ko00002,ko01000,ko01009 iE2348C_1286.E2348C_4686,iEC042_1314.EC042_4885,iECO26_1355.ECO26_5594,iECSF_1327.ECSF_4321,iECUMN_1333.ECUMN_5012,iETEC_1333.ETEC_4743,iPC815.YPO0442,iUMNK88_1353.UMNK88_5307 Bacteria 1MWA3@1224,2KUQT@206389,2VKZJ@28216,COG0560@1,COG0560@2 NA|NA|NA E phosphoserine phosphatase HGDHCNMN_03897 85643.Tmz1t_2239 2.5e-168 598.2 Rhodocyclales aroF GO:0003674,GO:0003824,GO:0003849,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.54 ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 M00022 R01826 RC00435 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2375,iAPECO1_1312.APECO1_3932,iECOK1_1307.ECOK1_2946,iECS88_1305.ECS88_2787,iUMN146_1321.UM146_03705,iUTI89_1310.UTI89_C2934 Bacteria 1MU5Q@1224,2KV84@206389,2VK57@28216,COG0722@1,COG0722@2 NA|NA|NA E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) HGDHCNMN_03898 76114.ebA1070 5e-79 300.8 Rhodocyclales ssm ko:K07025 ko00000 Bacteria 1PHPQ@1224,2KZW7@206389,2VNRS@28216,COG1011@1,COG1011@2 NA|NA|NA S HAD-hyrolase-like HGDHCNMN_03899 748247.AZKH_0993 1.4e-100 372.9 Rhodocyclales bioC 2.1.1.197 ko:K02169 ko00780,ko01100,map00780,map01100 M00572 R09543 RC00003,RC00460 ko00000,ko00001,ko00002,ko01000 Bacteria 1PA5F@1224,2KUJH@206389,2VJP9@28216,COG0500@1,COG2226@2 NA|NA|NA H Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway HGDHCNMN_03900 62928.azo2817 7.8e-148 530.0 Rhodocyclales bioB GO:0003674,GO:0003824,GO:0004076,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0017144,GO:0018130,GO:0019752,GO:0030312,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0070283,GO:0071704,GO:0071944,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.6 ko:K01012 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R01078 RC00441 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1589,iZ_1308.Z0994 Bacteria 1MVFF@1224,2KUW8@206389,2VHZZ@28216,COG0502@1,COG0502@2 NA|NA|NA H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism HGDHCNMN_03901 748247.AZKH_0995 2.1e-56 225.7 Rhodocyclales comF GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 Bacteria 1RHAV@1224,2KWAY@206389,2VSPK@28216,COG1040@1,COG1040@2 NA|NA|NA S Phosphoribosyl transferase domain HGDHCNMN_03902 1123354.AUDR01000014_gene968 7.3e-56 223.4 Hydrogenophilales trmL GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.207 ko:K03216 ko00000,ko01000,ko03016 Bacteria 1KSH2@119069,1RCY4@1224,2VR5W@28216,COG0219@1,COG0219@2 NA|NA|NA J Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide HGDHCNMN_03903 62928.azo2814 3.6e-121 441.4 Rhodocyclales gpsA 1.1.1.94 ko:K00057 ko00564,ko01110,map00564,map01110 R00842,R00844 RC00029 ko00000,ko00001,ko01000 Bacteria 1MUU3@1224,2KUAI@206389,2VJ91@28216,COG0240@1,COG0240@2 NA|NA|NA I Glycerol-3-phosphate dehydrogenase HGDHCNMN_03904 62928.azo2813 4.5e-42 177.6 Rhodocyclales MA20_24010 3.2.1.96,3.4.17.14,3.5.1.28,6.1.1.12 ko:K01227,ko:K01447,ko:K01448,ko:K01876,ko:K06385,ko:K07260,ko:K11060,ko:K11062 ko00511,ko00550,ko00970,ko01100,ko01502,ko01503,ko02020,map00511,map00550,map00970,map01100,map01502,map01503,map02020 M00359,M00360,M00651,M00727 R04112,R05577 RC00055,RC00064,RC00141,RC00523 ko00000,ko00001,ko00002,ko01000,ko01002,ko01007,ko01011,ko01504,ko02042,ko03016,ko03029,ko03036 Bacteria 1MZIA@1224,2KWXG@206389,2VUTD@28216,COG3807@1,COG3807@2 NA|NA|NA S Bacterial SH3 domain HGDHCNMN_03905 1123367.C666_02065 3e-62 244.6 Rhodocyclales secB GO:0002790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0043952,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051082,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0072321 ko:K03071 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044,ko03110 3.A.5 Bacteria 1RI75@1224,2KW5X@206389,2VQ1Q@28216,COG1952@1,COG1952@2 NA|NA|NA U One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA HGDHCNMN_03906 497321.C664_14958 7.2e-32 142.9 Rhodocyclales grxC ko:K03676 ko00000,ko03110 Bacteria 1N72P@1224,2KWWG@206389,2VU2J@28216,COG0695@1,COG0695@2 NA|NA|NA O Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins HGDHCNMN_03907 62928.azo2810 7.1e-39 166.8 Rhodocyclales yibN GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.8.1.1,2.8.1.2 ko:K01011,ko:K02439 ko00270,ko00920,ko01100,ko01110,ko01120,ko04122,map00270,map00920,map01100,map01110,map01120,map04122 R01931,R03105,R03106 RC00214 ko00000,ko00001,ko01000 Bacteria 1MZ83@1224,2KWVI@206389,2VU3D@28216,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese Homology Domain HGDHCNMN_03908 497321.C664_14968 1.3e-39 169.1 Rhodocyclales bigR ko:K03892,ko:K07721,ko:K22042,ko:K22491 ko00000,ko03000 Bacteria 1N72Q@1224,2KWQT@206389,2VU9V@28216,COG0640@1,COG0640@2 NA|NA|NA K transcriptional HGDHCNMN_03909 62928.azo2806 2e-197 695.3 Rhodocyclales ctpA 3.4.21.102 ko:K03797 ko00000,ko01000,ko01002 Bacteria 1MU39@1224,2KUHV@206389,2VJ86@28216,COG0793@1,COG0793@2 NA|NA|NA M Belongs to the peptidase S41A family HGDHCNMN_03910 76114.ebA1048 5.3e-43 180.6 Rhodocyclales Bacteria 1RI4Y@1224,2BG6F@1,2KWET@206389,2VT9E@28216,32A39@2 NA|NA|NA HGDHCNMN_03911 62928.azo2804 3e-112 411.4 Rhodocyclales moeB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0061605,GO:0070566,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.73,2.7.7.80 ko:K03148,ko:K21029 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07459 RC00043 ko00000,ko00001,ko01000 iECIAI1_1343.ECIAI1_0865,iECW_1372.ECW_m0884,iEKO11_1354.EKO11_3059,iETEC_1333.ETEC_0893,iEcE24377_1341.EcE24377A_0897,iEcSMS35_1347.EcSMS35_0851,iWFL_1372.ECW_m0884 Bacteria 1MW7H@1224,2KUF5@206389,2VI1U@28216,COG0476@1,COG0476@2 NA|NA|NA H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 HGDHCNMN_03912 522306.CAP2UW1_3710 4e-112 411.4 unclassified Betaproteobacteria Bacteria 1KQPZ@119066,1MW5G@1224,2VJE7@28216,COG3000@1,COG3000@2 NA|NA|NA I Fatty acid hydroxylase superfamily HGDHCNMN_03913 522306.CAP2UW1_3709 2.5e-98 365.2 unclassified Betaproteobacteria MA20_25165 3.5.1.104 ko:K22278 ko00000,ko01000 Bacteria 1KQP6@119066,1MX3V@1224,2VJVH@28216,COG0726@1,COG0726@2 NA|NA|NA G Polysaccharide deacetylase HGDHCNMN_03914 522306.CAP2UW1_3708 8.2e-78 297.4 unclassified Betaproteobacteria Bacteria 1KQA7@119066,1P862@1224,2VKXA@28216,COG3391@1,COG3391@2 NA|NA|NA S Lactonase, 7-bladed beta-propeller HGDHCNMN_03915 159087.Daro_0605 7.7e-149 533.5 Rhodocyclales ribD GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006725,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008703,GO:0008835,GO:0009058,GO:0009110,GO:0009231,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016614,GO:0016616,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0034641,GO:0036094,GO:0042364,GO:0042726,GO:0042727,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.193,3.5.4.26 ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 M00125 R03458,R03459 RC00204,RC00933 ko00000,ko00001,ko00002,ko01000 iB21_1397.B21_00366,iECBD_1354.ECBD_3247,iECB_1328.ECB_00362,iECD_1391.ECD_00362,iECED1_1282.ECED1_0437,iECNA114_1301.ECNA114_0391,iECSF_1327.ECSF_0374,iEcolC_1368.EcolC_3219,iJN746.PP_0514,iLF82_1304.LF82_1880,iNRG857_1313.NRG857_01945,iYL1228.KPN_00366,ic_1306.c0524 Bacteria 1MUWT@1224,2KUY4@206389,2VI9P@28216,COG0117@1,COG0117@2,COG1985@1,COG1985@2 NA|NA|NA H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate HGDHCNMN_03916 62928.azo2802 8.3e-63 246.5 Rhodocyclales nrdR GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K07738 ko00000,ko03000 Bacteria 1RE7V@1224,2KWBU@206389,2VR9P@28216,COG1327@1,COG1327@2 NA|NA|NA K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes HGDHCNMN_03917 1304883.KI912532_gene1405 1.1e-215 755.7 Rhodocyclales glyA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 iIT341.HP0183 Bacteria 1MUIS@1224,2KUDA@206389,2VJ4F@28216,COG0112@1,COG0112@2 NA|NA|NA E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism HGDHCNMN_03918 1000565.METUNv1_02006 2.2e-128 466.5 Rhodocyclales Bacteria 1MU9B@1224,2KUJZ@206389,2VGZ8@28216,COG0840@1,COG0840@2 NA|NA|NA T Cache 3/Cache 2 fusion domain HGDHCNMN_03919 748247.AZKH_1010 7.4e-75 287.0 Rhodocyclales gpmB 3.1.3.73,5.4.2.12 ko:K02226,ko:K15634 ko00010,ko00260,ko00680,ko00860,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map00860,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00122 R01518,R04594,R11173 RC00017,RC00536 ko00000,ko00001,ko00002,ko01000 Bacteria 1NPC4@1224,2KWHE@206389,2VQTE@28216,COG0406@1,COG0406@2 NA|NA|NA G Belongs to the phosphoglycerate mutase family HGDHCNMN_03920 522306.CAP2UW1_0554 5.1e-70 270.8 unclassified Betaproteobacteria Bacteria 1KQRF@119066,1RHBW@1224,2VRCB@28216,COG4665@1,COG4665@2 NA|NA|NA Q Tripartite ATP-independent periplasmic transporters, DctQ component HGDHCNMN_03921 522306.CAP2UW1_0555 1e-207 729.6 unclassified Betaproteobacteria dctM Bacteria 1KQ9H@119066,1R4MZ@1224,2VHHD@28216,COG4664@1,COG4664@2 NA|NA|NA Q Tripartite ATP-independent periplasmic transporter, DctM component HGDHCNMN_03922 1238450.VIBNISOn1_30184 4.4e-69 268.5 Vibrionales dgcB 2.7.7.65 ko:K07216,ko:K13590 ko04112,map04112 ko00000,ko00001,ko01000 Bacteria 1NC00@1224,1RR2D@1236,1XVMJ@135623,COG2199@1,COG3706@2 NA|NA|NA T COG2199 FOG GGDEF domain HGDHCNMN_03923 497321.C664_18484 9.6e-157 559.7 Rhodocyclales pyrC GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVXY@1224,2KUQS@206389,2VH1E@28216,COG0044@1,COG0044@2 NA|NA|NA F COG0044 Dihydroorotase and related cyclic amidohydrolases HGDHCNMN_03924 1353528.DT23_12630 3e-25 120.9 Thioclava MA20_11245 Bacteria 1RGVA@1224,2AMHV@1,2U98Q@28211,2XNNC@285107,31CDG@2 NA|NA|NA S Protein of unknown function (DUF1153) HGDHCNMN_03925 1105367.CG50_03870 1e-175 622.9 Alphaproteobacteria mnmA 2.8.1.13 ko:K00566 ko04122,map04122 R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 Bacteria 1MUT1@1224,2TQU7@28211,COG0482@1,COG0482@2 NA|NA|NA J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 HGDHCNMN_03926 420662.Mpe_A2119 7.2e-37 159.8 unclassified Burkholderiales pqqL ko:K07263 ko00000,ko01000,ko01002 Bacteria 1KJ2V@119065,1MVST@1224,2VHVB@28216,COG0612@1,COG0612@2 NA|NA|NA S Insulinase (Peptidase family M16) HGDHCNMN_03927 305700.B447_16522 6.4e-54 217.6 Rhodocyclales cysZ GO:0000096,GO:0000097,GO:0000103,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0008150,GO:0008152,GO:0008271,GO:0008272,GO:0008324,GO:0008509,GO:0008512,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009675,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015103,GO:0015116,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015296,GO:0015318,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0016053,GO:0019344,GO:0019752,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044425,GO:0044459,GO:0044464,GO:0046394,GO:0051179,GO:0051234,GO:0055085,GO:0071704,GO:0071944,GO:0072348,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901682,GO:1902358,GO:1902600 ko:K06203 ko00000 iJR904.b2413,iYL1228.KPN_02760 Bacteria 1Q181@1224,2KVWN@206389,2VN29@28216,COG2981@1,COG2981@2 NA|NA|NA E Etoposide-induced protein 2.4 (EI24) HGDHCNMN_03928 522306.CAP2UW1_0034 2.4e-45 189.1 Betaproteobacteria 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 Bacteria 1RJBG@1224,2VS51@28216,COG0860@1,COG0860@2 NA|NA|NA M Cell wall hydrolase autolysin HGDHCNMN_03929 857087.Metme_0345 3.2e-33 149.1 Proteobacteria Bacteria 1QY0H@1224,COG1262@1,COG1262@2 NA|NA|NA S TIR domain HGDHCNMN_03930 1123487.KB892864_gene2129 4.8e-43 181.8 Rhodocyclales ko:K09973 ko00000 Bacteria 1MVCW@1224,2KXHH@206389,2WA5U@28216,COG3735@1,COG3735@2 NA|NA|NA S TraB family HGDHCNMN_03931 62928.azo3131 9.9e-124 449.9 Rhodocyclales miaA GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0008033,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016070,GO:0016740,GO:0016765,GO:0019222,GO:0031323,GO:0031326,GO:0032268,GO:0033554,GO:0034248,GO:0034470,GO:0034605,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0043555,GO:0044237,GO:0044238,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0051716,GO:0052381,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1990497,GO:2000112,GO:2000765 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 Bacteria 1MUB2@1224,2KUD4@206389,2VHEP@28216,COG0324@1,COG0324@2 NA|NA|NA J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) HGDHCNMN_03932 62928.azo3617 2.4e-26 125.9 Rhodocyclales Bacteria 1RKQX@1224,2KWRW@206389,2VT6J@28216,COG5126@1,COG5126@2 NA|NA|NA DTZ EF-hand domain pair HGDHCNMN_03934 62928.azo2079 3.9e-124 451.1 Rhodocyclales nadC 2.4.2.19 ko:K00767,ko:K03813 ko00760,ko01100,map00760,map01100 M00115 R03348 RC02877 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW0C@1224,2KVHJ@206389,2VHSU@28216,COG0157@1,COG0157@2 NA|NA|NA H Belongs to the NadC ModD family HGDHCNMN_03936 305700.B447_02743 5.3e-34 151.8 Betaproteobacteria Bacteria 1N1HC@1224,2E0BU@1,2W3PB@28216,32VYY@2 NA|NA|NA HGDHCNMN_03937 1454004.AW11_00563 1.5e-13 81.6 unclassified Betaproteobacteria slyX ko:K03745 ko00000 Bacteria 1KR52@119066,1NGFM@1224,2VW0H@28216,COG2900@1,COG2900@2 NA|NA|NA S SlyX HGDHCNMN_03938 159087.Daro_4162 5.7e-89 334.0 Rhodocyclales comB GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 ko:K05979 ko00680,ko01120,map00680,map01120 M00358 R05789 RC00428 ko00000,ko00001,ko00002,ko01000 Bacteria 1N3KG@1224,2KWE8@206389,2VR4U@28216,COG2045@1,COG2045@2 NA|NA|NA H 2-phosphosulpholactate phosphatase HGDHCNMN_03939 1304883.KI912532_gene1280 4e-125 454.5 Rhodocyclales terC ko:K05794 ko00000 Bacteria 1MUNR@1224,2KURI@206389,2VJB9@28216,COG0861@1,COG0861@2 NA|NA|NA P membrane protein, TerC HGDHCNMN_03942 1304883.KI912532_gene2949 3.4e-90 338.2 Betaproteobacteria Bacteria 1R5Q0@1224,2B47E@1,2VT47@28216,31WYM@2 NA|NA|NA HGDHCNMN_03943 1288494.EBAPG3_2120 2e-45 188.7 Nitrosomonadales Bacteria 1RDIA@1224,2VR6J@28216,3737R@32003,COG1132@1,COG1132@2 NA|NA|NA V Domain of unknown function (DUF1854) HGDHCNMN_03944 983917.RGE_40130 3.2e-146 524.6 unclassified Burkholderiales mdlB ko:K06147,ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1KKC9@119065,1MUBM@1224,2VHAN@28216,COG1132@1,COG1132@2 NA|NA|NA P ABC-type multidrug transport system, ATPase and permease HGDHCNMN_03946 62928.azo3086 3.4e-17 94.0 Bacteria Bacteria COG4309@1,COG4309@2 NA|NA|NA D conserved protein (DUF2249) HGDHCNMN_03947 1123367.C666_13665 2.5e-76 292.0 Rhodocyclales ko:K01420,ko:K21563 ko00000,ko03000 Bacteria 1R5P7@1224,2KUQN@206389,2VIQI@28216,COG0664@1,COG0664@2 NA|NA|NA K Crp Fnr family transcriptional regulator HGDHCNMN_03948 76114.ebA5142 3.4e-95 355.5 Rhodocyclales ko:K07234 ko00000 Bacteria 1MUJK@1224,2KWCJ@206389,2VJ75@28216,COG3213@1,COG3213@2 NA|NA|NA P NnrS protein HGDHCNMN_03949 765914.ThisiDRAFT_1172 1.4e-195 690.3 Chromatiales Bacteria 1MU2C@1224,1RM8A@1236,1WXCR@135613,COG3290@1,COG3290@2,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase HGDHCNMN_03950 62928.azo0029 5.9e-103 380.6 Rhodocyclales terC Bacteria 1MWC9@1224,2KUK4@206389,2VJSY@28216,COG0861@1,COG0861@2 NA|NA|NA P Integral membrane protein TerC family HGDHCNMN_03951 204773.HEAR0880 1.8e-133 482.3 Oxalobacteraceae srkA GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564 Bacteria 1MU2Q@1224,2VI9A@28216,4730X@75682,COG2334@1,COG2334@2 NA|NA|NA F A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response HGDHCNMN_03952 748247.AZKH_2072 2.6e-51 208.4 Rhodocyclales Bacteria 1NBCJ@1224,2EE9F@1,2KYNR@206389,2VW04@28216,3383V@2 NA|NA|NA HGDHCNMN_03953 62928.azo2130 1e-126 459.5 Rhodocyclales fabI 1.3.1.10,1.3.1.9 ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 M00083,M00572 R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671 RC00052,RC00076,RC00120 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1MV05@1224,2KUCD@206389,2VJQ0@28216,COG0623@1,COG0623@2 NA|NA|NA I Enoyl- acyl-carrier-protein reductase NADH HGDHCNMN_03954 85643.Tmz1t_1673 2.1e-60 238.8 Rhodocyclales Bacteria 1RCWS@1224,29SYG@1,2KWCZ@206389,2VRTG@28216,30E4V@2 NA|NA|NA HGDHCNMN_03955 1095769.CAHF01000003_gene1022 5.7e-71 274.2 Betaproteobacteria Bacteria 1MWR2@1224,2VQAV@28216,COG0726@1,COG0726@2 NA|NA|NA G polysaccharide deacetylase HGDHCNMN_03956 1095769.CAHF01000003_gene1023 1.6e-93 349.7 Bacteria Bacteria COG0297@1,COG0297@2 NA|NA|NA G glycogen (starch) synthase activity HGDHCNMN_03957 748247.AZKH_0594 7.5e-118 430.3 Rhodocyclales ko:K00754 ko00000,ko01000 GT4 Bacteria 1MU9C@1224,2KWP5@206389,2VIBU@28216,COG0438@1,COG0438@2 NA|NA|NA M Glycosyltransferase Family 4 # 3565 queries scanned # Total time (seconds): 65.5691230297 # Rate: 54.37 q/s